Rw2G030240

lipid metabolic process

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000034
Physical Location & Seq
Forward (+)
49469155 .. 49471135
1981 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G030240.1

Sequence Viewer

Length: 1206 bp
ATGGCTTCCTCCTCTTCCAACCCTCCTTCCCAAAACACTTCCCAATTTACCAAACTCACCCAATCCAACTATCTTGTCTGGCTTCGTCAGCTCAAGCCCTATCTTCATGGTGCCAAGCTTTGGGGTTATGTTGATGGATCAATTCCTCAACCCTCTCCCACCACCACCAAAGAAGGCAGCCCTGCCAAAACCATTCCCAATCCCGAGTATGAAGCTTGGTTTACCACTGACCAACAGATTGTCAGCATCCTCACCACTTCACTGACTGAAAATGTGGCTCGTCTAACCATTGGGTTTGATACTTCCCAGGCCATTTGGGATTGCCTCGCCCGCCACTTCTCTCAACGCTCTGTTGCCAGCGCCACAAGCCTCAAGCTCCAGCTCTTTGACCTTCAAAAGGGTTCGCAATCTGTTGATACATATCTGCAGCAGGCCAAATCCATTGCCGACTCCTTGGCCTCAATCAACCAGCCTATCTCCGATGCCGACTTGGTTGTTGCTACACTCCATGGGCTTGGTCCTGATTATCTCATGCTCCGTACTGTTCTTGCCCAGTCTCCATCCCTACCTGATTTCTCTGATCTCCGTGCTCAGATCCTTGCCTTTGATGCGCAACAACAGCCCGACCCTTCTGACCCGGCCACTGCCCTGCTCAATCAAGGTCCGATCCAAGCACAGCAGCCTTGCCGCCGTGACAATCGCAGTCGGCCTCCCCAATTTGGTGGTCGCCCCTTTGGGAACTATCGGTATAAGTGTGGTGGTTCACGACCCCAATTTGTTCCTTCCCAACATGTGTTATCTCCAAACACCCAGCAGCATGGCACACCTCAGTATGCGTCCTTTCCTTTTCCTCCCCCAAATCGGGCTGCCCGCTCCCCTTGGGCCACTGGGCTTCTTGGTCCAAGCCCACATTGGTGTCCTAATTGTCACACAGATCAACATGGGCTTCCTCAATGTCCTCACCGTTTCTCAGGCCCCTCTTCAGCACCTCCGTTTGCTGGCTTCCATTCCCTTGGTGATCTGAATTGGTATCCCGATACCGGAGCTACCCACCACATGACAGCCATGCCCCTAAACAACTCTCAGACTTATGGTGGCCCGCACAATGTTTATATGGGTAACGGCAATTCCATGCCCGTTACTCATACTGGTAACCTCCTTTTATCATTGGGCAAATTTCCCTTCTCCTTAGAACATCCGCTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4219 RVT_2 Retrotran_gag_2 Retrotran_gag_3 gag_pre-integrs rve zf-CCHC

Protein Analysis

401

Amino Acids

43.83

Weight (kDa)

8.19

Isoelectric Point (pI)

54.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 34 - 206 2.9e-19 gag-polypeptide of LTR copia-type
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000034)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34070
fragaria_vesca FvH4_1g00961 FvH4_1g10351 FvH4_1g15351 FvH4_1g26571 FvH4_1g26621 FvH4_1g28434 FvH4_2g00591 FvH4_2g06411 FvH4_2g16831 FvH4_2g20161 FvH4_2g23291 FvH4_3g04191 FvH4_3g07021 FvH4_3g17162 FvH4_3g17262 FvH4_3g38081 FvH4_3g39581 FvH4_3g45090 FvH4_4g05782 FvH4_4g05872 FvH4_4g13041 FvH4_4g23411 FvH4_4g24051 FvH4_4g26452 FvH4_4g26453 FvH4_4g27903 FvH4_4g33449 FvH4_5g01072 FvH4_5g03532 FvH4_5g04140 FvH4_5g06631 FvH4_5g09401 FvH4_5g09403 FvH4_5g20624 FvH4_5g20701 FvH4_5g21971 FvH4_5g36481 FvH4_5g38691 FvH4_6g11492 FvH4_6g19792 FvH4_6g20601 FvH4_6g24641 FvH4_6g34291 FvH4_6g36662 FvH4_6g36681 FvH4_6g36682 FvH4_6g36682 FvH4_6g36682 FvH4_6g36770 FvH4_6g36981 FvH4_6g37021 FvH4_6g37022 FvH4_6g43610 FvH4_7g10872 FvH4_7g10872 FvH4_7g16100 FvH4_7g19191 FvH4_7g23761 FvH4_7g24921
malus_domestica MD01G1077600.v1.1 MD02G1010600.v1.1 MD03G1059500.v1.1 MD04G1024600.v1.1 MD04G1101800.v1.1 MD04G1151700.v1.1 MD05G1025000.v1.1 MD05G1129300.v1.1 MD05G1320000.v1.1 MD06G1136100.v1.1 MD08G1157400.v1.1 MD09G1041800.v1.1 MD10G1109600.v1.1 MD10G1255600.v1.1 MD11G1108900.v1.1 MD11G1145100.v1.1 MD11G1242500.v1.1 MD12G1113300.v1.1 MD12G1231800.v1.1 MD13G1099200.v1.1 MD13G1142500.v1.1 MD15G1114200.v1.1 MD15G1119400.v1.1 MD15G1372100.v1.1 MD16G1038200.v1.1 MD16G1163700.v1.1 MD17G1055600.v1.1 MD17G1089000.v1.1 MD17G1109500.v1.1
prunus_persica Prupe.1G091500_v2.0.a1 Prupe.1G170400_v2.0.a1 Prupe.2G074700_v2.0.a1 Prupe.3G024500_v2.0.a1 Prupe.3G026300_v2.0.a1 Prupe.3G245500_v2.0.a1 Prupe.4G199600_v2.0.a1 Prupe.4G230800_v2.0.a1 Prupe.4G238700_v2.0.a1 Prupe.6G052200_v2.0.a1 Prupe.8G080900_v2.0.a1 Prupe.8G084200_v2.0.a1 Prupe.8G185000_v2.0.a1 Prupe.8G185100_v2.0.a1
pyrus_communis pycom01g07890 pycom01g09690 pycom01g14780 pycom01g18640 pycom03g07210 pycom05g03010 pycom05g11250 pycom05g23340 pycom05g27720 pycom06g05610 pycom06g12180 pycom09g06110 pycom09g08430 pycom10g16550 pycom11g03760 pycom11g24270 pycom12g12290 pycom13g10850 pycom13g18230 pycom13g22260 pycom13g27850 pycom14g17700 pycom15g07910 pycom15g26210 pycom15g26440 pycom15g29540 pycom16g00280 pycom16g18160 pycom17g16360 pycom17g19900
rosa_chinensis RchiOBHm_Chr1g0313671 RchiOBHm_Chr1g0322301 RchiOBHm_Chr1g0334441 RchiOBHm_Chr1g0337651 RchiOBHm_Chr1g0337711 RchiOBHm_Chr1g0339131 RchiOBHm_Chr1g0344491 RchiOBHm_Chr1g0347771 RchiOBHm_Chr1g0349331 RchiOBHm_Chr1g0354241 RchiOBHm_Chr1g0355351 RchiOBHm_Chr1g0376111 RchiOBHm_Chr1g0379881 RchiOBHm_Chr1g0384421 RchiOBHm_Chr2g0101531 RchiOBHm_Chr2g0117741 RchiOBHm_Chr2g0126581 RchiOBHm_Chr2g0129181 RchiOBHm_Chr2g0136201 RchiOBHm_Chr2g0137991 RchiOBHm_Chr2g0156571 RchiOBHm_Chr2g0159441 RchiOBHm_Chr2g0164131 RchiOBHm_Chr2g0174291 RchiOBHm_Chr2g0175161 RchiOBHm_Chr3g0448481 RchiOBHm_Chr3g0450851 RchiOBHm_Chr3g0450861 RchiOBHm_Chr3g0461251 RchiOBHm_Chr3g0463031 RchiOBHm_Chr3g0465981 RchiOBHm_Chr3g0472811 RchiOBHm_Chr3g0472821 RchiOBHm_Chr3g0480521 RchiOBHm_Chr3g0480531 RchiOBHm_Chr3g0482021 RchiOBHm_Chr3g0496771 RchiOBHm_Chr4g0393151 RchiOBHm_Chr4g0407171 RchiOBHm_Chr4g0431731 RchiOBHm_Chr4g0432071 RchiOBHm_Chr4g0436951 RchiOBHm_Chr5g0000711 RchiOBHm_Chr5g0004361 RchiOBHm_Chr5g0012631 RchiOBHm_Chr5g0025271 RchiOBHm_Chr5g0032551 RchiOBHm_Chr5g0038991 RchiOBHm_Chr5g0043811 RchiOBHm_Chr5g0058511 RchiOBHm_Chr5g0077241 RchiOBHm_Chr5g0079981 RchiOBHm_Chr5g0083071 RchiOBHm_Chr6g0256871 RchiOBHm_Chr6g0266721 RchiOBHm_Chr6g0299971 RchiOBHm_Chr6g0304931 RchiOBHm_Chr7g0177331 RchiOBHm_Chr7g0182851 RchiOBHm_Chr7g0190501 RchiOBHm_Chr7g0200091 RchiOBHm_Chr7g0203981 RchiOBHm_Chr7g0206011 RchiOBHm_Chr7g0206111 RchiOBHm_Chr7g0206441 RchiOBHm_Chr7g0220151 RchiOBHm_Chr7g0234441 RchiOBHm_Chr7g0234661 RchiOBHm_Chr7g0238281
rosa_laevigata RLG00000003338 RLG00000020373 RLG00000020377 RLG00000020415 RLG00000020416 RLG00000026600
rosa_multiflora Rmu_co8214922.1_g000001 Rmu_co8257903.1_g000001 Rmu_co8295123.1_g000001 Rmu_sc0000177.1_g000007 Rmu_sc0000614.1_g000005 Rmu_sc0000648.1_g000003 Rmu_sc0000809.1_g000004 Rmu_sc0001044.1_g000022 Rmu_sc0001211.1_g000100 Rmu_sc0001306.1_g000013 Rmu_sc0001493.1_g000053 Rmu_sc0001605.1_g000001 Rmu_sc0001706.1_g000033 Rmu_sc0001966.1_g000037 Rmu_sc0002080.1_g000051 Rmu_sc0002244.1_g000027 Rmu_sc0002669.1_g000045 Rmu_sc0002806.1_g000013 Rmu_sc0003012.1_g000028 Rmu_sc0003074.1_g000019 Rmu_sc0003180.1_g000020 Rmu_sc0003229.1_g000006 Rmu_sc0003229.1_g000015 Rmu_sc0003267.1_g000017 Rmu_sc0003387.1_g000008 Rmu_sc0004109.1_g000011 Rmu_sc0004483.1_g000021 Rmu_sc0004729.1_g000018 Rmu_sc0005124.1_g000007 Rmu_sc0006187.1_g000007 Rmu_sc0006311.1_g000005 Rmu_sc0006323.1_g000009 Rmu_sc0006619.1_g000003 Rmu_sc0006619.1_g000004 Rmu_sc0007216.1_g000004 Rmu_sc0012033.1_g000003 Rmu_sc0012414.1_g000003 Rmu_sc0013716.1_g000004 Rmu_sc0017020.1_g000002 Rmu_sc0017650.1_g000008 Rmu_sc0022997.1_g000002 Rmu_sc0026059.1_g000001 Rmu_sc0034277.1_g000001 Rmu_sc0038462.1_g000001 Rmu_ssc0000134.1_g000019 Rmu_ssc0000326.1_g000010 Rmu_ssc0000337.1_g000002
rosa_roxburghii Rroxscaffold_153G00436580 Rroxscaffold_1G00005540 Rroxscaffold_1G00007910 Rroxscaffold_1G00020780 Rroxscaffold_1G00024800 Rroxscaffold_1G00028530 Rroxscaffold_1G00035960 Rroxscaffold_1G00060770 Rroxscaffold_1G00063880 Rroxscaffold_1G00072730 Rroxscaffold_2G00090480 Rroxscaffold_2G00098360 Rroxscaffold_2G00098380 Rroxscaffold_2G00098390 Rroxscaffold_2G00098410 Rroxscaffold_2G00098420 Rroxscaffold_2G00099480 Rroxscaffold_2G00122440 Rroxscaffold_2G00130690 Rroxscaffold_2G00132840 Rroxscaffold_3G00259940 Rroxscaffold_3G00262860 Rroxscaffold_3G00262870 Rroxscaffold_3G00262880 Rroxscaffold_3G00262890 Rroxscaffold_4G00296680 Rroxscaffold_4G00315340 Rroxscaffold_5G00341760 Rroxscaffold_5G00350520 Rroxscaffold_5G00365550 Rroxscaffold_5G00367740 Rroxscaffold_5G00375090 Rroxscaffold_5G00377290 Rroxscaffold_6G00400710 Rroxscaffold_6G00402880 Rroxscaffold_6G00418980 Rroxscaffold_6G00419370 Rroxscaffold_6G00430760 Rroxscaffold_7G00161960 Rroxscaffold_7G00166140 Rroxscaffold_7G00175330 Rroxscaffold_7G00206820 Rroxscaffold_7G00212670
rosa_rugosa Rorug01G0429300 Rorug01G0429400 Rorug02G0276300 Rorug02G0362300 Rorug02G0412000 Rorug04G0283500.1 Rorug05G0121800 Rorug05G0138500 Rorug05G0138600 Rorug05G0221000 Rorug05G0556000 Rorug07G0094400 Rorug07G0119200
rosa_samantha Rh1AG022500 Rh1AG214800 Rh1AG295500 Rh1DG290300 Rh2AG469300 Rh2AG469600 Rh2AG469800 Rh2AG470000 Rh2AG472200 Rh2AG472300 Rh2AG472400 Rh2BG358100 Rh2BG456100 Rh2BG481900 Rh2BG482100 Rh2BG482300 Rh2BG482400 Rh2BG484300 Rh2BG484400 Rh2CG255600 Rh2CG455400 Rh2CG455500 Rh2CG455600 Rh2CG455900 Rh2CG456100 Rh2CG458100 Rh2CG458200 Rh2CG458300 Rh2DG466000 Rh2DG490700 Rh2DG490900 Rh2DG491100 Rh2DG491200 Rh2DG493500 Rh2DG493600 Rh4AG091000 Rh4BG347200 Rh4CG082200 Rh4CG099300 Rh5AG230100 Rh5AG230300 Rh5AG302500 Rh5AG302600 Rh5BG214100 Rh5BG231000 Rh5BG231100 Rh5BG310700 Rh5BG543300 Rh5CG238000 Rh5CG259000 Rh5CG259100 Rh5CG566500 Rh5DG027500 Rh5DG218700 Rh5DG236100 Rh5DG236300 Rh6AG285400 Rh6BG286900 Rh6BG376000 Rh6DG235600 Rh6DG280900 Rh6DG368700 Rh6DG423800 Rh7AG106800 Rh7AG226500 Rh7AG227900 Rh7AG228000 Rh7AG229300 Rh7BG097000 Rh7BG121300 Rh7BG129300 Rh7BG130100 Rh7BG222700 Rh7BG225700 Rh7BG225800 Rh7CG111500 Rh7CG131300 Rh7CG131600 Rh7CG131700 Rh7CG132100 Rh7CG132400 Rh7CG132500 Rh7CG132700 Rh7CG132900 Rh7CG221800 Rh7CG242400 Rh7CG242500 Rh7CG243800 Rh7CG244000 Rh7CG365700 Rh7DG109900 Rh7DG110000 Rh7DG129000 Rh7DG130400 Rh7DG236200 Rh7DG236300
rosa_wichuraiana Rw0G001140 Rw0G001660 Rw0G003710 Rw0G003800 Rw0G005640 Rw0G009930 Rw1G005610 Rw1G011690 Rw1G018880 Rw1G026950 Rw1G029360 Rw1G032170 Rw1G035710 Rw2G023950 Rw2G030240 Rw2G038210 Rw2G038490 Rw2G038500 Rw2G054270 Rw3G009830 Rw4G005830 Rw4G006210 Rw4G006690 Rw4G014470 Rw4G015560 Rw4G021550 Rw4G033420 Rw4G034150 Rw5G000890 Rw5G002510 Rw5G002580 Rw5G003440 Rw5G009960 Rw5G024480 Rw5G032910 Rw5G032990 Rw5G035340 Rw5G042620 Rw6G004790 Rw6G012300 Rw6G017050 Rw6G019300 Rw6G026800 Rw6G027320 Rw6G039180 Rw7G010750 Rw7G010920 Rw7G014890 Rw7G016540 Rw7G019730 Rw7G022510 Rw7G023070 Rw7G038740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 612
AccB1I GGYRCC 1 cut(s) 110
AccB7I CCANNNNNTGG 1 cut(s) 120
AccBSI CCGCTC 1 cut(s) 873
AciI CCGC 5 cut(s) 331, 688, 871, 1100, 1199
AclWI GGATC 3 cut(s) 145, 589, 661
AcoI YGGCCR 1 cut(s) 639
AcsI RAATTY 1 cut(s) 1175
AcuI CTGAAG 1 cut(s) 966
AfaI GTAC 1 cut(s) 541
AfiI CCNNNNNNNGG 7 cut(s) 120, 397, 719, 861, 862, 998, 1040
AflIII ACRYGT 1 cut(s) 790
AgsI TTSAA 1 cut(s) 395
AjnI CCWGG 1 cut(s) 306
AleI CACNNNNGTG 1 cut(s) 913
AluBI AGCT 6 cut(s) 91, 118, 215, 376, 382, 1046
AluI AGCT 6 cut(s) 91, 118, 215, 376, 382, 1046
Alw21I GWGCWC 1 cut(s) 592
Alw26I GTCTC 1 cut(s) 561
AlwI GGATC 3 cut(s) 145, 589, 661
Ama87I CYCGRG 1 cut(s) 203
AoxI GGCC 8 cut(s) 309, 432, 456, 639, 707, 882, 973, 1096
ApeKI GCWGC 5 cut(s) 177, 427, 679, 814, 866
ApoI RAATTY 1 cut(s) 1175
AspLEI GCGC 2 cut(s) 362, 613
AspS9I GGNCC 6 cut(s) 518, 662, 882, 899, 974, 1097
AsuC2I CCSGG 1 cut(s) 638
AsuHPI GGTGA 4 cut(s) 49, 244, 953, 1028
AvaI CYCGRG 1 cut(s) 203
AvaII GGWCC 3 cut(s) 518, 662, 899
BanI GGYRCC 1 cut(s) 110
Bbv12I GWGCWC 1 cut(s) 592
BbvI GCAGC 5 cut(s) 189, 439, 691, 826, 853
BccI CCATC 2 cut(s) 128, 568
BceAI ACGGC 2 cut(s) 675, 1138
BciT130I CCWGG 1 cut(s) 308
BciVI GTATCC 1 cut(s) 1041
BcnI CCSGG 1 cut(s) 638
BcoDI GTCTC 1 cut(s) 561
BfmI CTRYAG 1 cut(s) 425
BfoI RGCGCY 1 cut(s) 363
BfuI GTATCC 1 cut(s) 1041
BisI GCNGC 6 cut(s) 178, 428, 680, 688, 815, 867
BlsI GCNGC 6 cut(s) 179, 429, 681, 689, 816, 868
Bme1390I CCNGG 2 cut(s) 308, 638
Bme18I GGWCC 3 cut(s) 518, 662, 899
BmeT110I CYCGRG 1 cut(s) 203
BmgT120I GGNCC 6 cut(s) 518, 662, 882, 899, 974, 1097
BmiI GGNNCC 2 cut(s) 112, 976
BmrFI CCNGG 2 cut(s) 308, 638
BmrI ACTGGG 2 cut(s) 547, 897
BmsI GCATC 3 cut(s) 255, 472, 598
BmuI ACTGGG 2 cut(s) 547, 897
BpmI CTGGAG 1 cut(s) 362
BpuEI CTTGAG 2 cut(s) 77, 356
BpuMI CCSGG 1 cut(s) 638
BsaBI GATNNNNATC 1 cut(s) 420
BsaJI CCNNGG 5 cut(s) 306, 453, 508, 878, 1012
BsaWI WCCGGW 1 cut(s) 1040
Bsc4I CCNNNNNNNGG 7 cut(s) 120, 397, 719, 861, 862, 998, 1040
Bse1I ACTGG 3 cut(s) 553, 892, 1153
Bse3DI GCAATG 1 cut(s) 441
Bse8I GATNNNNATC 1 cut(s) 420
BseBI CCWGG 1 cut(s) 308
BseDI CCNNGG 5 cut(s) 306, 453, 508, 878, 1012
BseGI GGATG 3 cut(s) 246, 560, 1195
BseJI GATNNNNATC 1 cut(s) 420
BseLI CCNNNNNNNGG 7 cut(s) 120, 397, 719, 861, 862, 998, 1040
BseMI GCAATG 1 cut(s) 441
BseMII CTCAG 4 cut(s) 605, 842, 984, 1097
BseNI ACTGG 3 cut(s) 553, 892, 1153
BseXI GCAGC 5 cut(s) 189, 439, 691, 826, 853
BseYI CCCAGC 1 cut(s) 810
BshFI GGCC 8 cut(s) 311, 434, 458, 641, 709, 884, 975, 1098
BshNI GGYRCC 1 cut(s) 110
BsiHKAI GWGCWC 1 cut(s) 592
BsiHKCI CYCGRG 1 cut(s) 203
BsiSI CCGG 2 cut(s) 638, 1041
BslI CCNNNNNNNGG 7 cut(s) 120, 397, 719, 861, 862, 998, 1040
BsmAI GTCTC 1 cut(s) 561
BsnI GGCC 8 cut(s) 311, 434, 458, 641, 709, 884, 975, 1098
BsoBI CYCGRG 1 cut(s) 203
Bsp1286I GDGCHC 1 cut(s) 592
Bsp143I GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
Bsp19I CCATGG 1 cut(s) 508
BspACI CCGC 5 cut(s) 331, 688, 871, 1100, 1199
BspANI GGCC 8 cut(s) 311, 434, 458, 641, 709, 884, 975, 1098
BspCNI CTCAG 4 cut(s) 604, 841, 983, 1096
BspLI GGNNCC 2 cut(s) 112, 976
BspMAI CTGCAG 1 cut(s) 429
BspPI GGATC 3 cut(s) 145, 589, 661
BspT107I GGYRCC 1 cut(s) 110
BsrBI CCGCTC 1 cut(s) 873
BsrDI GCAATG 1 cut(s) 441
BsrI ACTGG 3 cut(s) 553, 892, 1153
BssECI CCNNGG 5 cut(s) 306, 453, 508, 878, 1012
BssMI GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
BssT1I CCWWGG 4 cut(s) 453, 508, 878, 1012
Bst2UI CCWGG 1 cut(s) 308
Bst4CI ACNGT 2 cut(s) 544, 965
Bst6I CTCTTC 2 cut(s) 19, 985
BstC8I GCNNGC 6 cut(s) 331, 358, 432, 871, 1000, 1100
BstDEI CTNAG 5 cut(s) 591, 828, 970, 1083, 1189
BstDSI CCRYGG 1 cut(s) 508
BstEII GGTNACC 1 cut(s) 1151
BstENI CCTNNNNNAGG 1 cut(s) 395
BstF5I GGATG 3 cut(s) 246, 560, 1195
BstH2I RGCGCY 1 cut(s) 363
BstHHI GCGC 2 cut(s) 362, 613
BstKTI GATC 6 cut(s) 140, 583, 597, 669, 937, 1021
BstMAI GTCTC 1 cut(s) 561
BstMBI GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
BstMWI GCNNNNNNNGC 5 cut(s) 88, 330, 366, 608, 619
BstNI CCWGG 1 cut(s) 308
BstNSI RCATGY 1 cut(s) 794
BstPI GGTNACC 1 cut(s) 1151
BstSCI CCNGG 2 cut(s) 306, 636
BstSFI CTRYAG 1 cut(s) 425
BstV1I GCAGC 5 cut(s) 189, 439, 691, 826, 853
BstX2I RGATCY 1 cut(s) 594
BstXI CCANNNNNNTGG 4 cut(s) 515, 722, 818, 1013
BstYI RGATCY 1 cut(s) 594
BsuI GTATCC 1 cut(s) 1041
BsuRI GGCC 8 cut(s) 311, 434, 458, 641, 709, 884, 975, 1098
BtgI CCRYGG 1 cut(s) 508
BtsCI GGATG 3 cut(s) 246, 560, 1195
BtsI GCAGTG 1 cut(s) 642
BtsIMutI CAGTG 4 cut(s) 225, 260, 642, 885
Cac8I GCNNGC 6 cut(s) 331, 358, 432, 871, 1000, 1100
CfoI GCGC 2 cut(s) 362, 613
Cfr13I GGNCC 6 cut(s) 518, 662, 882, 899, 974, 1097
CseI GACGC 1 cut(s) 825
Csp6I GTAC 1 cut(s) 540
CviAII CATG 9 cut(s) 107, 509, 532, 791, 818, 941, 1057, 1066, 1132
CviQI GTAC 1 cut(s) 540
DdeI CTNAG 5 cut(s) 591, 828, 970, 1083, 1189
DpnI GATC 6 cut(s) 139, 582, 596, 668, 936, 1020
DpnII GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
EaeI YGGCCR 1 cut(s) 639
Eam1104I CTCTTC 2 cut(s) 19, 985
EarI CTCTTC 2 cut(s) 19, 985
Eco130I CCWWGG 4 cut(s) 453, 508, 878, 1012
Eco47I GGWCC 3 cut(s) 518, 662, 899
Eco57I CTGAAG 1 cut(s) 966
Eco88I CYCGRG 1 cut(s) 203
Eco91I GGTNACC 1 cut(s) 1151
EcoNI CCTNNNNNAGG 1 cut(s) 395
EcoO109I RGGNCCY 1 cut(s) 974
EcoO65I GGTNACC 1 cut(s) 1151
EcoRII CCWGG 1 cut(s) 306
EcoT14I CCWWGG 4 cut(s) 453, 508, 878, 1012
ErhI CCWWGG 4 cut(s) 453, 508, 878, 1012
FaeI CATG 9 cut(s) 110, 512, 535, 794, 821, 944, 1060, 1069, 1135
FatI CATG 9 cut(s) 106, 508, 531, 790, 817, 940, 1056, 1065, 1131
FauI CCCGC 3 cut(s) 338, 878, 1107
Fnu4HI GCNGC 6 cut(s) 178, 428, 680, 688, 815, 867
FokI GGATG 3 cut(s) 233, 547, 1182
Fsp4HI GCNGC 6 cut(s) 178, 428, 680, 688, 815, 867
FspI TGCGCA 1 cut(s) 612
GlaI GCGC 2 cut(s) 361, 612
GluI GCNGC 6 cut(s) 178, 428, 680, 688, 815, 867
GsaI CCCAGC 1 cut(s) 814
GsuI CTGGAG 1 cut(s) 362
HaeII RGCGCY 1 cut(s) 363
HaeIII GGCC 8 cut(s) 311, 434, 458, 641, 709, 884, 975, 1098
HapII CCGG 2 cut(s) 638, 1041
HgaI GACGC 1 cut(s) 825
HhaI GCGC 2 cut(s) 362, 613
Hin1II CATG 9 cut(s) 110, 512, 535, 794, 821, 944, 1060, 1069, 1135
Hin6I GCGC 2 cut(s) 360, 611
HinP1I GCGC 2 cut(s) 360, 611
HindIII AAGCTT 2 cut(s) 116, 213
HinfI GANTC 1 cut(s) 449
HpaII CCGG 2 cut(s) 638, 1041
HphI GGTGA 4 cut(s) 49, 244, 953, 1028
Hpy166II GTNNAC 2 cut(s) 222, 764
Hpy188I TCNGA 7 cut(s) 481, 580, 594, 634, 666, 1023, 1086
Hpy188III TCNNGA 4 cut(s) 203, 521, 765, 1034
Hpy8I GTNNAC 2 cut(s) 222, 764
HpyAV CCTTC 6 cut(s) 36, 167, 401, 639, 792, 1192
HpyCH4III ACNGT 2 cut(s) 544, 965
HpyCH4V TGCA 1 cut(s) 427
HpyF10VI GCNNNNNNNGC 5 cut(s) 88, 330, 366, 608, 619
HpyF3I CTNAG 5 cut(s) 591, 828, 970, 1083, 1189
Hsp92II CATG 9 cut(s) 110, 512, 535, 794, 821, 944, 1060, 1069, 1135
HspAI GCGC 2 cut(s) 360, 611
Kzo9I GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
LmnI GCTCC 4 cut(s) 381, 540, 878, 1043
Lsp1109I GCAGC 5 cut(s) 189, 439, 691, 826, 853
LweI GCATC 3 cut(s) 255, 472, 598
MaeIII GTNAC 5 cut(s) 692, 926, 1118, 1138, 1151
MalI GATC 6 cut(s) 139, 582, 596, 668, 936, 1020
MbiI CCGCTC 1 cut(s) 873
MboI GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
MboII GAAGA 3 cut(s) 6, 95, 972
MflI RGATCY 1 cut(s) 594
MhlI GDGCHC 1 cut(s) 592
MluCI AATT 8 cut(s) 44, 141, 716, 773, 922, 1024, 1126, 1175
MlyI GAGTC 1 cut(s) 443
MmeI TCCRAC 2 cut(s) 42, 90
MslI CAYNNNNRTG 1 cut(s) 913
MspI CCGG 2 cut(s) 638, 1041
MspR9I CCNGG 2 cut(s) 308, 638
MvaI CCWGG 1 cut(s) 308
MwoI GCNNNNNNNGC 5 cut(s) 88, 330, 366, 608, 619
NciI CCSGG 1 cut(s) 638
NcoI CCATGG 1 cut(s) 508
NdeII GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
NlaIII CATG 9 cut(s) 110, 512, 535, 794, 821, 944, 1060, 1069, 1135
NlaIV GGNNCC 2 cut(s) 112, 976
NmuCI GTSAC 2 cut(s) 692, 926
NsbI TGCGCA 1 cut(s) 612
NspI RCATGY 1 cut(s) 794
OliI CACNNNNGTG 1 cut(s) 913
PciI ACATGT 1 cut(s) 790
PflMI CCANNNNNTGG 1 cut(s) 120
PkrI GCNGC 6 cut(s) 179, 429, 681, 689, 816, 868
PleI GAGTC 1 cut(s) 443
PpsI GAGTC 1 cut(s) 443
PscI ACATGT 1 cut(s) 790
Psp6I CCWGG 1 cut(s) 306
PspEI GGTNACC 1 cut(s) 1151
PspFI CCCAGC 1 cut(s) 810
PspGI CCWGG 1 cut(s) 306
PspN4I GGNNCC 2 cut(s) 112, 976
PspPI GGNCC 6 cut(s) 518, 662, 882, 899, 974, 1097
PstI CTGCAG 1 cut(s) 429
PsuI RGATCY 1 cut(s) 594
RsaI GTAC 1 cut(s) 541
RsaNI GTAC 1 cut(s) 540
RseI CAYNNNNRTG 1 cut(s) 913
SatI GCNGC 6 cut(s) 178, 428, 680, 688, 815, 867
Sau3AI GATC 6 cut(s) 137, 580, 594, 666, 934, 1018
Sau96I GGNCC 6 cut(s) 518, 662, 882, 899, 974, 1097
SchI GAGTC 1 cut(s) 443
ScrFI CCNGG 2 cut(s) 308, 638
SduI GDGCHC 1 cut(s) 592
SfaNI GCATC 3 cut(s) 255, 472, 598
SfcI CTRYAG 1 cut(s) 425
SinI GGWCC 3 cut(s) 518, 662, 899
SmiMI CAYNNNNRTG 1 cut(s) 913
SmlI CTYRAG 2 cut(s) 92, 371
SmoI CTYRAG 2 cut(s) 92, 371
Sse9I AATT 8 cut(s) 44, 141, 716, 773, 922, 1024, 1126, 1175
SsiI CCGC 5 cut(s) 331, 688, 871, 1100, 1199
StyD4I CCNGG 2 cut(s) 306, 636
StyI CCWWGG 4 cut(s) 453, 508, 878, 1012
TaaI ACNGT 2 cut(s) 544, 965
TasI AATT 8 cut(s) 44, 141, 716, 773, 922, 1024, 1126, 1175
TauI GCSGC 1 cut(s) 690
TscAI CASTG 4 cut(s) 232, 267, 649, 892
TseFI GTSAC 2 cut(s) 692, 926
TseI GCWGC 5 cut(s) 177, 427, 679, 814, 866
Tsp45I GTSAC 2 cut(s) 692, 926
TspDTI ATGAA 2 cut(s) 95, 225
TspGWI ACGGA 3 cut(s) 527, 575, 981
TspRI CASTG 4 cut(s) 232, 267, 649, 892
Van91I CCANNNNNTGG 1 cut(s) 120
VpaK11BI GGWCC 3 cut(s) 518, 662, 899
XagI CCTNNNNNAGG 1 cut(s) 395
XapI RAATTY 1 cut(s) 1175
XceI RCATGY 1 cut(s) 794
XcmI CCANNNNNNNNNTGG 1 cut(s) 909
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.