Encoded by
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 272 |
| AatII | GACGTC | 1 cut(s) | 54 |
| AccB1I | GGYRCC | 2 cut(s) | 173, 255 |
| AccBSI | CCGCTC | 1 cut(s) | 367 |
| AccI | GTMKAC | 1 cut(s) | 168 |
| AccII | CGCG | 3 cut(s) | 159, 227, 521 |
| AcoI | YGGCCR | 5 cut(s) | 3, 339, 492, 636, 657 |
| AcsI | RAATTY | 2 cut(s) | 194, 388 |
| AcyI | GRCGYC | 3 cut(s) | 51, 256, 267 |
| AfaI | GTAC | 1 cut(s) | 407 |
| AgsI | TTSAA | 4 cut(s) | 142, 247, 394, 403 |
| AjiI | CACGTC | 1 cut(s) | 378 |
| AjnI | CCWGG | 1 cut(s) | 341 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 356, 388 |
| AluBI | AGCT | 3 cut(s) | 232, 250, 490 |
| AluI | AGCT | 3 cut(s) | 232, 250, 490 |
| Alw26I | GTCTC | 1 cut(s) | 123 |
| Ama87I | CYCGRG | 1 cut(s) | 210 |
| AoxI | GGCC | 7 cut(s) | 3, 144, 151, 339, 492, 636, 657 |
| ApeKI | GCWGC | 3 cut(s) | 229, 313, 604 |
| ApoI | RAATTY | 2 cut(s) | 194, 388 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 183, 215 |
| AseI | ATTAAT | 1 cut(s) | 471 |
| AspLEI | GCGC | 3 cut(s) | 229, 258, 313 |
| AspS9I | GGNCC | 2 cut(s) | 145, 346 |
| AsuC2I | CCSGG | 2 cut(s) | 496, 661 |
| AsuHPI | GGTGA | 3 cut(s) | 226, 460, 517 |
| AvaI | CYCGRG | 1 cut(s) | 210 |
| AvaII | GGWCC | 1 cut(s) | 346 |
| BanI | GGYRCC | 2 cut(s) | 173, 255 |
| BanII | GRGCYC | 1 cut(s) | 222 |
| BbsI | GAAGAC | 1 cut(s) | 130 |
| BbvI | GCAGC | 3 cut(s) | 241, 300, 591 |
| BccI | CCATC | 3 cut(s) | 140, 185, 502 |
| BceAI | ACGGC | 4 cut(s) | 166, 187, 354, 603 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 115, 149 |
| BciT130I | CCWGG | 1 cut(s) | 343 |
| BcnI | CCSGG | 2 cut(s) | 496, 661 |
| BcoDI | GTCTC | 1 cut(s) | 123 |
| BfaI | CTAG | 1 cut(s) | 47 |
| BfmI | CTRYAG | 1 cut(s) | 419 |
| BfoI | RGCGCY | 2 cut(s) | 259, 314 |
| BglI | GCCNNNNNGGC | 2 cut(s) | 159, 644 |
| BisI | GCNGC | 8 cut(s) | 6, 160, 230, 314, 317, 368, 602, 605 |
| BlsI | GCNGC | 8 cut(s) | 7, 161, 231, 315, 318, 369, 603, 606 |
| Bme1390I | CCNGG | 3 cut(s) | 343, 496, 661 |
| Bme18I | GGWCC | 1 cut(s) | 346 |
| BmeT110I | CYCGRG | 1 cut(s) | 210 |
| BmgBI | CACGTC | 1 cut(s) | 378 |
| BmgT120I | GGNCC | 2 cut(s) | 145, 346 |
| BmiI | GGNNCC | 4 cut(s) | 175, 257, 331, 347 |
| BmrFI | CCNGG | 3 cut(s) | 343, 496, 661 |
| BoxI | GACNNNNGTC | 1 cut(s) | 134 |
| BpiI | GAAGAC | 1 cut(s) | 130 |
| BpmI | CTGGAG | 1 cut(s) | 383 |
| BpuMI | CCSGG | 2 cut(s) | 496, 661 |
| BsaHI | GRCGYC | 3 cut(s) | 51, 256, 267 |
| BsaI | GGTCTC | 1 cut(s) | 123 |
| BsaJI | CCNNGG | 5 cut(s) | 148, 157, 211, 342, 639 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 264, 294, 356, 386 |
| BseBI | CCWGG | 1 cut(s) | 343 |
| BseDI | CCNNGG | 5 cut(s) | 148, 157, 211, 342, 639 |
| BseGI | GGATG | 2 cut(s) | 62, 489 |
| BseMII | CTCAG | 1 cut(s) | 533 |
| BseRI | GAGGAG | 7 cut(s) | 13, 16, 19, 47, 292, 572, 656 |
| BseXI | GCAGC | 3 cut(s) | 241, 300, 591 |
| Bsh1236I | CGCG | 3 cut(s) | 159, 227, 521 |
| BshFI | GGCC | 7 cut(s) | 5, 146, 153, 341, 494, 638, 659 |
| BshNI | GGYRCC | 2 cut(s) | 173, 255 |
| BsiHKCI | CYCGRG | 1 cut(s) | 210 |
| BsiSI | CCGG | 4 cut(s) | 270, 495, 554, 660 |
| BslFI | GGGAC | 1 cut(s) | 359 |
| BsmAI | GTCTC | 1 cut(s) | 123 |
| BsmFI | GGGAC | 1 cut(s) | 359 |
| BsnI | GGCC | 7 cut(s) | 5, 146, 153, 341, 494, 638, 659 |
| Bso31I | GGTCTC | 1 cut(s) | 123 |
| BsoBI | CYCGRG | 1 cut(s) | 210 |
| Bsp1286I | GDGCHC | 1 cut(s) | 222 |
| Bsp143I | GATC | 1 cut(s) | 415 |
| BspANI | GGCC | 7 cut(s) | 5, 146, 153, 341, 494, 638, 659 |
| BspCNI | CTCAG | 1 cut(s) | 534 |
| BspFNI | CGCG | 3 cut(s) | 159, 227, 521 |
| BspLI | GGNNCC | 4 cut(s) | 175, 257, 331, 347 |
| BspMAI | CTGCAG | 1 cut(s) | 423 |
| BspT107I | GGYRCC | 2 cut(s) | 173, 255 |
| BspTNI | GGTCTC | 1 cut(s) | 123 |
| BsrBI | CCGCTC | 1 cut(s) | 367 |
| BssECI | CCNNGG | 5 cut(s) | 148, 157, 211, 342, 639 |
| BssMI | GATC | 1 cut(s) | 415 |
| BssNI | GRCGYC | 3 cut(s) | 51, 256, 267 |
| Bst2UI | CCWGG | 1 cut(s) | 343 |
| BstACI | GRCGYC | 3 cut(s) | 51, 256, 267 |
| BstC8I | GCNNGC | 3 cut(s) | 218, 492, 636 |
| BstDEI | CTNAG | 1 cut(s) | 542 |
| BstDSI | CCRYGG | 2 cut(s) | 148, 157 |
| BstF5I | GGATG | 2 cut(s) | 62, 489 |
| BstFNI | CGCG | 3 cut(s) | 159, 227, 521 |
| BstH2I | RGCGCY | 2 cut(s) | 259, 314 |
| BstHHI | GCGC | 3 cut(s) | 229, 258, 313 |
| BstKTI | GATC | 1 cut(s) | 418 |
| BstMAI | GTCTC | 1 cut(s) | 123 |
| BstMBI | GATC | 1 cut(s) | 415 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 159, 226, 367, 644 |
| BstNI | CCWGG | 1 cut(s) | 343 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 134 |
| BstSCI | CCNGG | 3 cut(s) | 341, 494, 659 |
| BstSFI | CTRYAG | 1 cut(s) | 419 |
| BstUI | CGCG | 3 cut(s) | 159, 227, 521 |
| BstV1I | GCAGC | 3 cut(s) | 241, 300, 591 |
| BstV2I | GAAGAC | 1 cut(s) | 130 |
| BsuRI | GGCC | 7 cut(s) | 5, 146, 153, 341, 494, 638, 659 |
| BtgI | CCRYGG | 2 cut(s) | 148, 157 |
| BtrI | CACGTC | 1 cut(s) | 378 |
| BtsCI | GGATG | 2 cut(s) | 62, 489 |
| Cac8I | GCNNGC | 3 cut(s) | 218, 492, 636 |
| CfoI | GCGC | 3 cut(s) | 229, 258, 313 |
| Cfr13I | GGNCC | 2 cut(s) | 145, 346 |
| Cfr42I | CCGCGG | 1 cut(s) | 160 |
| CseI | GACGC | 3 cut(s) | 275, 367, 527 |
| Csp6I | GTAC | 1 cut(s) | 406 |
| CviAII | CATG | 3 cut(s) | 79, 127, 536 |
| CviQI | GTAC | 1 cut(s) | 406 |
| DdeI | CTNAG | 1 cut(s) | 542 |
| DinI | GGCGCC | 1 cut(s) | 257 |
| DpnI | GATC | 1 cut(s) | 417 |
| DpnII | GATC | 1 cut(s) | 415 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 272 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 272 |
| EaeI | YGGCCR | 5 cut(s) | 3, 339, 492, 636, 657 |
| Eco24I | GRGCYC | 1 cut(s) | 222 |
| Eco31I | GGTCTC | 1 cut(s) | 123 |
| Eco47I | GGWCC | 1 cut(s) | 346 |
| Eco88I | CYCGRG | 1 cut(s) | 210 |
| EcoO109I | RGGNCCY | 1 cut(s) | 346 |
| EcoRII | CCWGG | 1 cut(s) | 341 |
| EcoT38I | GRGCYC | 1 cut(s) | 222 |
| EgeI | GGCGCC | 1 cut(s) | 257 |
| EheI | GGCGCC | 1 cut(s) | 257 |
| FaeI | CATG | 3 cut(s) | 82, 130, 539 |
| FaiI | YATR | 7 cut(s) | 68, 70, 80, 128, 537, 564, 624 |
| FaqI | GGGAC | 1 cut(s) | 359 |
| FatI | CATG | 3 cut(s) | 78, 126, 535 |
| FauI | CCCGC | 1 cut(s) | 95 |
| FauNDI | CATATG | 1 cut(s) | 68 |
| FblI | GTMKAC | 1 cut(s) | 168 |
| Fnu4HI | GCNGC | 8 cut(s) | 6, 160, 230, 314, 317, 368, 602, 605 |
| FokI | GGATG | 2 cut(s) | 49, 496 |
| FriOI | GRGCYC | 1 cut(s) | 222 |
| Fsp4HI | GCNGC | 8 cut(s) | 6, 160, 230, 314, 317, 368, 602, 605 |
| FspBI | CTAG | 1 cut(s) | 47 |
| GlaI | GCGC | 3 cut(s) | 228, 257, 312 |
| GluI | GCNGC | 8 cut(s) | 6, 160, 230, 314, 317, 368, 602, 605 |
| GsuI | CTGGAG | 1 cut(s) | 383 |
| HaeII | RGCGCY | 2 cut(s) | 259, 314 |
| HaeIII | GGCC | 7 cut(s) | 5, 146, 153, 341, 494, 638, 659 |
| HapII | CCGG | 4 cut(s) | 270, 495, 554, 660 |
| HgaI | GACGC | 3 cut(s) | 275, 367, 527 |
| HhaI | GCGC | 3 cut(s) | 229, 258, 313 |
| Hin1I | GRCGYC | 3 cut(s) | 51, 256, 267 |
| Hin1II | CATG | 3 cut(s) | 82, 130, 539 |
| Hin6I | GCGC | 3 cut(s) | 227, 256, 311 |
| HinP1I | GCGC | 3 cut(s) | 227, 256, 311 |
| HincII | GTYRAC | 1 cut(s) | 169 |
| HindII | GTYRAC | 1 cut(s) | 169 |
| HinfI | GANTC | 4 cut(s) | 95, 273, 443, 664 |
| HpaII | CCGG | 4 cut(s) | 270, 495, 554, 660 |
| HphI | GGTGA | 3 cut(s) | 226, 460, 517 |
| Hpy166II | GTNNAC | 3 cut(s) | 169, 375, 514 |
| Hpy188I | TCNGA | 5 cut(s) | 241, 334, 415, 543, 576 |
| Hpy188III | TCNNGA | 2 cut(s) | 181, 400 |
| Hpy8I | GTNNAC | 3 cut(s) | 169, 375, 514 |
| Hpy99I | CGWCG | 7 cut(s) | 126, 170, 173, 269, 310, 382, 521 |
| HpyAV | CCTTC | 1 cut(s) | 427 |
| HpyCH4IV | ACGT | 3 cut(s) | 51, 165, 377 |
| HpyCH4V | TGCA | 2 cut(s) | 72, 421 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 159, 226, 367, 644 |
| HpyF3I | CTNAG | 1 cut(s) | 542 |
| HpySE526I | ACGT | 3 cut(s) | 51, 165, 377 |
| Hsp92I | GRCGYC | 3 cut(s) | 51, 256, 267 |
| Hsp92II | CATG | 3 cut(s) | 82, 130, 539 |
| HspAI | GCGC | 3 cut(s) | 227, 256, 311 |
| KasI | GGCGCC | 1 cut(s) | 255 |
| KspI | CCGCGG | 1 cut(s) | 160 |
| Kzo9I | GATC | 1 cut(s) | 415 |
| LmnI | GCTCC | 2 cut(s) | 335, 364 |
| Lsp1109I | GCAGC | 3 cut(s) | 241, 300, 591 |
| MaeI | CTAG | 1 cut(s) | 47 |
| MaeII | ACGT | 3 cut(s) | 51, 165, 377 |
| MalI | GATC | 1 cut(s) | 417 |
| MbiI | CCGCTC | 1 cut(s) | 367 |
| MboI | GATC | 1 cut(s) | 415 |
| MboII | GAAGA | 1 cut(s) | 130 |
| MhlI | GDGCHC | 1 cut(s) | 222 |
| MluCI | AATT | 2 cut(s) | 194, 388 |
| Mly113I | GGCGCC | 1 cut(s) | 256 |
| MlyI | GAGTC | 2 cut(s) | 282, 437 |
| MmeI | TCCRAC | 2 cut(s) | 264, 357 |
| MseI | TTAA | 1 cut(s) | 471 |
| MslI | CAYNNNNRTG | 2 cut(s) | 67, 380 |
| MspA1I | CMGCKG | 2 cut(s) | 159, 604 |
| MspI | CCGG | 4 cut(s) | 270, 495, 554, 660 |
| MspR9I | CCNGG | 3 cut(s) | 343, 496, 661 |
| MvaI | CCWGG | 1 cut(s) | 343 |
| MvnI | CGCG | 3 cut(s) | 159, 227, 521 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 159, 226, 367, 644 |
| NarI | GGCGCC | 1 cut(s) | 256 |
| NciI | CCSGG | 2 cut(s) | 496, 661 |
| NdeI | CATATG | 1 cut(s) | 68 |
| NdeII | GATC | 1 cut(s) | 415 |
| NlaIII | CATG | 3 cut(s) | 82, 130, 539 |
| NlaIV | GGNNCC | 4 cut(s) | 175, 257, 331, 347 |
| NmeAIII | GCCGAG | 1 cut(s) | 664 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 213, 302, 383, 587 |
| PfeI | GAWTC | 2 cut(s) | 95, 664 |
| PkrI | GCNGC | 8 cut(s) | 7, 161, 231, 315, 318, 369, 603, 606 |
| PleI | GAGTC | 2 cut(s) | 281, 437 |
| PluTI | GGCGCC | 1 cut(s) | 259 |
| PpsI | GAGTC | 2 cut(s) | 281, 437 |
| PpuMI | RGGWCCY | 1 cut(s) | 346 |
| PshAI | GACNNNNGTC | 1 cut(s) | 134 |
| PshBI | ATTAAT | 1 cut(s) | 471 |
| Psp5II | RGGWCCY | 1 cut(s) | 346 |
| Psp6I | CCWGG | 1 cut(s) | 341 |
| PspGI | CCWGG | 1 cut(s) | 341 |
| PspN4I | GGNNCC | 4 cut(s) | 175, 257, 331, 347 |
| PspPI | GGNCC | 2 cut(s) | 145, 346 |
| PspPPI | RGGWCCY | 1 cut(s) | 346 |
| PstI | CTGCAG | 1 cut(s) | 423 |
| RsaI | GTAC | 1 cut(s) | 407 |
| RsaNI | GTAC | 1 cut(s) | 406 |
| RseI | CAYNNNNRTG | 2 cut(s) | 67, 380 |
| SacII | CCGCGG | 1 cut(s) | 160 |
| SalI | GTCGAC | 1 cut(s) | 167 |
| SaqAI | TTAA | 1 cut(s) | 471 |
| SatI | GCNGC | 8 cut(s) | 6, 160, 230, 314, 317, 368, 602, 605 |
| Sau3AI | GATC | 1 cut(s) | 415 |
| Sau96I | GGNCC | 2 cut(s) | 145, 346 |
| SchI | GAGTC | 2 cut(s) | 282, 437 |
| ScrFI | CCNGG | 3 cut(s) | 343, 496, 661 |
| SduI | GDGCHC | 1 cut(s) | 222 |
| SfcI | CTRYAG | 1 cut(s) | 419 |
| SfoI | GGCGCC | 1 cut(s) | 257 |
| Sfr303I | CCGCGG | 1 cut(s) | 160 |
| SgrBI | CCGCGG | 1 cut(s) | 160 |
| SgrDI | CGTCGACG | 1 cut(s) | 167 |
| SinI | GGWCC | 1 cut(s) | 346 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 67, 380 |
| Sse9I | AATT | 2 cut(s) | 194, 388 |
| SspDI | GGCGCC | 1 cut(s) | 255 |
| SspMI | CTAG | 1 cut(s) | 47 |
| StyD4I | CCNGG | 3 cut(s) | 341, 494, 659 |
| TaiI | ACGT | 3 cut(s) | 54, 168, 380 |
| TaqI | TCGA | 5 cut(s) | 93, 168, 380, 386, 581 |
| TasI | AATT | 2 cut(s) | 194, 388 |
| TatI | WGTACW | 1 cut(s) | 405 |
| TauI | GCSGC | 5 cut(s) | 8, 162, 319, 370, 604 |
| TfiI | GAWTC | 2 cut(s) | 95, 664 |
| Tru1I | TTAA | 1 cut(s) | 471 |
| Tru9I | TTAA | 1 cut(s) | 471 |
| TseI | GCWGC | 3 cut(s) | 229, 313, 604 |
| TspDTI | ATGAA | 2 cut(s) | 100, 500 |
| VpaK11BI | GGWCC | 1 cut(s) | 346 |
| VspI | ATTAAT | 1 cut(s) | 471 |
| XapI | RAATTY | 2 cut(s) | 194, 388 |
| XmiI | GTMKAC | 1 cut(s) | 168 |
| XspI | CTAG | 1 cut(s) | 47 |
| ZraI | GACGTC | 1 cut(s) | 52 |