lipid metabolic process
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 34 - 131 | 1.3e-10 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 154, 199 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 1 cut(s) | 320 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 181, 182 |
| AgsI | TTSAA | 1 cut(s) | 232 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 180, 212 |
| AluBI | AGCT | 2 cut(s) | 45, 391 |
| AluI | AGCT | 2 cut(s) | 45, 391 |
| AoxI | GGCC | 2 cut(s) | 3, 184 |
| ApeKI | GCWGC | 1 cut(s) | 388 |
| AspLEI | GCGC | 1 cut(s) | 342 |
| AspS9I | GGNCC | 1 cut(s) | 184 |
| AsuHPI | GGTGA | 1 cut(s) | 253 |
| AsuII | TTCGAA | 1 cut(s) | 306 |
| BalI | TGGCCA | 1 cut(s) | 5 |
| BbsI | GAAGAC | 2 cut(s) | 243, 326 |
| BccI | CCATC | 2 cut(s) | 163, 170 |
| BfaI | CTAG | 1 cut(s) | 74 |
| BfoI | RGCGCY | 1 cut(s) | 343 |
| BfuAI | ACCTGC | 2 cut(s) | 154, 199 |
| BisI | GCNGC | 1 cut(s) | 389 |
| BlsI | GCNGC | 1 cut(s) | 390 |
| BmgT120I | GGNCC | 1 cut(s) | 184 |
| BpiI | GAAGAC | 2 cut(s) | 243, 326 |
| Bpu14I | TTCGAA | 1 cut(s) | 306 |
| BsaJI | CCNNGG | 1 cut(s) | 315 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 181, 182 |
| Bse1I | ACTGG | 1 cut(s) | 366 |
| Bse3DI | GCAATG | 1 cut(s) | 118 |
| BseDI | CCNNGG | 1 cut(s) | 315 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 181, 182 |
| BseMI | GCAATG | 1 cut(s) | 118 |
| BseMII | CTCAG | 1 cut(s) | 171 |
| BseNI | ACTGG | 1 cut(s) | 366 |
| BseYI | CCCAGC | 1 cut(s) | 211 |
| BshFI | GGCC | 2 cut(s) | 5, 186 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 181, 182 |
| BsnI | GGCC | 2 cut(s) | 5, 186 |
| Bsp119I | TTCGAA | 1 cut(s) | 306 |
| Bsp143I | GATC | 1 cut(s) | 115 |
| BspANI | GGCC | 2 cut(s) | 5, 186 |
| BspCNI | CTCAG | 1 cut(s) | 172 |
| BspMI | ACCTGC | 2 cut(s) | 154, 199 |
| BspT104I | TTCGAA | 1 cut(s) | 306 |
| BsrDI | GCAATG | 1 cut(s) | 118 |
| BsrI | ACTGG | 1 cut(s) | 366 |
| BssECI | CCNNGG | 1 cut(s) | 315 |
| BssMI | GATC | 1 cut(s) | 115 |
| BssT1I | CCWWGG | 1 cut(s) | 315 |
| Bst4CI | ACNGT | 1 cut(s) | 137 |
| Bst6I | CTCTTC | 1 cut(s) | 31 |
| BstBI | TTCGAA | 1 cut(s) | 306 |
| BstDEI | CTNAG | 1 cut(s) | 180 |
| BstH2I | RGCGCY | 1 cut(s) | 343 |
| BstHHI | GCGC | 1 cut(s) | 342 |
| BstKTI | GATC | 1 cut(s) | 118 |
| BstMBI | GATC | 1 cut(s) | 115 |
| BstV2I | GAAGAC | 2 cut(s) | 243, 326 |
| BsuRI | GGCC | 2 cut(s) | 5, 186 |
| BtsI | GCAGTG | 1 cut(s) | 12 |
| BtsIMutI | CAGTG | 4 cut(s) | 12, 57, 273, 373 |
| BveI | ACCTGC | 2 cut(s) | 154, 199 |
| CfoI | GCGC | 1 cut(s) | 342 |
| Cfr13I | GGNCC | 1 cut(s) | 184 |
| CviAII | CATG | 1 cut(s) | 166 |
| CviJI | RGCY | 6 cut(s) | 5, 45, 82, 186, 215, 391 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 45, 82, 186, 215, 391 |
| DdeI | CTNAG | 1 cut(s) | 180 |
| DpnI | GATC | 1 cut(s) | 117 |
| DpnII | GATC | 1 cut(s) | 115 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 31 |
| EarI | CTCTTC | 1 cut(s) | 31 |
| Eco130I | CCWWGG | 1 cut(s) | 315 |
| Eco57I | CTGAAG | 1 cut(s) | 320 |
| EcoT14I | CCWWGG | 1 cut(s) | 315 |
| ErhI | CCWWGG | 1 cut(s) | 315 |
| FaeI | CATG | 1 cut(s) | 169 |
| FaiI | YATR | 2 cut(s) | 129, 167 |
| FatI | CATG | 1 cut(s) | 165 |
| Fnu4HI | GCNGC | 1 cut(s) | 389 |
| Fsp4HI | GCNGC | 1 cut(s) | 389 |
| FspBI | CTAG | 1 cut(s) | 74 |
| GlaI | GCGC | 1 cut(s) | 341 |
| GluI | GCNGC | 1 cut(s) | 389 |
| GsaI | CCCAGC | 1 cut(s) | 215 |
| HaeII | RGCGCY | 1 cut(s) | 343 |
| HaeIII | GGCC | 2 cut(s) | 5, 186 |
| HhaI | GCGC | 1 cut(s) | 342 |
| Hin1II | CATG | 1 cut(s) | 169 |
| Hin6I | GCGC | 1 cut(s) | 340 |
| HinP1I | GCGC | 1 cut(s) | 340 |
| HincII | GTYRAC | 1 cut(s) | 133 |
| HindII | GTYRAC | 1 cut(s) | 133 |
| HphI | GGTGA | 1 cut(s) | 253 |
| Hpy166II | GTNNAC | 2 cut(s) | 133, 171 |
| Hpy188I | TCNGA | 1 cut(s) | 181 |
| Hpy8I | GTNNAC | 2 cut(s) | 133, 171 |
| HpyCH4III | ACNGT | 1 cut(s) | 137 |
| HpyCH4V | TGCA | 1 cut(s) | 388 |
| HpyF3I | CTNAG | 1 cut(s) | 180 |
| Hsp92II | CATG | 1 cut(s) | 169 |
| HspAI | GCGC | 1 cut(s) | 340 |
| Kzo9I | GATC | 1 cut(s) | 115 |
| LmnI | GCTCC | 1 cut(s) | 154 |
| LpnPI | CCDG | 6 cut(s) | 55, 106, 159, 204, 225, 379 |
| MaeI | CTAG | 1 cut(s) | 74 |
| MalI | GATC | 1 cut(s) | 117 |
| MboI | GATC | 1 cut(s) | 115 |
| MboII | GAAGA | 4 cut(s) | 12, 18, 248, 326 |
| MfeI | CAATTG | 1 cut(s) | 297 |
| MlsI | TGGCCA | 1 cut(s) | 5 |
| MluCI | AATT | 1 cut(s) | 297 |
| MluNI | TGGCCA | 1 cut(s) | 5 |
| MnlI | CCTC | 8 cut(s) | 34, 113, 175, 187, 281, 322, 382, 389 |
| Mox20I | TGGCCA | 1 cut(s) | 5 |
| MscI | TGGCCA | 1 cut(s) | 5 |
| Msp20I | TGGCCA | 1 cut(s) | 5 |
| MunI | CAATTG | 1 cut(s) | 297 |
| NdeII | GATC | 1 cut(s) | 115 |
| NlaIII | CATG | 1 cut(s) | 169 |
| NspV | TTCGAA | 1 cut(s) | 306 |
| PkrI | GCNGC | 1 cut(s) | 390 |
| PspFI | CCCAGC | 1 cut(s) | 211 |
| PspPI | GGNCC | 1 cut(s) | 184 |
| SatI | GCNGC | 1 cut(s) | 389 |
| Sau3AI | GATC | 1 cut(s) | 115 |
| Sau96I | GGNCC | 1 cut(s) | 184 |
| SetI | ASST | 7 cut(s) | 47, 100, 105, 148, 193, 314, 393 |
| SfuI | TTCGAA | 1 cut(s) | 306 |
| SgeI | CNNG | 9 cut(s) | 54, 86, 133, 158, 178, 203, 224, 328, 378 |
| Sse9I | AATT | 1 cut(s) | 297 |
| SspI | AATATT | 1 cut(s) | 283 |
| SspMI | CTAG | 1 cut(s) | 74 |
| StyI | CCWWGG | 1 cut(s) | 315 |
| TaaI | ACNGT | 1 cut(s) | 137 |
| TaqI | TCGA | 1 cut(s) | 306 |
| TasI | AATT | 1 cut(s) | 297 |
| TscAI | CASTG | 4 cut(s) | 19, 64, 280, 373 |
| TseI | GCWGC | 1 cut(s) | 388 |
| TspGWI | ACGGA | 1 cut(s) | 386 |
| TspRI | CASTG | 4 cut(s) | 19, 64, 280, 373 |
| XspI | CTAG | 1 cut(s) | 74 |