gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 2 cut(s) | 89, 142 |
| AcuI | CTGAAG | 1 cut(s) | 104 |
| AgsI | TTSAA | 1 cut(s) | 82 |
| AjnI | CCWGG | 1 cut(s) | 177 |
| AluBI | AGCT | 2 cut(s) | 85, 124 |
| AluI | AGCT | 2 cut(s) | 85, 124 |
| Alw26I | GTCTC | 1 cut(s) | 164 |
| ApeKI | GCWGC | 1 cut(s) | 95 |
| ApoI | RAATTY | 2 cut(s) | 89, 142 |
| ArsI | GACNNNNNNTTYG | 1 cut(s) | 36 |
| AspLEI | GCGC | 1 cut(s) | 156 |
| BanII | GRGCYC | 1 cut(s) | 270 |
| BbsI | GAAGAC | 1 cut(s) | 246 |
| BbvI | GCAGC | 1 cut(s) | 107 |
| BciT130I | CCWGG | 1 cut(s) | 179 |
| BcoDI | GTCTC | 1 cut(s) | 164 |
| BfmI | CTRYAG | 1 cut(s) | 24 |
| BisI | GCNGC | 1 cut(s) | 96 |
| BlsI | GCNGC | 1 cut(s) | 97 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BmsI | GCATC | 1 cut(s) | 193 |
| BpiI | GAAGAC | 1 cut(s) | 246 |
| BsaJI | CCNNGG | 1 cut(s) | 207 |
| BseBI | CCWGG | 1 cut(s) | 179 |
| BseDI | CCNNGG | 1 cut(s) | 207 |
| BseXI | GCAGC | 1 cut(s) | 107 |
| BsgI | GTGCAG | 1 cut(s) | 60 |
| BslFI | GGGAC | 1 cut(s) | 86 |
| BsmAI | GTCTC | 1 cut(s) | 164 |
| BsmFI | GGGAC | 1 cut(s) | 86 |
| Bsp1286I | GDGCHC | 1 cut(s) | 270 |
| BssECI | CCNNGG | 1 cut(s) | 207 |
| BssT1I | CCWWGG | 1 cut(s) | 207 |
| Bst2UI | CCWGG | 1 cut(s) | 179 |
| Bst4CI | ACNGT | 2 cut(s) | 217, 256 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 203 |
| BstDEI | CTNAG | 2 cut(s) | 260, 269 |
| BstHHI | GCGC | 1 cut(s) | 156 |
| BstMAI | GTCTC | 1 cut(s) | 164 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 203, 265 |
| BstNI | CCWGG | 1 cut(s) | 179 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| BstSFI | CTRYAG | 1 cut(s) | 24 |
| BstV1I | GCAGC | 1 cut(s) | 107 |
| BstV2I | GAAGAC | 1 cut(s) | 246 |
| BtsI | GCAGTG | 1 cut(s) | 163 |
| BtsIMutI | CAGTG | 1 cut(s) | 163 |
| CfoI | GCGC | 1 cut(s) | 156 |
| CviAII | CATG | 1 cut(s) | 31 |
| CviJI | RGCY | 4 cut(s) | 29, 85, 124, 268 |
| CviKI_1 | RGCY | 4 cut(s) | 29, 85, 124, 268 |
| DdeI | CTNAG | 2 cut(s) | 260, 269 |
| Eco130I | CCWWGG | 1 cut(s) | 207 |
| Eco24I | GRGCYC | 1 cut(s) | 270 |
| Eco57I | CTGAAG | 1 cut(s) | 104 |
| EcoRII | CCWGG | 1 cut(s) | 177 |
| EcoT14I | CCWWGG | 1 cut(s) | 207 |
| EcoT38I | GRGCYC | 1 cut(s) | 270 |
| ErhI | CCWWGG | 1 cut(s) | 207 |
| FaeI | CATG | 1 cut(s) | 34 |
| FaiI | YATR | 1 cut(s) | 32 |
| FaqI | GGGAC | 1 cut(s) | 86 |
| FatI | CATG | 1 cut(s) | 30 |
| Fnu4HI | GCNGC | 1 cut(s) | 96 |
| FriOI | GRGCYC | 1 cut(s) | 270 |
| Fsp4HI | GCNGC | 1 cut(s) | 96 |
| GlaI | GCGC | 1 cut(s) | 155 |
| GluI | GCNGC | 1 cut(s) | 96 |
| HhaI | GCGC | 1 cut(s) | 156 |
| Hin1II | CATG | 1 cut(s) | 34 |
| Hin6I | GCGC | 1 cut(s) | 154 |
| HinP1I | GCGC | 1 cut(s) | 154 |
| HinfI | GANTC | 1 cut(s) | 222 |
| HpyCH4III | ACNGT | 2 cut(s) | 217, 256 |
| HpyCH4V | TGCA | 4 cut(s) | 41, 95, 139, 197 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 203, 265 |
| HpyF3I | CTNAG | 2 cut(s) | 260, 269 |
| Hsp92II | CATG | 1 cut(s) | 34 |
| HspAI | GCGC | 1 cut(s) | 154 |
| LpnPI | CCDG | 4 cut(s) | 36, 49, 164, 191 |
| Lsp1109I | GCAGC | 1 cut(s) | 107 |
| LweI | GCATC | 1 cut(s) | 193 |
| MaeIII | GTNAC | 2 cut(s) | 223, 250 |
| MboII | GAAGA | 2 cut(s) | 110, 251 |
| MfeI | CAATTG | 1 cut(s) | 228 |
| MhlI | GDGCHC | 1 cut(s) | 270 |
| MluCI | AATT | 5 cut(s) | 89, 133, 142, 192, 228 |
| MlyI | GAGTC | 1 cut(s) | 231 |
| MmeI | TCCRAC | 1 cut(s) | 199 |
| MnlI | CCTC | 1 cut(s) | 257 |
| MseI | TTAA | 1 cut(s) | 17 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| MunI | CAATTG | 1 cut(s) | 228 |
| MvaI | CCWGG | 1 cut(s) | 179 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 203, 265 |
| NlaIII | CATG | 1 cut(s) | 34 |
| NmuCI | GTSAC | 1 cut(s) | 223 |
| PkrI | GCNGC | 1 cut(s) | 97 |
| PleI | GAGTC | 1 cut(s) | 230 |
| PpsI | GAGTC | 1 cut(s) | 230 |
| Psp6I | CCWGG | 1 cut(s) | 177 |
| PspGI | CCWGG | 1 cut(s) | 177 |
| SaqAI | TTAA | 1 cut(s) | 17 |
| SatI | GCNGC | 1 cut(s) | 96 |
| SchI | GAGTC | 1 cut(s) | 231 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SduI | GDGCHC | 1 cut(s) | 270 |
| SetI | ASST | 4 cut(s) | 38, 87, 126, 180 |
| SfaNI | GCATC | 1 cut(s) | 193 |
| SfcI | CTRYAG | 1 cut(s) | 24 |
| SgeI | CNNG | 9 cut(s) | 35, 43, 48, 64, 91, 190, 191, 210, 220 |
| Sse9I | AATT | 5 cut(s) | 89, 133, 142, 192, 228 |
| SspI | AATATT | 1 cut(s) | 115 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| StyI | CCWWGG | 1 cut(s) | 207 |
| TaaI | ACNGT | 2 cut(s) | 217, 256 |
| TasI | AATT | 5 cut(s) | 89, 133, 142, 192, 228 |
| Tru1I | TTAA | 1 cut(s) | 17 |
| Tru9I | TTAA | 1 cut(s) | 17 |
| TscAI | CASTG | 1 cut(s) | 163 |
| TseFI | GTSAC | 1 cut(s) | 223 |
| TseI | GCWGC | 1 cut(s) | 95 |
| Tsp45I | GTSAC | 1 cut(s) | 223 |
| TspDTI | ATGAA | 1 cut(s) | 252 |
| TspRI | CASTG | 1 cut(s) | 163 |
| XapI | RAATTY | 2 cut(s) | 89, 142 |