FvH4_7g19191

Mitochondrial protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000034
Physical Location & Seq
Reverse (-)
15901364 .. 15905776
4413 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g19191.t1

Sequence Viewer

Length: 3366 bp
ATGGCTTCCTCTTCTATCAACCAAAACACCTCTTCTTTTCCCAAACTCACTGAATCCAACTATTTAGTTTGGATTGTCCCCATCCAGTCCTATCTCAATGGTGTTGATCTATGGGGCTATGTTGATGGCTCCATTCCGGCACCAGATCGCACAGTCGATGTTCCAGCCAGTGGCACTACTCCGGCATCCACCCAACCCAATCCGGCGTATAAAGCCTGGTATGTTGAAGATCAGAAGATTGTTAGTATTCTCACTACCTCTCTCACCGAACCCGTTGCTCGGATCTGCCTTGGAGAGACAACATCCAAAGGAATTTGGGACTGTCTCGCTAATTTCTTCAACCAAAAATCTGCTGCCAATGCCACAAACTTGAAACTTCAACTGTATGAGCTTCAAAAAGGGACCCAATCTGTTGATGCTTACCTGCAACATGCCAAGTCGATTGCTGATGCTCTTGCCTCCATTAATCAGCCCGTCTCTGACGCCGACTTGGTAATTGCTACTCTCCATGGTCTTGGTTCTGATTATCTAATGCTTCGCACTGCCTTGTCACAGACTACTCTCCCTAGCTTCTCTGATCTTCGTGCCCGGATCTTGGCCTTTGAGGCGCAGCAACCACCGTCGGCTACTTTACCAACCGCCACTGCTCTTTTCAACAACGGTGGTTCAACCTCCAATCGATCTGGTCGCCGCCCGTATGCTGGTAATGGTGGTGCTGGCCGTAATTCTGGCAAAAATCGCCAAAACAATGGAACTAATGGGCAAACCTCTTTTCGTTATGGCACTTCTTCTCAACAGGCCTATCAACCTCAATTCCAACCTAATCCTTGGGCCCAGTCGCAGTTCAGGCCTGCCTCCCAACCAGGCCTTCTTGGACCTGCTCCAGGTCAATCCTGGTGTCCCACATGCATGTCCTCTCTTCATGGGCCTACTCAATGCCCTCATCGGTTTCCAGGCCCTCATTCAGTTCGACCATTTGCCGGTGCTCATTTTGCTCAACCCGATGATCCCTTTTGGTACCCTGATACTGGTGCTACTCACCACATGACTTCTATGCCGGTTTACAATCCTCAAACTTATGGAGGTCCCCACAATGTCTATATGGGTAACGGTGACTCTATGCCTGTTTCTCATACGGGTACTTTACCCCTATCTTTGGGGGATTCCAACTTTTCTCTAACTAATGTCTTCCAAATTCCTTCTATTCGCAAAAATCTTTTGTCCGTACAATCTCCAGGAACTCTTGAGTTTGTGCAACTCACCTCCCCTATTTCGGCCCAATCCTCCAGGCCCAGTCCACCTCTCCCTCAGCCCAATCCTTCCCCTACCCCTACAGCCTCTCTTACCGAAACCACCTATGCTGGTTCCTCCCCTCTTCTCACCCAAACACAGACCACTCCTCCCCCACCACCAGAAACCACAGCTCCCACACCCCCACCGCTCCCTGCCCCGCCCTCCTTGCGCGTCTACCGGCGCCGCGCCACCAACCTGCCACCACCTCCCTCTAATCCCTGTTCATCTCCCTTTGAAATTCCGGAGTCAAATCTGCCTGATCCGGCTGCTCCGCCTGCCTCCGTCGCATCCATATCCGATCCGGCCGACTCCACCGAACCGGCAGCGCCACCACTGCTGGCGCACCCACCAGACGCACAACCATCTGCTCCTGTCATCTCCAATCACATCCAAACCCGCTCTCGTTCCGGCATCTCCAAACCAAGAACTCTCACTGATGGAACTGTCAGGTATCCGGTTTCTCGAGCTCTTCTATCTGTCATTGATGATATGGAACCCACTTGTTATACTCAGGCATCTCAATCCAAGGAATGGCGTTTGGCTATGGCTGAAGAAATCAACGCCCTCTTGAAGAATCAAACCTGGTCCCTTGTTCCCCCATCTCCTTCACAAAATACAGTTGGCTGCAAGTGGGTTTTCCGGATTAAACGACTCCCTGATGGTACCGTGGATCGATATAAAGCTCGACTTGTTGCCAAGGGATTCCATCAGCGTCAAGGCATCGATTATCACGAAACCTTCAGTCCAGTCATTAAACCGGCCACAATTCGTACAGTCCTTGCCATTGCGATCTCTCGCGGGTGGAAGCTTCGCCAACTTGATGTCAAAAATGCCTTTCTCAATGGTTTTCTTGCTGAAGACGTGTTCATGACTCAGCCCCCTGGCTTTGTTGATCCTGGTCATCCAACACATGTTTGCAAGCTTCACAAGTCCCTCTATGGACTCAAACAAGCTCCTCGTGCCTGGTTCCATCGAATCAGTGGTTTTCTTCTCTCTGCAGGCTTTCACCAAAGTAAAGCCGATCACTCTTTATTTCTCTTTCACTACGGGTCTCACACCATATACCTCCTGTTATACGTCGATGACATTATTGTGACTGGTAGTAGTGATGGAATTGTTGAGAGCTTTATTCGAGCTATTGGTCGCGGCTTTGATATAACAGATATGGGGTCTCTACATTATTTTCTTGGTTTACAGGTCTCTTCATCTCCAGCTGGCCTTCACATTCACCAACTTAAGTATGCTCATGACATACTTAAGAAGCATGACCTTCTCCTCAGCCAACCTATGAGCACTCCGTTAGCAGCCAAGCCAATTCTAACAGCAACCGACGGTGATCTCCTTGACAATCCAACAGTTTTTCGTGAACTTGTTGGGTCCCTTCAGTATCTCACGATCACGCGTCCGGATATAAGCTTCGCTGTGAACTCAGTTGCTCAGTTCATGAGTCAGCCACGTACCTCTCATCTAATAGCAGCCAAGCGCATTCTCCGCTATGTCAAAGGAACTCTTGACCATGGTCTTTTCTTTAGTCCTCAACGCCAACCTGTTCTCCTCTCTGCTTACTCGGACGCTGATTGGGCCGGCTGCCCTGACTCACGCCGCTCCACCACAGGCTATCTTGTGTACCTTGGCTCTAATCTCATTTCCTGGTGCTCCAAGAAACAGCCTACAGTGGCTCGCTCTAGTGCTGAAGCCGAATATCGCTCTCTAGCTCATGCCTCTGCTGAAACTACCTGGTTAGGCTATCTCCTCTTTGAACTTGGTGTCCGCATAAATCTTCCCATTATGCTTCATTGTGACAACCTCAGTGCTACGTACATGGCCTCCAACCCAGTCTTTCATTCCCGTACCAAACACATTGAGCTCGACTATCATTTTGTTCGCGAAAAAGTGGCCCTTGGCAGTCATCGTGTTTGTTACATTCCTTCAGTTGATCAGCCTGCTGACCTCCTAACCAAACCCCTGCATAAACACCGGCATAACACCTTGTGTCTCAAACTTGTCCGCCCACGGCCGCCATGTTTGCGGGGGGGTATTGGAGCACATTCACAGCCTCAATTAAGAGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
RVT_2 Retrotran_gag_2 Retrotran_gag_3

Protein Analysis

1122

Amino Acids

122.38

Weight (kDa)

9.07

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Retrotran_gag_2 PF14223 29 - 204 1.4e-17 gag-polypeptide of LTR copia-type
Pol_BBD PF22936 339 - 410 1.6e-10 Pol polyprotein, beta-barrel domain
RVT_2 PF07727 623 - 865 5.7e-66 Reverse transcriptase (RNA-dependent DNA polymerase)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000034)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G34070
fragaria_vesca FvH4_1g00961 FvH4_1g10351 FvH4_1g15351 FvH4_1g26571 FvH4_1g26621 FvH4_1g28434 FvH4_2g00591 FvH4_2g06411 FvH4_2g16831 FvH4_2g20161 FvH4_2g23291 FvH4_3g04191 FvH4_3g07021 FvH4_3g17162 FvH4_3g17262 FvH4_3g38081 FvH4_3g39581 FvH4_3g45090 FvH4_4g05782 FvH4_4g05872 FvH4_4g13041 FvH4_4g23411 FvH4_4g24051 FvH4_4g26452 FvH4_4g26453 FvH4_4g27903 FvH4_4g33449 FvH4_5g01072 FvH4_5g03532 FvH4_5g04140 FvH4_5g06631 FvH4_5g09401 FvH4_5g09403 FvH4_5g20624 FvH4_5g20701 FvH4_5g21971 FvH4_5g36481 FvH4_5g38691 FvH4_6g11492 FvH4_6g19792 FvH4_6g20601 FvH4_6g24641 FvH4_6g34291 FvH4_6g36662 FvH4_6g36681 FvH4_6g36682 FvH4_6g36682 FvH4_6g36682 FvH4_6g36770 FvH4_6g36981 FvH4_6g37021 FvH4_6g37022 FvH4_6g43610 FvH4_7g10872 FvH4_7g10872 FvH4_7g16100 FvH4_7g19191 FvH4_7g23761 FvH4_7g24921
malus_domestica MD01G1077600.v1.1 MD02G1010600.v1.1 MD03G1059500.v1.1 MD04G1024600.v1.1 MD04G1101800.v1.1 MD04G1151700.v1.1 MD05G1025000.v1.1 MD05G1129300.v1.1 MD05G1320000.v1.1 MD06G1136100.v1.1 MD08G1157400.v1.1 MD09G1041800.v1.1 MD10G1109600.v1.1 MD10G1255600.v1.1 MD11G1108900.v1.1 MD11G1145100.v1.1 MD11G1242500.v1.1 MD12G1113300.v1.1 MD12G1231800.v1.1 MD13G1099200.v1.1 MD13G1142500.v1.1 MD15G1114200.v1.1 MD15G1119400.v1.1 MD15G1372100.v1.1 MD16G1038200.v1.1 MD16G1163700.v1.1 MD17G1055600.v1.1 MD17G1089000.v1.1 MD17G1109500.v1.1
prunus_persica Prupe.1G091500_v2.0.a1 Prupe.1G170400_v2.0.a1 Prupe.2G074700_v2.0.a1 Prupe.3G024500_v2.0.a1 Prupe.3G026300_v2.0.a1 Prupe.3G245500_v2.0.a1 Prupe.4G199600_v2.0.a1 Prupe.4G230800_v2.0.a1 Prupe.4G238700_v2.0.a1 Prupe.6G052200_v2.0.a1 Prupe.8G080900_v2.0.a1 Prupe.8G084200_v2.0.a1 Prupe.8G185000_v2.0.a1 Prupe.8G185100_v2.0.a1
pyrus_communis pycom01g07890 pycom01g09690 pycom01g14780 pycom01g18640 pycom03g07210 pycom05g03010 pycom05g11250 pycom05g23340 pycom05g27720 pycom06g05610 pycom06g12180 pycom09g06110 pycom09g08430 pycom10g16550 pycom11g03760 pycom11g24270 pycom12g12290 pycom13g10850 pycom13g18230 pycom13g22260 pycom13g27850 pycom14g17700 pycom15g07910 pycom15g26210 pycom15g26440 pycom15g29540 pycom16g00280 pycom16g18160 pycom17g16360 pycom17g19900
rosa_chinensis RchiOBHm_Chr1g0313671 RchiOBHm_Chr1g0322301 RchiOBHm_Chr1g0334441 RchiOBHm_Chr1g0337651 RchiOBHm_Chr1g0337711 RchiOBHm_Chr1g0339131 RchiOBHm_Chr1g0344491 RchiOBHm_Chr1g0347771 RchiOBHm_Chr1g0349331 RchiOBHm_Chr1g0354241 RchiOBHm_Chr1g0355351 RchiOBHm_Chr1g0376111 RchiOBHm_Chr1g0379881 RchiOBHm_Chr1g0384421 RchiOBHm_Chr2g0101531 RchiOBHm_Chr2g0117741 RchiOBHm_Chr2g0126581 RchiOBHm_Chr2g0129181 RchiOBHm_Chr2g0136201 RchiOBHm_Chr2g0137991 RchiOBHm_Chr2g0156571 RchiOBHm_Chr2g0159441 RchiOBHm_Chr2g0164131 RchiOBHm_Chr2g0174291 RchiOBHm_Chr2g0175161 RchiOBHm_Chr3g0448481 RchiOBHm_Chr3g0450851 RchiOBHm_Chr3g0450861 RchiOBHm_Chr3g0461251 RchiOBHm_Chr3g0463031 RchiOBHm_Chr3g0465981 RchiOBHm_Chr3g0472811 RchiOBHm_Chr3g0472821 RchiOBHm_Chr3g0480521 RchiOBHm_Chr3g0480531 RchiOBHm_Chr3g0482021 RchiOBHm_Chr3g0496771 RchiOBHm_Chr4g0393151 RchiOBHm_Chr4g0407171 RchiOBHm_Chr4g0431731 RchiOBHm_Chr4g0432071 RchiOBHm_Chr4g0436951 RchiOBHm_Chr5g0000711 RchiOBHm_Chr5g0004361 RchiOBHm_Chr5g0012631 RchiOBHm_Chr5g0025271 RchiOBHm_Chr5g0032551 RchiOBHm_Chr5g0038991 RchiOBHm_Chr5g0043811 RchiOBHm_Chr5g0058511 RchiOBHm_Chr5g0077241 RchiOBHm_Chr5g0079981 RchiOBHm_Chr5g0083071 RchiOBHm_Chr6g0256871 RchiOBHm_Chr6g0266721 RchiOBHm_Chr6g0299971 RchiOBHm_Chr6g0304931 RchiOBHm_Chr7g0177331 RchiOBHm_Chr7g0182851 RchiOBHm_Chr7g0190501 RchiOBHm_Chr7g0200091 RchiOBHm_Chr7g0203981 RchiOBHm_Chr7g0206011 RchiOBHm_Chr7g0206111 RchiOBHm_Chr7g0206441 RchiOBHm_Chr7g0220151 RchiOBHm_Chr7g0234441 RchiOBHm_Chr7g0234661 RchiOBHm_Chr7g0238281
rosa_laevigata RLG00000003338 RLG00000020373 RLG00000020377 RLG00000020415 RLG00000020416 RLG00000026600
rosa_multiflora Rmu_co8214922.1_g000001 Rmu_co8257903.1_g000001 Rmu_co8295123.1_g000001 Rmu_sc0000177.1_g000007 Rmu_sc0000614.1_g000005 Rmu_sc0000648.1_g000003 Rmu_sc0000809.1_g000004 Rmu_sc0001044.1_g000022 Rmu_sc0001211.1_g000100 Rmu_sc0001306.1_g000013 Rmu_sc0001493.1_g000053 Rmu_sc0001605.1_g000001 Rmu_sc0001706.1_g000033 Rmu_sc0001966.1_g000037 Rmu_sc0002080.1_g000051 Rmu_sc0002244.1_g000027 Rmu_sc0002669.1_g000045 Rmu_sc0002806.1_g000013 Rmu_sc0003012.1_g000028 Rmu_sc0003074.1_g000019 Rmu_sc0003180.1_g000020 Rmu_sc0003229.1_g000006 Rmu_sc0003229.1_g000015 Rmu_sc0003267.1_g000017 Rmu_sc0003387.1_g000008 Rmu_sc0004109.1_g000011 Rmu_sc0004483.1_g000021 Rmu_sc0004729.1_g000018 Rmu_sc0005124.1_g000007 Rmu_sc0006187.1_g000007 Rmu_sc0006311.1_g000005 Rmu_sc0006323.1_g000009 Rmu_sc0006619.1_g000003 Rmu_sc0006619.1_g000004 Rmu_sc0007216.1_g000004 Rmu_sc0012033.1_g000003 Rmu_sc0012414.1_g000003 Rmu_sc0013716.1_g000004 Rmu_sc0017020.1_g000002 Rmu_sc0017650.1_g000008 Rmu_sc0022997.1_g000002 Rmu_sc0026059.1_g000001 Rmu_sc0034277.1_g000001 Rmu_sc0038462.1_g000001 Rmu_ssc0000134.1_g000019 Rmu_ssc0000326.1_g000010 Rmu_ssc0000337.1_g000002
rosa_roxburghii Rroxscaffold_153G00436580 Rroxscaffold_1G00005540 Rroxscaffold_1G00007910 Rroxscaffold_1G00020780 Rroxscaffold_1G00024800 Rroxscaffold_1G00028530 Rroxscaffold_1G00035960 Rroxscaffold_1G00060770 Rroxscaffold_1G00063880 Rroxscaffold_1G00072730 Rroxscaffold_2G00090480 Rroxscaffold_2G00098360 Rroxscaffold_2G00098380 Rroxscaffold_2G00098390 Rroxscaffold_2G00098410 Rroxscaffold_2G00098420 Rroxscaffold_2G00099480 Rroxscaffold_2G00122440 Rroxscaffold_2G00130690 Rroxscaffold_2G00132840 Rroxscaffold_3G00259940 Rroxscaffold_3G00262860 Rroxscaffold_3G00262870 Rroxscaffold_3G00262880 Rroxscaffold_3G00262890 Rroxscaffold_4G00296680 Rroxscaffold_4G00315340 Rroxscaffold_5G00341760 Rroxscaffold_5G00350520 Rroxscaffold_5G00365550 Rroxscaffold_5G00367740 Rroxscaffold_5G00375090 Rroxscaffold_5G00377290 Rroxscaffold_6G00400710 Rroxscaffold_6G00402880 Rroxscaffold_6G00418980 Rroxscaffold_6G00419370 Rroxscaffold_6G00430760 Rroxscaffold_7G00161960 Rroxscaffold_7G00166140 Rroxscaffold_7G00175330 Rroxscaffold_7G00206820 Rroxscaffold_7G00212670
rosa_rugosa Rorug01G0429300 Rorug01G0429400 Rorug02G0276300 Rorug02G0362300 Rorug02G0412000 Rorug04G0283500.1 Rorug05G0121800 Rorug05G0138500 Rorug05G0138600 Rorug05G0221000 Rorug05G0556000 Rorug07G0094400 Rorug07G0119200
rosa_samantha Rh1AG022500 Rh1AG214800 Rh1AG295500 Rh1DG290300 Rh2AG469300 Rh2AG469600 Rh2AG469800 Rh2AG470000 Rh2AG472200 Rh2AG472300 Rh2AG472400 Rh2BG358100 Rh2BG456100 Rh2BG481900 Rh2BG482100 Rh2BG482300 Rh2BG482400 Rh2BG484300 Rh2BG484400 Rh2CG255600 Rh2CG455400 Rh2CG455500 Rh2CG455600 Rh2CG455900 Rh2CG456100 Rh2CG458100 Rh2CG458200 Rh2CG458300 Rh2DG466000 Rh2DG490700 Rh2DG490900 Rh2DG491100 Rh2DG491200 Rh2DG493500 Rh2DG493600 Rh4AG091000 Rh4BG347200 Rh4CG082200 Rh4CG099300 Rh5AG230100 Rh5AG230300 Rh5AG302500 Rh5AG302600 Rh5BG214100 Rh5BG231000 Rh5BG231100 Rh5BG310700 Rh5BG543300 Rh5CG238000 Rh5CG259000 Rh5CG259100 Rh5CG566500 Rh5DG027500 Rh5DG218700 Rh5DG236100 Rh5DG236300 Rh6AG285400 Rh6BG286900 Rh6BG376000 Rh6DG235600 Rh6DG280900 Rh6DG368700 Rh6DG423800 Rh7AG106800 Rh7AG226500 Rh7AG227900 Rh7AG228000 Rh7AG229300 Rh7BG097000 Rh7BG121300 Rh7BG129300 Rh7BG130100 Rh7BG222700 Rh7BG225700 Rh7BG225800 Rh7CG111500 Rh7CG131300 Rh7CG131600 Rh7CG131700 Rh7CG132100 Rh7CG132400 Rh7CG132500 Rh7CG132700 Rh7CG132900 Rh7CG221800 Rh7CG242400 Rh7CG242500 Rh7CG243800 Rh7CG244000 Rh7CG365700 Rh7DG109900 Rh7DG110000 Rh7DG129000 Rh7DG130400 Rh7DG236200 Rh7DG236300
rosa_wichuraiana Rw0G001140 Rw0G001660 Rw0G003710 Rw0G003800 Rw0G005640 Rw0G009930 Rw1G005610 Rw1G011690 Rw1G018880 Rw1G026950 Rw1G029360 Rw1G032170 Rw1G035710 Rw2G023950 Rw2G030240 Rw2G038210 Rw2G038490 Rw2G038500 Rw2G054270 Rw3G009830 Rw4G005830 Rw4G006210 Rw4G006690 Rw4G014470 Rw4G015560 Rw4G021550 Rw4G033420 Rw4G034150 Rw5G000890 Rw5G002510 Rw5G002580 Rw5G003440 Rw5G009960 Rw5G024480 Rw5G032910 Rw5G032990 Rw5G035340 Rw5G042620 Rw6G004790 Rw6G012300 Rw6G017050 Rw6G019300 Rw6G026800 Rw6G027320 Rw6G039180 Rw7G010750 Rw7G010920 Rw7G014890 Rw7G016540 Rw7G019730 Rw7G022510 Rw7G023070 Rw7G038740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 432, 886, 1497
Acc65I GGTACC 2 cut(s) 1017, 1955
AccB1I GGYRCC 4 cut(s) 139, 1017, 1473, 1955
AccB7I CCANNNNNTGG 2 cut(s) 170, 1824
AccBSI CCGCTC 3 cut(s) 1441, 1692, 2898
AccI GTMKAC 1 cut(s) 1467
AccII CGCG 6 cut(s) 1464, 1479, 2091, 2439, 2695, 3180
AccIII TCCGGA 3 cut(s) 1534, 1932, 2698
AclWI GGATC 7 cut(s) 290, 599, 1001, 1547, 1586, 1971, 2180
AcoI YGGCCR 4 cut(s) 718, 1596, 2052, 3308
AcsI RAATTY 3 cut(s) 312, 1194, 1530
AcuI CTGAAG 6 cut(s) 1863, 2017, 2169, 2660, 3006, 3207
AcyI GRCGYC 2 cut(s) 483, 1474
AdeI CACNNNGTG 1 cut(s) 3285
AfaI GTAC 9 cut(s) 1019, 1141, 1227, 1957, 2065, 2752, 2921, 3113, 3145
AflII CTTAAG 2 cut(s) 2528, 2549
AflIII ACRYGT 3 cut(s) 2154, 2203, 2693
AjiI CACGTC 1 cut(s) 2155
AjuI GAANNNNNNNTTGG 2 cut(s) 852, 884
AloI GAACNNNNNNTCC 2 cut(s) 3045, 3077
Alw21I GWGCWC 6 cut(s) 988, 1762, 2588, 2951, 3162, 3340
Alw26I GTCTC 7 cut(s) 290, 329, 481, 2349, 2469, 2497, 3293
AlwI GGATC 7 cut(s) 290, 599, 1001, 1547, 1586, 1971, 2180
Ama87I CYCGRG 1 cut(s) 1755
Aor13HI TCCGGA 3 cut(s) 1534, 1932, 2698
ApaI GGGCCC 1 cut(s) 835
ApeKI GCWGC 8 cut(s) 353, 610, 1559, 1616, 1917, 2597, 2768, 2880
ApoI RAATTY 3 cut(s) 312, 1194, 1530
ArsI GACNNNNNNTTYG 2 cut(s) 3155, 3187
AseI ATTAAT 1 cut(s) 465
Asp718I GGTACC 2 cut(s) 1017, 1955
AspLEI GCGC 7 cut(s) 610, 1464, 1476, 1481, 1621, 1636, 2778
AsuC2I CCSGG 1 cut(s) 589
AsuHPI GGTGA 8 cut(s) 256, 1031, 1124, 1252, 1372, 2291, 2513, 2639
AvaI CYCGRG 1 cut(s) 1755
AvaII GGWCC 5 cut(s) 402, 875, 1085, 1878, 2670
BaeGI GKGCMC 2 cut(s) 589, 835
BanI GGYRCC 4 cut(s) 139, 1017, 1473, 1955
BanII GRGCYC 3 cut(s) 835, 1762, 3162
BauI CACGAG 1 cut(s) 2250
BbsI GAAGAC 2 cut(s) 1180, 2157
Bbv12I GWGCWC 6 cut(s) 988, 1762, 2588, 2951, 3162, 3340
BbvCI CCTCAGC 2 cut(s) 1308, 2570
BbvI GCAGC 8 cut(s) 340, 622, 1546, 1628, 1904, 2609, 2780, 2867
BccI CCATC 9 cut(s) 89, 119, 1663, 1724, 1900, 1946, 2007, 2271, 2396
BceAI ACGGC 2 cut(s) 705, 3323
BcgI CGANNNNNNTGC 2 cut(s) 257, 291
BciVI GTATCC 1 cut(s) 1755
BclI TGATCA 1 cut(s) 3229
BcnI CCSGG 1 cut(s) 589
BcoDI GTCTC 7 cut(s) 290, 329, 481, 2349, 2469, 2497, 3293
BfaI CTAG 3 cut(s) 567, 2979, 3005
BfmI CTRYAG 3 cut(s) 1332, 2289, 2964
BfoI RGCGCY 2 cut(s) 1477, 1622
BfrI CTTAAG 2 cut(s) 2528, 2549
BfuAI ACCTGC 3 cut(s) 432, 886, 1497
BfuI GTATCC 1 cut(s) 1755
BglI GCCNNNNNGGC 1 cut(s) 605
Bme18I GGWCC 5 cut(s) 402, 875, 1085, 1878, 2670
BmeT110I CYCGRG 1 cut(s) 1755
BmgBI CACGTC 1 cut(s) 2155
BmrI ACTGGG 3 cut(s) 829, 1287, 3122
BmsI GCATC 7 cut(s) 194, 406, 439, 1589, 1713, 1817, 2022
BmuI ACTGGG 3 cut(s) 829, 1287, 3122
BoxI GACNNNNGTC 1 cut(s) 2811
BpiI GAAGAC 2 cut(s) 1180, 2157
BpmI CTGGAG 4 cut(s) 867, 1218, 1270, 2487
Bpu10I CCTNAGC 2 cut(s) 1308, 2570
BpuEI CTTGAG 1 cut(s) 1265
BpuMI CCSGG 1 cut(s) 589
Bsa29I ATCGAT 3 cut(s) 679, 1966, 2016
BsaAI YACGTR 2 cut(s) 2750, 3111
BsaHI GRCGYC 2 cut(s) 483, 1474
BsaI GGTCTC 3 cut(s) 2349, 2469, 2497
BsaWI WCCGGW 4 cut(s) 1534, 1747, 1932, 2698
BsaXI ACNNNNNCTCC 8 cut(s) 1384, 1408, 1414, 1438, 2829, 2859, 3104, 3134
Bse118I RCCGGY 7 cut(s) 980, 1057, 1470, 1612, 2050, 2876, 3270
Bse1I ACTGG 8 cut(s) 85, 168, 835, 1033, 1293, 2039, 2395, 3128
Bse3DI GCAATG 1 cut(s) 2076
BseAI TCCGGA 3 cut(s) 1534, 1932, 2698
BseCI ATCGAT 3 cut(s) 679, 1966, 2016
BseGI GGATG 6 cut(s) 81, 185, 302, 1580, 1680, 2194
BseMI GCAATG 1 cut(s) 2076
BseMII CTCAG 7 cut(s) 1322, 1817, 2180, 2584, 2736, 2744, 3115
BseNI ACTGG 8 cut(s) 85, 168, 835, 1033, 1293, 2039, 2395, 3128
BseRI GAGGAG 5 cut(s) 1389, 2238, 2558, 2837, 3035
BseSI GKGCMC 2 cut(s) 589, 835
BseX3I CGGCCG 2 cut(s) 1596, 3308
BseXI GCAGC 8 cut(s) 340, 622, 1546, 1628, 1904, 2609, 2780, 2867
Bsh1236I CGCG 6 cut(s) 1464, 1479, 2091, 2439, 2695, 3180
Bsh1285I CGRYCG 2 cut(s) 1599, 3311
BshNI GGYRCC 4 cut(s) 139, 1017, 1473, 1955
BshVI ATCGAT 3 cut(s) 679, 1966, 2016
BsiEI CGRYCG 2 cut(s) 1599, 3311
BsiHKAI GWGCWC 6 cut(s) 988, 1762, 2588, 2951, 3162, 3340
BsiHKCI CYCGRG 1 cut(s) 1755
BslFI GGGAC 8 cut(s) 62, 332, 415, 885, 1071, 1864, 2209, 2656
BsmAI GTCTC 7 cut(s) 290, 329, 481, 2349, 2469, 2497, 3293
BsmBI CGTCTC 1 cut(s) 481
BsmFI GGGAC 8 cut(s) 62, 332, 415, 885, 1071, 1864, 2209, 2656
BsmI GAATGC 1 cut(s) 2778
Bso31I GGTCTC 3 cut(s) 2349, 2469, 2497
BsoBI CYCGRG 1 cut(s) 1755
Bsp120I GGGCCC 1 cut(s) 831
Bsp1286I GDGCHC 8 cut(s) 589, 835, 988, 1762, 2588, 2951, 3162, 3340
Bsp13I TCCGGA 3 cut(s) 1534, 1932, 2698
Bsp19I CCATGG 2 cut(s) 508, 2809
Bsp68I TCGCGA 1 cut(s) 3180
BspCNI CTCAG 7 cut(s) 1321, 1816, 2179, 2583, 2735, 2743, 3114
BspDI ATCGAT 3 cut(s) 679, 1966, 2016
BspEI TCCGGA 3 cut(s) 1534, 1932, 2698
BspFNI CGCG 6 cut(s) 1464, 1479, 2091, 2439, 2695, 3180
BspHI TCATGA 3 cut(s) 2160, 2539, 2736
BspMAI CTGCAG 1 cut(s) 2293
BspMI ACCTGC 3 cut(s) 432, 886, 1497
BspPI GGATC 7 cut(s) 290, 599, 1001, 1547, 1586, 1971, 2180
BspQI GCTCTTC 1 cut(s) 1767
BspT107I GGYRCC 4 cut(s) 139, 1017, 1473, 1955
BspTI CTTAAG 2 cut(s) 2528, 2549
BspTNI GGTCTC 3 cut(s) 2349, 2469, 2497
BsrBI CCGCTC 3 cut(s) 1441, 1692, 2898
BsrDI GCAATG 1 cut(s) 2076
BsrFI RCCGGY 7 cut(s) 980, 1057, 1470, 1612, 2050, 2876, 3270
BsrI ACTGG 8 cut(s) 85, 168, 835, 1033, 1293, 2039, 2395, 3128
BssAI RCCGGY 7 cut(s) 980, 1057, 1470, 1612, 2050, 2876, 3270
BssNI GRCGYC 2 cut(s) 483, 1474
BssSI CACGAG 1 cut(s) 2250
BssT1I CCWWGG 8 cut(s) 289, 508, 827, 1818, 1989, 2809, 2923, 3193
Bst2BI CACGAG 1 cut(s) 2250
Bst6I CTCTTC 6 cut(s) 16, 37, 924, 1380, 1767, 2500
BstACI GRCGYC 2 cut(s) 483, 1474
BstAFI CTTAAG 2 cut(s) 2528, 2549
BstBAI YACGTR 2 cut(s) 2750, 3111
BstDEI CTNAG 7 cut(s) 1308, 1803, 2166, 2570, 2722, 2730, 3101
BstDSI CCRYGG 4 cut(s) 508, 1959, 2809, 3305
BstENI CCTNNNNNAGG 1 cut(s) 882
BstF5I GGATG 6 cut(s) 81, 185, 302, 1580, 1680, 2194
BstFNI CGCG 6 cut(s) 1464, 1479, 2091, 2439, 2695, 3180
BstH2I RGCGCY 2 cut(s) 1477, 1622
BstHHI GCGC 7 cut(s) 610, 1464, 1476, 1481, 1621, 1636, 2778
BstMAI GTCTC 7 cut(s) 290, 329, 481, 2349, 2469, 2497, 3293
BstMCI CGRYCG 2 cut(s) 1599, 3311
BstNSI RCATGY 4 cut(s) 434, 909, 913, 2207
BstPAI GACNNNNGTC 1 cut(s) 2811
BstSFI CTRYAG 3 cut(s) 1332, 2289, 2964
BstSLI GKGCMC 2 cut(s) 589, 835
BstSNI TACGTA 1 cut(s) 3111
BstUI CGCG 6 cut(s) 1464, 1479, 2091, 2439, 2695, 3180
BstV1I GCAGC 8 cut(s) 340, 622, 1546, 1628, 1904, 2609, 2780, 2867
BstV2I GAAGAC 2 cut(s) 1180, 2157
BstX2I RGATCY 2 cut(s) 282, 591
BstXI CCANNNNNNTGG 2 cut(s) 515, 749
BstYI RGATCY 2 cut(s) 282, 591
BstZI CGGCCG 2 cut(s) 1596, 3308
Bsu15I ATCGAT 3 cut(s) 679, 1966, 2016
BsuI GTATCC 1 cut(s) 1755
BsuTUI ATCGAT 3 cut(s) 679, 1966, 2016
BtgI CCRYGG 4 cut(s) 508, 1959, 2809, 3305
BtrI CACGTC 1 cut(s) 2155
BtsCI GGATG 6 cut(s) 81, 185, 302, 1580, 1680, 2194
BtsI GCAGTG 3 cut(s) 540, 642, 1625
BtsIMutI CAGTG 9 cut(s) 48, 175, 540, 642, 1625, 1725, 2278, 2973, 3109
BtuMI TCGCGA 1 cut(s) 3180
BveI ACCTGC 3 cut(s) 432, 886, 1497
CciI TCATGA 3 cut(s) 2160, 2539, 2736
CfoI GCGC 7 cut(s) 610, 1464, 1476, 1481, 1621, 1636, 2778
Cfr10I RCCGGY 7 cut(s) 980, 1057, 1470, 1612, 2050, 2876, 3270
ClaI ATCGAT 3 cut(s) 679, 1966, 2016
CseI GACGC 6 cut(s) 491, 1453, 1655, 1994, 2684, 2873
CsiI ACCWGGT 2 cut(s) 1874, 3029
Csp6I GTAC 9 cut(s) 1018, 1140, 1226, 1956, 2064, 2751, 2920, 3112, 3144
CspCI CAANNNNNGTGG 2 cut(s) 643, 678
CviQI GTAC 9 cut(s) 1018, 1140, 1226, 1956, 2064, 2751, 2920, 3112, 3144
DdeI CTNAG 7 cut(s) 1308, 1803, 2166, 2570, 2722, 2730, 3101
DinI GGCGCC 1 cut(s) 1475
DraIII CACNNNGTG 1 cut(s) 3285
EaeI YGGCCR 4 cut(s) 718, 1596, 2052, 3308
EagI CGGCCG 2 cut(s) 1596, 3308
Eam1104I CTCTTC 6 cut(s) 16, 37, 924, 1380, 1767, 2500
EarI CTCTTC 6 cut(s) 16, 37, 924, 1380, 1767, 2500
EciI GGCGGA 2 cut(s) 1554, 3290
Ecl136II GAGCTC 2 cut(s) 1760, 3160
EclXI CGGCCG 2 cut(s) 1596, 3308
Eco105I TACGTA 1 cut(s) 3111
Eco130I CCWWGG 8 cut(s) 289, 508, 827, 1818, 1989, 2809, 2923, 3193
Eco147I AGGCCT 3 cut(s) 800, 850, 867
Eco24I GRGCYC 3 cut(s) 835, 1762, 3162
Eco31I GGTCTC 3 cut(s) 2349, 2469, 2497
Eco47I GGWCC 5 cut(s) 402, 875, 1085, 1878, 2670
Eco52I CGGCCG 2 cut(s) 1596, 3308
Eco53kI GAGCTC 2 cut(s) 1760, 3160
Eco57I CTGAAG 6 cut(s) 1863, 2017, 2169, 2660, 3006, 3207
Eco88I CYCGRG 1 cut(s) 1755
EcoICRI GAGCTC 2 cut(s) 1760, 3160
EcoNI CCTNNNNNAGG 1 cut(s) 882
EcoO109I RGGNCCY 4 cut(s) 402, 956, 1085, 2670
EcoT14I CCWWGG 8 cut(s) 289, 508, 827, 1818, 1989, 2809, 2923, 3193
EcoT22I ATGCAT 1 cut(s) 911
EcoT38I GRGCYC 3 cut(s) 835, 1762, 3162
EgeI GGCGCC 1 cut(s) 1475
EheI GGCGCC 1 cut(s) 1475
ErhI CCWWGG 8 cut(s) 289, 508, 827, 1818, 1989, 2809, 2923, 3193
Esp3I CGTCTC 1 cut(s) 481
FalI AAGNNNNNCTT 6 cut(s) 1965, 1997, 2787, 2819, 3177, 3209
FaqI GGGAC 8 cut(s) 62, 332, 415, 885, 1071, 1864, 2209, 2656
FauI CCCGC 4 cut(s) 1458, 1697, 2084, 3315
FbaI TGATCA 1 cut(s) 3229
FblI GTMKAC 1 cut(s) 1467
FokI GGATG 6 cut(s) 68, 172, 289, 1567, 1667, 2181
FriOI GRGCYC 3 cut(s) 835, 1762, 3162
FspBI CTAG 3 cut(s) 567, 2979, 3005
GlaI GCGC 7 cut(s) 609, 1463, 1475, 1480, 1620, 1635, 2777
GsuI CTGGAG 4 cut(s) 867, 1218, 1270, 2487
HaeII RGCGCY 2 cut(s) 1477, 1622
HgaI GACGC 6 cut(s) 491, 1453, 1655, 1994, 2684, 2873
HhaI GCGC 7 cut(s) 610, 1464, 1476, 1481, 1621, 1636, 2778
Hin1I GRCGYC 2 cut(s) 483, 1474
Hin6I GCGC 7 cut(s) 608, 1462, 1474, 1479, 1619, 1634, 2776
HinP1I GCGC 7 cut(s) 608, 1462, 1474, 1479, 1619, 1634, 2776
HindIII AAGCTT 3 cut(s) 2099, 2213, 2707
HphI GGTGA 8 cut(s) 256, 1031, 1124, 1252, 1372, 2291, 2513, 2639
Hpy166II GTNNAC 7 cut(s) 1063, 1298, 1468, 2486, 2660, 2719, 2920
Hpy188I TCNGA 7 cut(s) 234, 282, 481, 523, 577, 1591, 2863
Hpy8I GTNNAC 7 cut(s) 1063, 1298, 1468, 2486, 2660, 2719, 2920
Hpy99I CGWCG 4 cut(s) 625, 1580, 2375, 2627
HpyAV CCTTC 9 cut(s) 878, 1209, 1329, 1908, 2041, 2522, 2573, 2684, 3231
HpyCH4IV ACGT 4 cut(s) 2154, 2370, 2749, 3110
HpyCH4V TGCA 7 cut(s) 427, 909, 1255, 1920, 2211, 2291, 3262
HpyF3I CTNAG 7 cut(s) 1308, 1803, 2166, 2570, 2722, 2730, 3101
HpySE526I ACGT 4 cut(s) 2154, 2370, 2749, 3110
Hsp92I GRCGYC 2 cut(s) 483, 1474
HspAI GCGC 7 cut(s) 608, 1462, 1474, 1479, 1619, 1634, 2776
KasI GGCGCC 1 cut(s) 1473
KflI GGGWCCC 2 cut(s) 402, 2670
Kpn2I TCCGGA 3 cut(s) 1534, 1932, 2698
KpnI GGTACC 2 cut(s) 1021, 1959
KroI GCCGGC 1 cut(s) 2876
KroNI GCCGGC 1 cut(s) 2878
Ksp22I TGATCA 1 cut(s) 3229
LguI GCTCTTC 1 cut(s) 1767
Lsp1109I GCAGC 8 cut(s) 340, 622, 1546, 1628, 1904, 2609, 2780, 2867
LweI GCATC 7 cut(s) 194, 406, 439, 1589, 1713, 1817, 2022
MabI ACCWGGT 2 cut(s) 1874, 3029
MaeI CTAG 3 cut(s) 567, 2979, 3005
MaeII ACGT 4 cut(s) 2154, 2370, 2749, 3110
MaeIII GTNAC 6 cut(s) 549, 1106, 1112, 2386, 3092, 3212
MbiI CCGCTC 3 cut(s) 1441, 1692, 2898
MflI RGATCY 2 cut(s) 282, 591
MhlI GDGCHC 8 cut(s) 589, 835, 988, 1762, 2588, 2951, 3162, 3340
MluI ACGCGT 1 cut(s) 2693
Mly113I GGCGCC 1 cut(s) 1474
MlyI GAGTC 8 cut(s) 1109, 1547, 1595, 1938, 2158, 2229, 2749, 2882
MmeI TCCRAC 6 cut(s) 81, 841, 1191, 2222, 2669, 3147
Mph1103I ATGCAT 1 cut(s) 911
MroI TCCGGA 3 cut(s) 1534, 1932, 2698
MroNI GCCGGC 1 cut(s) 2876
MseI TTAA 6 cut(s) 465, 1938, 2046, 2529, 2550, 3356
MslI CAYNNNNRTG 2 cut(s) 908, 2384
MspA1I CMGCKG 1 cut(s) 2507
MspCI CTTAAG 2 cut(s) 2528, 2549
MteI GCGCNGCGC 1 cut(s) 1477
Mva1269I GAATGC 1 cut(s) 2778
MvnI CGCG 6 cut(s) 1464, 1479, 2091, 2439, 2695, 3180
NaeI GCCGGC 1 cut(s) 2878
NarI GGCGCC 1 cut(s) 1474
NciI CCSGG 1 cut(s) 589
NcoI CCATGG 2 cut(s) 508, 2809
NgoMIV GCCGGC 1 cut(s) 2876
NmuCI GTSAC 4 cut(s) 549, 1112, 2386, 3092
NruI TCGCGA 1 cut(s) 3180
NsiI ATGCAT 1 cut(s) 911
NspI RCATGY 4 cut(s) 434, 909, 913, 2207
PaeR7I CTCGAG 1 cut(s) 1755
PagI TCATGA 3 cut(s) 2160, 2539, 2736
PceI AGGCCT 3 cut(s) 800, 850, 867
PciI ACATGT 1 cut(s) 2203
PciSI GCTCTTC 1 cut(s) 1767
PcsI WCGNNNNNNNCGW 1 cut(s) 2022
PctI GAATGC 1 cut(s) 2778
PdiI GCCGGC 1 cut(s) 2878
PfeI GAWTC 5 cut(s) 53, 1163, 1867, 1995, 2268
PflMI CCANNNNNTGG 2 cut(s) 170, 1824
PfoI TCCNGGA 1 cut(s) 1234
PleI GAGTC 8 cut(s) 1109, 1546, 1595, 1938, 2158, 2229, 2748, 2882
PluTI GGCGCC 1 cut(s) 1477
PpsI GAGTC 8 cut(s) 1109, 1546, 1595, 1938, 2158, 2229, 2748, 2882
Ppu21I YACGTR 2 cut(s) 2750, 3111
PpuMI RGGWCCY 3 cut(s) 402, 1085, 2670
PscI ACATGT 1 cut(s) 2203
PshAI GACNNNNGTC 1 cut(s) 2811
PshBI ATTAAT 1 cut(s) 465
Psp124BI GAGCTC 2 cut(s) 1762, 3162
Psp5II RGGWCCY 3 cut(s) 402, 1085, 2670
PspOMI GGGCCC 1 cut(s) 831
PspPPI RGGWCCY 3 cut(s) 402, 1085, 2670
PstI CTGCAG 1 cut(s) 2293
PsuI RGATCY 2 cut(s) 282, 591
PvuII CAGCTG 1 cut(s) 2507
RruI TCGCGA 1 cut(s) 3180
RsaI GTAC 9 cut(s) 1019, 1141, 1227, 1957, 2065, 2752, 2921, 3113, 3145
RsaNI GTAC 9 cut(s) 1018, 1140, 1226, 1956, 2064, 2751, 2920, 3112, 3144
RseI CAYNNNNRTG 2 cut(s) 908, 2384
SacI GAGCTC 2 cut(s) 1762, 3162
SapI GCTCTTC 1 cut(s) 1767
SaqAI TTAA 6 cut(s) 465, 1938, 2046, 2529, 2550, 3356
SchI GAGTC 8 cut(s) 1109, 1547, 1595, 1938, 2158, 2229, 2749, 2882
SduI GDGCHC 8 cut(s) 589, 835, 988, 1762, 2588, 2951, 3162, 3340
SexAI ACCWGGT 2 cut(s) 1874, 3029
SfaNI GCATC 7 cut(s) 194, 406, 439, 1589, 1713, 1817, 2022
SfcI CTRYAG 3 cut(s) 1332, 2289, 2964
SfoI GGCGCC 1 cut(s) 1475
Sfr274I CTCGAG 1 cut(s) 1755
SinI GGWCC 5 cut(s) 402, 875, 1085, 1878, 2670
SlaI CTCGAG 1 cut(s) 1755
SmiMI CAYNNNNRTG 2 cut(s) 908, 2384
SmlI CTYRAG 4 cut(s) 1244, 1755, 2528, 2549
SmoI CTYRAG 4 cut(s) 1244, 1755, 2528, 2549
SnaBI TACGTA 1 cut(s) 3111
SseBI AGGCCT 3 cut(s) 800, 850, 867
SspDI GGCGCC 1 cut(s) 1473
SspMI CTAG 3 cut(s) 567, 2979, 3005
SstI GAGCTC 2 cut(s) 1762, 3162
StuI AGGCCT 3 cut(s) 800, 850, 867
StyI CCWWGG 8 cut(s) 289, 508, 827, 1818, 1989, 2809, 2923, 3193
TaiI ACGT 4 cut(s) 2157, 2373, 2752, 3113
TauI GCSGC 5 cut(s) 693, 1479, 2442, 2898, 3313
TfiI GAWTC 5 cut(s) 53, 1163, 1867, 1995, 2268
Tru1I TTAA 6 cut(s) 465, 1938, 2046, 2529, 2550, 3356
Tru9I TTAA 6 cut(s) 465, 1938, 2046, 2529, 2550, 3356
TscAI CASTG 9 cut(s) 55, 175, 547, 649, 1632, 1732, 2278, 2973, 3109
TseFI GTSAC 4 cut(s) 549, 1112, 2386, 3092
TseI GCWGC 8 cut(s) 353, 610, 1559, 1616, 1917, 2597, 2768, 2880
Tsp45I GTSAC 4 cut(s) 549, 1112, 2386, 3092
TspDTI ATGAA 7 cut(s) 911, 1506, 2149, 2487, 2725, 3077, 3125
TspGWI ACGGA 3 cut(s) 1213, 1564, 2580
TspRI CASTG 9 cut(s) 55, 175, 547, 649, 1632, 1732, 2278, 2973, 3109
Van91I CCANNNNNTGG 2 cut(s) 170, 1824
Vha464I CTTAAG 2 cut(s) 2528, 2549
VpaK11BI GGWCC 5 cut(s) 402, 875, 1085, 1878, 2670
VspI ATTAAT 1 cut(s) 465
XagI CCTNNNNNAGG 1 cut(s) 882
XapI RAATTY 3 cut(s) 312, 1194, 1530
XceI RCATGY 4 cut(s) 434, 909, 913, 2207
XcmI CCANNNNNNNNNTGG 2 cut(s) 891, 2270
XhoI CTCGAG 1 cut(s) 1755
XmiI GTMKAC 1 cut(s) 1467
XspI CTAG 3 cut(s) 567, 2979, 3005
Zsp2I ATGCAT 1 cut(s) 911
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.