Mitochondrial protein
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 83 |
| AfaI | GTAC | 1 cut(s) | 19 |
| AflIII | ACRYGT | 2 cut(s) | 20, 307 |
| AgsI | TTSAA | 3 cut(s) | 183, 228, 305 |
| AluBI | AGCT | 2 cut(s) | 384, 394 |
| AluI | AGCT | 2 cut(s) | 384, 394 |
| Alw21I | GWGCWC | 1 cut(s) | 351 |
| Alw26I | GTCTC | 1 cut(s) | 318 |
| Alw44I | GTGCAC | 1 cut(s) | 347 |
| Ama87I | CYCGRG | 1 cut(s) | 402 |
| ApaLI | GTGCAC | 1 cut(s) | 347 |
| ApoI | RAATTY | 1 cut(s) | 83 |
| AseI | ATTAAT | 1 cut(s) | 369 |
| AsuHPI | GGTGA | 1 cut(s) | 158 |
| AvaI | CYCGRG | 1 cut(s) | 402 |
| BaeGI | GKGCMC | 1 cut(s) | 351 |
| BbsI | GAAGAC | 1 cut(s) | 369 |
| Bbv12I | GWGCWC | 1 cut(s) | 351 |
| BccI | CCATC | 2 cut(s) | 8, 50 |
| BclI | TGATCA | 1 cut(s) | 376 |
| BcoDI | GTCTC | 1 cut(s) | 318 |
| BfaI | CTAG | 2 cut(s) | 78, 321 |
| BfmI | CTRYAG | 1 cut(s) | 219 |
| BmeT110I | CYCGRG | 1 cut(s) | 402 |
| BpiI | GAAGAC | 1 cut(s) | 369 |
| BpuEI | CTTGAG | 1 cut(s) | 233 |
| BsaJI | CCNNGG | 1 cut(s) | 35 |
| BseDI | CCNNGG | 1 cut(s) | 35 |
| BseSI | GKGCMC | 1 cut(s) | 351 |
| BsiHKAI | GWGCWC | 1 cut(s) | 351 |
| BsiHKCI | CYCGRG | 1 cut(s) | 402 |
| BsmAI | GTCTC | 1 cut(s) | 318 |
| BsmBI | CGTCTC | 1 cut(s) | 318 |
| BsoBI | CYCGRG | 1 cut(s) | 402 |
| Bsp1286I | GDGCHC | 1 cut(s) | 351 |
| Bsp143I | GATC | 1 cut(s) | 376 |
| BspMAI | CTGCAG | 1 cut(s) | 223 |
| BssECI | CCNNGG | 1 cut(s) | 35 |
| BssMI | GATC | 1 cut(s) | 376 |
| BstC8I | GCNNGC | 1 cut(s) | 396 |
| BstKTI | GATC | 1 cut(s) | 379 |
| BstMAI | GTCTC | 1 cut(s) | 318 |
| BstMBI | GATC | 1 cut(s) | 376 |
| BstNSI | RCATGY | 3 cut(s) | 24, 311, 320 |
| BstSFI | CTRYAG | 1 cut(s) | 219 |
| BstSLI | GKGCMC | 1 cut(s) | 351 |
| BstV2I | GAAGAC | 1 cut(s) | 369 |
| BtsI | GCAGTG | 1 cut(s) | 120 |
| BtsIMutI | CAGTG | 1 cut(s) | 120 |
| Cac8I | GCNNGC | 1 cut(s) | 396 |
| Csp6I | GTAC | 1 cut(s) | 18 |
| CviAII | CATG | 4 cut(s) | 21, 241, 308, 317 |
| CviJI | RGCY | 5 cut(s) | 191, 196, 335, 384, 394 |
| CviKI_1 | RGCY | 5 cut(s) | 191, 196, 335, 384, 394 |
| CviQI | GTAC | 1 cut(s) | 18 |
| DpnI | GATC | 1 cut(s) | 378 |
| DpnII | GATC | 1 cut(s) | 376 |
| Eco88I | CYCGRG | 1 cut(s) | 402 |
| Esp3I | CGTCTC | 1 cut(s) | 318 |
| FaeI | CATG | 4 cut(s) | 24, 244, 311, 320 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 175, 207 |
| FatI | CATG | 4 cut(s) | 20, 240, 307, 316 |
| FbaI | TGATCA | 1 cut(s) | 376 |
| FspBI | CTAG | 2 cut(s) | 78, 321 |
| Hin1II | CATG | 4 cut(s) | 24, 244, 311, 320 |
| HinfI | GANTC | 1 cut(s) | 284 |
| HphI | GGTGA | 1 cut(s) | 158 |
| Hpy166II | GTNNAC | 2 cut(s) | 26, 349 |
| Hpy188I | TCNGA | 1 cut(s) | 358 |
| Hpy188III | TCNNGA | 4 cut(s) | 43, 228, 250, 402 |
| Hpy8I | GTNNAC | 2 cut(s) | 26, 349 |
| HpyCH4V | TGCA | 3 cut(s) | 221, 244, 349 |
| Hsp92II | CATG | 4 cut(s) | 24, 244, 311, 320 |
| Ksp22I | TGATCA | 1 cut(s) | 376 |
| Kzo9I | GATC | 1 cut(s) | 376 |
| LpnPI | CCDG | 1 cut(s) | 129 |
| MaeI | CTAG | 2 cut(s) | 78, 321 |
| MalI | GATC | 1 cut(s) | 378 |
| MboI | GATC | 1 cut(s) | 376 |
| MboII | GAAGA | 1 cut(s) | 374 |
| MhlI | GDGCHC | 1 cut(s) | 351 |
| MluCI | AATT | 5 cut(s) | 72, 83, 165, 199, 370 |
| MnlI | CCTC | 5 cut(s) | 39, 45, 181, 198, 409 |
| MseI | TTAA | 3 cut(s) | 87, 164, 369 |
| NdeII | GATC | 1 cut(s) | 376 |
| NlaIII | CATG | 4 cut(s) | 24, 244, 311, 320 |
| NspI | RCATGY | 3 cut(s) | 24, 311, 320 |
| PciI | ACATGT | 2 cut(s) | 20, 307 |
| PfeI | GAWTC | 1 cut(s) | 284 |
| PscI | ACATGT | 2 cut(s) | 20, 307 |
| PshBI | ATTAAT | 1 cut(s) | 369 |
| PstI | CTGCAG | 1 cut(s) | 223 |
| RsaI | GTAC | 1 cut(s) | 19 |
| RsaNI | GTAC | 1 cut(s) | 18 |
| SaqAI | TTAA | 3 cut(s) | 87, 164, 369 |
| Sau3AI | GATC | 1 cut(s) | 376 |
| SduI | GDGCHC | 1 cut(s) | 351 |
| SetI | ASST | 5 cut(s) | 31, 37, 346, 386, 396 |
| SfcI | CTRYAG | 1 cut(s) | 219 |
| SmlI | CTYRAG | 1 cut(s) | 248 |
| SmoI | CTYRAG | 1 cut(s) | 248 |
| Sse9I | AATT | 5 cut(s) | 72, 83, 165, 199, 370 |
| SspI | AATATT | 1 cut(s) | 215 |
| SspMI | CTAG | 2 cut(s) | 78, 321 |
| TasI | AATT | 5 cut(s) | 72, 83, 165, 199, 370 |
| TfiI | GAWTC | 1 cut(s) | 284 |
| Tru1I | TTAA | 3 cut(s) | 87, 164, 369 |
| Tru9I | TTAA | 3 cut(s) | 87, 164, 369 |
| TscAI | CASTG | 1 cut(s) | 120 |
| TspDTI | ATGAA | 1 cut(s) | 375 |
| TspRI | CASTG | 1 cut(s) | 120 |
| VneI | GTGCAC | 1 cut(s) | 347 |
| VspI | ATTAAT | 1 cut(s) | 369 |
| XapI | RAATTY | 1 cut(s) | 83 |
| XceI | RCATGY | 3 cut(s) | 24, 311, 320 |
| XspI | CTAG | 2 cut(s) | 78, 321 |