Belongs to the cytochrome P450 family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Retrotran_gag_2 | PF14223 | 63 - 197 | 1.5e-17 | gag-polypeptide of LTR copia-type |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 29, 912 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1175 |
| AccI | GTMKAC | 1 cut(s) | 1847 |
| AclWI | GGATC | 2 cut(s) | 1442, 1794 |
| AcsI | RAATTY | 4 cut(s) | 479, 714, 1544, 1852 |
| AcuI | CTGAAG | 1 cut(s) | 1212 |
| AfaI | GTAC | 2 cut(s) | 407, 1440 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 1175 |
| AgsI | TTSAA | 6 cut(s) | 358, 607, 719, 864, 1254, 1775 |
| AjnI | CCWGG | 2 cut(s) | 65, 1882 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1210, 1242, 1735, 1767 |
| AleI | CACNNNNGTG | 1 cut(s) | 93 |
| AluBI | AGCT | 7 cut(s) | 443, 647, 875, 1139, 1510, 1778, 1838 |
| AluI | AGCT | 7 cut(s) | 443, 647, 875, 1139, 1510, 1778, 1838 |
| Alw21I | GWGCWC | 1 cut(s) | 1303 |
| Alw26I | GTCTC | 2 cut(s) | 44, 1589 |
| Alw44I | GTGCAC | 1 cut(s) | 1299 |
| AlwI | GGATC | 2 cut(s) | 1442, 1794 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1538 |
| Ama87I | CYCGRG | 2 cut(s) | 192, 870 |
| ApaLI | GTGCAC | 1 cut(s) | 1299 |
| ApeKI | GCWGC | 3 cut(s) | 362, 785, 1412 |
| ApoI | RAATTY | 4 cut(s) | 479, 714, 1544, 1852 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 706, 738 |
| AseI | ATTAAT | 1 cut(s) | 1431 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1770 |
| AsuHPI | GGTGA | 5 cut(s) | 80, 170, 1077, 1137, 1322 |
| AvaI | CYCGRG | 2 cut(s) | 192, 870 |
| AxyI | CCTNAGG | 1 cut(s) | 1626 |
| BaeGI | GKGCMC | 1 cut(s) | 1303 |
| BbsI | GAAGAC | 1 cut(s) | 491 |
| Bbv12I | GWGCWC | 1 cut(s) | 1303 |
| BbvI | GCAGC | 3 cut(s) | 349, 772, 1399 |
| BccI | CCATC | 6 cut(s) | 38, 116, 158, 1459, 1652, 1787 |
| BceAI | ACGGC | 1 cut(s) | 539 |
| BciT130I | CCWGG | 2 cut(s) | 67, 1884 |
| BclI | TGATCA | 1 cut(s) | 466 |
| BcoDI | GTCTC | 2 cut(s) | 44, 1589 |
| BfaI | CTAG | 4 cut(s) | 699, 1206, 1677, 1757 |
| BfmI | CTRYAG | 2 cut(s) | 252, 940 |
| BfuAI | ACCTGC | 2 cut(s) | 29, 912 |
| BglII | AGATCT | 1 cut(s) | 569 |
| BisI | GCNGC | 3 cut(s) | 363, 786, 1413 |
| BlpI | GCTNAGC | 1 cut(s) | 1416 |
| BlsI | GCNGC | 3 cut(s) | 364, 787, 1414 |
| BmcAI | AGTACT | 2 cut(s) | 407, 1440 |
| Bme1390I | CCNGG | 2 cut(s) | 67, 1884 |
| BmeT110I | CYCGRG | 2 cut(s) | 192, 870 |
| BmrFI | CCNGG | 2 cut(s) | 67, 1884 |
| BmsI | GCATC | 5 cut(s) | 247, 463, 680, 1048, 1788 |
| BpiI | GAAGAC | 1 cut(s) | 491 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1416 |
| BpuEI | CTTGAG | 2 cut(s) | 296, 1376 |
| Bsa29I | ATCGAT | 1 cut(s) | 436 |
| BsaJI | CCNNGG | 1 cut(s) | 66 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 1175 |
| Bse118I | RCCGGY | 2 cut(s) | 1289, 1801 |
| Bse1I | ACTGG | 3 cut(s) | 1117, 1436, 1767 |
| Bse21I | CCTNAGG | 1 cut(s) | 1626 |
| Bse3DI | GCAATG | 1 cut(s) | 1671 |
| BseBI | CCWGG | 2 cut(s) | 67, 1884 |
| BseCI | ATCGAT | 1 cut(s) | 436 |
| BseDI | CCNNGG | 1 cut(s) | 66 |
| BseGI | GGATG | 2 cut(s) | 1390, 1803 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 1175 |
| BseMI | GCAATG | 1 cut(s) | 1671 |
| BseMII | CTCAG | 2 cut(s) | 905, 1407 |
| BseNI | ACTGG | 3 cut(s) | 1117, 1436, 1767 |
| BseRI | GAGGAG | 1 cut(s) | 1572 |
| BseSI | GKGCMC | 1 cut(s) | 1303 |
| BseXI | GCAGC | 3 cut(s) | 349, 772, 1399 |
| BshVI | ATCGAT | 1 cut(s) | 436 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1303 |
| BsiHKCI | CYCGRG | 2 cut(s) | 192, 870 |
| BsiSI | CCGG | 2 cut(s) | 1290, 1802 |
| BslFI | GGGAC | 1 cut(s) | 1178 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 1175 |
| BsmAI | GTCTC | 2 cut(s) | 44, 1589 |
| BsmFI | GGGAC | 1 cut(s) | 1178 |
| BsmI | GAATGC | 1 cut(s) | 1108 |
| BsoBI | CYCGRG | 2 cut(s) | 192, 870 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1303 |
| Bsp143I | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1416 |
| BspCNI | CTCAG | 2 cut(s) | 904, 1408 |
| BspDI | ATCGAT | 1 cut(s) | 436 |
| BspHI | TCATGA | 2 cut(s) | 231, 1789 |
| BspMI | ACCTGC | 2 cut(s) | 29, 912 |
| BspPI | GGATC | 2 cut(s) | 1442, 1794 |
| BsrDI | GCAATG | 1 cut(s) | 1671 |
| BsrFI | RCCGGY | 2 cut(s) | 1289, 1801 |
| BsrI | ACTGG | 3 cut(s) | 1117, 1436, 1767 |
| BssAI | RCCGGY | 2 cut(s) | 1289, 1801 |
| BssECI | CCNNGG | 1 cut(s) | 66 |
| BssMI | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| Bst2UI | CCWGG | 2 cut(s) | 67, 1884 |
| Bst4CI | ACNGT | 3 cut(s) | 944, 1260, 1310 |
| Bst6I | CTCTTC | 1 cut(s) | 1024 |
| BstC8I | GCNNGC | 6 cut(s) | 695, 770, 1108, 1363, 1803, 1836 |
| BstDEI | CTNAG | 3 cut(s) | 891, 1416, 1626 |
| BstF5I | GGATG | 2 cut(s) | 1390, 1803 |
| BstKTI | GATC | 7 cut(s) | 436, 469, 572, 1390, 1450, 1501, 1789 |
| BstMAI | GTCTC | 2 cut(s) | 44, 1589 |
| BstMBI | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 1637, 1775 |
| BstNI | CCWGG | 2 cut(s) | 67, 1884 |
| BstNSI | RCATGY | 2 cut(s) | 697, 805 |
| BstSCI | CCNGG | 2 cut(s) | 65, 1882 |
| BstSFI | CTRYAG | 2 cut(s) | 252, 940 |
| BstSLI | GKGCMC | 1 cut(s) | 1303 |
| BstV1I | GCAGC | 3 cut(s) | 349, 772, 1399 |
| BstV2I | GAAGAC | 1 cut(s) | 491 |
| BstX2I | RGATCY | 2 cut(s) | 569, 1447 |
| BstYI | RGATCY | 2 cut(s) | 569, 1447 |
| Bsu15I | ATCGAT | 1 cut(s) | 436 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1626 |
| BsuTUI | ATCGAT | 1 cut(s) | 436 |
| BtsCI | GGATG | 2 cut(s) | 1390, 1803 |
| BtsIMutI | CAGTG | 1 cut(s) | 1110 |
| BveI | ACCTGC | 2 cut(s) | 29, 912 |
| Cac8I | GCNNGC | 6 cut(s) | 695, 770, 1108, 1363, 1803, 1836 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1538 |
| CciI | TCATGA | 2 cut(s) | 231, 1789 |
| Cfr10I | RCCGGY | 2 cut(s) | 1289, 1801 |
| ClaI | ATCGAT | 1 cut(s) | 436 |
| CseI | GACGC | 1 cut(s) | 1833 |
| Csp6I | GTAC | 2 cut(s) | 406, 1439 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1763, 1798 |
| CviAII | CATG | 8 cut(s) | 101, 232, 556, 694, 802, 983, 1409, 1790 |
| CviQI | GTAC | 2 cut(s) | 406, 1439 |
| DdeI | CTNAG | 3 cut(s) | 891, 1416, 1626 |
| DpnI | GATC | 7 cut(s) | 435, 468, 571, 1389, 1449, 1500, 1788 |
| DpnII | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| DraI | TTTAAA | 1 cut(s) | 421 |
| Eam1104I | CTCTTC | 1 cut(s) | 1024 |
| EarI | CTCTTC | 1 cut(s) | 1024 |
| Eco32I | GATATC | 1 cut(s) | 1817 |
| Eco57I | CTGAAG | 1 cut(s) | 1212 |
| Eco81I | CCTNAGG | 1 cut(s) | 1626 |
| Eco88I | CYCGRG | 2 cut(s) | 192, 870 |
| EcoRII | CCWGG | 2 cut(s) | 65, 1882 |
| EcoRV | GATATC | 1 cut(s) | 1817 |
| EcoT22I | ATGCAT | 1 cut(s) | 354 |
| FaeI | CATG | 8 cut(s) | 104, 235, 559, 697, 805, 986, 1412, 1793 |
| FaqI | GGGAC | 1 cut(s) | 1178 |
| FatI | CATG | 8 cut(s) | 100, 231, 555, 693, 801, 982, 1408, 1789 |
| FauNDI | CATATG | 1 cut(s) | 1579 |
| FbaI | TGATCA | 1 cut(s) | 466 |
| FblI | GTMKAC | 1 cut(s) | 1847 |
| Fnu4HI | GCNGC | 3 cut(s) | 363, 786, 1413 |
| FokI | GGATG | 2 cut(s) | 1397, 1810 |
| Fsp4HI | GCNGC | 3 cut(s) | 363, 786, 1413 |
| FspBI | CTAG | 4 cut(s) | 699, 1206, 1677, 1757 |
| GluI | GCNGC | 3 cut(s) | 363, 786, 1413 |
| HapII | CCGG | 2 cut(s) | 1290, 1802 |
| HgaI | GACGC | 1 cut(s) | 1833 |
| Hin1II | CATG | 8 cut(s) | 104, 235, 559, 697, 805, 986, 1412, 1793 |
| HindIII | AAGCTT | 2 cut(s) | 1508, 1836 |
| HinfI | GANTC | 8 cut(s) | 13, 338, 392, 487, 751, 910, 1535, 1560 |
| HpaII | CCGG | 2 cut(s) | 1290, 1802 |
| HphI | GGTGA | 5 cut(s) | 80, 170, 1077, 1137, 1322 |
| Hpy166II | GTNNAC | 4 cut(s) | 140, 221, 1301, 1848 |
| Hpy188I | TCNGA | 8 cut(s) | 208, 337, 894, 928, 1159, 1278, 1336, 1371 |
| Hpy188III | TCNNGA | 5 cut(s) | 194, 232, 470, 1514, 1790 |
| Hpy8I | GTNNAC | 4 cut(s) | 140, 221, 1301, 1848 |
| HpyAV | CCTTC | 8 cut(s) | 101, 312, 352, 822, 1206, 1341, 1479, 1741 |
| HpyCH4III | ACNGT | 3 cut(s) | 944, 1260, 1310 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 1637, 1775 |
| HpyF3I | CTNAG | 3 cut(s) | 891, 1416, 1626 |
| Hsp92II | CATG | 8 cut(s) | 104, 235, 559, 697, 805, 986, 1412, 1793 |
| KroI | GCCGGC | 1 cut(s) | 1801 |
| KroNI | GCCGGC | 1 cut(s) | 1803 |
| Ksp22I | TGATCA | 1 cut(s) | 466 |
| Kzo9I | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| Lsp1109I | GCAGC | 3 cut(s) | 349, 772, 1399 |
| LweI | GCATC | 5 cut(s) | 247, 463, 680, 1048, 1788 |
| MaeI | CTAG | 4 cut(s) | 699, 1206, 1677, 1757 |
| MaeIII | GTNAC | 4 cut(s) | 515, 988, 1310, 1566 |
| MalI | GATC | 7 cut(s) | 435, 468, 571, 1389, 1449, 1500, 1788 |
| MboI | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| MboII | GAAGA | 6 cut(s) | 220, 491, 960, 1011, 1191, 1191 |
| MflI | RGATCY | 2 cut(s) | 569, 1447 |
| MhlI | GDGCHC | 1 cut(s) | 1303 |
| MlyI | GAGTC | 2 cut(s) | 7, 1569 |
| MmeI | TCCRAC | 2 cut(s) | 186, 1748 |
| Mph1103I | ATGCAT | 1 cut(s) | 354 |
| MroNI | GCCGGC | 1 cut(s) | 1801 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1770 |
| MseI | TTAA | 6 cut(s) | 263, 378, 420, 1245, 1431, 1685 |
| MslI | CAYNNNNRTG | 2 cut(s) | 93, 1742 |
| MspI | CCGG | 2 cut(s) | 1290, 1802 |
| MspR9I | CCNGG | 2 cut(s) | 67, 1884 |
| Mva1269I | GAATGC | 1 cut(s) | 1108 |
| MvaI | CCWGG | 2 cut(s) | 67, 1884 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 1637, 1775 |
| NaeI | GCCGGC | 1 cut(s) | 1803 |
| NdeI | CATATG | 1 cut(s) | 1579 |
| NdeII | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| NgoMIV | GCCGGC | 1 cut(s) | 1801 |
| NlaIII | CATG | 8 cut(s) | 104, 235, 559, 697, 805, 986, 1412, 1793 |
| NmuCI | GTSAC | 4 cut(s) | 515, 988, 1310, 1566 |
| NsiI | ATGCAT | 1 cut(s) | 354 |
| NspI | RCATGY | 2 cut(s) | 697, 805 |
| OliI | CACNNNNGTG | 1 cut(s) | 93 |
| PaeI | GCATGC | 1 cut(s) | 697 |
| PaeR7I | CTCGAG | 2 cut(s) | 192, 870 |
| PagI | TCATGA | 2 cut(s) | 231, 1789 |
| PctI | GAATGC | 1 cut(s) | 1108 |
| PdiI | GCCGGC | 1 cut(s) | 1803 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1770 |
| PfeI | GAWTC | 6 cut(s) | 338, 392, 487, 751, 910, 1535 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1175 |
| PkrI | GCNGC | 3 cut(s) | 364, 787, 1414 |
| PleI | GAGTC | 2 cut(s) | 7, 1568 |
| PpsI | GAGTC | 2 cut(s) | 7, 1568 |
| PshBI | ATTAAT | 1 cut(s) | 1431 |
| Psp6I | CCWGG | 2 cut(s) | 65, 1882 |
| PspGI | CCWGG | 2 cut(s) | 65, 1882 |
| PspXI | VCTCGAGB | 1 cut(s) | 870 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1538 |
| PsuI | RGATCY | 2 cut(s) | 569, 1447 |
| RsaI | GTAC | 2 cut(s) | 407, 1440 |
| RsaNI | GTAC | 2 cut(s) | 406, 1439 |
| RseI | CAYNNNNRTG | 2 cut(s) | 93, 1742 |
| SaqAI | TTAA | 6 cut(s) | 263, 378, 420, 1245, 1431, 1685 |
| SatI | GCNGC | 3 cut(s) | 363, 786, 1413 |
| Sau3AI | GATC | 7 cut(s) | 433, 466, 569, 1387, 1447, 1498, 1786 |
| ScaI | AGTACT | 2 cut(s) | 407, 1440 |
| SchI | GAGTC | 2 cut(s) | 7, 1569 |
| ScrFI | CCNGG | 2 cut(s) | 67, 1884 |
| SduI | GDGCHC | 1 cut(s) | 1303 |
| SfaNI | GCATC | 5 cut(s) | 247, 463, 680, 1048, 1788 |
| SfcI | CTRYAG | 2 cut(s) | 252, 940 |
| Sfr274I | CTCGAG | 2 cut(s) | 192, 870 |
| SlaI | CTCGAG | 2 cut(s) | 192, 870 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 93, 1742 |
| SmlI | CTYRAG | 4 cut(s) | 192, 311, 870, 1391 |
| SmoI | CTYRAG | 4 cut(s) | 192, 311, 870, 1391 |
| SphI | GCATGC | 1 cut(s) | 697 |
| SspI | AATATT | 2 cut(s) | 706, 1221 |
| SspMI | CTAG | 4 cut(s) | 699, 1206, 1677, 1757 |
| StyD4I | CCNGG | 2 cut(s) | 65, 1882 |
| TaaI | ACNGT | 3 cut(s) | 944, 1260, 1310 |
| TaqI | TCGA | 5 cut(s) | 11, 193, 436, 871, 1513 |
| TaqII | GACCGA | 1 cut(s) | 25 |
| TatI | WGTACW | 2 cut(s) | 405, 1438 |
| TfiI | GAWTC | 6 cut(s) | 338, 392, 487, 751, 910, 1535 |
| Tru1I | TTAA | 6 cut(s) | 263, 378, 420, 1245, 1431, 1685 |
| Tru9I | TTAA | 6 cut(s) | 263, 378, 420, 1245, 1431, 1685 |
| TscAI | CASTG | 1 cut(s) | 1117 |
| TseFI | GTSAC | 4 cut(s) | 515, 988, 1310, 1566 |
| TseI | GCWGC | 3 cut(s) | 362, 785, 1412 |
| Tsp45I | GTSAC | 4 cut(s) | 515, 988, 1310, 1566 |
| TspRI | CASTG | 1 cut(s) | 1117 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1175 |
| VneI | GTGCAC | 1 cut(s) | 1299 |
| VspI | ATTAAT | 1 cut(s) | 1431 |
| XapI | RAATTY | 4 cut(s) | 479, 714, 1544, 1852 |
| XceI | RCATGY | 2 cut(s) | 697, 805 |
| XhoI | CTCGAG | 2 cut(s) | 192, 870 |
| XmiI | GTMKAC | 1 cut(s) | 1847 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1770 |
| XspI | CTAG | 4 cut(s) | 699, 1206, 1677, 1757 |
| ZrmI | AGTACT | 2 cut(s) | 407, 1440 |
| Zsp2I | ATGCAT | 1 cut(s) | 354 |