Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 377 |
| Acc36I | ACCTGC | 1 cut(s) | 377 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 995 |
| AccBSI | CCGCTC | 1 cut(s) | 915 |
| AccI | GTMKAC | 1 cut(s) | 953 |
| AciI | CCGC | 3 cut(s) | 118, 465, 913 |
| AclI | AACGTT | 1 cut(s) | 435 |
| AcoI | YGGCCR | 2 cut(s) | 679, 775 |
| AdeI | CACNNNGTG | 1 cut(s) | 773 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 421, 605, 627, 770, 995 |
| AgsI | TTSAA | 4 cut(s) | 290, 656, 664, 743 |
| AjiI | CACGTC | 1 cut(s) | 81 |
| AluBI | AGCT | 6 cut(s) | 129, 253, 476, 580, 692, 834 |
| AluI | AGCT | 6 cut(s) | 129, 253, 476, 580, 692, 834 |
| Alw26I | GTCTC | 3 cut(s) | 62, 210, 738 |
| AoxI | GGCC | 6 cut(s) | 183, 535, 592, 647, 679, 775 |
| ApeKI | GCWGC | 1 cut(s) | 689 |
| AspA2I | CCTAGG | 1 cut(s) | 644 |
| AspS9I | GGNCC | 2 cut(s) | 238, 593 |
| AvaII | GGWCC | 1 cut(s) | 238 |
| AvrII | CCTAGG | 1 cut(s) | 644 |
| BalI | TGGCCA | 2 cut(s) | 681, 777 |
| BauI | CACGAG | 1 cut(s) | 477 |
| BbsI | GAAGAC | 2 cut(s) | 275, 731 |
| BbvI | GCAGC | 1 cut(s) | 701 |
| BccI | CCATC | 5 cut(s) | 341, 415, 497, 786, 997 |
| BceAI | ACGGC | 1 cut(s) | 154 |
| BcoDI | GTCTC | 3 cut(s) | 62, 210, 738 |
| BfaI | CTAG | 2 cut(s) | 30, 645 |
| BfuAI | ACCTGC | 1 cut(s) | 377 |
| BisI | GCNGC | 2 cut(s) | 465, 690 |
| BlnI | CCTAGG | 1 cut(s) | 644 |
| BlpI | GCTNAGC | 1 cut(s) | 125 |
| BlsI | GCNGC | 2 cut(s) | 466, 691 |
| Bme18I | GGWCC | 1 cut(s) | 238 |
| BmgBI | CACGTC | 1 cut(s) | 81 |
| BmgT120I | GGNCC | 2 cut(s) | 238, 593 |
| BmiI | GGNNCC | 1 cut(s) | 239 |
| BmsI | GCATC | 3 cut(s) | 120, 499, 793 |
| BpiI | GAAGAC | 2 cut(s) | 275, 731 |
| Bpu10I | CCTNAGC | 2 cut(s) | 180, 830 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 125 |
| BpuEI | CTTGAG | 2 cut(s) | 44, 456 |
| BsaBI | GATNNNNATC | 1 cut(s) | 72 |
| BsaJI | CCNNGG | 2 cut(s) | 644, 934 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 421, 605, 627, 770, 995 |
| Bse3DI | GCAATG | 1 cut(s) | 459 |
| Bse8I | GATNNNNATC | 1 cut(s) | 72 |
| BseDI | CCNNGG | 2 cut(s) | 644, 934 |
| BseGI | GGATG | 1 cut(s) | 940 |
| BseJI | GATNNNNATC | 1 cut(s) | 72 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 421, 605, 627, 770, 995 |
| BseMI | GCAATG | 1 cut(s) | 459 |
| BseMII | CTCAG | 3 cut(s) | 139, 572, 821 |
| BseRI | GAGGAG | 3 cut(s) | 200, 506, 717 |
| BseXI | GCAGC | 1 cut(s) | 701 |
| BshFI | GGCC | 6 cut(s) | 185, 537, 594, 649, 681, 777 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 421, 605, 627, 770, 995 |
| BsmAI | GTCTC | 3 cut(s) | 62, 210, 738 |
| BsmBI | CGTCTC | 1 cut(s) | 62 |
| BsnI | GGCC | 6 cut(s) | 185, 537, 594, 649, 681, 777 |
| Bsp143I | GATC | 3 cut(s) | 349, 409, 502 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 125 |
| BspACI | CCGC | 3 cut(s) | 118, 465, 913 |
| BspANI | GGCC | 6 cut(s) | 185, 537, 594, 649, 681, 777 |
| BspCNI | CTCAG | 3 cut(s) | 138, 573, 822 |
| BspLI | GGNNCC | 1 cut(s) | 239 |
| BspMI | ACCTGC | 1 cut(s) | 377 |
| BspQI | GCTCTTC | 1 cut(s) | 1006 |
| BsrBI | CCGCTC | 1 cut(s) | 915 |
| BsrDI | GCAATG | 1 cut(s) | 459 |
| BssECI | CCNNGG | 2 cut(s) | 644, 934 |
| BssMI | GATC | 3 cut(s) | 349, 409, 502 |
| BssSI | CACGAG | 1 cut(s) | 477 |
| BssT1I | CCWWGG | 2 cut(s) | 644, 934 |
| Bst2BI | CACGAG | 1 cut(s) | 477 |
| Bst4CI | ACNGT | 3 cut(s) | 299, 786, 855 |
| Bst6I | CTCTTC | 2 cut(s) | 657, 1006 |
| BstC8I | GCNNGC | 2 cut(s) | 87, 122 |
| BstDEI | CTNAG | 4 cut(s) | 125, 180, 581, 830 |
| BstF5I | GGATG | 1 cut(s) | 940 |
| BstKTI | GATC | 3 cut(s) | 352, 412, 505 |
| BstMAI | GTCTC | 3 cut(s) | 62, 210, 738 |
| BstMBI | GATC | 3 cut(s) | 349, 409, 502 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 117, 126, 398, 473 |
| BstV1I | GCAGC | 1 cut(s) | 701 |
| BstV2I | GAAGAC | 2 cut(s) | 275, 731 |
| BsuRI | GGCC | 6 cut(s) | 185, 537, 594, 649, 681, 777 |
| BtgZI | GCGATG | 1 cut(s) | 670 |
| BtrI | CACGTC | 1 cut(s) | 81 |
| BtsCI | GGATG | 1 cut(s) | 940 |
| BtsIMutI | CAGTG | 3 cut(s) | 336, 791, 1026 |
| BveI | ACCTGC | 1 cut(s) | 377 |
| Cac8I | GCNNGC | 2 cut(s) | 87, 122 |
| Cfr13I | GGNCC | 2 cut(s) | 238, 593 |
| CviAII | CATG | 4 cut(s) | 41, 671, 770, 860 |
| DdeI | CTNAG | 4 cut(s) | 125, 180, 581, 830 |
| DpnI | GATC | 3 cut(s) | 351, 411, 504 |
| DpnII | GATC | 3 cut(s) | 349, 409, 502 |
| DraIII | CACNNNGTG | 1 cut(s) | 773 |
| EaeI | YGGCCR | 2 cut(s) | 679, 775 |
| Eam1104I | CTCTTC | 2 cut(s) | 657, 1006 |
| EarI | CTCTTC | 2 cut(s) | 657, 1006 |
| Eco130I | CCWWGG | 2 cut(s) | 644, 934 |
| Eco147I | AGGCCT | 1 cut(s) | 649 |
| Eco47I | GGWCC | 1 cut(s) | 238 |
| EcoT14I | CCWWGG | 2 cut(s) | 644, 934 |
| ErhI | CCWWGG | 2 cut(s) | 644, 934 |
| Esp3I | CGTCTC | 1 cut(s) | 62 |
| FaeI | CATG | 4 cut(s) | 44, 674, 773, 863 |
| FatI | CATG | 4 cut(s) | 40, 670, 769, 859 |
| FblI | GTMKAC | 1 cut(s) | 953 |
| Fnu4HI | GCNGC | 2 cut(s) | 465, 690 |
| FokI | GGATG | 1 cut(s) | 927 |
| Fsp4HI | GCNGC | 2 cut(s) | 465, 690 |
| FspBI | CTAG | 2 cut(s) | 30, 645 |
| GluI | GCNGC | 2 cut(s) | 465, 690 |
| HaeIII | GGCC | 6 cut(s) | 185, 537, 594, 649, 681, 777 |
| Hin1II | CATG | 4 cut(s) | 44, 674, 773, 863 |
| HincII | GTYRAC | 2 cut(s) | 136, 910 |
| HindII | GTYRAC | 2 cut(s) | 136, 910 |
| HinfI | GANTC | 4 cut(s) | 191, 277, 326, 404 |
| Hpy166II | GTNNAC | 3 cut(s) | 136, 910, 954 |
| Hpy188I | TCNGA | 5 cut(s) | 78, 159, 409, 868, 1046 |
| Hpy188III | TCNNGA | 5 cut(s) | 167, 241, 479, 506, 743 |
| Hpy8I | GTNNAC | 3 cut(s) | 136, 910, 954 |
| HpyAV | CCTTC | 6 cut(s) | 116, 548, 612, 711, 732, 774 |
| HpyCH4III | ACNGT | 3 cut(s) | 299, 786, 855 |
| HpyCH4IV | ACGT | 4 cut(s) | 80, 435, 532, 710 |
| HpyCH4V | TGCA | 3 cut(s) | 312, 806, 961 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 117, 126, 398, 473 |
| HpyF3I | CTNAG | 4 cut(s) | 125, 180, 581, 830 |
| HpySE526I | ACGT | 4 cut(s) | 80, 435, 532, 710 |
| Hsp92II | CATG | 4 cut(s) | 44, 674, 773, 863 |
| Kzo9I | GATC | 3 cut(s) | 349, 409, 502 |
| LguI | GCTCTTC | 1 cut(s) | 1006 |
| Lsp1109I | GCAGC | 1 cut(s) | 701 |
| LweI | GCATC | 3 cut(s) | 120, 499, 793 |
| MaeI | CTAG | 2 cut(s) | 30, 645 |
| MaeII | ACGT | 4 cut(s) | 80, 435, 532, 710 |
| MaeIII | GTNAC | 1 cut(s) | 299 |
| MalI | GATC | 3 cut(s) | 351, 411, 504 |
| MbiI | CCGCTC | 1 cut(s) | 915 |
| MboI | GATC | 3 cut(s) | 349, 409, 502 |
| MboII | GAAGA | 8 cut(s) | 275, 278, 321, 644, 731, 984, 993, 1012 |
| MfeI | CAATTG | 1 cut(s) | 664 |
| MlsI | TGGCCA | 2 cut(s) | 681, 777 |
| MluCI | AATT | 5 cut(s) | 70, 93, 664, 962, 983 |
| MluNI | TGGCCA | 2 cut(s) | 681, 777 |
| MlyI | GAGTC | 1 cut(s) | 398 |
| MmeI | TCCRAC | 2 cut(s) | 182, 856 |
| Mox20I | TGGCCA | 2 cut(s) | 681, 777 |
| MscI | TGGCCA | 2 cut(s) | 681, 777 |
| MseI | TTAA | 1 cut(s) | 357 |
| MslI | CAYNNNNRTG | 1 cut(s) | 494 |
| Msp20I | TGGCCA | 2 cut(s) | 681, 777 |
| MspA1I | CMGCKG | 1 cut(s) | 692 |
| MunI | CAATTG | 1 cut(s) | 664 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 117, 126, 398, 473 |
| NdeII | GATC | 3 cut(s) | 349, 409, 502 |
| NlaIII | CATG | 4 cut(s) | 44, 674, 773, 863 |
| NlaIV | GGNNCC | 1 cut(s) | 239 |
| PaqCI | CACCTGC | 1 cut(s) | 377 |
| PceI | AGGCCT | 1 cut(s) | 649 |
| PciSI | GCTCTTC | 1 cut(s) | 1006 |
| PfeI | GAWTC | 3 cut(s) | 191, 277, 326 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 995 |
| PkrI | GCNGC | 2 cut(s) | 466, 691 |
| PleI | GAGTC | 1 cut(s) | 398 |
| PpsI | GAGTC | 1 cut(s) | 398 |
| Psp1406I | AACGTT | 1 cut(s) | 435 |
| PspN4I | GGNNCC | 1 cut(s) | 239 |
| PspPI | GGNCC | 2 cut(s) | 238, 593 |
| PvuII | CAGCTG | 1 cut(s) | 692 |
| RseI | CAYNNNNRTG | 1 cut(s) | 494 |
| SapI | GCTCTTC | 1 cut(s) | 1006 |
| SaqAI | TTAA | 1 cut(s) | 357 |
| SatI | GCNGC | 2 cut(s) | 465, 690 |
| Sau3AI | GATC | 3 cut(s) | 349, 409, 502 |
| Sau96I | GGNCC | 2 cut(s) | 238, 593 |
| SchI | GAGTC | 1 cut(s) | 398 |
| SfaNI | GCATC | 3 cut(s) | 120, 499, 793 |
| SinI | GGWCC | 1 cut(s) | 238 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 494 |
| SmlI | CTYRAG | 2 cut(s) | 59, 471 |
| SmoI | CTYRAG | 2 cut(s) | 59, 471 |
| Sse9I | AATT | 5 cut(s) | 70, 93, 664, 962, 983 |
| SseBI | AGGCCT | 1 cut(s) | 649 |
| SsiI | CCGC | 3 cut(s) | 118, 465, 913 |
| SspMI | CTAG | 2 cut(s) | 30, 645 |
| StuI | AGGCCT | 1 cut(s) | 649 |
| StyI | CCWWGG | 2 cut(s) | 644, 934 |
| TaaI | ACNGT | 3 cut(s) | 299, 786, 855 |
| TaiI | ACGT | 4 cut(s) | 83, 438, 535, 713 |
| TaqI | TCGA | 2 cut(s) | 362, 576 |
| TasI | AATT | 5 cut(s) | 70, 93, 664, 962, 983 |
| TauI | GCSGC | 1 cut(s) | 467 |
| TfiI | GAWTC | 3 cut(s) | 191, 277, 326 |
| Tru1I | TTAA | 1 cut(s) | 357 |
| Tru9I | TTAA | 1 cut(s) | 357 |
| TscAI | CASTG | 3 cut(s) | 343, 791, 1033 |
| TseI | GCWGC | 1 cut(s) | 689 |
| TspDTI | ATGAA | 5 cut(s) | 26, 204, 443, 465, 623 |
| TspRI | CASTG | 3 cut(s) | 343, 791, 1033 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 995 |
| VpaK11BI | GGWCC | 1 cut(s) | 238 |
| XmaJI | CCTAGG | 1 cut(s) | 644 |
| XmiI | GTMKAC | 1 cut(s) | 953 |
| XspI | CTAG | 2 cut(s) | 30, 645 |