gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 177 |
| AccII | CGCG | 1 cut(s) | 258 |
| AccIII | TCCGGA | 1 cut(s) | 232 |
| AclWI | GGATC | 1 cut(s) | 287 |
| AcuI | CTGAAG | 1 cut(s) | 170 |
| AluBI | AGCT | 1 cut(s) | 100 |
| AluI | AGCT | 1 cut(s) | 100 |
| AlwI | GGATC | 1 cut(s) | 287 |
| Aor13HI | TCCGGA | 1 cut(s) | 232 |
| ApeKI | GCWGC | 1 cut(s) | 361 |
| AspLEI | GCGC | 1 cut(s) | 133 |
| BauI | CACGAG | 1 cut(s) | 336 |
| BbvI | GCAGC | 1 cut(s) | 373 |
| BccI | CCATC | 1 cut(s) | 160 |
| BceAI | ACGGC | 1 cut(s) | 196 |
| BfaI | CTAG | 1 cut(s) | 308 |
| BisI | GCNGC | 1 cut(s) | 362 |
| BlsI | GCNGC | 1 cut(s) | 363 |
| BpuEI | CTTGAG | 1 cut(s) | 377 |
| BsaWI | WCCGGW | 1 cut(s) | 232 |
| BseAI | TCCGGA | 1 cut(s) | 232 |
| BseGI | GGATG | 1 cut(s) | 50 |
| BseMII | CTCAG | 1 cut(s) | 263 |
| BseRI | GAGGAG | 1 cut(s) | 58 |
| BseXI | GCAGC | 1 cut(s) | 373 |
| Bsh1236I | CGCG | 1 cut(s) | 258 |
| BsiSI | CCGG | 1 cut(s) | 233 |
| Bsp13I | TCCGGA | 1 cut(s) | 232 |
| Bsp143I | GATC | 3 cut(s) | 103, 259, 279 |
| BspCNI | CTCAG | 1 cut(s) | 264 |
| BspEI | TCCGGA | 1 cut(s) | 232 |
| BspFNI | CGCG | 1 cut(s) | 258 |
| BspPI | GGATC | 1 cut(s) | 287 |
| BssMI | GATC | 3 cut(s) | 103, 259, 279 |
| BssSI | CACGAG | 1 cut(s) | 336 |
| Bst2BI | CACGAG | 1 cut(s) | 336 |
| Bst4CI | ACNGT | 2 cut(s) | 194, 316 |
| Bst6I | CTCTTC | 2 cut(s) | 76, 146 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 139, 317 |
| BstC8I | GCNNGC | 2 cut(s) | 290, 322 |
| BstDEI | CTNAG | 1 cut(s) | 272 |
| BstF5I | GGATG | 1 cut(s) | 50 |
| BstFNI | CGCG | 1 cut(s) | 258 |
| BstHHI | GCGC | 1 cut(s) | 133 |
| BstKTI | GATC | 3 cut(s) | 106, 262, 282 |
| BstMBI | GATC | 3 cut(s) | 103, 259, 279 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 139, 317 |
| BstUI | CGCG | 1 cut(s) | 258 |
| BstV1I | GCAGC | 1 cut(s) | 373 |
| BtsCI | GGATG | 1 cut(s) | 50 |
| Cac8I | GCNNGC | 2 cut(s) | 290, 322 |
| CfoI | GCGC | 1 cut(s) | 133 |
| CseI | GACGC | 1 cut(s) | 330 |
| CviAII | CATG | 3 cut(s) | 76, 246, 345 |
| CviJI | RGCY | 6 cut(s) | 5, 100, 183, 212, 288, 353 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 100, 183, 212, 288, 353 |
| DdeI | CTNAG | 1 cut(s) | 272 |
| DpnI | GATC | 3 cut(s) | 105, 261, 281 |
| DpnII | GATC | 3 cut(s) | 103, 259, 279 |
| Eam1104I | CTCTTC | 2 cut(s) | 76, 146 |
| EarI | CTCTTC | 2 cut(s) | 76, 146 |
| Eco57I | CTGAAG | 1 cut(s) | 170 |
| FaeI | CATG | 3 cut(s) | 79, 249, 348 |
| FaiI | YATR | 6 cut(s) | 77, 86, 124, 240, 247, 346 |
| FatI | CATG | 3 cut(s) | 75, 245, 344 |
| FblI | GTMKAC | 1 cut(s) | 177 |
| Fnu4HI | GCNGC | 1 cut(s) | 362 |
| FokI | GGATG | 1 cut(s) | 37 |
| Fsp4HI | GCNGC | 1 cut(s) | 362 |
| FspBI | CTAG | 1 cut(s) | 308 |
| GlaI | GCGC | 1 cut(s) | 132 |
| GluI | GCNGC | 1 cut(s) | 362 |
| HapII | CCGG | 1 cut(s) | 233 |
| HgaI | GACGC | 1 cut(s) | 330 |
| HhaI | GCGC | 1 cut(s) | 133 |
| Hin1II | CATG | 3 cut(s) | 79, 249, 348 |
| Hin6I | GCGC | 1 cut(s) | 131 |
| HinP1I | GCGC | 1 cut(s) | 131 |
| HincII | GTYRAC | 2 cut(s) | 22, 178 |
| HindII | GTYRAC | 2 cut(s) | 22, 178 |
| HindIII | AAGCTT | 1 cut(s) | 98 |
| HinfI | GANTC | 1 cut(s) | 154 |
| HpaII | CCGG | 1 cut(s) | 233 |
| Hpy166II | GTNNAC | 2 cut(s) | 22, 178 |
| Hpy188I | TCNGA | 2 cut(s) | 201, 273 |
| Hpy188III | TCNNGA | 5 cut(s) | 158, 188, 233, 356, 375 |
| Hpy8I | GTNNAC | 2 cut(s) | 22, 178 |
| Hpy99I | CGWCG | 2 cut(s) | 179, 182 |
| HpyAV | CCTTC | 1 cut(s) | 73 |
| HpyCH4III | ACNGT | 2 cut(s) | 194, 316 |
| HpyCH4IV | ACGT | 1 cut(s) | 174 |
| HpyCH4V | TGCA | 2 cut(s) | 44, 253 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 139, 317 |
| HpyF3I | CTNAG | 1 cut(s) | 272 |
| HpySE526I | ACGT | 1 cut(s) | 174 |
| Hsp92II | CATG | 3 cut(s) | 79, 249, 348 |
| HspAI | GCGC | 1 cut(s) | 131 |
| Kpn2I | TCCGGA | 1 cut(s) | 232 |
| Kzo9I | GATC | 3 cut(s) | 103, 259, 279 |
| LmnI | GCTCC | 1 cut(s) | 377 |
| LpnPI | CCDG | 6 cut(s) | 54, 173, 176, 198, 246, 334 |
| Lsp1109I | GCAGC | 1 cut(s) | 373 |
| MaeI | CTAG | 1 cut(s) | 308 |
| MaeII | ACGT | 1 cut(s) | 174 |
| MaeIII | GTNAC | 4 cut(s) | 158, 170, 241, 365 |
| MalI | GATC | 3 cut(s) | 105, 261, 281 |
| MboI | GATC | 3 cut(s) | 103, 259, 279 |
| MboII | GAAGA | 2 cut(s) | 63, 163 |
| MlyI | GAGTC | 1 cut(s) | 163 |
| MmeI | TCCRAC | 1 cut(s) | 257 |
| MnlI | CCTC | 4 cut(s) | 48, 79, 207, 343 |
| MroI | TCCGGA | 1 cut(s) | 232 |
| MseI | TTAA | 1 cut(s) | 96 |
| MspI | CCGG | 1 cut(s) | 233 |
| MvnI | CGCG | 1 cut(s) | 258 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 139, 317 |
| NdeII | GATC | 3 cut(s) | 103, 259, 279 |
| NlaIII | CATG | 3 cut(s) | 79, 249, 348 |
| NmuCI | GTSAC | 1 cut(s) | 158 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 334 |
| PkrI | GCNGC | 1 cut(s) | 363 |
| PleI | GAGTC | 1 cut(s) | 162 |
| PpsI | GAGTC | 1 cut(s) | 162 |
| SalI | GTCGAC | 1 cut(s) | 176 |
| SaqAI | TTAA | 1 cut(s) | 96 |
| SatI | GCNGC | 1 cut(s) | 362 |
| Sau3AI | GATC | 3 cut(s) | 103, 259, 279 |
| SchI | GAGTC | 1 cut(s) | 163 |
| SetI | ASST | 3 cut(s) | 102, 165, 177 |
| SgrDI | CGTCGACG | 1 cut(s) | 176 |
| SmlI | CTYRAG | 1 cut(s) | 356 |
| SmoI | CTYRAG | 1 cut(s) | 356 |
| SspI | AATATT | 1 cut(s) | 94 |
| SspMI | CTAG | 1 cut(s) | 308 |
| TaaI | ACNGT | 2 cut(s) | 194, 316 |
| TaiI | ACGT | 1 cut(s) | 177 |
| TaqI | TCGA | 1 cut(s) | 177 |
| Tru1I | TTAA | 1 cut(s) | 96 |
| Tru9I | TTAA | 1 cut(s) | 96 |
| TseFI | GTSAC | 1 cut(s) | 158 |
| TseI | GCWGC | 1 cut(s) | 361 |
| Tsp45I | GTSAC | 1 cut(s) | 158 |
| TspDTI | ATGAA | 1 cut(s) | 39 |
| TspGWI | ACGGA | 2 cut(s) | 43, 292 |
| XmiI | GTMKAC | 1 cut(s) | 177 |
| XspI | CTAG | 1 cut(s) | 308 |