Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcuI | CTGAAG | 1 cut(s) | 489 |
| AfaI | GTAC | 1 cut(s) | 636 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 149 |
| AgsI | TTSAA | 4 cut(s) | 184, 205, 259, 366 |
| AjnI | CCWGG | 1 cut(s) | 439 |
| AluBI | AGCT | 6 cut(s) | 35, 110, 234, 323, 473, 590 |
| AluI | AGCT | 6 cut(s) | 35, 110, 234, 323, 473, 590 |
| Alw21I | GWGCWC | 2 cut(s) | 112, 325 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 467, 527, 593 |
| ApeKI | GCWGC | 4 cut(s) | 378, 488, 491, 590 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 50, 82 |
| BanII | GRGCYC | 2 cut(s) | 112, 325 |
| Bbv12I | GWGCWC | 2 cut(s) | 112, 325 |
| BbvI | GCAGC | 4 cut(s) | 365, 475, 503, 577 |
| BciT130I | CCWGG | 1 cut(s) | 441 |
| BfaI | CTAG | 2 cut(s) | 287, 474 |
| BfmI | CTRYAG | 3 cut(s) | 189, 459, 489 |
| BisI | GCNGC | 4 cut(s) | 379, 489, 492, 591 |
| BlsI | GCNGC | 4 cut(s) | 380, 490, 493, 592 |
| Bme1390I | CCNGG | 1 cut(s) | 441 |
| BmrFI | CCNGG | 1 cut(s) | 441 |
| BmsI | GCATC | 3 cut(s) | 236, 407, 586 |
| BsaJI | CCNNGG | 2 cut(s) | 439, 638 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 149 |
| Bse1I | ACTGG | 4 cut(s) | 82, 97, 154, 532 |
| Bse3DI | GCAATG | 2 cut(s) | 109, 486 |
| BseBI | CCWGG | 1 cut(s) | 441 |
| BseDI | CCNNGG | 2 cut(s) | 439, 638 |
| BseGI | GGATG | 1 cut(s) | 227 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 149 |
| BseMI | GCAATG | 2 cut(s) | 109, 486 |
| BseMII | CTCAG | 3 cut(s) | 521, 580, 636 |
| BseNI | ACTGG | 4 cut(s) | 82, 97, 154, 532 |
| BseRI | GAGGAG | 1 cut(s) | 495 |
| BseXI | GCAGC | 4 cut(s) | 365, 475, 503, 577 |
| BsiHKAI | GWGCWC | 2 cut(s) | 112, 325 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 149 |
| Bsp1286I | GDGCHC | 2 cut(s) | 112, 325 |
| Bsp143I | GATC | 1 cut(s) | 335 |
| BspCNI | CTCAG | 3 cut(s) | 520, 579, 637 |
| BspMAI | CTGCAG | 2 cut(s) | 463, 493 |
| BsrDI | GCAATG | 2 cut(s) | 109, 486 |
| BsrI | ACTGG | 4 cut(s) | 82, 97, 154, 532 |
| BssECI | CCNNGG | 2 cut(s) | 439, 638 |
| BssMI | GATC | 1 cut(s) | 335 |
| BssT1I | CCWWGG | 1 cut(s) | 638 |
| Bst2UI | CCWGG | 1 cut(s) | 441 |
| Bst4CI | ACNGT | 1 cut(s) | 389 |
| Bst6I | CTCTTC | 1 cut(s) | 91 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 485 |
| BstC8I | GCNNGC | 1 cut(s) | 486 |
| BstDEI | CTNAG | 3 cut(s) | 507, 566, 645 |
| BstF5I | GGATG | 1 cut(s) | 227 |
| BstKTI | GATC | 1 cut(s) | 338 |
| BstMBI | GATC | 1 cut(s) | 335 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 485, 500, 596 |
| BstNI | CCWGG | 1 cut(s) | 441 |
| BstSCI | CCNGG | 1 cut(s) | 439 |
| BstSFI | CTRYAG | 3 cut(s) | 189, 459, 489 |
| BstV1I | GCAGC | 4 cut(s) | 365, 475, 503, 577 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 389 |
| BtsCI | GGATG | 1 cut(s) | 227 |
| BtsI | GCAGTG | 1 cut(s) | 405 |
| BtsIMutI | CAGTG | 2 cut(s) | 405, 525 |
| Cac8I | GCNNGC | 1 cut(s) | 486 |
| CaiI | CAGNNNCTG | 3 cut(s) | 467, 527, 593 |
| Csp6I | GTAC | 1 cut(s) | 635 |
| CviAII | CATG | 1 cut(s) | 317 |
| CviQI | GTAC | 1 cut(s) | 635 |
| DdeI | CTNAG | 3 cut(s) | 507, 566, 645 |
| DpnI | GATC | 1 cut(s) | 337 |
| DpnII | GATC | 1 cut(s) | 335 |
| Eam1104I | CTCTTC | 1 cut(s) | 91 |
| EarI | CTCTTC | 1 cut(s) | 91 |
| Ecl136II | GAGCTC | 2 cut(s) | 110, 323 |
| Eco130I | CCWWGG | 1 cut(s) | 638 |
| Eco24I | GRGCYC | 2 cut(s) | 112, 325 |
| Eco53kI | GAGCTC | 2 cut(s) | 110, 323 |
| Eco57I | CTGAAG | 1 cut(s) | 489 |
| EcoICRI | GAGCTC | 2 cut(s) | 110, 323 |
| EcoRII | CCWGG | 1 cut(s) | 439 |
| EcoT14I | CCWWGG | 1 cut(s) | 638 |
| EcoT22I | ATGCAT | 2 cut(s) | 67, 229 |
| EcoT38I | GRGCYC | 2 cut(s) | 112, 325 |
| ErhI | CCWWGG | 1 cut(s) | 638 |
| FaeI | CATG | 1 cut(s) | 320 |
| FatI | CATG | 1 cut(s) | 316 |
| FauNDI | CATATG | 2 cut(s) | 22, 543 |
| Fnu4HI | GCNGC | 4 cut(s) | 379, 489, 492, 591 |
| FokI | GGATG | 1 cut(s) | 214 |
| FriOI | GRGCYC | 2 cut(s) | 112, 325 |
| Fsp4HI | GCNGC | 4 cut(s) | 379, 489, 492, 591 |
| FspBI | CTAG | 2 cut(s) | 287, 474 |
| GluI | GCNGC | 4 cut(s) | 379, 489, 492, 591 |
| Hin1II | CATG | 1 cut(s) | 320 |
| HincII | GTYRAC | 1 cut(s) | 296 |
| HindII | GTYRAC | 1 cut(s) | 296 |
| HinfI | GANTC | 2 cut(s) | 114, 629 |
| Hpy166II | GTNNAC | 1 cut(s) | 296 |
| Hpy188I | TCNGA | 2 cut(s) | 327, 606 |
| Hpy188III | TCNNGA | 2 cut(s) | 56, 353 |
| Hpy8I | GTNNAC | 1 cut(s) | 296 |
| HpyCH4III | ACNGT | 1 cut(s) | 389 |
| HpyCH4V | TGCA | 9 cut(s) | 65, 227, 303, 333, 461, 479, 491, 533, 599 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 485, 500, 596 |
| HpyF3I | CTNAG | 3 cut(s) | 507, 566, 645 |
| Hsp92II | CATG | 1 cut(s) | 320 |
| Kzo9I | GATC | 1 cut(s) | 335 |
| LmnI | GCTCC | 3 cut(s) | 107, 320, 508 |
| Lsp1109I | GCAGC | 4 cut(s) | 365, 475, 503, 577 |
| LweI | GCATC | 3 cut(s) | 236, 407, 586 |
| MaeI | CTAG | 2 cut(s) | 287, 474 |
| MaeIII | GTNAC | 2 cut(s) | 175, 218 |
| MalI | GATC | 1 cut(s) | 337 |
| MboI | GATC | 1 cut(s) | 335 |
| MboII | GAAGA | 3 cut(s) | 108, 406, 409 |
| MhlI | GDGCHC | 2 cut(s) | 112, 325 |
| MluCI | AATT | 3 cut(s) | 6, 346, 429 |
| MnlI | CCTC | 6 cut(s) | 92, 158, 242, 505, 516, 567 |
| Mph1103I | ATGCAT | 2 cut(s) | 67, 229 |
| MseI | TTAA | 1 cut(s) | 39 |
| MspA1I | CMGCKG | 1 cut(s) | 590 |
| MspR9I | CCNGG | 1 cut(s) | 441 |
| MvaI | CCWGG | 1 cut(s) | 441 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 485, 500, 596 |
| NdeI | CATATG | 2 cut(s) | 22, 543 |
| NdeII | GATC | 1 cut(s) | 335 |
| NlaIII | CATG | 1 cut(s) | 320 |
| NsiI | ATGCAT | 2 cut(s) | 67, 229 |
| PfeI | GAWTC | 2 cut(s) | 114, 629 |
| PkrI | GCNGC | 4 cut(s) | 380, 490, 493, 592 |
| Psp124BI | GAGCTC | 2 cut(s) | 112, 325 |
| Psp6I | CCWGG | 1 cut(s) | 439 |
| PspGI | CCWGG | 1 cut(s) | 439 |
| PstI | CTGCAG | 2 cut(s) | 463, 493 |
| PstNI | CAGNNNCTG | 3 cut(s) | 467, 527, 593 |
| PvuII | CAGCTG | 1 cut(s) | 590 |
| RsaI | GTAC | 1 cut(s) | 636 |
| RsaNI | GTAC | 1 cut(s) | 635 |
| SacI | GAGCTC | 2 cut(s) | 112, 325 |
| SaqAI | TTAA | 1 cut(s) | 39 |
| SatI | GCNGC | 4 cut(s) | 379, 489, 492, 591 |
| Sau3AI | GATC | 1 cut(s) | 335 |
| ScrFI | CCNGG | 1 cut(s) | 441 |
| SduI | GDGCHC | 2 cut(s) | 112, 325 |
| SfaNI | GCATC | 3 cut(s) | 236, 407, 586 |
| SfcI | CTRYAG | 3 cut(s) | 189, 459, 489 |
| Sse9I | AATT | 3 cut(s) | 6, 346, 429 |
| SspMI | CTAG | 2 cut(s) | 287, 474 |
| SstI | GAGCTC | 2 cut(s) | 112, 325 |
| StyD4I | CCNGG | 1 cut(s) | 439 |
| StyI | CCWWGG | 1 cut(s) | 638 |
| TaaI | ACNGT | 1 cut(s) | 389 |
| TaqI | TCGA | 1 cut(s) | 112 |
| TaqII | GACCGA | 1 cut(s) | 429 |
| TasI | AATT | 3 cut(s) | 6, 346, 429 |
| TfiI | GAWTC | 2 cut(s) | 114, 629 |
| Tru1I | TTAA | 1 cut(s) | 39 |
| Tru9I | TTAA | 1 cut(s) | 39 |
| TscAI | CASTG | 2 cut(s) | 412, 532 |
| TseI | GCWGC | 4 cut(s) | 378, 488, 491, 590 |
| TspDTI | ATGAA | 1 cut(s) | 415 |
| TspRI | CASTG | 2 cut(s) | 412, 532 |
| XspI | CTAG | 2 cut(s) | 287, 474 |
| Zsp2I | ATGCAT | 2 cut(s) | 67, 229 |