gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 52 |
| AccII | CGCG | 1 cut(s) | 411 |
| AcsI | RAATTY | 2 cut(s) | 278, 383 |
| AflII | CTTAAG | 1 cut(s) | 23 |
| AgsI | TTSAA | 3 cut(s) | 286, 388, 437 |
| AluBI | AGCT | 4 cut(s) | 173, 209, 213, 454 |
| AluI | AGCT | 4 cut(s) | 173, 209, 213, 454 |
| ApoI | RAATTY | 2 cut(s) | 278, 383 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 265, 297 |
| AspLEI | GCGC | 1 cut(s) | 413 |
| AsuNHI | GCTAGC | 1 cut(s) | 209 |
| BaeGI | GKGCMC | 1 cut(s) | 32 |
| BauI | CACGAG | 1 cut(s) | 350 |
| BccI | CCATC | 3 cut(s) | 40, 341, 388 |
| BclI | TGATCA | 1 cut(s) | 186 |
| BfaI | CTAG | 1 cut(s) | 210 |
| BfrI | CTTAAG | 1 cut(s) | 23 |
| BmsI | GCATC | 1 cut(s) | 316 |
| BmtI | GCTAGC | 1 cut(s) | 213 |
| BpuEI | CTTGAG | 1 cut(s) | 215 |
| Bsa29I | ATCGAT | 1 cut(s) | 299 |
| Bse1I | ACTGG | 1 cut(s) | 318 |
| BseCI | ATCGAT | 1 cut(s) | 299 |
| BseNI | ACTGG | 1 cut(s) | 318 |
| BseSI | GKGCMC | 1 cut(s) | 32 |
| Bsh1236I | CGCG | 1 cut(s) | 411 |
| BshVI | ATCGAT | 1 cut(s) | 299 |
| BslFI | GGGAC | 2 cut(s) | 52, 191 |
| BsmFI | GGGAC | 2 cut(s) | 52, 191 |
| Bsp1286I | GDGCHC | 1 cut(s) | 32 |
| Bsp143I | GATC | 2 cut(s) | 186, 346 |
| BspDI | ATCGAT | 1 cut(s) | 299 |
| BspFNI | CGCG | 1 cut(s) | 411 |
| BspHI | TCATGA | 4 cut(s) | 222, 256, 379, 415 |
| BspOI | GCTAGC | 1 cut(s) | 213 |
| BspTI | CTTAAG | 1 cut(s) | 23 |
| BsrI | ACTGG | 1 cut(s) | 318 |
| BssMI | GATC | 2 cut(s) | 186, 346 |
| BssSI | CACGAG | 1 cut(s) | 350 |
| Bst2BI | CACGAG | 1 cut(s) | 350 |
| Bst4CI | ACNGT | 1 cut(s) | 151 |
| BstAFI | CTTAAG | 1 cut(s) | 23 |
| BstC8I | GCNNGC | 2 cut(s) | 67, 211 |
| BstFNI | CGCG | 1 cut(s) | 411 |
| BstHHI | GCGC | 1 cut(s) | 413 |
| BstKTI | GATC | 2 cut(s) | 189, 349 |
| BstMBI | GATC | 2 cut(s) | 186, 346 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 113, 206, 410, 451 |
| BstNSI | RCATGY | 2 cut(s) | 69, 107 |
| BstSLI | GKGCMC | 1 cut(s) | 32 |
| BstUI | CGCG | 1 cut(s) | 411 |
| Bsu15I | ATCGAT | 1 cut(s) | 299 |
| BsuTUI | ATCGAT | 1 cut(s) | 299 |
| Cac8I | GCNNGC | 2 cut(s) | 67, 211 |
| CciI | TCATGA | 4 cut(s) | 222, 256, 379, 415 |
| CfoI | GCGC | 1 cut(s) | 413 |
| ClaI | ATCGAT | 1 cut(s) | 299 |
| CseI | GACGC | 1 cut(s) | 111 |
| CviAII | CATG | 8 cut(s) | 66, 104, 223, 244, 257, 380, 416, 446 |
| CviJI | RGCY | 8 cut(s) | 6, 173, 209, 213, 228, 241, 317, 454 |
| CviKI_1 | RGCY | 8 cut(s) | 6, 173, 209, 213, 228, 241, 317, 454 |
| DpnI | GATC | 2 cut(s) | 188, 348 |
| DpnII | GATC | 2 cut(s) | 186, 346 |
| EcoRI | GAATTC | 1 cut(s) | 383 |
| FaeI | CATG | 8 cut(s) | 69, 107, 226, 247, 260, 383, 419, 449 |
| FaqI | GGGAC | 2 cut(s) | 52, 191 |
| FatI | CATG | 8 cut(s) | 65, 103, 222, 243, 256, 379, 415, 445 |
| FauNDI | CATATG | 1 cut(s) | 118 |
| FbaI | TGATCA | 1 cut(s) | 186 |
| FblI | GTMKAC | 1 cut(s) | 52 |
| FspBI | CTAG | 1 cut(s) | 210 |
| GlaI | GCGC | 1 cut(s) | 412 |
| HgaI | GACGC | 1 cut(s) | 111 |
| HhaI | GCGC | 1 cut(s) | 413 |
| Hin1II | CATG | 8 cut(s) | 69, 107, 226, 247, 260, 383, 419, 449 |
| Hin6I | GCGC | 1 cut(s) | 411 |
| HinP1I | GCGC | 1 cut(s) | 411 |
| HincII | GTYRAC | 1 cut(s) | 53 |
| HindII | GTYRAC | 1 cut(s) | 53 |
| HindIII | AAGCTT | 2 cut(s) | 171, 452 |
| HinfI | GANTC | 2 cut(s) | 88, 355 |
| Hpy166II | GTNNAC | 1 cut(s) | 53 |
| Hpy188I | TCNGA | 1 cut(s) | 87 |
| Hpy188III | TCNNGA | 6 cut(s) | 76, 223, 257, 352, 380, 416 |
| Hpy8I | GTNNAC | 1 cut(s) | 53 |
| HpyCH4III | ACNGT | 1 cut(s) | 151 |
| HpyCH4IV | ACGT | 1 cut(s) | 82 |
| HpyCH4V | TGCA | 6 cut(s) | 65, 116, 155, 200, 329, 445 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 113, 206, 410, 451 |
| HpySE526I | ACGT | 1 cut(s) | 82 |
| Hsp92II | CATG | 8 cut(s) | 69, 107, 226, 247, 260, 383, 419, 449 |
| HspAI | GCGC | 1 cut(s) | 411 |
| Ksp22I | TGATCA | 1 cut(s) | 186 |
| Kzo9I | GATC | 2 cut(s) | 186, 346 |
| LmnI | GCTCC | 1 cut(s) | 23 |
| LpnPI | CCDG | 4 cut(s) | 21, 61, 111, 299 |
| LweI | GCATC | 1 cut(s) | 316 |
| MaeI | CTAG | 1 cut(s) | 210 |
| MaeII | ACGT | 1 cut(s) | 82 |
| MalI | GATC | 2 cut(s) | 188, 348 |
| MboI | GATC | 2 cut(s) | 186, 346 |
| MboII | GAAGA | 1 cut(s) | 449 |
| MhlI | GDGCHC | 1 cut(s) | 32 |
| MluCI | AATT | 5 cut(s) | 132, 190, 278, 383, 440 |
| MnlI | CCTC | 1 cut(s) | 239 |
| MseI | TTAA | 4 cut(s) | 24, 294, 459, 475 |
| MspCI | CTTAAG | 1 cut(s) | 23 |
| MvnI | CGCG | 1 cut(s) | 411 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 113, 206, 410, 451 |
| NdeI | CATATG | 1 cut(s) | 118 |
| NdeII | GATC | 2 cut(s) | 186, 346 |
| NheI | GCTAGC | 1 cut(s) | 209 |
| NlaIII | CATG | 8 cut(s) | 69, 107, 226, 247, 260, 383, 419, 449 |
| NspI | RCATGY | 2 cut(s) | 69, 107 |
| PaeI | GCATGC | 1 cut(s) | 69 |
| PagI | TCATGA | 4 cut(s) | 222, 256, 379, 415 |
| PfeI | GAWTC | 2 cut(s) | 88, 355 |
| SalI | GTCGAC | 1 cut(s) | 51 |
| SaqAI | TTAA | 4 cut(s) | 24, 294, 459, 475 |
| Sau3AI | GATC | 2 cut(s) | 186, 346 |
| SduI | GDGCHC | 1 cut(s) | 32 |
| SetI | ASST | 6 cut(s) | 85, 175, 211, 215, 379, 456 |
| SfaNI | GCATC | 1 cut(s) | 316 |
| SmlI | CTYRAG | 2 cut(s) | 23, 230 |
| SmoI | CTYRAG | 2 cut(s) | 23, 230 |
| SphI | GCATGC | 1 cut(s) | 69 |
| Sse9I | AATT | 5 cut(s) | 132, 190, 278, 383, 440 |
| SspMI | CTAG | 1 cut(s) | 210 |
| TaaI | ACNGT | 1 cut(s) | 151 |
| TaiI | ACGT | 1 cut(s) | 85 |
| TaqI | TCGA | 3 cut(s) | 52, 205, 299 |
| TasI | AATT | 5 cut(s) | 132, 190, 278, 383, 440 |
| TfiI | GAWTC | 2 cut(s) | 88, 355 |
| Tru1I | TTAA | 4 cut(s) | 24, 294, 459, 475 |
| Tru9I | TTAA | 4 cut(s) | 24, 294, 459, 475 |
| TspDTI | ATGAA | 6 cut(s) | 273, 324, 347, 396, 415, 432 |
| Vha464I | CTTAAG | 1 cut(s) | 23 |
| XapI | RAATTY | 2 cut(s) | 278, 383 |
| XceI | RCATGY | 2 cut(s) | 69, 107 |
| XmiI | GTMKAC | 1 cut(s) | 52 |
| XspI | CTAG | 1 cut(s) | 210 |