gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 272 |
| AclWI | GGATC | 2 cut(s) | 193, 264 |
| AfaI | GTAC | 1 cut(s) | 262 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 212 |
| AgsI | TTSAA | 2 cut(s) | 155, 250 |
| AluBI | AGCT | 2 cut(s) | 233, 284 |
| AluI | AGCT | 2 cut(s) | 233, 284 |
| AlwI | GGATC | 2 cut(s) | 193, 264 |
| AsuHPI | GGTGA | 2 cut(s) | 97, 130 |
| AsuNHI | GCTAGC | 1 cut(s) | 83 |
| BccI | CCATC | 1 cut(s) | 176 |
| BceAI | ACGGC | 1 cut(s) | 178 |
| BfaI | CTAG | 1 cut(s) | 84 |
| BfmI | CTRYAG | 1 cut(s) | 265 |
| BfuAI | ACCTGC | 1 cut(s) | 272 |
| BmtI | GCTAGC | 1 cut(s) | 87 |
| BpmI | CTGGAG | 1 cut(s) | 42 |
| BpuEI | CTTGAG | 1 cut(s) | 204 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 184, 214 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 212 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 1 cut(s) | 187 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 212 |
| BseRI | GAGGAG | 1 cut(s) | 189 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 212 |
| Bsp143I | GATC | 2 cut(s) | 185, 256 |
| BspMAI | CTGCAG | 1 cut(s) | 269 |
| BspMI | ACCTGC | 1 cut(s) | 272 |
| BspOI | GCTAGC | 1 cut(s) | 87 |
| BspPI | GGATC | 2 cut(s) | 193, 264 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssMI | GATC | 2 cut(s) | 185, 256 |
| BssT1I | CCWWGG | 1 cut(s) | 144 |
| Bst6I | CTCTTC | 1 cut(s) | 31 |
| BstC8I | GCNNGC | 1 cut(s) | 85 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 210 |
| BstF5I | GGATG | 1 cut(s) | 187 |
| BstKTI | GATC | 2 cut(s) | 188, 259 |
| BstMBI | GATC | 2 cut(s) | 185, 256 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 171, 230 |
| BstNSI | RCATGY | 1 cut(s) | 169 |
| BstSFI | CTRYAG | 1 cut(s) | 265 |
| BstX2I | RGATCY | 1 cut(s) | 185 |
| BstYI | RGATCY | 1 cut(s) | 185 |
| BtsCI | GGATG | 1 cut(s) | 187 |
| BveI | ACCTGC | 1 cut(s) | 272 |
| Cac8I | GCNNGC | 1 cut(s) | 85 |
| Csp6I | GTAC | 1 cut(s) | 261 |
| CviAII | CATG | 2 cut(s) | 77, 166 |
| CviJI | RGCY | 7 cut(s) | 43, 87, 174, 224, 233, 277, 284 |
| CviKI_1 | RGCY | 7 cut(s) | 43, 87, 174, 224, 233, 277, 284 |
| CviQI | GTAC | 1 cut(s) | 261 |
| DpnI | GATC | 2 cut(s) | 187, 258 |
| DpnII | GATC | 2 cut(s) | 185, 256 |
| Eam1104I | CTCTTC | 1 cut(s) | 31 |
| EarI | CTCTTC | 1 cut(s) | 31 |
| Eco130I | CCWWGG | 1 cut(s) | 144 |
| Eco32I | GATATC | 1 cut(s) | 136 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 210 |
| EcoRV | GATATC | 1 cut(s) | 136 |
| EcoT14I | CCWWGG | 1 cut(s) | 144 |
| ErhI | CCWWGG | 1 cut(s) | 144 |
| FaeI | CATG | 2 cut(s) | 80, 169 |
| FaiI | YATR | 4 cut(s) | 78, 167, 171, 212 |
| FatI | CATG | 2 cut(s) | 76, 165 |
| FokI | GGATG | 1 cut(s) | 194 |
| FspBI | CTAG | 1 cut(s) | 84 |
| GsuI | CTGGAG | 1 cut(s) | 42 |
| Hin1II | CATG | 2 cut(s) | 80, 169 |
| HphI | GGTGA | 2 cut(s) | 97, 130 |
| Hpy188I | TCNGA | 2 cut(s) | 190, 295 |
| Hpy188III | TCNNGA | 1 cut(s) | 59 |
| HpyAV | CCTTC | 2 cut(s) | 54, 124 |
| HpyCH4V | TGCA | 1 cut(s) | 267 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 171, 230 |
| Hsp92II | CATG | 2 cut(s) | 80, 169 |
| Kzo9I | GATC | 2 cut(s) | 185, 256 |
| LmnI | GCTCC | 1 cut(s) | 73 |
| LpnPI | CCDG | 4 cut(s) | 24, 72, 243, 277 |
| MaeI | CTAG | 1 cut(s) | 84 |
| MalI | GATC | 2 cut(s) | 187, 258 |
| MboI | GATC | 2 cut(s) | 185, 256 |
| MboII | GAAGA | 3 cut(s) | 18, 113, 143 |
| MflI | RGATCY | 1 cut(s) | 185 |
| MluCI | AATT | 2 cut(s) | 63, 115 |
| MnlI | CCTC | 6 cut(s) | 43, 105, 205, 210, 216, 299 |
| MseI | TTAA | 1 cut(s) | 6 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 171, 230 |
| NdeII | GATC | 2 cut(s) | 185, 256 |
| NheI | GCTAGC | 1 cut(s) | 83 |
| NlaIII | CATG | 2 cut(s) | 80, 169 |
| NspI | RCATGY | 1 cut(s) | 169 |
| PstI | CTGCAG | 1 cut(s) | 269 |
| PsuI | RGATCY | 1 cut(s) | 185 |
| RsaI | GTAC | 1 cut(s) | 262 |
| RsaNI | GTAC | 1 cut(s) | 261 |
| SaqAI | TTAA | 1 cut(s) | 6 |
| Sau3AI | GATC | 2 cut(s) | 185, 256 |
| SetI | ASST | 8 cut(s) | 35, 146, 197, 208, 235, 266, 286, 301 |
| SfcI | CTRYAG | 1 cut(s) | 265 |
| SmlI | CTYRAG | 1 cut(s) | 219 |
| SmoI | CTYRAG | 1 cut(s) | 219 |
| Sse9I | AATT | 2 cut(s) | 63, 115 |
| SspMI | CTAG | 1 cut(s) | 84 |
| StyI | CCWWGG | 1 cut(s) | 144 |
| TasI | AATT | 2 cut(s) | 63, 115 |
| Tru1I | TTAA | 1 cut(s) | 6 |
| Tru9I | TTAA | 1 cut(s) | 6 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 210 |
| XceI | RCATGY | 1 cut(s) | 169 |
| XspI | CTAG | 1 cut(s) | 84 |