transposition, RNA-mediated
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 74 |
| AciI | CCGC | 2 cut(s) | 77, 138 |
| AcoI | YGGCCR | 1 cut(s) | 156 |
| AcuI | CTGAAG | 1 cut(s) | 53 |
| AhlI | ACTAGT | 1 cut(s) | 214 |
| AjnI | CCWGG | 1 cut(s) | 330 |
| AluBI | AGCT | 3 cut(s) | 37, 173, 202 |
| AluI | AGCT | 3 cut(s) | 37, 173, 202 |
| Alw21I | GWGCWC | 1 cut(s) | 175 |
| Alw26I | GTCTC | 1 cut(s) | 22 |
| AoxI | GGCC | 1 cut(s) | 156 |
| ApeKI | GCWGC | 5 cut(s) | 43, 46, 80, 149, 202 |
| AsuHPI | GGTGA | 2 cut(s) | 116, 326 |
| BalI | TGGCCA | 1 cut(s) | 158 |
| BanII | GRGCYC | 1 cut(s) | 175 |
| Bbv12I | GWGCWC | 1 cut(s) | 175 |
| BbvI | GCAGC | 5 cut(s) | 30, 33, 67, 136, 189 |
| BccI | CCATC | 2 cut(s) | 95, 329 |
| BceAI | ACGGC | 1 cut(s) | 364 |
| BciT130I | CCWGG | 1 cut(s) | 332 |
| BclI | TGATCA | 1 cut(s) | 165 |
| BcoDI | GTCTC | 1 cut(s) | 22 |
| BcuI | ACTAGT | 1 cut(s) | 214 |
| BfaI | CTAG | 1 cut(s) | 215 |
| BfmI | CTRYAG | 1 cut(s) | 81 |
| BfuAI | ACCTGC | 1 cut(s) | 74 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 55 |
| BisI | GCNGC | 6 cut(s) | 44, 47, 78, 81, 150, 203 |
| BlsI | GCNGC | 6 cut(s) | 45, 48, 79, 82, 151, 204 |
| Bme1390I | CCNGG | 1 cut(s) | 332 |
| BmrFI | CCNGG | 1 cut(s) | 332 |
| BmsI | GCATC | 1 cut(s) | 172 |
| BpmI | CTGGAG | 1 cut(s) | 177 |
| BsaBI | GATNNNNATC | 1 cut(s) | 339 |
| BsaJI | CCNNGG | 2 cut(s) | 68, 153 |
| Bse1I | ACTGG | 1 cut(s) | 25 |
| Bse8I | GATNNNNATC | 1 cut(s) | 339 |
| BseBI | CCWGG | 1 cut(s) | 332 |
| BseDI | CCNNGG | 2 cut(s) | 68, 153 |
| BseGI | GGATG | 1 cut(s) | 340 |
| BseJI | GATNNNNATC | 1 cut(s) | 339 |
| BseNI | ACTGG | 1 cut(s) | 25 |
| BseRI | GAGGAG | 1 cut(s) | 212 |
| BseXI | GCAGC | 5 cut(s) | 30, 33, 67, 136, 189 |
| BseYI | CCCAGC | 2 cut(s) | 37, 53 |
| BshFI | GGCC | 1 cut(s) | 158 |
| BsiHKAI | GWGCWC | 1 cut(s) | 175 |
| BslFI | GGGAC | 1 cut(s) | 359 |
| BsmAI | GTCTC | 1 cut(s) | 22 |
| BsmFI | GGGAC | 1 cut(s) | 359 |
| BsnI | GGCC | 1 cut(s) | 158 |
| Bsp1286I | GDGCHC | 1 cut(s) | 175 |
| Bsp143I | GATC | 2 cut(s) | 165, 176 |
| Bsp19I | CCATGG | 1 cut(s) | 68 |
| BspACI | CCGC | 2 cut(s) | 77, 138 |
| BspANI | GGCC | 1 cut(s) | 158 |
| BspMAI | CTGCAG | 1 cut(s) | 85 |
| BspMI | ACCTGC | 1 cut(s) | 74 |
| BsrI | ACTGG | 1 cut(s) | 25 |
| BssECI | CCNNGG | 2 cut(s) | 68, 153 |
| BssMI | GATC | 2 cut(s) | 165, 176 |
| BssT1I | CCWWGG | 2 cut(s) | 68, 153 |
| Bst2UI | CCWGG | 1 cut(s) | 332 |
| Bst4CI | ACNGT | 1 cut(s) | 326 |
| BstC8I | GCNNGC | 2 cut(s) | 51, 75 |
| BstDSI | CCRYGG | 1 cut(s) | 68 |
| BstEII | GGTNACC | 1 cut(s) | 326 |
| BstF5I | GGATG | 1 cut(s) | 340 |
| BstKTI | GATC | 2 cut(s) | 168, 179 |
| BstMAI | GTCTC | 1 cut(s) | 22 |
| BstMBI | GATC | 2 cut(s) | 165, 176 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 21, 43, 55, 64, 146, 155 |
| BstNI | CCWGG | 1 cut(s) | 332 |
| BstNSI | RCATGY | 1 cut(s) | 122 |
| BstPI | GGTNACC | 1 cut(s) | 326 |
| BstSCI | CCNGG | 1 cut(s) | 330 |
| BstSFI | CTRYAG | 1 cut(s) | 81 |
| BstV1I | GCAGC | 5 cut(s) | 30, 33, 67, 136, 189 |
| BsuRI | GGCC | 1 cut(s) | 158 |
| BtgI | CCRYGG | 1 cut(s) | 68 |
| BtsCI | GGATG | 1 cut(s) | 340 |
| BtsI | GCAGTG | 1 cut(s) | 62 |
| BtsIMutI | CAGTG | 1 cut(s) | 62 |
| BveI | ACCTGC | 1 cut(s) | 74 |
| Cac8I | GCNNGC | 2 cut(s) | 51, 75 |
| CviAII | CATG | 3 cut(s) | 69, 119, 206 |
| DpnI | GATC | 2 cut(s) | 167, 178 |
| DpnII | GATC | 2 cut(s) | 165, 176 |
| EaeI | YGGCCR | 1 cut(s) | 156 |
| Ecl136II | GAGCTC | 1 cut(s) | 173 |
| Eco130I | CCWWGG | 2 cut(s) | 68, 153 |
| Eco24I | GRGCYC | 1 cut(s) | 175 |
| Eco53kI | GAGCTC | 1 cut(s) | 173 |
| Eco57I | CTGAAG | 1 cut(s) | 53 |
| Eco91I | GGTNACC | 1 cut(s) | 326 |
| EcoICRI | GAGCTC | 1 cut(s) | 173 |
| EcoO65I | GGTNACC | 1 cut(s) | 326 |
| EcoRII | CCWGG | 1 cut(s) | 330 |
| EcoT14I | CCWWGG | 2 cut(s) | 68, 153 |
| EcoT38I | GRGCYC | 1 cut(s) | 175 |
| ErhI | CCWWGG | 2 cut(s) | 68, 153 |
| FaeI | CATG | 3 cut(s) | 72, 122, 209 |
| FaiI | YATR | 8 cut(s) | 70, 120, 147, 207, 250, 252, 270, 357 |
| FaqI | GGGAC | 1 cut(s) | 359 |
| FatI | CATG | 3 cut(s) | 68, 118, 205 |
| FbaI | TGATCA | 1 cut(s) | 165 |
| Fnu4HI | GCNGC | 6 cut(s) | 44, 47, 78, 81, 150, 203 |
| FokI | GGATG | 1 cut(s) | 347 |
| FriOI | GRGCYC | 1 cut(s) | 175 |
| Fsp4HI | GCNGC | 6 cut(s) | 44, 47, 78, 81, 150, 203 |
| FspBI | CTAG | 1 cut(s) | 215 |
| GluI | GCNGC | 6 cut(s) | 44, 47, 78, 81, 150, 203 |
| GsaI | CCCAGC | 2 cut(s) | 41, 57 |
| GsuI | CTGGAG | 1 cut(s) | 177 |
| HaeIII | GGCC | 1 cut(s) | 158 |
| Hin1II | CATG | 3 cut(s) | 72, 122, 209 |
| HincII | GTYRAC | 1 cut(s) | 8 |
| HindII | GTYRAC | 1 cut(s) | 8 |
| HinfI | GANTC | 1 cut(s) | 4 |
| HphI | GGTGA | 2 cut(s) | 116, 326 |
| Hpy166II | GTNNAC | 2 cut(s) | 8, 239 |
| Hpy188I | TCNGA | 4 cut(s) | 100, 170, 181, 364 |
| Hpy188III | TCNNGA | 2 cut(s) | 194, 344 |
| Hpy8I | GTNNAC | 2 cut(s) | 8, 239 |
| HpyCH4III | ACNGT | 1 cut(s) | 326 |
| HpyCH4V | TGCA | 3 cut(s) | 83, 205, 321 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 21, 43, 55, 64, 146, 155 |
| Hsp92II | CATG | 3 cut(s) | 72, 122, 209 |
| Ksp22I | TGATCA | 1 cut(s) | 165 |
| Kzo9I | GATC | 2 cut(s) | 165, 176 |
| LmnI | GCTCC | 2 cut(s) | 199, 227 |
| LpnPI | CCDG | 9 cut(s) | 6, 23, 39, 63, 69, 105, 207, 317, 344 |
| Lsp1109I | GCAGC | 5 cut(s) | 30, 33, 67, 136, 189 |
| LweI | GCATC | 1 cut(s) | 172 |
| MaeI | CTAG | 1 cut(s) | 215 |
| MaeIII | GTNAC | 2 cut(s) | 187, 326 |
| MalI | GATC | 2 cut(s) | 167, 178 |
| MboI | GATC | 2 cut(s) | 165, 176 |
| MhlI | GDGCHC | 1 cut(s) | 175 |
| MlsI | TGGCCA | 1 cut(s) | 158 |
| MluNI | TGGCCA | 1 cut(s) | 158 |
| MlyI | GAGTC | 1 cut(s) | 13 |
| MnlI | CCTC | 1 cut(s) | 190 |
| Mox20I | TGGCCA | 1 cut(s) | 158 |
| MscI | TGGCCA | 1 cut(s) | 158 |
| MseI | TTAA | 4 cut(s) | 114, 126, 264, 373 |
| MslI | CAYNNNNRTG | 1 cut(s) | 67 |
| Msp20I | TGGCCA | 1 cut(s) | 158 |
| MspA1I | CMGCKG | 1 cut(s) | 140 |
| MspR9I | CCNGG | 1 cut(s) | 332 |
| MvaI | CCWGG | 1 cut(s) | 332 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 21, 43, 55, 64, 146, 155 |
| NcoI | CCATGG | 1 cut(s) | 68 |
| NdeII | GATC | 2 cut(s) | 165, 176 |
| NlaIII | CATG | 3 cut(s) | 72, 122, 209 |
| NspI | RCATGY | 1 cut(s) | 122 |
| PkrI | GCNGC | 6 cut(s) | 45, 48, 79, 82, 151, 204 |
| PleI | GAGTC | 1 cut(s) | 12 |
| PpsI | GAGTC | 1 cut(s) | 12 |
| Psp124BI | GAGCTC | 1 cut(s) | 175 |
| Psp6I | CCWGG | 1 cut(s) | 330 |
| PspEI | GGTNACC | 1 cut(s) | 326 |
| PspFI | CCCAGC | 2 cut(s) | 37, 53 |
| PspGI | CCWGG | 1 cut(s) | 330 |
| PstI | CTGCAG | 1 cut(s) | 85 |
| RseI | CAYNNNNRTG | 1 cut(s) | 67 |
| SacI | GAGCTC | 1 cut(s) | 175 |
| SaqAI | TTAA | 4 cut(s) | 114, 126, 264, 373 |
| SatI | GCNGC | 6 cut(s) | 44, 47, 78, 81, 150, 203 |
| Sau3AI | GATC | 2 cut(s) | 165, 176 |
| SchI | GAGTC | 1 cut(s) | 13 |
| ScrFI | CCNGG | 1 cut(s) | 332 |
| SduI | GDGCHC | 1 cut(s) | 175 |
| SetI | ASST | 4 cut(s) | 39, 88, 175, 204 |
| SfaNI | GCATC | 1 cut(s) | 172 |
| SfcI | CTRYAG | 1 cut(s) | 81 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 67 |
| SpeI | ACTAGT | 1 cut(s) | 214 |
| SsiI | CCGC | 2 cut(s) | 77, 138 |
| SspMI | CTAG | 1 cut(s) | 215 |
| SstI | GAGCTC | 1 cut(s) | 175 |
| StyD4I | CCNGG | 1 cut(s) | 330 |
| StyI | CCWWGG | 2 cut(s) | 68, 153 |
| TaaI | ACNGT | 1 cut(s) | 326 |
| TaqI | TCGA | 1 cut(s) | 175 |
| TauI | GCSGC | 1 cut(s) | 80 |
| Tru1I | TTAA | 4 cut(s) | 114, 126, 264, 373 |
| Tru9I | TTAA | 4 cut(s) | 114, 126, 264, 373 |
| TscAI | CASTG | 1 cut(s) | 69 |
| TseI | GCWGC | 5 cut(s) | 43, 46, 80, 149, 202 |
| TspRI | CASTG | 1 cut(s) | 69 |
| XceI | RCATGY | 1 cut(s) | 122 |
| XspI | CTAG | 1 cut(s) | 215 |