gag-polypeptide of LTR copia-type
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 230 |
| AciI | CCGC | 2 cut(s) | 185, 228 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 26 |
| AgsI | TTSAA | 1 cut(s) | 142 |
| AluBI | AGCT | 1 cut(s) | 146 |
| AluI | AGCT | 1 cut(s) | 146 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| Ama87I | CYCGRG | 1 cut(s) | 238 |
| AoxI | GGCC | 1 cut(s) | 3 |
| AspA2I | CCTAGG | 1 cut(s) | 157 |
| AsuHPI | GGTGA | 2 cut(s) | 61, 100 |
| AvaI | CYCGRG | 1 cut(s) | 238 |
| AvrII | CCTAGG | 1 cut(s) | 157 |
| BccI | CCATC | 3 cut(s) | 74, 119, 185 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BfaI | CTAG | 2 cut(s) | 158, 247 |
| BisI | GCNGC | 2 cut(s) | 185, 228 |
| BlnI | CCTAGG | 1 cut(s) | 157 |
| BlsI | GCNGC | 2 cut(s) | 186, 229 |
| BmeT110I | CYCGRG | 1 cut(s) | 238 |
| BsaJI | CCNNGG | 1 cut(s) | 157 |
| BsaWI | WCCGGW | 1 cut(s) | 212 |
| BsaXI | ACNNNNNCTCC | 1 cut(s) | 31 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 26 |
| BseDI | CCNNGG | 1 cut(s) | 157 |
| BseGI | GGATG | 1 cut(s) | 98 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 26 |
| Bsh1236I | CGCG | 1 cut(s) | 230 |
| BshFI | GGCC | 1 cut(s) | 5 |
| BsiHKCI | CYCGRG | 1 cut(s) | 238 |
| BsiSI | CCGG | 3 cut(s) | 27, 188, 213 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 26 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| BsmBI | CGTCTC | 1 cut(s) | 21 |
| BsnI | GGCC | 1 cut(s) | 5 |
| BsoBI | CYCGRG | 1 cut(s) | 238 |
| Bsp143I | GATC | 1 cut(s) | 231 |
| BspACI | CCGC | 2 cut(s) | 185, 228 |
| BspANI | GGCC | 1 cut(s) | 5 |
| BspFNI | CGCG | 1 cut(s) | 230 |
| BssECI | CCNNGG | 1 cut(s) | 157 |
| BssMI | GATC | 1 cut(s) | 231 |
| BssT1I | CCWWGG | 1 cut(s) | 157 |
| BstF5I | GGATG | 1 cut(s) | 98 |
| BstFNI | CGCG | 1 cut(s) | 230 |
| BstKTI | GATC | 1 cut(s) | 234 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstMBI | GATC | 1 cut(s) | 231 |
| BstUI | CGCG | 1 cut(s) | 230 |
| BsuRI | GGCC | 1 cut(s) | 5 |
| BtsCI | GGATG | 1 cut(s) | 98 |
| CviJI | RGCY | 6 cut(s) | 5, 30, 146, 162, 227, 237 |
| CviKI_1 | RGCY | 6 cut(s) | 5, 30, 146, 162, 227, 237 |
| DpnI | GATC | 1 cut(s) | 233 |
| DpnII | GATC | 1 cut(s) | 231 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eco130I | CCWWGG | 1 cut(s) | 157 |
| Eco88I | CYCGRG | 1 cut(s) | 238 |
| EcoT14I | CCWWGG | 1 cut(s) | 157 |
| ErhI | CCWWGG | 1 cut(s) | 157 |
| Esp3I | CGTCTC | 1 cut(s) | 21 |
| FaiI | YATR | 4 cut(s) | 60, 80, 86, 137 |
| Fnu4HI | GCNGC | 2 cut(s) | 185, 228 |
| FokI | GGATG | 1 cut(s) | 85 |
| Fsp4HI | GCNGC | 2 cut(s) | 185, 228 |
| FspBI | CTAG | 2 cut(s) | 158, 247 |
| GluI | GCNGC | 2 cut(s) | 185, 228 |
| HaeIII | GGCC | 1 cut(s) | 5 |
| HapII | CCGG | 3 cut(s) | 27, 188, 213 |
| HincII | GTYRAC | 1 cut(s) | 169 |
| HindII | GTYRAC | 1 cut(s) | 169 |
| HindIII | AAGCTT | 1 cut(s) | 144 |
| HinfI | GANTC | 2 cut(s) | 90, 95 |
| HpaII | CCGG | 3 cut(s) | 27, 188, 213 |
| HphI | GGTGA | 2 cut(s) | 61, 100 |
| Hpy166II | GTNNAC | 1 cut(s) | 169 |
| Hpy188I | TCNGA | 2 cut(s) | 21, 126 |
| Hpy188III | TCNNGA | 1 cut(s) | 115 |
| Hpy8I | GTNNAC | 1 cut(s) | 169 |
| HpyCH4IV | ACGT | 1 cut(s) | 165 |
| HpySE526I | ACGT | 1 cut(s) | 165 |
| Kzo9I | GATC | 1 cut(s) | 231 |
| LpnPI | CCDG | 5 cut(s) | 40, 60, 100, 201, 226 |
| MaeI | CTAG | 2 cut(s) | 158, 247 |
| MaeII | ACGT | 1 cut(s) | 165 |
| MaeIII | GTNAC | 1 cut(s) | 7 |
| MalI | GATC | 1 cut(s) | 233 |
| MboI | GATC | 1 cut(s) | 231 |
| MlyI | GAGTC | 2 cut(s) | 84, 89 |
| MmeI | TCCRAC | 2 cut(s) | 44, 126 |
| MnlI | CCTC | 3 cut(s) | 34, 73, 209 |
| MspI | CCGG | 3 cut(s) | 27, 188, 213 |
| MvnI | CGCG | 1 cut(s) | 230 |
| NdeII | GATC | 1 cut(s) | 231 |
| NmuCI | GTSAC | 1 cut(s) | 7 |
| PkrI | GCNGC | 2 cut(s) | 186, 229 |
| PleI | GAGTC | 2 cut(s) | 84, 89 |
| PpsI | GAGTC | 2 cut(s) | 84, 89 |
| SatI | GCNGC | 2 cut(s) | 185, 228 |
| Sau3AI | GATC | 1 cut(s) | 231 |
| SchI | GAGTC | 2 cut(s) | 84, 89 |
| SetI | ASST | 3 cut(s) | 26, 148, 168 |
| SsiI | CCGC | 2 cut(s) | 185, 228 |
| SspMI | CTAG | 2 cut(s) | 158, 247 |
| StyI | CCWWGG | 1 cut(s) | 157 |
| TaiI | ACGT | 1 cut(s) | 168 |
| TaqI | TCGA | 1 cut(s) | 93 |
| TauI | GCSGC | 2 cut(s) | 187, 230 |
| TseFI | GTSAC | 1 cut(s) | 7 |
| Tsp45I | GTSAC | 1 cut(s) | 7 |
| XmaJI | CCTAGG | 1 cut(s) | 157 |
| XspI | CTAG | 2 cut(s) | 158, 247 |