cysteine-rich RLK (RECEPTOR-like protein kinase) 8
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 2 - 138 | 6e-21 | gag-polypeptide of LTR copia-type |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 517, 781 |
| AcsI | RAATTY | 2 cut(s) | 816, 909 |
| AcuI | CTGAAG | 1 cut(s) | 941 |
| AfaI | GTAC | 1 cut(s) | 221 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 724 |
| AflIII | ACRYGT | 1 cut(s) | 928 |
| AgsI | TTSAA | 4 cut(s) | 185, 227, 628, 1041 |
| AjnI | CCWGG | 1 cut(s) | 575 |
| AluBI | AGCT | 8 cut(s) | 35, 155, 169, 238, 258, 389, 492, 1053 |
| AluI | AGCT | 8 cut(s) | 35, 155, 169, 238, 258, 389, 492, 1053 |
| Alw21I | GWGCWC | 2 cut(s) | 260, 391 |
| Alw26I | GTCTC | 2 cut(s) | 522, 573 |
| AlwI | GGATC | 2 cut(s) | 517, 781 |
| AoxI | GGCC | 1 cut(s) | 3 |
| ApeKI | GCWGC | 2 cut(s) | 401, 458 |
| ApoI | RAATTY | 2 cut(s) | 816, 909 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 380 |
| AsuHPI | GGTGA | 2 cut(s) | 80, 1091 |
| AsuNHI | GCTAGC | 1 cut(s) | 737 |
| BanII | GRGCYC | 2 cut(s) | 260, 391 |
| BbsI | GAAGAC | 1 cut(s) | 38 |
| Bbv12I | GWGCWC | 2 cut(s) | 260, 391 |
| BbvCI | CCTCAGC | 1 cut(s) | 1065 |
| BbvI | GCAGC | 2 cut(s) | 388, 445 |
| BccI | CCATC | 2 cut(s) | 59, 954 |
| BceAI | ACGGC | 1 cut(s) | 855 |
| BciT130I | CCWGG | 1 cut(s) | 577 |
| BclI | TGATCA | 1 cut(s) | 877 |
| BcoDI | GTCTC | 2 cut(s) | 522, 573 |
| BfaI | CTAG | 3 cut(s) | 150, 738, 1050 |
| BfmI | CTRYAG | 1 cut(s) | 856 |
| BisI | GCNGC | 2 cut(s) | 402, 459 |
| BlsI | GCNGC | 2 cut(s) | 403, 460 |
| Bme1390I | CCNGG | 1 cut(s) | 577 |
| BmrFI | CCNGG | 1 cut(s) | 577 |
| BmsI | GCATC | 1 cut(s) | 1197 |
| BmtI | GCTAGC | 1 cut(s) | 741 |
| BpiI | GAAGAC | 1 cut(s) | 38 |
| BpmI | CTGGAG | 2 cut(s) | 525, 789 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1065 |
| BpuEI | CTTGAG | 4 cut(s) | 149, 595, 753, 1135 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 724 |
| Bse1I | ACTGG | 3 cut(s) | 402, 1021, 1090 |
| Bse3DI | GCAATG | 4 cut(s) | 336, 459, 732, 1128 |
| BseBI | CCWGG | 1 cut(s) | 577 |
| BseGI | GGATG | 2 cut(s) | 880, 1135 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 724 |
| BseMI | GCAATG | 4 cut(s) | 336, 459, 732, 1128 |
| BseMII | CTCAG | 4 cut(s) | 584, 669, 768, 1056 |
| BseNI | ACTGG | 3 cut(s) | 402, 1021, 1090 |
| BseRI | GAGGAG | 1 cut(s) | 876 |
| BseXI | GCAGC | 2 cut(s) | 388, 445 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiHKAI | GWGCWC | 2 cut(s) | 260, 391 |
| BsiSI | CCGG | 1 cut(s) | 758 |
| BslFI | GGGAC | 2 cut(s) | 846, 939 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 724 |
| BsmAI | GTCTC | 2 cut(s) | 522, 573 |
| BsmFI | GGGAC | 2 cut(s) | 846, 939 |
| BsnI | GGCC | 1 cut(s) | 5 |
| Bsp1286I | GDGCHC | 2 cut(s) | 260, 391 |
| Bsp143I | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspCNI | CTCAG | 4 cut(s) | 583, 670, 769, 1057 |
| BspOI | GCTAGC | 1 cut(s) | 741 |
| BspPI | GGATC | 2 cut(s) | 517, 781 |
| BsrDI | GCAATG | 4 cut(s) | 336, 459, 732, 1128 |
| BsrI | ACTGG | 3 cut(s) | 402, 1021, 1090 |
| BssMI | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| Bst2UI | CCWGG | 1 cut(s) | 577 |
| Bst4CI | ACNGT | 4 cut(s) | 15, 145, 343, 851 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 458 |
| BstC8I | GCNNGC | 3 cut(s) | 120, 240, 739 |
| BstDEI | CTNAG | 5 cut(s) | 564, 570, 678, 777, 1065 |
| BstF5I | GGATG | 2 cut(s) | 880, 1135 |
| BstKTI | GATC | 5 cut(s) | 181, 250, 512, 776, 880 |
| BstMAI | GTCTC | 2 cut(s) | 522, 573 |
| BstMBI | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 119, 458, 489, 1007, 1194 |
| BstNI | CCWGG | 1 cut(s) | 577 |
| BstNSI | RCATGY | 1 cut(s) | 932 |
| BstSCI | CCNGG | 1 cut(s) | 575 |
| BstSFI | CTRYAG | 1 cut(s) | 856 |
| BstV1I | GCAGC | 2 cut(s) | 388, 445 |
| BstV2I | GAAGAC | 1 cut(s) | 38 |
| BstX2I | RGATCY | 1 cut(s) | 773 |
| BstYI | RGATCY | 1 cut(s) | 773 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 2 cut(s) | 880, 1135 |
| BtsI | GCAGTG | 2 cut(s) | 422, 996 |
| BtsIMutI | CAGTG | 6 cut(s) | 302, 371, 422, 900, 996, 1014 |
| Cac8I | GCNNGC | 3 cut(s) | 120, 240, 739 |
| Csp6I | GTAC | 1 cut(s) | 220 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 595, 630 |
| CviAII | CATG | 4 cut(s) | 76, 107, 929, 1102 |
| CviQI | GTAC | 1 cut(s) | 220 |
| DdeI | CTNAG | 5 cut(s) | 564, 570, 678, 777, 1065 |
| DpnI | GATC | 5 cut(s) | 180, 249, 511, 775, 879 |
| DpnII | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| Ecl136II | GAGCTC | 2 cut(s) | 258, 389 |
| Eco24I | GRGCYC | 2 cut(s) | 260, 391 |
| Eco32I | GATATC | 1 cut(s) | 73 |
| Eco53kI | GAGCTC | 2 cut(s) | 258, 389 |
| Eco57I | CTGAAG | 1 cut(s) | 941 |
| EcoICRI | GAGCTC | 2 cut(s) | 258, 389 |
| EcoRII | CCWGG | 1 cut(s) | 575 |
| EcoRV | GATATC | 1 cut(s) | 73 |
| EcoT38I | GRGCYC | 2 cut(s) | 260, 391 |
| FaeI | CATG | 4 cut(s) | 79, 110, 932, 1105 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 24, 56, 1186, 1218 |
| FaqI | GGGAC | 2 cut(s) | 846, 939 |
| FatI | CATG | 4 cut(s) | 75, 106, 928, 1101 |
| FauNDI | CATATG | 1 cut(s) | 438 |
| FbaI | TGATCA | 1 cut(s) | 877 |
| Fnu4HI | GCNGC | 2 cut(s) | 402, 459 |
| FokI | GGATG | 2 cut(s) | 867, 1122 |
| FriOI | GRGCYC | 2 cut(s) | 260, 391 |
| Fsp4HI | GCNGC | 2 cut(s) | 402, 459 |
| FspBI | CTAG | 3 cut(s) | 150, 738, 1050 |
| GluI | GCNGC | 2 cut(s) | 402, 459 |
| GsuI | CTGGAG | 2 cut(s) | 525, 789 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 1 cut(s) | 758 |
| Hin1II | CATG | 4 cut(s) | 79, 110, 932, 1105 |
| HindIII | AAGCTT | 1 cut(s) | 236 |
| HinfI | GANTC | 2 cut(s) | 419, 754 |
| HpaII | CCGG | 1 cut(s) | 758 |
| HphI | GGTGA | 2 cut(s) | 80, 1091 |
| Hpy166II | GTNNAC | 1 cut(s) | 917 |
| Hpy188I | TCNGA | 6 cut(s) | 386, 573, 753, 778, 979, 1111 |
| Hpy188III | TCNNGA | 6 cut(s) | 62, 150, 504, 628, 806, 875 |
| Hpy8I | GTNNAC | 1 cut(s) | 917 |
| HpyAV | CCTTC | 6 cut(s) | 233, 823, 894, 916, 1172, 1209 |
| HpyCH4III | ACNGT | 4 cut(s) | 15, 145, 343, 851 |
| HpyCH4IV | ACGT | 2 cut(s) | 229, 982 |
| HpyCH4V | TGCA | 8 cut(s) | 122, 242, 329, 452, 461, 822, 1031, 1091 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 119, 458, 489, 1007, 1194 |
| HpyF3I | CTNAG | 5 cut(s) | 564, 570, 678, 777, 1065 |
| HpySE526I | ACGT | 2 cut(s) | 229, 982 |
| Hsp92II | CATG | 4 cut(s) | 79, 110, 932, 1105 |
| Ksp22I | TGATCA | 1 cut(s) | 877 |
| Kzo9I | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| LmnI | GCTCC | 1 cut(s) | 200 |
| Lsp1109I | GCAGC | 2 cut(s) | 388, 445 |
| LweI | GCATC | 1 cut(s) | 1197 |
| MaeI | CTAG | 3 cut(s) | 150, 738, 1050 |
| MaeII | ACGT | 2 cut(s) | 229, 982 |
| MaeIII | GTNAC | 6 cut(s) | 268, 298, 420, 683, 707, 728 |
| MalI | GATC | 5 cut(s) | 180, 249, 511, 775, 879 |
| MboI | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| MboII | GAAGA | 5 cut(s) | 31, 38, 173, 296, 1029 |
| MfeI | CAATTG | 2 cut(s) | 251, 1164 |
| MflI | RGATCY | 1 cut(s) | 773 |
| MhlI | GDGCHC | 2 cut(s) | 260, 391 |
| MluCI | AATT | 8 cut(s) | 251, 366, 392, 631, 699, 816, 909, 1164 |
| MlyI | GAGTC | 1 cut(s) | 428 |
| MmeI | TCCRAC | 2 cut(s) | 244, 1173 |
| MroXI | GAANNNNTTC | 1 cut(s) | 380 |
| MseI | TTAA | 3 cut(s) | 192, 234, 939 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1001 |
| MspI | CCGG | 1 cut(s) | 758 |
| MspR9I | CCNGG | 1 cut(s) | 577 |
| MunI | CAATTG | 2 cut(s) | 251, 1164 |
| MvaI | CCWGG | 1 cut(s) | 577 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 119, 458, 489, 1007, 1194 |
| NdeI | CATATG | 1 cut(s) | 438 |
| NdeII | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| NheI | GCTAGC | 1 cut(s) | 737 |
| NlaIII | CATG | 4 cut(s) | 79, 110, 932, 1105 |
| NmuCI | GTSAC | 4 cut(s) | 298, 420, 707, 728 |
| NspI | RCATGY | 1 cut(s) | 932 |
| PciI | ACATGT | 1 cut(s) | 928 |
| PdmI | GAANNNNTTC | 1 cut(s) | 380 |
| PfeI | GAWTC | 1 cut(s) | 754 |
| PkrI | GCNGC | 2 cut(s) | 403, 460 |
| PleI | GAGTC | 1 cut(s) | 427 |
| PpsI | GAGTC | 1 cut(s) | 427 |
| PscI | ACATGT | 1 cut(s) | 928 |
| Psp124BI | GAGCTC | 2 cut(s) | 260, 391 |
| Psp6I | CCWGG | 1 cut(s) | 575 |
| PspGI | CCWGG | 1 cut(s) | 575 |
| PsuI | RGATCY | 1 cut(s) | 773 |
| RsaI | GTAC | 1 cut(s) | 221 |
| RsaNI | GTAC | 1 cut(s) | 220 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1001 |
| SacI | GAGCTC | 2 cut(s) | 260, 391 |
| SaqAI | TTAA | 3 cut(s) | 192, 234, 939 |
| SatI | GCNGC | 2 cut(s) | 402, 459 |
| Sau3AI | GATC | 5 cut(s) | 178, 247, 509, 773, 877 |
| SchI | GAGTC | 1 cut(s) | 428 |
| ScrFI | CCNGG | 1 cut(s) | 577 |
| SduI | GDGCHC | 2 cut(s) | 260, 391 |
| SfaNI | GCATC | 1 cut(s) | 1197 |
| SfcI | CTRYAG | 1 cut(s) | 856 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1001 |
| SmlI | CTYRAG | 4 cut(s) | 128, 610, 768, 1114 |
| SmoI | CTYRAG | 4 cut(s) | 128, 610, 768, 1114 |
| Sse9I | AATT | 8 cut(s) | 251, 366, 392, 631, 699, 816, 909, 1164 |
| SspMI | CTAG | 3 cut(s) | 150, 738, 1050 |
| SstI | GAGCTC | 2 cut(s) | 260, 391 |
| StyD4I | CCNGG | 1 cut(s) | 575 |
| TaaI | ACNGT | 4 cut(s) | 15, 145, 343, 851 |
| TaiI | ACGT | 2 cut(s) | 232, 985 |
| TasI | AATT | 8 cut(s) | 251, 366, 392, 631, 699, 816, 909, 1164 |
| TfiI | GAWTC | 1 cut(s) | 754 |
| Tru1I | TTAA | 3 cut(s) | 192, 234, 939 |
| Tru9I | TTAA | 3 cut(s) | 192, 234, 939 |
| TscAI | CASTG | 6 cut(s) | 309, 378, 429, 900, 1003, 1021 |
| TseFI | GTSAC | 4 cut(s) | 298, 420, 707, 728 |
| TseI | GCWGC | 2 cut(s) | 401, 458 |
| Tsp45I | GTSAC | 4 cut(s) | 298, 420, 707, 728 |
| TspDTI | ATGAA | 3 cut(s) | 297, 336, 459 |
| TspRI | CASTG | 6 cut(s) | 309, 378, 429, 900, 1003, 1021 |
| XapI | RAATTY | 2 cut(s) | 816, 909 |
| XbaI | TCTAGA | 1 cut(s) | 149 |
| XceI | RCATGY | 1 cut(s) | 932 |
| XmnI | GAANNNNTTC | 1 cut(s) | 380 |
| XspI | CTAG | 3 cut(s) | 150, 738, 1050 |