Mitochondrial protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 1 - 82 | 1.5e-09 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 215 |
| AciI | CCGC | 1 cut(s) | 438 |
| AcsI | RAATTY | 1 cut(s) | 59 |
| AfaI | GTAC | 2 cut(s) | 101, 322 |
| AflII | CTTAAG | 1 cut(s) | 113 |
| AflIII | ACRYGT | 1 cut(s) | 45 |
| AgsI | TTSAA | 3 cut(s) | 52, 159, 305 |
| Alw21I | GWGCWC | 1 cut(s) | 270 |
| Alw26I | GTCTC | 1 cut(s) | 233 |
| ApeKI | GCWGC | 2 cut(s) | 179, 329 |
| ApoI | RAATTY | 1 cut(s) | 59 |
| AsuHPI | GGTGA | 1 cut(s) | 158 |
| BbsI | GAAGAC | 1 cut(s) | 59 |
| Bbv12I | GWGCWC | 1 cut(s) | 270 |
| BbvI | GCAGC | 2 cut(s) | 166, 341 |
| BccI | CCATC | 1 cut(s) | 380 |
| BclI | TGATCA | 1 cut(s) | 171 |
| BcoDI | GTCTC | 1 cut(s) | 233 |
| BfaI | CTAG | 2 cut(s) | 36, 185 |
| BfrI | CTTAAG | 1 cut(s) | 113 |
| BisI | GCNGC | 2 cut(s) | 180, 330 |
| BlsI | GCNGC | 2 cut(s) | 181, 331 |
| BmcAI | AGTACT | 2 cut(s) | 101, 322 |
| BmiI | GGNNCC | 1 cut(s) | 349 |
| BpiI | GAAGAC | 1 cut(s) | 59 |
| BpuEI | CTTGAG | 1 cut(s) | 26 |
| BsaJI | CCNNGG | 1 cut(s) | 197 |
| Bse3DI | GCAATG | 2 cut(s) | 174, 339 |
| BseDI | CCNNGG | 1 cut(s) | 197 |
| BseMI | GCAATG | 2 cut(s) | 174, 339 |
| BseRI | GAGGAG | 1 cut(s) | 340 |
| BseXI | GCAGC | 2 cut(s) | 166, 341 |
| BsgI | GTGCAG | 1 cut(s) | 165 |
| BsiHKAI | GWGCWC | 1 cut(s) | 270 |
| BsmAI | GTCTC | 1 cut(s) | 233 |
| BsmBI | CGTCTC | 1 cut(s) | 233 |
| Bsp1286I | GDGCHC | 1 cut(s) | 270 |
| Bsp143I | GATC | 2 cut(s) | 127, 171 |
| BspACI | CCGC | 1 cut(s) | 438 |
| BspHI | TCATGA | 2 cut(s) | 382, 449 |
| BspLI | GGNNCC | 1 cut(s) | 349 |
| BspTI | CTTAAG | 1 cut(s) | 113 |
| BsrDI | GCAATG | 2 cut(s) | 174, 339 |
| BssECI | CCNNGG | 1 cut(s) | 197 |
| BssMI | GATC | 2 cut(s) | 127, 171 |
| BssT1I | CCWWGG | 1 cut(s) | 197 |
| Bst4CI | ACNGT | 2 cut(s) | 25, 223 |
| Bst6I | CTCTTC | 1 cut(s) | 358 |
| BstAFI | CTTAAG | 1 cut(s) | 113 |
| BstDEI | CTNAG | 1 cut(s) | 30 |
| BstEII | GGTNACC | 1 cut(s) | 192 |
| BstKTI | GATC | 2 cut(s) | 130, 174 |
| BstMAI | GTCTC | 1 cut(s) | 233 |
| BstMBI | GATC | 2 cut(s) | 127, 171 |
| BstNSI | RCATGY | 1 cut(s) | 49 |
| BstPI | GGTNACC | 1 cut(s) | 192 |
| BstV1I | GCAGC | 2 cut(s) | 166, 341 |
| BstV2I | GAAGAC | 1 cut(s) | 59 |
| BtsI | GCAGTG | 1 cut(s) | 439 |
| BtsIMutI | CAGTG | 1 cut(s) | 439 |
| CciI | TCATGA | 2 cut(s) | 382, 449 |
| CseI | GACGC | 1 cut(s) | 250 |
| Csp6I | GTAC | 2 cut(s) | 100, 321 |
| CviAII | CATG | 3 cut(s) | 46, 383, 450 |
| CviJI | RGCY | 1 cut(s) | 348 |
| CviKI_1 | RGCY | 1 cut(s) | 348 |
| CviQI | GTAC | 2 cut(s) | 100, 321 |
| DdeI | CTNAG | 1 cut(s) | 30 |
| DpnI | GATC | 2 cut(s) | 129, 173 |
| DpnII | GATC | 2 cut(s) | 127, 171 |
| Eam1104I | CTCTTC | 1 cut(s) | 358 |
| EarI | CTCTTC | 1 cut(s) | 358 |
| Eco130I | CCWWGG | 1 cut(s) | 197 |
| Eco91I | GGTNACC | 1 cut(s) | 192 |
| EcoO65I | GGTNACC | 1 cut(s) | 192 |
| EcoRI | GAATTC | 1 cut(s) | 59 |
| EcoT14I | CCWWGG | 1 cut(s) | 197 |
| ErhI | CCWWGG | 1 cut(s) | 197 |
| Esp3I | CGTCTC | 1 cut(s) | 233 |
| FaeI | CATG | 3 cut(s) | 49, 386, 453 |
| FatI | CATG | 3 cut(s) | 45, 382, 449 |
| FauI | CCCGC | 1 cut(s) | 431 |
| FbaI | TGATCA | 1 cut(s) | 171 |
| Fnu4HI | GCNGC | 2 cut(s) | 180, 330 |
| Fsp4HI | GCNGC | 2 cut(s) | 180, 330 |
| FspBI | CTAG | 2 cut(s) | 36, 185 |
| GluI | GCNGC | 2 cut(s) | 180, 330 |
| HgaI | GACGC | 1 cut(s) | 250 |
| Hin1II | CATG | 3 cut(s) | 49, 386, 453 |
| HphI | GGTGA | 1 cut(s) | 158 |
| Hpy188III | TCNNGA | 5 cut(s) | 64, 125, 302, 383, 450 |
| Hpy99I | CGWCG | 1 cut(s) | 238 |
| HpyAV | CCTTC | 1 cut(s) | 182 |
| HpyCH4III | ACNGT | 2 cut(s) | 25, 223 |
| HpyCH4V | TGCA | 2 cut(s) | 182, 343 |
| HpyF3I | CTNAG | 1 cut(s) | 30 |
| Hsp92II | CATG | 3 cut(s) | 49, 386, 453 |
| Ksp22I | TGATCA | 1 cut(s) | 171 |
| Kzo9I | GATC | 2 cut(s) | 127, 171 |
| LmnI | GCTCC | 1 cut(s) | 353 |
| LpnPI | CCDG | 4 cut(s) | 77, 129, 357, 408 |
| Lsp1109I | GCAGC | 2 cut(s) | 166, 341 |
| MaeI | CTAG | 2 cut(s) | 36, 185 |
| MaeIII | GTNAC | 1 cut(s) | 192 |
| MalI | GATC | 2 cut(s) | 129, 173 |
| MboI | GATC | 2 cut(s) | 127, 171 |
| MboII | GAAGA | 4 cut(s) | 64, 345, 393, 396 |
| MfeI | CAATTG | 1 cut(s) | 90 |
| MhlI | GDGCHC | 1 cut(s) | 270 |
| MluCI | AATT | 4 cut(s) | 59, 90, 120, 307 |
| MnlI | CCTC | 2 cut(s) | 361, 421 |
| MseI | TTAA | 3 cut(s) | 42, 114, 282 |
| MslI | CAYNNNNRTG | 1 cut(s) | 448 |
| MspCI | CTTAAG | 1 cut(s) | 113 |
| MunI | CAATTG | 1 cut(s) | 90 |
| NdeII | GATC | 2 cut(s) | 127, 171 |
| NlaIII | CATG | 3 cut(s) | 49, 386, 453 |
| NlaIV | GGNNCC | 1 cut(s) | 349 |
| NspI | RCATGY | 1 cut(s) | 49 |
| PagI | TCATGA | 2 cut(s) | 382, 449 |
| PciI | ACATGT | 1 cut(s) | 45 |
| PkrI | GCNGC | 2 cut(s) | 181, 331 |
| PscI | ACATGT | 1 cut(s) | 45 |
| PsiI | TTATAA | 1 cut(s) | 215 |
| PspEI | GGTNACC | 1 cut(s) | 192 |
| PspN4I | GGNNCC | 1 cut(s) | 349 |
| RsaI | GTAC | 2 cut(s) | 101, 322 |
| RsaNI | GTAC | 2 cut(s) | 100, 321 |
| RseI | CAYNNNNRTG | 1 cut(s) | 448 |
| SaqAI | TTAA | 3 cut(s) | 42, 114, 282 |
| SatI | GCNGC | 2 cut(s) | 180, 330 |
| Sau3AI | GATC | 2 cut(s) | 127, 171 |
| ScaI | AGTACT | 2 cut(s) | 101, 322 |
| SduI | GDGCHC | 1 cut(s) | 270 |
| SetI | ASST | 1 cut(s) | 17 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 448 |
| SmlI | CTYRAG | 2 cut(s) | 5, 113 |
| SmoI | CTYRAG | 2 cut(s) | 5, 113 |
| Sse9I | AATT | 4 cut(s) | 59, 90, 120, 307 |
| SsiI | CCGC | 1 cut(s) | 438 |
| SspMI | CTAG | 2 cut(s) | 36, 185 |
| StyI | CCWWGG | 1 cut(s) | 197 |
| TaaI | ACNGT | 2 cut(s) | 25, 223 |
| TaqI | TCGA | 2 cut(s) | 124, 264 |
| TasI | AATT | 4 cut(s) | 59, 90, 120, 307 |
| TatI | WGTACW | 2 cut(s) | 99, 320 |
| Tru1I | TTAA | 3 cut(s) | 42, 114, 282 |
| Tru9I | TTAA | 3 cut(s) | 42, 114, 282 |
| TscAI | CASTG | 1 cut(s) | 439 |
| TseI | GCWGC | 2 cut(s) | 179, 329 |
| TspGWI | ACGGA | 1 cut(s) | 251 |
| TspRI | CASTG | 1 cut(s) | 439 |
| Vha464I | CTTAAG | 1 cut(s) | 113 |
| XapI | RAATTY | 1 cut(s) | 59 |
| XceI | RCATGY | 1 cut(s) | 49 |
| XspI | CTAG | 2 cut(s) | 36, 185 |
| ZrmI | AGTACT | 2 cut(s) | 101, 322 |