transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 104, 398 |
| AcsI | RAATTY | 2 cut(s) | 169, 247 |
| AcuI | CTGAAG | 1 cut(s) | 384 |
| AfaI | GTAC | 3 cut(s) | 12, 27, 417 |
| AfeI | AGCGCT | 1 cut(s) | 47 |
| AgsI | TTSAA | 3 cut(s) | 19, 169, 175 |
| AjnI | CCWGG | 3 cut(s) | 356, 386, 455 |
| AluBI | AGCT | 2 cut(s) | 243, 444 |
| AluI | AGCT | 2 cut(s) | 243, 444 |
| AlwI | GGATC | 2 cut(s) | 104, 398 |
| Aor51HI | AGCGCT | 1 cut(s) | 47 |
| ApeKI | GCWGC | 1 cut(s) | 422 |
| ApoI | RAATTY | 2 cut(s) | 169, 247 |
| AspLEI | GCGC | 1 cut(s) | 48 |
| AsuHPI | GGTGA | 1 cut(s) | 398 |
| BbvI | GCAGC | 1 cut(s) | 409 |
| BccI | CCATC | 1 cut(s) | 311 |
| BciT130I | CCWGG | 3 cut(s) | 358, 388, 457 |
| BciVI | GTATCC | 1 cut(s) | 354 |
| BfaI | CTAG | 1 cut(s) | 240 |
| BfoI | RGCGCY | 1 cut(s) | 49 |
| BfuI | GTATCC | 1 cut(s) | 354 |
| BisI | GCNGC | 1 cut(s) | 423 |
| BlsI | GCNGC | 1 cut(s) | 424 |
| Bme1390I | CCNGG | 3 cut(s) | 358, 388, 457 |
| BmiI | GGNNCC | 1 cut(s) | 280 |
| BmrFI | CCNGG | 3 cut(s) | 358, 388, 457 |
| BmsI | GCATC | 1 cut(s) | 361 |
| BsaAI | YACGTR | 1 cut(s) | 470 |
| Bse1I | ACTGG | 1 cut(s) | 282 |
| BseBI | CCWGG | 3 cut(s) | 358, 388, 457 |
| BseGI | GGATG | 1 cut(s) | 322 |
| BseNI | ACTGG | 1 cut(s) | 282 |
| BseXI | GCAGC | 1 cut(s) | 409 |
| Bsp1407I | TGTACA | 1 cut(s) | 10 |
| Bsp143I | GATC | 2 cut(s) | 96, 390 |
| BspLI | GGNNCC | 1 cut(s) | 280 |
| BspPI | GGATC | 2 cut(s) | 104, 398 |
| BsrGI | TGTACA | 1 cut(s) | 10 |
| BsrI | ACTGG | 1 cut(s) | 282 |
| BssMI | GATC | 2 cut(s) | 96, 390 |
| Bst2UI | CCWGG | 3 cut(s) | 358, 388, 457 |
| Bst4CI | ACNGT | 4 cut(s) | 38, 337, 379, 415 |
| Bst6I | CTCTTC | 1 cut(s) | 403 |
| BstAUI | TGTACA | 1 cut(s) | 10 |
| BstBAI | YACGTR | 1 cut(s) | 470 |
| BstDEI | CTNAG | 1 cut(s) | 160 |
| BstF5I | GGATG | 1 cut(s) | 322 |
| BstH2I | RGCGCY | 1 cut(s) | 49 |
| BstHHI | GCGC | 1 cut(s) | 48 |
| BstKTI | GATC | 2 cut(s) | 99, 393 |
| BstMBI | GATC | 2 cut(s) | 96, 390 |
| BstNI | CCWGG | 3 cut(s) | 358, 388, 457 |
| BstSCI | CCNGG | 3 cut(s) | 356, 386, 455 |
| BstV1I | GCAGC | 1 cut(s) | 409 |
| BstX2I | RGATCY | 1 cut(s) | 96 |
| BstYI | RGATCY | 1 cut(s) | 96 |
| BsuI | GTATCC | 1 cut(s) | 354 |
| BtsCI | GGATG | 1 cut(s) | 322 |
| BtsIMutI | CAGTG | 3 cut(s) | 327, 375, 411 |
| CfoI | GCGC | 1 cut(s) | 48 |
| Csp6I | GTAC | 3 cut(s) | 11, 26, 416 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 400, 435 |
| CviAII | CATG | 5 cut(s) | 5, 29, 256, 368, 382 |
| CviJI | RGCY | 2 cut(s) | 243, 444 |
| CviKI_1 | RGCY | 2 cut(s) | 243, 444 |
| CviQI | GTAC | 3 cut(s) | 11, 26, 416 |
| DdeI | CTNAG | 1 cut(s) | 160 |
| DpnI | GATC | 2 cut(s) | 98, 392 |
| DpnII | GATC | 2 cut(s) | 96, 390 |
| Eam1104I | CTCTTC | 1 cut(s) | 403 |
| EarI | CTCTTC | 1 cut(s) | 403 |
| Eco47III | AGCGCT | 1 cut(s) | 47 |
| Eco57I | CTGAAG | 1 cut(s) | 384 |
| EcoRII | CCWGG | 3 cut(s) | 356, 386, 455 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaeI | CATG | 5 cut(s) | 8, 32, 259, 371, 385 |
| FaiI | YATR | 8 cut(s) | 6, 30, 65, 193, 199, 257, 369, 383 |
| FatI | CATG | 5 cut(s) | 4, 28, 255, 367, 381 |
| Fnu4HI | GCNGC | 1 cut(s) | 423 |
| FokI | GGATG | 1 cut(s) | 329 |
| Fsp4HI | GCNGC | 1 cut(s) | 423 |
| FspBI | CTAG | 1 cut(s) | 240 |
| GlaI | GCGC | 1 cut(s) | 47 |
| GluI | GCNGC | 1 cut(s) | 423 |
| HaeII | RGCGCY | 1 cut(s) | 49 |
| HhaI | GCGC | 1 cut(s) | 48 |
| Hin1II | CATG | 5 cut(s) | 8, 32, 259, 371, 385 |
| Hin6I | GCGC | 1 cut(s) | 46 |
| HinP1I | GCGC | 1 cut(s) | 46 |
| HincII | GTYRAC | 2 cut(s) | 274, 340 |
| HindII | GTYRAC | 2 cut(s) | 274, 340 |
| HinfI | GANTC | 1 cut(s) | 123 |
| HpaI | GTTAAC | 1 cut(s) | 340 |
| HphI | GGTGA | 1 cut(s) | 398 |
| Hpy166II | GTNNAC | 3 cut(s) | 274, 340, 406 |
| Hpy188I | TCNGA | 1 cut(s) | 186 |
| Hpy188III | TCNNGA | 3 cut(s) | 94, 104, 304 |
| Hpy8I | GTNNAC | 3 cut(s) | 274, 340, 406 |
| HpyAV | CCTTC | 1 cut(s) | 143 |
| HpyCH4III | ACNGT | 4 cut(s) | 38, 337, 379, 415 |
| HpyCH4IV | ACGT | 1 cut(s) | 469 |
| HpyCH4V | TGCA | 2 cut(s) | 4, 221 |
| HpyF3I | CTNAG | 1 cut(s) | 160 |
| HpySE526I | ACGT | 1 cut(s) | 469 |
| Hsp92II | CATG | 5 cut(s) | 8, 32, 259, 371, 385 |
| HspAI | GCGC | 1 cut(s) | 46 |
| KspAI | GTTAAC | 1 cut(s) | 340 |
| Kzo9I | GATC | 2 cut(s) | 96, 390 |
| LmnI | GCTCC | 1 cut(s) | 53 |
| Lsp1109I | GCAGC | 1 cut(s) | 409 |
| LweI | GCATC | 1 cut(s) | 361 |
| MaeI | CTAG | 1 cut(s) | 240 |
| MaeII | ACGT | 1 cut(s) | 469 |
| MaeIII | GTNAC | 2 cut(s) | 155, 203 |
| MalI | GATC | 2 cut(s) | 98, 392 |
| MboI | GATC | 2 cut(s) | 96, 390 |
| MboII | GAAGA | 1 cut(s) | 390 |
| MflI | RGATCY | 1 cut(s) | 96 |
| MluCI | AATT | 3 cut(s) | 169, 247, 429 |
| MnlI | CCTC | 2 cut(s) | 222, 303 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MseI | TTAA | 3 cut(s) | 245, 339, 428 |
| MslI | CAYNNNNRTG | 1 cut(s) | 380 |
| MspR9I | CCNGG | 3 cut(s) | 358, 388, 457 |
| MvaI | CCWGG | 3 cut(s) | 358, 388, 457 |
| NdeII | GATC | 2 cut(s) | 96, 390 |
| NlaIII | CATG | 5 cut(s) | 8, 32, 259, 371, 385 |
| NlaIV | GGNNCC | 1 cut(s) | 280 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PfeI | GAWTC | 1 cut(s) | 123 |
| PfoI | TCCNGGA | 1 cut(s) | 386 |
| PkrI | GCNGC | 1 cut(s) | 424 |
| Ppu21I | YACGTR | 1 cut(s) | 470 |
| Psp6I | CCWGG | 3 cut(s) | 356, 386, 455 |
| PspGI | CCWGG | 3 cut(s) | 356, 386, 455 |
| PspN4I | GGNNCC | 1 cut(s) | 280 |
| PsuI | RGATCY | 1 cut(s) | 96 |
| RsaI | GTAC | 3 cut(s) | 12, 27, 417 |
| RsaNI | GTAC | 3 cut(s) | 11, 26, 416 |
| RseI | CAYNNNNRTG | 1 cut(s) | 380 |
| SaqAI | TTAA | 3 cut(s) | 245, 339, 428 |
| SatI | GCNGC | 1 cut(s) | 423 |
| Sau3AI | GATC | 2 cut(s) | 96, 390 |
| ScrFI | CCNGG | 3 cut(s) | 358, 388, 457 |
| SetI | ASST | 6 cut(s) | 214, 245, 351, 359, 446, 472 |
| SfaNI | GCATC | 1 cut(s) | 361 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 380 |
| Sse9I | AATT | 3 cut(s) | 169, 247, 429 |
| SspI | AATATT | 2 cut(s) | 90, 229 |
| SspMI | CTAG | 1 cut(s) | 240 |
| StyD4I | CCNGG | 3 cut(s) | 356, 386, 455 |
| TaaI | ACNGT | 4 cut(s) | 38, 337, 379, 415 |
| TaiI | ACGT | 1 cut(s) | 472 |
| TaqI | TCGA | 1 cut(s) | 142 |
| TasI | AATT | 3 cut(s) | 169, 247, 429 |
| TatI | WGTACW | 2 cut(s) | 10, 415 |
| TfiI | GAWTC | 1 cut(s) | 123 |
| Tru1I | TTAA | 3 cut(s) | 245, 339, 428 |
| Tru9I | TTAA | 3 cut(s) | 245, 339, 428 |
| TscAI | CASTG | 3 cut(s) | 334, 382, 418 |
| TseI | GCWGC | 1 cut(s) | 422 |
| TspDTI | ATGAA | 1 cut(s) | 244 |
| TspGWI | ACGGA | 1 cut(s) | 291 |
| TspRI | CASTG | 3 cut(s) | 334, 382, 418 |
| XapI | RAATTY | 2 cut(s) | 169, 247 |
| XspI | CTAG | 1 cut(s) | 240 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |