gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 431 |
| AccB1I | GGYRCC | 1 cut(s) | 431 |
| AcsI | RAATTY | 2 cut(s) | 291, 566 |
| AcuI | CTGAAG | 1 cut(s) | 534 |
| AdeI | CACNNNGTG | 1 cut(s) | 581 |
| AfaI | GTAC | 3 cut(s) | 266, 433, 645 |
| AgsI | TTSAA | 2 cut(s) | 480, 527 |
| AluBI | AGCT | 2 cut(s) | 155, 271 |
| AluI | AGCT | 2 cut(s) | 155, 271 |
| Alw21I | GWGCWC | 1 cut(s) | 273 |
| Alw26I | GTCTC | 1 cut(s) | 630 |
| ApoI | RAATTY | 2 cut(s) | 291, 566 |
| Asp718I | GGTACC | 1 cut(s) | 431 |
| AspS9I | GGNCC | 2 cut(s) | 349, 555 |
| AsuHPI | GGTGA | 1 cut(s) | 593 |
| AsuII | TTCGAA | 1 cut(s) | 251 |
| AvaII | GGWCC | 2 cut(s) | 349, 555 |
| BanI | GGYRCC | 1 cut(s) | 431 |
| BanII | GRGCYC | 1 cut(s) | 273 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 586, 618 |
| BbsI | GAAGAC | 1 cut(s) | 393 |
| Bbv12I | GWGCWC | 1 cut(s) | 273 |
| BccI | CCATC | 1 cut(s) | 29 |
| BcoDI | GTCTC | 1 cut(s) | 630 |
| BfaI | CTAG | 1 cut(s) | 152 |
| BglII | AGATCT | 2 cut(s) | 276, 494 |
| Bme18I | GGWCC | 2 cut(s) | 349, 555 |
| BmgT120I | GGNCC | 2 cut(s) | 349, 555 |
| BmiI | GGNNCC | 2 cut(s) | 350, 433 |
| BmsI | GCATC | 1 cut(s) | 163 |
| BpiI | GAAGAC | 1 cut(s) | 393 |
| Bpu14I | TTCGAA | 1 cut(s) | 251 |
| BpuEI | CTTGAG | 2 cut(s) | 248, 257 |
| BsaJI | CCNNGG | 1 cut(s) | 631 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 627 |
| BseDI | CCNNGG | 1 cut(s) | 631 |
| BseGI | GGATG | 1 cut(s) | 17 |
| BseMII | CTCAG | 1 cut(s) | 435 |
| BseRI | GAGGAG | 1 cut(s) | 245 |
| BshNI | GGYRCC | 1 cut(s) | 431 |
| BsiHKAI | GWGCWC | 1 cut(s) | 273 |
| BsiWI | CGTACG | 1 cut(s) | 264 |
| BslFI | GGGAC | 3 cut(s) | 29, 362, 613 |
| BsmAI | GTCTC | 1 cut(s) | 630 |
| BsmFI | GGGAC | 3 cut(s) | 29, 362, 613 |
| Bsp119I | TTCGAA | 1 cut(s) | 251 |
| Bsp1286I | GDGCHC | 1 cut(s) | 273 |
| Bsp1407I | TGTACA | 1 cut(s) | 643 |
| Bsp143I | GATC | 4 cut(s) | 16, 276, 494, 507 |
| BspCNI | CTCAG | 1 cut(s) | 434 |
| BspLI | GGNNCC | 2 cut(s) | 350, 433 |
| BspT104I | TTCGAA | 1 cut(s) | 251 |
| BspT107I | GGYRCC | 1 cut(s) | 431 |
| BsrGI | TGTACA | 1 cut(s) | 643 |
| BssECI | CCNNGG | 1 cut(s) | 631 |
| BssMI | GATC | 4 cut(s) | 16, 276, 494, 507 |
| BssT1I | CCWWGG | 1 cut(s) | 631 |
| Bst4CI | ACNGT | 3 cut(s) | 343, 535, 613 |
| BstAUI | TGTACA | 1 cut(s) | 643 |
| BstBI | TTCGAA | 1 cut(s) | 251 |
| BstDEI | CTNAG | 3 cut(s) | 400, 421, 590 |
| BstF5I | GGATG | 1 cut(s) | 17 |
| BstKTI | GATC | 4 cut(s) | 19, 279, 497, 510 |
| BstMAI | GTCTC | 1 cut(s) | 630 |
| BstMBI | GATC | 4 cut(s) | 16, 276, 494, 507 |
| BstV2I | GAAGAC | 1 cut(s) | 393 |
| BstX2I | RGATCY | 2 cut(s) | 276, 494 |
| BstYI | RGATCY | 2 cut(s) | 276, 494 |
| BtsCI | GGATG | 1 cut(s) | 17 |
| Cfr13I | GGNCC | 2 cut(s) | 349, 555 |
| Csp6I | GTAC | 3 cut(s) | 265, 432, 644 |
| CviAII | CATG | 3 cut(s) | 410, 436, 578 |
| CviJI | RGCY | 3 cut(s) | 80, 155, 271 |
| CviKI_1 | RGCY | 3 cut(s) | 80, 155, 271 |
| CviQI | GTAC | 3 cut(s) | 265, 432, 644 |
| DdeI | CTNAG | 3 cut(s) | 400, 421, 590 |
| DpnI | GATC | 4 cut(s) | 18, 278, 496, 509 |
| DpnII | GATC | 4 cut(s) | 16, 276, 494, 507 |
| DraIII | CACNNNGTG | 1 cut(s) | 581 |
| Ecl136II | GAGCTC | 1 cut(s) | 271 |
| Eco130I | CCWWGG | 1 cut(s) | 631 |
| Eco24I | GRGCYC | 1 cut(s) | 273 |
| Eco47I | GGWCC | 2 cut(s) | 349, 555 |
| Eco53kI | GAGCTC | 1 cut(s) | 271 |
| Eco57I | CTGAAG | 1 cut(s) | 534 |
| EcoICRI | GAGCTC | 1 cut(s) | 271 |
| EcoT14I | CCWWGG | 1 cut(s) | 631 |
| EcoT38I | GRGCYC | 1 cut(s) | 273 |
| ErhI | CCWWGG | 1 cut(s) | 631 |
| FaeI | CATG | 3 cut(s) | 413, 439, 581 |
| FaqI | GGGAC | 3 cut(s) | 29, 362, 613 |
| FatI | CATG | 3 cut(s) | 409, 435, 577 |
| FokI | GGATG | 1 cut(s) | 24 |
| FriOI | GRGCYC | 1 cut(s) | 273 |
| FspBI | CTAG | 1 cut(s) | 152 |
| Hin1II | CATG | 3 cut(s) | 413, 439, 581 |
| HinfI | GANTC | 3 cut(s) | 66, 131, 626 |
| HphI | GGTGA | 1 cut(s) | 593 |
| Hpy166II | GTNNAC | 1 cut(s) | 245 |
| Hpy188I | TCNGA | 4 cut(s) | 172, 297, 382, 424 |
| Hpy188III | TCNNGA | 2 cut(s) | 113, 274 |
| Hpy8I | GTNNAC | 1 cut(s) | 245 |
| HpyAV | CCTTC | 2 cut(s) | 63, 588 |
| HpyCH4III | ACNGT | 3 cut(s) | 343, 535, 613 |
| HpyCH4V | TGCA | 1 cut(s) | 286 |
| HpyF3I | CTNAG | 3 cut(s) | 400, 421, 590 |
| Hsp92II | CATG | 3 cut(s) | 413, 439, 581 |
| KpnI | GGTACC | 1 cut(s) | 435 |
| Kzo9I | GATC | 4 cut(s) | 16, 276, 494, 507 |
| LpnPI | CCDG | 4 cut(s) | 61, 66, 98, 351 |
| LweI | GCATC | 1 cut(s) | 163 |
| MaeI | CTAG | 1 cut(s) | 152 |
| MaeIII | GTNAC | 1 cut(s) | 97 |
| MalI | GATC | 4 cut(s) | 18, 278, 496, 509 |
| MboI | GATC | 4 cut(s) | 16, 276, 494, 507 |
| MboII | GAAGA | 6 cut(s) | 136, 398, 398, 497, 527, 539 |
| MflI | RGATCY | 2 cut(s) | 276, 494 |
| MhlI | GDGCHC | 1 cut(s) | 273 |
| MluCI | AATT | 4 cut(s) | 291, 453, 488, 566 |
| MlyI | GAGTC | 3 cut(s) | 60, 125, 635 |
| MnlI | CCTC | 4 cut(s) | 114, 223, 430, 546 |
| MseI | TTAA | 4 cut(s) | 336, 456, 491, 618 |
| NdeII | GATC | 4 cut(s) | 16, 276, 494, 507 |
| NlaIII | CATG | 3 cut(s) | 413, 439, 581 |
| NlaIV | GGNNCC | 2 cut(s) | 350, 433 |
| NmuCI | GTSAC | 1 cut(s) | 97 |
| NspV | TTCGAA | 1 cut(s) | 251 |
| Pfl23II | CGTACG | 1 cut(s) | 264 |
| PleI | GAGTC | 3 cut(s) | 60, 125, 634 |
| PpsI | GAGTC | 3 cut(s) | 60, 125, 634 |
| Psp124BI | GAGCTC | 1 cut(s) | 273 |
| PspLI | CGTACG | 1 cut(s) | 264 |
| PspN4I | GGNNCC | 2 cut(s) | 350, 433 |
| PspPI | GGNCC | 2 cut(s) | 349, 555 |
| PsuI | RGATCY | 2 cut(s) | 276, 494 |
| RsaI | GTAC | 3 cut(s) | 266, 433, 645 |
| RsaNI | GTAC | 3 cut(s) | 265, 432, 644 |
| SacI | GAGCTC | 1 cut(s) | 273 |
| SaqAI | TTAA | 4 cut(s) | 336, 456, 491, 618 |
| Sau3AI | GATC | 4 cut(s) | 16, 276, 494, 507 |
| Sau96I | GGNCC | 2 cut(s) | 349, 555 |
| SchI | GAGTC | 3 cut(s) | 60, 125, 635 |
| SduI | GDGCHC | 1 cut(s) | 273 |
| SetI | ASST | 5 cut(s) | 157, 273, 304, 557, 599 |
| SfaNI | GCATC | 1 cut(s) | 163 |
| SfuI | TTCGAA | 1 cut(s) | 251 |
| SinI | GGWCC | 2 cut(s) | 349, 555 |
| SmlI | CTYRAG | 2 cut(s) | 227, 272 |
| SmoI | CTYRAG | 2 cut(s) | 227, 272 |
| Sse9I | AATT | 4 cut(s) | 291, 453, 488, 566 |
| SspMI | CTAG | 1 cut(s) | 152 |
| SstI | GAGCTC | 1 cut(s) | 273 |
| StyI | CCWWGG | 1 cut(s) | 631 |
| TaaI | ACNGT | 3 cut(s) | 343, 535, 613 |
| TaqI | TCGA | 1 cut(s) | 251 |
| TaqII | GACCGA | 1 cut(s) | 366 |
| TasI | AATT | 4 cut(s) | 291, 453, 488, 566 |
| TatI | WGTACW | 1 cut(s) | 643 |
| Tru1I | TTAA | 4 cut(s) | 336, 456, 491, 618 |
| Tru9I | TTAA | 4 cut(s) | 336, 456, 491, 618 |
| TseFI | GTSAC | 1 cut(s) | 97 |
| Tsp45I | GTSAC | 1 cut(s) | 97 |
| TspDTI | ATGAA | 4 cut(s) | 175, 398, 399, 452 |
| TspGWI | ACGGA | 1 cut(s) | 78 |
| VpaK11BI | GGWCC | 2 cut(s) | 349, 555 |
| XapI | RAATTY | 2 cut(s) | 291, 566 |
| XspI | CTAG | 1 cut(s) | 152 |