gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 320 |
| AccII | CGCG | 2 cut(s) | 54, 375 |
| AciI | CCGC | 3 cut(s) | 172, 307, 375 |
| AclI | AACGTT | 1 cut(s) | 9 |
| AclWI | GGATC | 3 cut(s) | 208, 258, 271 |
| AcoI | YGGCCR | 1 cut(s) | 289 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 320 |
| AflIII | ACRYGT | 1 cut(s) | 216 |
| AgsI | TTSAA | 1 cut(s) | 83 |
| AluBI | AGCT | 5 cut(s) | 39, 44, 125, 303, 344 |
| AluI | AGCT | 5 cut(s) | 39, 44, 125, 303, 344 |
| AlwI | GGATC | 3 cut(s) | 208, 258, 271 |
| AoxI | GGCC | 2 cut(s) | 289, 376 |
| AspS9I | GGNCC | 4 cut(s) | 14, 275, 338, 377 |
| AsuHPI | GGTGA | 2 cut(s) | 58, 233 |
| AvaII | GGWCC | 3 cut(s) | 14, 275, 338 |
| BamHI | GGATCC | 1 cut(s) | 263 |
| BccI | CCATC | 2 cut(s) | 41, 322 |
| BceAI | ACGGC | 1 cut(s) | 276 |
| BisI | GCNGC | 1 cut(s) | 376 |
| BlpI | GCTNAGC | 1 cut(s) | 40 |
| BlsI | GCNGC | 1 cut(s) | 377 |
| Bme18I | GGWCC | 3 cut(s) | 14, 275, 338 |
| BmgT120I | GGNCC | 4 cut(s) | 14, 275, 338, 377 |
| BmiI | GGNNCC | 2 cut(s) | 265, 298 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 40 |
| BpuEI | CTTGAG | 1 cut(s) | 30 |
| BsaJI | CCNNGG | 2 cut(s) | 292, 319 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 320 |
| Bse3DI | GCAATG | 1 cut(s) | 86 |
| BseDI | CCNNGG | 2 cut(s) | 292, 319 |
| BseGI | GGATG | 1 cut(s) | 314 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 320 |
| BseMI | GCAATG | 1 cut(s) | 86 |
| BseMII | CTCAG | 1 cut(s) | 54 |
| BsgI | GTGCAG | 2 cut(s) | 138, 165 |
| Bsh1236I | CGCG | 2 cut(s) | 54, 375 |
| BshFI | GGCC | 2 cut(s) | 291, 378 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 320 |
| BsnI | GGCC | 2 cut(s) | 291, 378 |
| Bsp143I | GATC | 2 cut(s) | 200, 263 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 40 |
| BspACI | CCGC | 3 cut(s) | 172, 307, 375 |
| BspANI | GGCC | 2 cut(s) | 291, 378 |
| BspCNI | CTCAG | 1 cut(s) | 53 |
| BspFNI | CGCG | 2 cut(s) | 54, 375 |
| BspLI | GGNNCC | 2 cut(s) | 265, 298 |
| BspPI | GGATC | 3 cut(s) | 208, 258, 271 |
| BsrDI | GCAATG | 1 cut(s) | 86 |
| BssECI | CCNNGG | 2 cut(s) | 292, 319 |
| BssMI | GATC | 2 cut(s) | 200, 263 |
| Bst6I | CTCTTC | 1 cut(s) | 164 |
| BstC8I | GCNNGC | 1 cut(s) | 52 |
| BstDEI | CTNAG | 1 cut(s) | 40 |
| BstDSI | CCRYGG | 2 cut(s) | 292, 319 |
| BstEII | GGTNACC | 1 cut(s) | 239 |
| BstF5I | GGATG | 1 cut(s) | 314 |
| BstFNI | CGCG | 2 cut(s) | 54, 375 |
| BstKTI | GATC | 2 cut(s) | 203, 266 |
| BstMBI | GATC | 2 cut(s) | 200, 263 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 381 |
| BstPI | GGTNACC | 1 cut(s) | 239 |
| BstUI | CGCG | 2 cut(s) | 54, 375 |
| BstX2I | RGATCY | 2 cut(s) | 200, 263 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 197 |
| BstYI | RGATCY | 2 cut(s) | 200, 263 |
| BsuRI | GGCC | 2 cut(s) | 291, 378 |
| BtgI | CCRYGG | 2 cut(s) | 292, 319 |
| BtsCI | GGATG | 1 cut(s) | 314 |
| BtsI | GCAGTG | 1 cut(s) | 150 |
| BtsIMutI | CAGTG | 1 cut(s) | 150 |
| Cac8I | GCNNGC | 1 cut(s) | 52 |
| Cfr13I | GGNCC | 4 cut(s) | 14, 275, 338, 377 |
| CseI | GACGC | 1 cut(s) | 219 |
| CviAII | CATG | 3 cut(s) | 206, 254, 381 |
| CviJI | RGCY | 9 cut(s) | 39, 44, 125, 228, 258, 291, 303, 344, 378 |
| CviKI_1 | RGCY | 9 cut(s) | 39, 44, 125, 228, 258, 291, 303, 344, 378 |
| DdeI | CTNAG | 1 cut(s) | 40 |
| DpnI | GATC | 2 cut(s) | 202, 265 |
| DpnII | GATC | 2 cut(s) | 200, 263 |
| EaeI | YGGCCR | 1 cut(s) | 289 |
| Eam1104I | CTCTTC | 1 cut(s) | 164 |
| EarI | CTCTTC | 1 cut(s) | 164 |
| Eco47I | GGWCC | 3 cut(s) | 14, 275, 338 |
| Eco91I | GGTNACC | 1 cut(s) | 239 |
| EcoO65I | GGTNACC | 1 cut(s) | 239 |
| FaeI | CATG | 3 cut(s) | 209, 257, 384 |
| FaiI | YATR | 8 cut(s) | 24, 72, 207, 255, 286, 288, 366, 382 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 75, 107 |
| FatI | CATG | 3 cut(s) | 205, 253, 380 |
| FauI | CCCGC | 1 cut(s) | 314 |
| FauNDI | CATATG | 1 cut(s) | 286 |
| Fnu4HI | GCNGC | 1 cut(s) | 376 |
| FokI | GGATG | 1 cut(s) | 301 |
| Fsp4HI | GCNGC | 1 cut(s) | 376 |
| GluI | GCNGC | 1 cut(s) | 376 |
| HaeIII | GGCC | 2 cut(s) | 291, 378 |
| HgaI | GACGC | 1 cut(s) | 219 |
| Hin1II | CATG | 3 cut(s) | 209, 257, 384 |
| HincII | GTYRAC | 1 cut(s) | 144 |
| HindII | GTYRAC | 1 cut(s) | 144 |
| HinfI | GANTC | 2 cut(s) | 140, 368 |
| HphI | GGTGA | 2 cut(s) | 58, 233 |
| Hpy166II | GTNNAC | 1 cut(s) | 144 |
| Hpy188III | TCNNGA | 1 cut(s) | 80 |
| Hpy8I | GTNNAC | 1 cut(s) | 144 |
| HpyAV | CCTTC | 2 cut(s) | 129, 277 |
| HpyCH4IV | ACGT | 2 cut(s) | 9, 218 |
| HpyCH4V | TGCA | 2 cut(s) | 155, 182 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 381 |
| HpyF3I | CTNAG | 1 cut(s) | 40 |
| HpySE526I | ACGT | 2 cut(s) | 9, 218 |
| Hsp92II | CATG | 3 cut(s) | 209, 257, 384 |
| Kzo9I | GATC | 2 cut(s) | 200, 263 |
| LmnI | GCTCC | 2 cut(s) | 308, 349 |
| LpnPI | CCDG | 4 cut(s) | 210, 258, 313, 354 |
| MaeII | ACGT | 2 cut(s) | 9, 218 |
| MaeIII | GTNAC | 1 cut(s) | 239 |
| MalI | GATC | 2 cut(s) | 202, 265 |
| MboI | GATC | 2 cut(s) | 200, 263 |
| MboII | GAAGA | 1 cut(s) | 151 |
| MflI | RGATCY | 2 cut(s) | 200, 263 |
| MluCI | AATT | 1 cut(s) | 192 |
| MlyI | GAGTC | 1 cut(s) | 149 |
| MnlI | CCTC | 3 cut(s) | 27, 230, 363 |
| MslI | CAYNNNNRTG | 1 cut(s) | 258 |
| MvnI | CGCG | 2 cut(s) | 54, 375 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 381 |
| NdeI | CATATG | 1 cut(s) | 286 |
| NdeII | GATC | 2 cut(s) | 200, 263 |
| NlaIII | CATG | 3 cut(s) | 209, 257, 384 |
| NlaIV | GGNNCC | 2 cut(s) | 265, 298 |
| NmuCI | GTSAC | 1 cut(s) | 239 |
| PfeI | GAWTC | 1 cut(s) | 368 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 320 |
| PkrI | GCNGC | 1 cut(s) | 377 |
| PleI | GAGTC | 1 cut(s) | 148 |
| PpsI | GAGTC | 1 cut(s) | 148 |
| Psp1406I | AACGTT | 1 cut(s) | 9 |
| PspEI | GGTNACC | 1 cut(s) | 239 |
| PspN4I | GGNNCC | 2 cut(s) | 265, 298 |
| PspPI | GGNCC | 4 cut(s) | 14, 275, 338, 377 |
| PsuI | RGATCY | 2 cut(s) | 200, 263 |
| RseI | CAYNNNNRTG | 1 cut(s) | 258 |
| SatI | GCNGC | 1 cut(s) | 376 |
| Sau3AI | GATC | 2 cut(s) | 200, 263 |
| Sau96I | GGNCC | 4 cut(s) | 14, 275, 338, 377 |
| SchI | GAGTC | 1 cut(s) | 149 |
| SinI | GGWCC | 3 cut(s) | 14, 275, 338 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 258 |
| SmlI | CTYRAG | 1 cut(s) | 45 |
| SmoI | CTYRAG | 1 cut(s) | 45 |
| Sse9I | AATT | 1 cut(s) | 192 |
| SsiI | CCGC | 3 cut(s) | 172, 307, 375 |
| TaiI | ACGT | 2 cut(s) | 12, 221 |
| TaqI | TCGA | 2 cut(s) | 102, 355 |
| TasI | AATT | 1 cut(s) | 192 |
| TauI | GCSGC | 1 cut(s) | 378 |
| TfiI | GAWTC | 1 cut(s) | 368 |
| TscAI | CASTG | 1 cut(s) | 157 |
| TseFI | GTSAC | 1 cut(s) | 239 |
| Tsp45I | GTSAC | 1 cut(s) | 239 |
| TspDTI | ATGAA | 1 cut(s) | 17 |
| TspRI | CASTG | 1 cut(s) | 157 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 320 |
| VpaK11BI | GGWCC | 3 cut(s) | 14, 275, 338 |