RPAP1-like, N-terminal
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 172 |
| AclWI | GGATC | 3 cut(s) | 279, 472, 485 |
| AcsI | RAATTY | 3 cut(s) | 35, 238, 428 |
| AgsI | TTSAA | 3 cut(s) | 236, 283, 345 |
| AjnI | CCWGG | 1 cut(s) | 184 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 216, 248 |
| AluBI | AGCT | 1 cut(s) | 206 |
| AluI | AGCT | 1 cut(s) | 206 |
| AlwI | GGATC | 3 cut(s) | 279, 472, 485 |
| AoxI | GGCC | 1 cut(s) | 168 |
| ApoI | RAATTY | 3 cut(s) | 35, 238, 428 |
| AspS9I | GGNCC | 2 cut(s) | 169, 392 |
| AvaII | GGWCC | 1 cut(s) | 392 |
| BamHI | GGATCC | 1 cut(s) | 477 |
| BbsI | GAAGAC | 1 cut(s) | 150 |
| BccI | CCATC | 1 cut(s) | 443 |
| BciT130I | CCWGG | 1 cut(s) | 186 |
| BclI | TGATCA | 1 cut(s) | 444 |
| Bme1390I | CCNGG | 1 cut(s) | 186 |
| Bme18I | GGWCC | 1 cut(s) | 392 |
| BmgT120I | GGNCC | 2 cut(s) | 169, 392 |
| BmiI | GGNNCC | 2 cut(s) | 76, 479 |
| BmrFI | CCNGG | 1 cut(s) | 186 |
| BmsI | GCATC | 2 cut(s) | 158, 224 |
| BpiI | GAAGAC | 1 cut(s) | 150 |
| BpuEI | CTTGAG | 1 cut(s) | 204 |
| Bse1I | ACTGG | 1 cut(s) | 11 |
| Bse3DI | GCAATG | 1 cut(s) | 468 |
| BseBI | CCWGG | 1 cut(s) | 186 |
| BseGI | GGATG | 1 cut(s) | 403 |
| BseMI | GCAATG | 1 cut(s) | 468 |
| BseMII | CTCAG | 1 cut(s) | 370 |
| BseNI | ACTGG | 1 cut(s) | 11 |
| BshFI | GGCC | 1 cut(s) | 170 |
| BsnI | GGCC | 1 cut(s) | 170 |
| Bsp143I | GATC | 3 cut(s) | 271, 444, 477 |
| BspACI | CCGC | 1 cut(s) | 172 |
| BspANI | GGCC | 1 cut(s) | 170 |
| BspCNI | CTCAG | 1 cut(s) | 369 |
| BspLI | GGNNCC | 2 cut(s) | 76, 479 |
| BspPI | GGATC | 3 cut(s) | 279, 472, 485 |
| BsrDI | GCAATG | 1 cut(s) | 468 |
| BsrI | ACTGG | 1 cut(s) | 11 |
| BssMI | GATC | 3 cut(s) | 271, 444, 477 |
| Bst2UI | CCWGG | 1 cut(s) | 186 |
| Bst4CI | ACNGT | 1 cut(s) | 463 |
| BstC8I | GCNNGC | 2 cut(s) | 140, 172 |
| BstDEI | CTNAG | 1 cut(s) | 356 |
| BstF5I | GGATG | 1 cut(s) | 403 |
| BstKTI | GATC | 3 cut(s) | 274, 447, 480 |
| BstMBI | GATC | 3 cut(s) | 271, 444, 477 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 212 |
| BstNI | CCWGG | 1 cut(s) | 186 |
| BstSCI | CCNGG | 1 cut(s) | 184 |
| BstV2I | GAAGAC | 1 cut(s) | 150 |
| BstX2I | RGATCY | 1 cut(s) | 477 |
| BstYI | RGATCY | 1 cut(s) | 477 |
| BsuRI | GGCC | 1 cut(s) | 170 |
| BtsCI | GGATG | 1 cut(s) | 403 |
| Cac8I | GCNNGC | 2 cut(s) | 140, 172 |
| Cfr13I | GGNCC | 2 cut(s) | 169, 392 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 67, 102 |
| CviAII | CATG | 5 cut(s) | 20, 98, 263, 311, 474 |
| CviJI | RGCY | 4 cut(s) | 24, 75, 170, 206 |
| CviKI_1 | RGCY | 4 cut(s) | 24, 75, 170, 206 |
| DdeI | CTNAG | 1 cut(s) | 356 |
| DpnI | GATC | 3 cut(s) | 273, 446, 479 |
| DpnII | GATC | 3 cut(s) | 271, 444, 477 |
| Eco47I | GGWCC | 1 cut(s) | 392 |
| EcoRII | CCWGG | 1 cut(s) | 184 |
| FaeI | CATG | 5 cut(s) | 23, 101, 266, 314, 477 |
| FaiI | YATR | 9 cut(s) | 21, 99, 228, 247, 264, 312, 456, 458, 475 |
| FatI | CATG | 5 cut(s) | 19, 97, 262, 310, 473 |
| FauI | CCCGC | 1 cut(s) | 179 |
| FauNDI | CATATG | 1 cut(s) | 456 |
| FbaI | TGATCA | 1 cut(s) | 444 |
| FokI | GGATG | 1 cut(s) | 390 |
| HaeIII | GGCC | 1 cut(s) | 170 |
| Hin1II | CATG | 5 cut(s) | 23, 101, 266, 314, 477 |
| HinfI | GANTC | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 2 cut(s) | 52, 104 |
| Hpy188III | TCNNGA | 1 cut(s) | 448 |
| Hpy8I | GTNNAC | 2 cut(s) | 52, 104 |
| HpyAV | CCTTC | 1 cut(s) | 360 |
| HpyCH4III | ACNGT | 1 cut(s) | 463 |
| HpyCH4V | TGCA | 3 cut(s) | 149, 215, 473 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 212 |
| HpyF3I | CTNAG | 1 cut(s) | 356 |
| Hsp92II | CATG | 5 cut(s) | 23, 101, 266, 314, 477 |
| Ksp22I | TGATCA | 1 cut(s) | 444 |
| Kzo9I | GATC | 3 cut(s) | 271, 444, 477 |
| LmnI | GCTCC | 1 cut(s) | 80 |
| LpnPI | CCDG | 8 cut(s) | 24, 152, 171, 198, 216, 343, 423, 455 |
| LweI | GCATC | 2 cut(s) | 158, 224 |
| MaeIII | GTNAC | 2 cut(s) | 93, 373 |
| MalI | GATC | 3 cut(s) | 273, 446, 479 |
| MboI | GATC | 3 cut(s) | 271, 444, 477 |
| MboII | GAAGA | 3 cut(s) | 8, 150, 185 |
| MfeI | CAATTG | 2 cut(s) | 84, 505 |
| MflI | RGATCY | 1 cut(s) | 477 |
| MlyI | GAGTC | 1 cut(s) | 35 |
| MmeI | TCCRAC | 1 cut(s) | 148 |
| MnlI | CCTC | 5 cut(s) | 39, 207, 281, 476, 491 |
| MseI | TTAA | 1 cut(s) | 111 |
| MslI | CAYNNNNRTG | 1 cut(s) | 488 |
| MspR9I | CCNGG | 1 cut(s) | 186 |
| MunI | CAATTG | 2 cut(s) | 84, 505 |
| MvaI | CCWGG | 1 cut(s) | 186 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 212 |
| NdeI | CATATG | 1 cut(s) | 456 |
| NdeII | GATC | 3 cut(s) | 271, 444, 477 |
| NlaIII | CATG | 5 cut(s) | 23, 101, 266, 314, 477 |
| NlaIV | GGNNCC | 2 cut(s) | 76, 479 |
| PleI | GAGTC | 1 cut(s) | 35 |
| PpsI | GAGTC | 1 cut(s) | 35 |
| Psp6I | CCWGG | 1 cut(s) | 184 |
| PspGI | CCWGG | 1 cut(s) | 184 |
| PspN4I | GGNNCC | 2 cut(s) | 76, 479 |
| PspPI | GGNCC | 2 cut(s) | 169, 392 |
| PsuI | RGATCY | 1 cut(s) | 477 |
| RseI | CAYNNNNRTG | 1 cut(s) | 488 |
| SaqAI | TTAA | 1 cut(s) | 111 |
| Sau3AI | GATC | 3 cut(s) | 271, 444, 477 |
| Sau96I | GGNCC | 2 cut(s) | 169, 392 |
| SchI | GAGTC | 1 cut(s) | 35 |
| ScrFI | CCNGG | 1 cut(s) | 186 |
| SetI | ASST | 5 cut(s) | 31, 208, 280, 352, 444 |
| SfaNI | GCATC | 2 cut(s) | 158, 224 |
| SinI | GGWCC | 1 cut(s) | 392 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 488 |
| SmlI | CTYRAG | 1 cut(s) | 219 |
| SmoI | CTYRAG | 1 cut(s) | 219 |
| SsiI | CCGC | 1 cut(s) | 172 |
| StyD4I | CCNGG | 1 cut(s) | 184 |
| TaaI | ACNGT | 1 cut(s) | 463 |
| TaqI | TCGA | 2 cut(s) | 274, 286 |
| Tru1I | TTAA | 1 cut(s) | 111 |
| Tru9I | TTAA | 1 cut(s) | 111 |
| TspDTI | ATGAA | 4 cut(s) | 8, 56, 198, 231 |
| VpaK11BI | GGWCC | 1 cut(s) | 392 |
| XapI | RAATTY | 3 cut(s) | 35, 238, 428 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 308 |