Belongs to the cytochrome P450 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 2 - 120 | 3.7e-16 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 681, 1346 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 944 |
| AccI | GTMKAC | 1 cut(s) | 1616 |
| AciI | CCGC | 1 cut(s) | 1552 |
| AclWI | GGATC | 2 cut(s) | 1211, 1563 |
| AcsI | RAATTY | 4 cut(s) | 248, 483, 1313, 1621 |
| AcuI | CTGAAG | 1 cut(s) | 981 |
| AfaI | GTAC | 2 cut(s) | 176, 1209 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 944 |
| AgsI | TTSAA | 7 cut(s) | 127, 165, 376, 488, 633, 1023, 1544 |
| AjnI | CCWGG | 1 cut(s) | 1651 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 979, 1011, 1504, 1536 |
| AluBI | AGCT | 7 cut(s) | 212, 416, 644, 908, 1279, 1547, 1607 |
| AluI | AGCT | 7 cut(s) | 212, 416, 644, 908, 1279, 1547, 1607 |
| Alw26I | GTCTC | 1 cut(s) | 1358 |
| AlwI | GGATC | 2 cut(s) | 1211, 1563 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1307 |
| Ama87I | CYCGRG | 1 cut(s) | 639 |
| ApeKI | GCWGC | 3 cut(s) | 131, 554, 1181 |
| ApoI | RAATTY | 4 cut(s) | 248, 483, 1313, 1621 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 475, 507 |
| AseI | ATTAAT | 1 cut(s) | 1200 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1539 |
| AsuHPI | GGTGA | 4 cut(s) | 846, 906, 1079, 1091 |
| AvaI | CYCGRG | 1 cut(s) | 639 |
| AxyI | CCTNAGG | 1 cut(s) | 1395 |
| BbsI | GAAGAC | 1 cut(s) | 260 |
| BbvI | GCAGC | 3 cut(s) | 118, 541, 1168 |
| BccI | CCATC | 3 cut(s) | 1228, 1421, 1556 |
| BceAI | ACGGC | 1 cut(s) | 308 |
| BciT130I | CCWGG | 1 cut(s) | 1653 |
| BclI | TGATCA | 1 cut(s) | 235 |
| BcoDI | GTCTC | 1 cut(s) | 1358 |
| BfaI | CTAG | 5 cut(s) | 468, 975, 1361, 1446, 1526 |
| BfmI | CTRYAG | 3 cut(s) | 21, 709, 1296 |
| BfuAI | ACCTGC | 2 cut(s) | 681, 1346 |
| BglII | AGATCT | 1 cut(s) | 338 |
| BisI | GCNGC | 3 cut(s) | 132, 555, 1182 |
| BlpI | GCTNAGC | 1 cut(s) | 1185 |
| BlsI | GCNGC | 3 cut(s) | 133, 556, 1183 |
| BmcAI | AGTACT | 2 cut(s) | 176, 1209 |
| Bme1390I | CCNGG | 1 cut(s) | 1653 |
| BmeT110I | CYCGRG | 1 cut(s) | 639 |
| BmrFI | CCNGG | 1 cut(s) | 1653 |
| BmsI | GCATC | 5 cut(s) | 16, 232, 449, 817, 1557 |
| BpiI | GAAGAC | 1 cut(s) | 260 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1185 |
| BpuEI | CTTGAG | 2 cut(s) | 65, 1145 |
| Bsa29I | ATCGAT | 1 cut(s) | 205 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 944 |
| Bse118I | RCCGGY | 2 cut(s) | 1058, 1570 |
| Bse1I | ACTGG | 3 cut(s) | 886, 1205, 1536 |
| Bse21I | CCTNAGG | 1 cut(s) | 1395 |
| Bse3DI | GCAATG | 1 cut(s) | 1440 |
| BseBI | CCWGG | 1 cut(s) | 1653 |
| BseCI | ATCGAT | 1 cut(s) | 205 |
| BseGI | GGATG | 2 cut(s) | 1159, 1572 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 944 |
| BseMI | GCAATG | 1 cut(s) | 1440 |
| BseMII | CTCAG | 2 cut(s) | 674, 1176 |
| BseNI | ACTGG | 3 cut(s) | 886, 1205, 1536 |
| BseRI | GAGGAG | 1 cut(s) | 1341 |
| BseXI | GCAGC | 3 cut(s) | 118, 541, 1168 |
| BshVI | ATCGAT | 1 cut(s) | 205 |
| BsiHKCI | CYCGRG | 1 cut(s) | 639 |
| BsiSI | CCGG | 2 cut(s) | 1059, 1571 |
| BslFI | GGGAC | 1 cut(s) | 947 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 944 |
| BsmAI | GTCTC | 1 cut(s) | 1358 |
| BsmFI | GGGAC | 1 cut(s) | 947 |
| BsmI | GAATGC | 1 cut(s) | 877 |
| BsoBI | CYCGRG | 1 cut(s) | 639 |
| Bsp143I | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1185 |
| BspACI | CCGC | 1 cut(s) | 1552 |
| BspCNI | CTCAG | 2 cut(s) | 673, 1177 |
| BspDI | ATCGAT | 1 cut(s) | 205 |
| BspHI | TCATGA | 1 cut(s) | 1558 |
| BspMAI | CTGCAG | 1 cut(s) | 25 |
| BspMI | ACCTGC | 2 cut(s) | 681, 1346 |
| BspPI | GGATC | 2 cut(s) | 1211, 1563 |
| BsrDI | GCAATG | 1 cut(s) | 1440 |
| BsrFI | RCCGGY | 2 cut(s) | 1058, 1570 |
| BsrI | ACTGG | 3 cut(s) | 886, 1205, 1536 |
| BssAI | RCCGGY | 2 cut(s) | 1058, 1570 |
| BssMI | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| Bst2UI | CCWGG | 1 cut(s) | 1653 |
| Bst4CI | ACNGT | 3 cut(s) | 713, 1029, 1079 |
| Bst6I | CTCTTC | 1 cut(s) | 793 |
| BstC8I | GCNNGC | 6 cut(s) | 464, 539, 877, 1132, 1572, 1605 |
| BstDEI | CTNAG | 3 cut(s) | 660, 1185, 1395 |
| BstF5I | GGATG | 2 cut(s) | 1159, 1572 |
| BstKTI | GATC | 7 cut(s) | 205, 238, 341, 1159, 1219, 1270, 1558 |
| BstMAI | GTCTC | 1 cut(s) | 1358 |
| BstMBI | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1406, 1544 |
| BstNI | CCWGG | 1 cut(s) | 1653 |
| BstNSI | RCATGY | 2 cut(s) | 466, 574 |
| BstSCI | CCNGG | 1 cut(s) | 1651 |
| BstSFI | CTRYAG | 3 cut(s) | 21, 709, 1296 |
| BstV1I | GCAGC | 3 cut(s) | 118, 541, 1168 |
| BstV2I | GAAGAC | 1 cut(s) | 260 |
| BstX2I | RGATCY | 2 cut(s) | 338, 1216 |
| BstYI | RGATCY | 2 cut(s) | 338, 1216 |
| Bsu15I | ATCGAT | 1 cut(s) | 205 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1395 |
| BsuTUI | ATCGAT | 1 cut(s) | 205 |
| BtsCI | GGATG | 2 cut(s) | 1159, 1572 |
| BtsIMutI | CAGTG | 1 cut(s) | 879 |
| BveI | ACCTGC | 2 cut(s) | 681, 1346 |
| Cac8I | GCNNGC | 6 cut(s) | 464, 539, 877, 1132, 1572, 1605 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1307 |
| CciI | TCATGA | 1 cut(s) | 1558 |
| Cfr10I | RCCGGY | 2 cut(s) | 1058, 1570 |
| ClaI | ATCGAT | 1 cut(s) | 205 |
| CseI | GACGC | 1 cut(s) | 1602 |
| Csp6I | GTAC | 2 cut(s) | 175, 1208 |
| CviAII | CATG | 6 cut(s) | 325, 463, 571, 752, 1178, 1559 |
| CviQI | GTAC | 2 cut(s) | 175, 1208 |
| DdeI | CTNAG | 3 cut(s) | 660, 1185, 1395 |
| DpnI | GATC | 7 cut(s) | 204, 237, 340, 1158, 1218, 1269, 1557 |
| DpnII | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| DraI | TTTAAA | 1 cut(s) | 190 |
| Eam1104I | CTCTTC | 1 cut(s) | 793 |
| EarI | CTCTTC | 1 cut(s) | 793 |
| Eco32I | GATATC | 1 cut(s) | 1586 |
| Eco57I | CTGAAG | 1 cut(s) | 981 |
| Eco81I | CCTNAGG | 1 cut(s) | 1395 |
| Eco88I | CYCGRG | 1 cut(s) | 639 |
| EcoRII | CCWGG | 1 cut(s) | 1651 |
| EcoRV | GATATC | 1 cut(s) | 1586 |
| FaeI | CATG | 6 cut(s) | 328, 466, 574, 755, 1181, 1562 |
| FaqI | GGGAC | 1 cut(s) | 947 |
| FatI | CATG | 6 cut(s) | 324, 462, 570, 751, 1177, 1558 |
| FauI | CCCGC | 1 cut(s) | 1545 |
| FauNDI | CATATG | 1 cut(s) | 1348 |
| FbaI | TGATCA | 1 cut(s) | 235 |
| FblI | GTMKAC | 1 cut(s) | 1616 |
| Fnu4HI | GCNGC | 3 cut(s) | 132, 555, 1182 |
| FokI | GGATG | 2 cut(s) | 1166, 1579 |
| Fsp4HI | GCNGC | 3 cut(s) | 132, 555, 1182 |
| FspBI | CTAG | 5 cut(s) | 468, 975, 1361, 1446, 1526 |
| GluI | GCNGC | 3 cut(s) | 132, 555, 1182 |
| HapII | CCGG | 2 cut(s) | 1059, 1571 |
| HgaI | GACGC | 1 cut(s) | 1602 |
| Hin1II | CATG | 6 cut(s) | 328, 466, 574, 755, 1181, 1562 |
| HindIII | AAGCTT | 2 cut(s) | 1277, 1605 |
| HinfI | GANTC | 6 cut(s) | 107, 161, 256, 520, 679, 1304 |
| HpaII | CCGG | 2 cut(s) | 1059, 1571 |
| HphI | GGTGA | 4 cut(s) | 846, 906, 1079, 1091 |
| Hpy166II | GTNNAC | 2 cut(s) | 1070, 1617 |
| Hpy188I | TCNGA | 8 cut(s) | 106, 597, 663, 697, 928, 1047, 1105, 1140 |
| Hpy188III | TCNNGA | 4 cut(s) | 239, 1283, 1361, 1559 |
| Hpy8I | GTNNAC | 2 cut(s) | 1070, 1617 |
| HpyAV | CCTTC | 7 cut(s) | 81, 121, 591, 975, 1110, 1248, 1510 |
| HpyCH4III | ACNGT | 3 cut(s) | 713, 1029, 1079 |
| HpyCH4V | TGCA | 9 cut(s) | 23, 121, 134, 440, 656, 808, 830, 875, 1033 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1406, 1544 |
| HpyF3I | CTNAG | 3 cut(s) | 660, 1185, 1395 |
| Hsp92II | CATG | 6 cut(s) | 328, 466, 574, 755, 1181, 1562 |
| KroI | GCCGGC | 1 cut(s) | 1570 |
| KroNI | GCCGGC | 1 cut(s) | 1572 |
| Ksp22I | TGATCA | 1 cut(s) | 235 |
| Kzo9I | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| Lsp1109I | GCAGC | 3 cut(s) | 118, 541, 1168 |
| LweI | GCATC | 5 cut(s) | 16, 232, 449, 817, 1557 |
| MaeI | CTAG | 5 cut(s) | 468, 975, 1361, 1446, 1526 |
| MaeIII | GTNAC | 4 cut(s) | 284, 757, 1079, 1335 |
| MalI | GATC | 7 cut(s) | 204, 237, 340, 1158, 1218, 1269, 1557 |
| MboI | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| MboII | GAAGA | 5 cut(s) | 260, 729, 780, 960, 960 |
| MfeI | CAATTG | 1 cut(s) | 122 |
| MflI | RGATCY | 2 cut(s) | 338, 1216 |
| MmeI | TCCRAC | 1 cut(s) | 1517 |
| MroNI | GCCGGC | 1 cut(s) | 1570 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1539 |
| MseI | TTAA | 6 cut(s) | 32, 147, 189, 1014, 1200, 1454 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1511 |
| MspI | CCGG | 2 cut(s) | 1059, 1571 |
| MspR9I | CCNGG | 1 cut(s) | 1653 |
| MunI | CAATTG | 1 cut(s) | 122 |
| Mva1269I | GAATGC | 1 cut(s) | 877 |
| MvaI | CCWGG | 1 cut(s) | 1653 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1406, 1544 |
| NaeI | GCCGGC | 1 cut(s) | 1572 |
| NdeI | CATATG | 1 cut(s) | 1348 |
| NdeII | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| NgoMIV | GCCGGC | 1 cut(s) | 1570 |
| NlaIII | CATG | 6 cut(s) | 328, 466, 574, 755, 1181, 1562 |
| NmeAIII | GCCGAG | 1 cut(s) | 1579 |
| NmuCI | GTSAC | 4 cut(s) | 284, 757, 1079, 1335 |
| NspI | RCATGY | 2 cut(s) | 466, 574 |
| PaeI | GCATGC | 1 cut(s) | 466 |
| PaeR7I | CTCGAG | 1 cut(s) | 639 |
| PagI | TCATGA | 1 cut(s) | 1558 |
| PctI | GAATGC | 1 cut(s) | 877 |
| PdiI | GCCGGC | 1 cut(s) | 1572 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1539 |
| PfeI | GAWTC | 6 cut(s) | 107, 161, 256, 520, 679, 1304 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 944 |
| PkrI | GCNGC | 3 cut(s) | 133, 556, 1183 |
| PshBI | ATTAAT | 1 cut(s) | 1200 |
| Psp6I | CCWGG | 1 cut(s) | 1651 |
| PspGI | CCWGG | 1 cut(s) | 1651 |
| PspXI | VCTCGAGB | 1 cut(s) | 639 |
| PstI | CTGCAG | 1 cut(s) | 25 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1307 |
| PsuI | RGATCY | 2 cut(s) | 338, 1216 |
| RsaI | GTAC | 2 cut(s) | 176, 1209 |
| RsaNI | GTAC | 2 cut(s) | 175, 1208 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1511 |
| SaqAI | TTAA | 6 cut(s) | 32, 147, 189, 1014, 1200, 1454 |
| SatI | GCNGC | 3 cut(s) | 132, 555, 1182 |
| Sau3AI | GATC | 7 cut(s) | 202, 235, 338, 1156, 1216, 1267, 1555 |
| ScaI | AGTACT | 2 cut(s) | 176, 1209 |
| ScrFI | CCNGG | 1 cut(s) | 1653 |
| SfaNI | GCATC | 5 cut(s) | 16, 232, 449, 817, 1557 |
| SfcI | CTRYAG | 3 cut(s) | 21, 709, 1296 |
| Sfr274I | CTCGAG | 1 cut(s) | 639 |
| SlaI | CTCGAG | 1 cut(s) | 639 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1511 |
| SmlI | CTYRAG | 3 cut(s) | 80, 639, 1160 |
| SmoI | CTYRAG | 3 cut(s) | 80, 639, 1160 |
| SphI | GCATGC | 1 cut(s) | 466 |
| SsiI | CCGC | 1 cut(s) | 1552 |
| SspI | AATATT | 2 cut(s) | 475, 990 |
| SspMI | CTAG | 5 cut(s) | 468, 975, 1361, 1446, 1526 |
| StyD4I | CCNGG | 1 cut(s) | 1651 |
| TaaI | ACNGT | 3 cut(s) | 713, 1029, 1079 |
| TaqI | TCGA | 3 cut(s) | 205, 640, 1282 |
| TatI | WGTACW | 2 cut(s) | 174, 1207 |
| TfiI | GAWTC | 6 cut(s) | 107, 161, 256, 520, 679, 1304 |
| Tru1I | TTAA | 6 cut(s) | 32, 147, 189, 1014, 1200, 1454 |
| Tru9I | TTAA | 6 cut(s) | 32, 147, 189, 1014, 1200, 1454 |
| TscAI | CASTG | 1 cut(s) | 886 |
| TseFI | GTSAC | 4 cut(s) | 284, 757, 1079, 1335 |
| TseI | GCWGC | 3 cut(s) | 131, 554, 1181 |
| Tsp45I | GTSAC | 4 cut(s) | 284, 757, 1079, 1335 |
| TspRI | CASTG | 1 cut(s) | 886 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 944 |
| VspI | ATTAAT | 1 cut(s) | 1200 |
| XapI | RAATTY | 4 cut(s) | 248, 483, 1313, 1621 |
| XbaI | TCTAGA | 1 cut(s) | 1360 |
| XceI | RCATGY | 2 cut(s) | 466, 574 |
| XhoI | CTCGAG | 1 cut(s) | 639 |
| XmiI | GTMKAC | 1 cut(s) | 1616 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1539 |
| XspI | CTAG | 5 cut(s) | 468, 975, 1361, 1446, 1526 |
| ZrmI | AGTACT | 2 cut(s) | 176, 1209 |