U-box domain-containing protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 239 |
| AccB1I | GGYRCC | 1 cut(s) | 407 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 373 |
| AccI | GTMKAC | 1 cut(s) | 114 |
| AciI | CCGC | 9 cut(s) | 131, 227, 399, 402, 411, 423, 426, 432, 435 |
| AcoI | YGGCCR | 2 cut(s) | 3, 378 |
| AcsI | RAATTY | 2 cut(s) | 218, 369 |
| AcyI | GRCGYC | 2 cut(s) | 236, 408 |
| AfaI | GTAC | 2 cut(s) | 47, 209 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 373 |
| AgeI | ACCGGT | 1 cut(s) | 354 |
| AgsI | TTSAA | 1 cut(s) | 88 |
| AjnI | CCWGG | 1 cut(s) | 197 |
| AluBI | AGCT | 5 cut(s) | 92, 183, 189, 314, 326 |
| AluI | AGCT | 5 cut(s) | 92, 183, 189, 314, 326 |
| Alw26I | GTCTC | 1 cut(s) | 294 |
| Ama87I | CYCGRG | 1 cut(s) | 184 |
| AoxI | GGCC | 3 cut(s) | 3, 213, 378 |
| ApeKI | GCWGC | 1 cut(s) | 396 |
| ApoI | RAATTY | 2 cut(s) | 218, 369 |
| AsiGI | ACCGGT | 1 cut(s) | 354 |
| AspLEI | GCGC | 1 cut(s) | 410 |
| AsuNHI | GCTAGC | 1 cut(s) | 322 |
| AvaI | CYCGRG | 1 cut(s) | 184 |
| BalI | TGGCCA | 2 cut(s) | 5, 380 |
| BanI | GGYRCC | 1 cut(s) | 407 |
| BbvI | GCAGC | 1 cut(s) | 408 |
| BccI | CCATC | 3 cut(s) | 71, 131, 196 |
| BciT130I | CCWGG | 1 cut(s) | 199 |
| BcoDI | GTCTC | 1 cut(s) | 294 |
| BfaI | CTAG | 4 cut(s) | 69, 134, 323, 439 |
| BfoI | RGCGCY | 1 cut(s) | 411 |
| BisI | GCNGC | 8 cut(s) | 131, 227, 397, 400, 411, 424, 433, 436 |
| BlsI | GCNGC | 8 cut(s) | 132, 228, 398, 401, 412, 425, 434, 437 |
| Bme1390I | CCNGG | 1 cut(s) | 199 |
| BmeT110I | CYCGRG | 1 cut(s) | 184 |
| BmiI | GGNNCC | 1 cut(s) | 409 |
| BmrFI | CCNGG | 1 cut(s) | 199 |
| BmsI | GCATC | 2 cut(s) | 66, 292 |
| BmtI | GCTAGC | 1 cut(s) | 326 |
| BsaHI | GRCGYC | 2 cut(s) | 236, 408 |
| BsaJI | CCNNGG | 1 cut(s) | 103 |
| BsaWI | WCCGGW | 1 cut(s) | 354 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 373 |
| Bse118I | RCCGGY | 1 cut(s) | 354 |
| BseBI | CCWGG | 1 cut(s) | 199 |
| BseDI | CCNNGG | 1 cut(s) | 103 |
| BseGI | GGATG | 1 cut(s) | 207 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 373 |
| BseRI | GAGGAG | 1 cut(s) | 92 |
| BseXI | GCAGC | 1 cut(s) | 408 |
| BshFI | GGCC | 3 cut(s) | 5, 215, 380 |
| BshNI | GGYRCC | 1 cut(s) | 407 |
| BshTI | ACCGGT | 1 cut(s) | 354 |
| BsiHKCI | CYCGRG | 1 cut(s) | 184 |
| BsiSI | CCGG | 2 cut(s) | 159, 355 |
| BsiWI | CGTACG | 1 cut(s) | 45 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 373 |
| BsmAI | GTCTC | 1 cut(s) | 294 |
| BsnI | GGCC | 3 cut(s) | 5, 215, 380 |
| BsoBI | CYCGRG | 1 cut(s) | 184 |
| Bsp143I | GATC | 1 cut(s) | 177 |
| BspACI | CCGC | 9 cut(s) | 131, 227, 399, 402, 411, 423, 426, 432, 435 |
| BspANI | GGCC | 3 cut(s) | 5, 215, 380 |
| BspLI | GGNNCC | 1 cut(s) | 409 |
| BspOI | GCTAGC | 1 cut(s) | 326 |
| BspQI | GCTCTTC | 1 cut(s) | 333 |
| BspT107I | GGYRCC | 1 cut(s) | 407 |
| BsrFI | RCCGGY | 1 cut(s) | 354 |
| BssAI | RCCGGY | 1 cut(s) | 354 |
| BssECI | CCNNGG | 1 cut(s) | 103 |
| BssMI | GATC | 1 cut(s) | 177 |
| BssNI | GRCGYC | 2 cut(s) | 236, 408 |
| Bst2UI | CCWGG | 1 cut(s) | 199 |
| Bst4CI | ACNGT | 1 cut(s) | 418 |
| Bst6I | CTCTTC | 1 cut(s) | 333 |
| BstACI | GRCGYC | 2 cut(s) | 236, 408 |
| BstC8I | GCNNGC | 2 cut(s) | 307, 324 |
| BstF5I | GGATG | 1 cut(s) | 207 |
| BstH2I | RGCGCY | 1 cut(s) | 411 |
| BstHHI | GCGC | 1 cut(s) | 410 |
| BstKTI | GATC | 1 cut(s) | 180 |
| BstMAI | GTCTC | 1 cut(s) | 294 |
| BstMBI | GATC | 1 cut(s) | 177 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 311, 405, 429, 432 |
| BstNI | CCWGG | 1 cut(s) | 199 |
| BstSCI | CCNGG | 1 cut(s) | 197 |
| BstV1I | GCAGC | 1 cut(s) | 408 |
| BsuRI | GGCC | 3 cut(s) | 5, 215, 380 |
| BtsCI | GGATG | 1 cut(s) | 207 |
| BtsIMutI | CAGTG | 2 cut(s) | 17, 414 |
| Cac8I | GCNNGC | 2 cut(s) | 307, 324 |
| CfoI | GCGC | 1 cut(s) | 410 |
| Cfr10I | RCCGGY | 1 cut(s) | 354 |
| Csp6I | GTAC | 2 cut(s) | 46, 208 |
| CspAI | ACCGGT | 1 cut(s) | 354 |
| CviQI | GTAC | 2 cut(s) | 46, 208 |
| DinI | GGCGCC | 1 cut(s) | 409 |
| DpnI | GATC | 1 cut(s) | 179 |
| DpnII | GATC | 1 cut(s) | 177 |
| EaeI | YGGCCR | 2 cut(s) | 3, 378 |
| Eam1104I | CTCTTC | 1 cut(s) | 333 |
| EarI | CTCTTC | 1 cut(s) | 333 |
| Eco88I | CYCGRG | 1 cut(s) | 184 |
| EcoRII | CCWGG | 1 cut(s) | 197 |
| EgeI | GGCGCC | 1 cut(s) | 409 |
| EheI | GGCGCC | 1 cut(s) | 409 |
| FaiI | YATR | 3 cut(s) | 83, 281, 351 |
| FblI | GTMKAC | 1 cut(s) | 114 |
| Fnu4HI | GCNGC | 8 cut(s) | 131, 227, 397, 400, 411, 424, 433, 436 |
| FokI | GGATG | 1 cut(s) | 214 |
| Fsp4HI | GCNGC | 8 cut(s) | 131, 227, 397, 400, 411, 424, 433, 436 |
| FspBI | CTAG | 4 cut(s) | 69, 134, 323, 439 |
| GlaI | GCGC | 1 cut(s) | 409 |
| GluI | GCNGC | 8 cut(s) | 131, 227, 397, 400, 411, 424, 433, 436 |
| HaeII | RGCGCY | 1 cut(s) | 411 |
| HaeIII | GGCC | 3 cut(s) | 5, 215, 380 |
| HapII | CCGG | 2 cut(s) | 159, 355 |
| HhaI | GCGC | 1 cut(s) | 410 |
| Hin1I | GRCGYC | 2 cut(s) | 236, 408 |
| Hin6I | GCGC | 1 cut(s) | 408 |
| HinP1I | GCGC | 1 cut(s) | 408 |
| HincII | GTYRAC | 1 cut(s) | 115 |
| HindII | GTYRAC | 1 cut(s) | 115 |
| HindIII | AAGCTT | 1 cut(s) | 312 |
| HinfI | GANTC | 1 cut(s) | 262 |
| HpaII | CCGG | 2 cut(s) | 159, 355 |
| Hpy166II | GTNNAC | 1 cut(s) | 115 |
| Hpy188I | TCNGA | 4 cut(s) | 28, 150, 241, 253 |
| Hpy8I | GTNNAC | 1 cut(s) | 115 |
| Hpy99I | CGWCG | 3 cut(s) | 46, 116, 172 |
| HpyAV | CCTTC | 2 cut(s) | 24, 155 |
| HpyCH4III | ACNGT | 1 cut(s) | 418 |
| HpyCH4IV | ACGT | 5 cut(s) | 44, 48, 111, 236, 268 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 311, 405, 429, 432 |
| HpySE526I | ACGT | 5 cut(s) | 44, 48, 111, 236, 268 |
| Hsp92I | GRCGYC | 2 cut(s) | 236, 408 |
| HspAI | GCGC | 1 cut(s) | 408 |
| KasI | GGCGCC | 1 cut(s) | 407 |
| Kzo9I | GATC | 1 cut(s) | 177 |
| LguI | GCTCTTC | 1 cut(s) | 333 |
| LmnI | GCTCC | 1 cut(s) | 125 |
| LpnPI | CCDG | 7 cut(s) | 86, 172, 184, 211, 269, 312, 368 |
| Lsp1109I | GCAGC | 1 cut(s) | 408 |
| LweI | GCATC | 2 cut(s) | 66, 292 |
| MaeI | CTAG | 4 cut(s) | 69, 134, 323, 439 |
| MaeII | ACGT | 5 cut(s) | 44, 48, 111, 236, 268 |
| MaeIII | GTNAC | 1 cut(s) | 274 |
| MalI | GATC | 1 cut(s) | 179 |
| MboI | GATC | 1 cut(s) | 177 |
| MboII | GAAGA | 1 cut(s) | 320 |
| MlsI | TGGCCA | 2 cut(s) | 5, 380 |
| MluCI | AATT | 2 cut(s) | 218, 369 |
| MluNI | TGGCCA | 2 cut(s) | 5, 380 |
| Mly113I | GGCGCC | 1 cut(s) | 408 |
| MmeI | TCCRAC | 1 cut(s) | 51 |
| MnlI | CCTC | 4 cut(s) | 34, 113, 184, 205 |
| Mox20I | TGGCCA | 2 cut(s) | 5, 380 |
| MscI | TGGCCA | 2 cut(s) | 5, 380 |
| MseI | TTAA | 1 cut(s) | 222 |
| Msp20I | TGGCCA | 2 cut(s) | 5, 380 |
| MspA1I | CMGCKG | 1 cut(s) | 399 |
| MspI | CCGG | 2 cut(s) | 159, 355 |
| MspR9I | CCNGG | 1 cut(s) | 199 |
| MvaI | CCWGG | 1 cut(s) | 199 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 311, 405, 429, 432 |
| NarI | GGCGCC | 1 cut(s) | 408 |
| NdeII | GATC | 1 cut(s) | 177 |
| NheI | GCTAGC | 1 cut(s) | 322 |
| NlaIV | GGNNCC | 1 cut(s) | 409 |
| NmeAIII | GCCGAG | 1 cut(s) | 84 |
| PaeR7I | CTCGAG | 1 cut(s) | 184 |
| PciSI | GCTCTTC | 1 cut(s) | 333 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 111, 182 |
| PfeI | GAWTC | 1 cut(s) | 262 |
| Pfl23II | CGTACG | 1 cut(s) | 45 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 373 |
| PinAI | ACCGGT | 1 cut(s) | 354 |
| PkrI | GCNGC | 8 cut(s) | 132, 228, 398, 401, 412, 425, 434, 437 |
| PluTI | GGCGCC | 1 cut(s) | 411 |
| Psp6I | CCWGG | 1 cut(s) | 197 |
| PspGI | CCWGG | 1 cut(s) | 197 |
| PspLI | CGTACG | 1 cut(s) | 45 |
| PspN4I | GGNNCC | 1 cut(s) | 409 |
| PspXI | VCTCGAGB | 1 cut(s) | 184 |
| RsaI | GTAC | 2 cut(s) | 47, 209 |
| RsaNI | GTAC | 2 cut(s) | 46, 208 |
| SalI | GTCGAC | 1 cut(s) | 113 |
| SapI | GCTCTTC | 1 cut(s) | 333 |
| SaqAI | TTAA | 1 cut(s) | 222 |
| SatI | GCNGC | 8 cut(s) | 131, 227, 397, 400, 411, 424, 433, 436 |
| Sau3AI | GATC | 1 cut(s) | 177 |
| ScrFI | CCNGG | 1 cut(s) | 199 |
| SfaNI | GCATC | 2 cut(s) | 66, 292 |
| SfoI | GGCGCC | 1 cut(s) | 409 |
| Sfr274I | CTCGAG | 1 cut(s) | 184 |
| SlaI | CTCGAG | 1 cut(s) | 184 |
| SmlI | CTYRAG | 1 cut(s) | 184 |
| SmoI | CTYRAG | 1 cut(s) | 184 |
| Sse9I | AATT | 2 cut(s) | 218, 369 |
| SsiI | CCGC | 9 cut(s) | 131, 227, 399, 402, 411, 423, 426, 432, 435 |
| SspDI | GGCGCC | 1 cut(s) | 407 |
| SspMI | CTAG | 4 cut(s) | 69, 134, 323, 439 |
| StyD4I | CCNGG | 1 cut(s) | 197 |
| TaaI | ACNGT | 1 cut(s) | 418 |
| TaiI | ACGT | 5 cut(s) | 47, 51, 114, 239, 271 |
| TaqI | TCGA | 3 cut(s) | 114, 176, 185 |
| TasI | AATT | 2 cut(s) | 218, 369 |
| TauI | GCSGC | 7 cut(s) | 133, 229, 402, 413, 426, 435, 438 |
| TfiI | GAWTC | 1 cut(s) | 262 |
| Tru1I | TTAA | 1 cut(s) | 222 |
| Tru9I | TTAA | 1 cut(s) | 222 |
| TscAI | CASTG | 2 cut(s) | 24, 421 |
| TseI | GCWGC | 1 cut(s) | 396 |
| TspRI | CASTG | 2 cut(s) | 24, 421 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 373 |
| XapI | RAATTY | 2 cut(s) | 218, 369 |
| XhoI | CTCGAG | 1 cut(s) | 184 |
| XmiI | GTMKAC | 1 cut(s) | 114 |
| XspI | CTAG | 4 cut(s) | 69, 134, 323, 439 |
| ZraI | GACGTC | 1 cut(s) | 237 |