Ribonuclease H protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AfaI | GTAC | 1 cut(s) | 247 |
| AgsI | TTSAA | 4 cut(s) | 66, 82, 216, 240 |
| AluBI | AGCT | 1 cut(s) | 85 |
| AluI | AGCT | 1 cut(s) | 85 |
| Alw21I | GWGCWC | 1 cut(s) | 144 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 254 |
| AsuHPI | GGTGA | 1 cut(s) | 16 |
| Bbv12I | GWGCWC | 1 cut(s) | 144 |
| BccI | CCATC | 1 cut(s) | 158 |
| BglII | AGATCT | 1 cut(s) | 24 |
| BmsI | GCATC | 2 cut(s) | 20, 111 |
| BpuEI | CTTGAG | 1 cut(s) | 155 |
| BsaJI | CCNNGG | 1 cut(s) | 107 |
| BseDI | CCNNGG | 1 cut(s) | 107 |
| BseGI | GGATG | 2 cut(s) | 44, 169 |
| BseRI | GAGGAG | 1 cut(s) | 152 |
| BsiHKAI | GWGCWC | 1 cut(s) | 144 |
| Bsp1286I | GDGCHC | 1 cut(s) | 144 |
| Bsp143I | GATC | 1 cut(s) | 24 |
| Bsp19I | CCATGG | 1 cut(s) | 107 |
| BssECI | CCNNGG | 1 cut(s) | 107 |
| BssMI | GATC | 1 cut(s) | 24 |
| BssT1I | CCWWGG | 1 cut(s) | 107 |
| Bst4CI | ACNGT | 2 cut(s) | 146, 250 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 130 |
| BstDSI | CCRYGG | 1 cut(s) | 107 |
| BstF5I | GGATG | 2 cut(s) | 44, 169 |
| BstKTI | GATC | 1 cut(s) | 27 |
| BstMBI | GATC | 1 cut(s) | 24 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 130, 139 |
| BstX2I | RGATCY | 1 cut(s) | 24 |
| BstYI | RGATCY | 1 cut(s) | 24 |
| BtgI | CCRYGG | 1 cut(s) | 107 |
| BtsCI | GGATG | 2 cut(s) | 44, 169 |
| CaiI | CAGNNNCTG | 1 cut(s) | 254 |
| Csp6I | GTAC | 1 cut(s) | 246 |
| CviAII | CATG | 1 cut(s) | 108 |
| CviJI | RGCY | 1 cut(s) | 85 |
| CviKI_1 | RGCY | 1 cut(s) | 85 |
| CviQI | GTAC | 1 cut(s) | 246 |
| DpnI | GATC | 1 cut(s) | 26 |
| DpnII | GATC | 1 cut(s) | 24 |
| Eco130I | CCWWGG | 1 cut(s) | 107 |
| EcoT14I | CCWWGG | 1 cut(s) | 107 |
| ErhI | CCWWGG | 1 cut(s) | 107 |
| FaeI | CATG | 1 cut(s) | 111 |
| FaiI | YATR | 3 cut(s) | 109, 207, 264 |
| FatI | CATG | 1 cut(s) | 107 |
| FokI | GGATG | 2 cut(s) | 31, 176 |
| Hin1II | CATG | 1 cut(s) | 111 |
| HincII | GTYRAC | 1 cut(s) | 171 |
| HindII | GTYRAC | 1 cut(s) | 171 |
| HinfI | GANTC | 4 cut(s) | 92, 199, 212, 224 |
| HphI | GGTGA | 1 cut(s) | 16 |
| Hpy166II | GTNNAC | 1 cut(s) | 171 |
| Hpy188I | TCNGA | 2 cut(s) | 120, 256 |
| Hpy8I | GTNNAC | 1 cut(s) | 171 |
| HpyCH4III | ACNGT | 2 cut(s) | 146, 250 |
| HpyCH4V | TGCA | 2 cut(s) | 124, 231 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 130, 139 |
| Hsp92II | CATG | 1 cut(s) | 111 |
| Kzo9I | GATC | 1 cut(s) | 24 |
| LmnI | GCTCC | 1 cut(s) | 139 |
| LpnPI | CCDG | 1 cut(s) | 138 |
| LweI | GCATC | 2 cut(s) | 20, 111 |
| MaeIII | GTNAC | 2 cut(s) | 4, 196 |
| MalI | GATC | 1 cut(s) | 26 |
| MboI | GATC | 1 cut(s) | 24 |
| MfeI | CAATTG | 1 cut(s) | 125 |
| MflI | RGATCY | 1 cut(s) | 24 |
| MhlI | GDGCHC | 1 cut(s) | 144 |
| MluCI | AATT | 6 cut(s) | 17, 39, 97, 125, 232, 267 |
| MlyI | GAGTC | 2 cut(s) | 86, 193 |
| MnlI | CCTC | 2 cut(s) | 79, 130 |
| MunI | CAATTG | 1 cut(s) | 125 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 130, 139 |
| NcoI | CCATGG | 1 cut(s) | 107 |
| NdeII | GATC | 1 cut(s) | 24 |
| NlaIII | CATG | 1 cut(s) | 111 |
| NmuCI | GTSAC | 2 cut(s) | 4, 196 |
| PfeI | GAWTC | 2 cut(s) | 212, 224 |
| PleI | GAGTC | 2 cut(s) | 86, 193 |
| PpsI | GAGTC | 2 cut(s) | 86, 193 |
| PstNI | CAGNNNCTG | 1 cut(s) | 254 |
| PsuI | RGATCY | 1 cut(s) | 24 |
| RsaI | GTAC | 1 cut(s) | 247 |
| RsaNI | GTAC | 1 cut(s) | 246 |
| Sau3AI | GATC | 1 cut(s) | 24 |
| SchI | GAGTC | 2 cut(s) | 86, 193 |
| SduI | GDGCHC | 1 cut(s) | 144 |
| SetI | ASST | 4 cut(s) | 71, 87, 178, 222 |
| SfaNI | GCATC | 2 cut(s) | 20, 111 |
| SmlI | CTYRAG | 1 cut(s) | 134 |
| SmoI | CTYRAG | 1 cut(s) | 134 |
| Sse9I | AATT | 6 cut(s) | 17, 39, 97, 125, 232, 267 |
| StyI | CCWWGG | 1 cut(s) | 107 |
| TaaI | ACNGT | 2 cut(s) | 146, 250 |
| TaqI | TCGA | 1 cut(s) | 87 |
| TasI | AATT | 6 cut(s) | 17, 39, 97, 125, 232, 267 |
| TfiI | GAWTC | 2 cut(s) | 212, 224 |
| TseFI | GTSAC | 2 cut(s) | 4, 196 |
| Tsp45I | GTSAC | 2 cut(s) | 4, 196 |
| TspDTI | ATGAA | 2 cut(s) | 45, 273 |