gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 146 |
| AclWI | GGATC | 1 cut(s) | 87 |
| AcsI | RAATTY | 2 cut(s) | 311, 498 |
| AcuI | CTGAAG | 1 cut(s) | 561 |
| AfaI | GTAC | 1 cut(s) | 370 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 201 |
| AgsI | TTSAA | 4 cut(s) | 47, 225, 260, 272 |
| AjnI | CCWGG | 2 cut(s) | 75, 589 |
| AluBI | AGCT | 3 cut(s) | 263, 553, 581 |
| AluI | AGCT | 3 cut(s) | 263, 553, 581 |
| Alw21I | GWGCWC | 1 cut(s) | 514 |
| Alw26I | GTCTC | 4 cut(s) | 154, 246, 299, 731 |
| AlwI | GGATC | 1 cut(s) | 87 |
| ApeKI | GCWGC | 1 cut(s) | 659 |
| ApoI | RAATTY | 2 cut(s) | 311, 498 |
| AseI | ATTAAT | 1 cut(s) | 690 |
| AsuHPI | GGTGA | 1 cut(s) | 731 |
| BbsI | GAAGAC | 1 cut(s) | 144 |
| Bbv12I | GWGCWC | 1 cut(s) | 514 |
| BbvI | GCAGC | 1 cut(s) | 646 |
| BccI | CCATC | 2 cut(s) | 178, 604 |
| BciT130I | CCWGG | 2 cut(s) | 77, 591 |
| BclI | TGATCA | 1 cut(s) | 100 |
| BcoDI | GTCTC | 4 cut(s) | 154, 246, 299, 731 |
| BisI | GCNGC | 1 cut(s) | 660 |
| BlpI | GCTNAGC | 1 cut(s) | 207 |
| BlsI | GCNGC | 1 cut(s) | 661 |
| Bme1390I | CCNGG | 2 cut(s) | 77, 591 |
| BmrFI | CCNGG | 2 cut(s) | 77, 591 |
| BmsI | GCATC | 1 cut(s) | 364 |
| BpiI | GAAGAC | 1 cut(s) | 144 |
| Bpu10I | CCTNAGC | 1 cut(s) | 492 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 207 |
| BsaI | GGTCTC | 2 cut(s) | 246, 731 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 585, 615 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 201 |
| Bse3DI | GCAATG | 4 cut(s) | 349, 459, 511, 612 |
| BseBI | CCWGG | 2 cut(s) | 77, 591 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BseMI | GCAATG | 4 cut(s) | 349, 459, 511, 612 |
| BseXI | GCAGC | 1 cut(s) | 646 |
| BsiHKAI | GWGCWC | 1 cut(s) | 514 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 201 |
| BsmAI | GTCTC | 4 cut(s) | 154, 246, 299, 731 |
| Bso31I | GGTCTC | 2 cut(s) | 246, 731 |
| Bsp1286I | GDGCHC | 1 cut(s) | 514 |
| Bsp143I | GATC | 2 cut(s) | 79, 100 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 207 |
| BspPI | GGATC | 1 cut(s) | 87 |
| BspTNI | GGTCTC | 2 cut(s) | 246, 731 |
| BsrDI | GCAATG | 4 cut(s) | 349, 459, 511, 612 |
| BssMI | GATC | 2 cut(s) | 79, 100 |
| Bst2UI | CCWGG | 2 cut(s) | 77, 591 |
| Bst6I | CTCTTC | 1 cut(s) | 267 |
| BstDEI | CTNAG | 4 cut(s) | 207, 492, 554, 663 |
| BstKTI | GATC | 2 cut(s) | 82, 103 |
| BstMAI | GTCTC | 4 cut(s) | 154, 246, 299, 731 |
| BstMBI | GATC | 2 cut(s) | 79, 100 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 385 |
| BstNI | CCWGG | 2 cut(s) | 77, 591 |
| BstSCI | CCNGG | 2 cut(s) | 75, 589 |
| BstV1I | GCAGC | 1 cut(s) | 646 |
| BstV2I | GAAGAC | 1 cut(s) | 144 |
| Csp6I | GTAC | 1 cut(s) | 369 |
| CviAII | CATG | 2 cut(s) | 187, 323 |
| CviJI | RGCY | 9 cut(s) | 110, 206, 263, 278, 525, 553, 581, 659, 741 |
| CviKI_1 | RGCY | 9 cut(s) | 110, 206, 263, 278, 525, 553, 581, 659, 741 |
| CviQI | GTAC | 1 cut(s) | 369 |
| DdeI | CTNAG | 4 cut(s) | 207, 492, 554, 663 |
| DpnI | GATC | 2 cut(s) | 81, 102 |
| DpnII | GATC | 2 cut(s) | 79, 100 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 146 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 146 |
| Eam1104I | CTCTTC | 1 cut(s) | 267 |
| EarI | CTCTTC | 1 cut(s) | 267 |
| Eco31I | GGTCTC | 2 cut(s) | 246, 731 |
| Eco57I | CTGAAG | 1 cut(s) | 561 |
| EcoRI | GAATTC | 1 cut(s) | 498 |
| EcoRII | CCWGG | 2 cut(s) | 75, 589 |
| EcoT22I | ATGCAT | 1 cut(s) | 357 |
| FaeI | CATG | 2 cut(s) | 190, 326 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 17, 49, 252, 284 |
| FatI | CATG | 2 cut(s) | 186, 322 |
| FauNDI | CATATG | 2 cut(s) | 126, 375 |
| FbaI | TGATCA | 1 cut(s) | 100 |
| Fnu4HI | GCNGC | 1 cut(s) | 660 |
| Fsp4HI | GCNGC | 1 cut(s) | 660 |
| GluI | GCNGC | 1 cut(s) | 660 |
| Hin1II | CATG | 2 cut(s) | 190, 326 |
| HinfI | GANTC | 2 cut(s) | 59, 121 |
| HphI | GGTGA | 1 cut(s) | 731 |
| Hpy188I | TCNGA | 3 cut(s) | 58, 133, 175 |
| HpyAV | CCTTC | 2 cut(s) | 694, 716 |
| HpyCH4V | TGCA | 7 cut(s) | 336, 355, 388, 409, 459, 464, 478 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 385 |
| HpyF3I | CTNAG | 4 cut(s) | 207, 492, 554, 663 |
| Hsp92II | CATG | 2 cut(s) | 190, 326 |
| Ksp22I | TGATCA | 1 cut(s) | 100 |
| Kzo9I | GATC | 2 cut(s) | 79, 100 |
| LmnI | GCTCC | 1 cut(s) | 509 |
| LpnPI | CCDG | 6 cut(s) | 62, 89, 187, 576, 603, 654 |
| Lsp1109I | GCAGC | 1 cut(s) | 646 |
| LweI | GCATC | 1 cut(s) | 364 |
| MaeIII | GTNAC | 2 cut(s) | 316, 398 |
| MalI | GATC | 2 cut(s) | 81, 102 |
| MboI | GATC | 2 cut(s) | 79, 100 |
| MboII | GAAGA | 5 cut(s) | 100, 149, 149, 284, 689 |
| MhlI | GDGCHC | 1 cut(s) | 514 |
| MluCI | AATT | 7 cut(s) | 144, 219, 233, 311, 498, 559, 691 |
| MnlI | CCTC | 4 cut(s) | 15, 268, 390, 690 |
| Mph1103I | ATGCAT | 1 cut(s) | 357 |
| MseI | TTAA | 3 cut(s) | 20, 236, 690 |
| MslI | CAYNNNNRTG | 1 cut(s) | 423 |
| MspR9I | CCNGG | 2 cut(s) | 77, 591 |
| MvaI | CCWGG | 2 cut(s) | 77, 591 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 385 |
| NdeI | CATATG | 2 cut(s) | 126, 375 |
| NdeII | GATC | 2 cut(s) | 79, 100 |
| NlaIII | CATG | 2 cut(s) | 190, 326 |
| NmuCI | GTSAC | 1 cut(s) | 316 |
| NsiI | ATGCAT | 1 cut(s) | 357 |
| PfeI | GAWTC | 2 cut(s) | 59, 121 |
| PkrI | GCNGC | 1 cut(s) | 661 |
| PshBI | ATTAAT | 1 cut(s) | 690 |
| Psp6I | CCWGG | 2 cut(s) | 75, 589 |
| PspGI | CCWGG | 2 cut(s) | 75, 589 |
| RsaI | GTAC | 1 cut(s) | 370 |
| RsaNI | GTAC | 1 cut(s) | 369 |
| RseI | CAYNNNNRTG | 1 cut(s) | 423 |
| SaqAI | TTAA | 3 cut(s) | 20, 236, 690 |
| SatI | GCNGC | 1 cut(s) | 660 |
| Sau3AI | GATC | 2 cut(s) | 79, 100 |
| ScrFI | CCNGG | 2 cut(s) | 77, 591 |
| SduI | GDGCHC | 1 cut(s) | 514 |
| SetI | ASST | 9 cut(s) | 78, 242, 265, 451, 485, 555, 583, 721, 727 |
| SfaNI | GCATC | 1 cut(s) | 364 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 423 |
| Sse9I | AATT | 7 cut(s) | 144, 219, 233, 311, 498, 559, 691 |
| StyD4I | CCNGG | 2 cut(s) | 75, 589 |
| TaqI | TCGA | 2 cut(s) | 82, 695 |
| TasI | AATT | 7 cut(s) | 144, 219, 233, 311, 498, 559, 691 |
| TfiI | GAWTC | 2 cut(s) | 59, 121 |
| Tru1I | TTAA | 3 cut(s) | 20, 236, 690 |
| Tru9I | TTAA | 3 cut(s) | 20, 236, 690 |
| TseFI | GTSAC | 1 cut(s) | 316 |
| TseI | GCWGC | 1 cut(s) | 659 |
| Tsp45I | GTSAC | 1 cut(s) | 316 |
| TspDTI | ATGAA | 5 cut(s) | 113, 150, 203, 648, 690 |
| VspI | ATTAAT | 1 cut(s) | 690 |
| XapI | RAATTY | 2 cut(s) | 311, 498 |
| Zsp2I | ATGCAT | 1 cut(s) | 357 |