FvH4_1g10851

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000215
Physical Location & Seq
Reverse (-)
5920591 .. 5923446
2856 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g10851.t1

Sequence Viewer

Length: 2340 bp
ATGAATACTCACGAAATACCAGTAGTAACTTGTGACATCCGTTCCATGCTGAAGCATAGGTTCTCTTTACTCTCTCCTGATCAATCTCTTTCGCTCTCGCCGTTTCTCTTGCTGGTTCGGAATTTCGGAGTGAGTTTCTCAAGCAAGCCAGGCTTTGTCATTCCTTCCAGAAATTGGGATAATCTCAATGCCGAGTCGAGAGATTTATTAGTTGAAAATGGTCCTGTGAGAGATTTGTTAATGGAGGAAAGTCCTCAGCATAAGTCCTCTGTGGGATTCCGTTCCGAGTTTTACACTCGGATTATAGCAAATGGAGAGAAAGTGGATAGAGATTGGCCAGTGTACTCAAAGGAGAAGTCTGAGTTTGCGAAGGAAGGATGTGGAGATTGGGGGAATGTTGGTGTTTTGATTAGAGAACATGAGAGAAGTATGGCACACATGTTTAACATGACAACCTGGAAAGGTTTACGTCTGAGATTAAAGAAAGATGAAAGTGATGAAAGAATCGACAATGCTGTTTTTAAGCTAGAGAAAGAGCATTGGAGTAGTGTGTTGCTGAGAATAATTGCAGTTGTGAAGTTTCTTGCCAAGAATAACATGACATTTTTTGAAACGACTGAGAGCATGGATGAGGAGGATTGTGGAATGGATGAGGAGGATTGTGGAAACCTTACAAGCTTCATTGAAATGATTGCGGAGTGGGATTATGTGATGCAAGCACATATCAGACGTATCAAAATCAATGAGATTCGTCATCATTATCTTGGTCGTAACATCCAGGAATTGATGACTGCTCTAGCTTCTGAAATCAAAAGTGCAATCGTCAGGAAAATCAAAGAAGCCAAGTATTTTTCTGTGATTGTGGACTGTGCTTTTGATGCAGGTGGTGAAAAACAAACGTTTTTGATACTGCGAGATGTGGATGTTTCTACGAGTCCAATAAAAGTTGACGAGTACTTTTTAGAGTTTTTAAACTTAAGCAATACATCCGAACATGGACCTTTTGAACAGTTGCAGAATGTGTTAAAAGCTCTTGATCTTGATATTGATGATATAAGAGGACAGGGATATGGTATTGGATCTCTGGTGAAAGGGAGAGCCGAAGGTATACAAGAAAAGCTTTCAGGTATAAATCCAAGAGCATTGTACACACCATGGGGTTGTTGTAGTCTCAATGTAACTCTTTGTGATATGGTAGACCCTTCTAGCAGACTGTTTTGGTTTTTTGGATCCATACAATGCATATATTCAGTGTTTGCTCATTGTACAAAGTGTTGGCAAATTTTGGAGGATAATGTAAAAGGTTTCGCTCTTGAACCATCGTCAACCAAACGATGGGAGAGTCACATCGAATGTGTTAAAGCGATAAGATTCCATGCTTCAGATGTAAGAGAAGCTTTGCTTGAAGTAGCTGATACTGAGATTGACCTCGGAGTAGTCTCCCAAGCTAATTCTTTAGCAGAATATGATCTTGAATATGGGTTCTTATTAGGCATGATCATTTGGTTTGATATATTATCTGCTGTTGACGTGGTTAGCAAATACTTGCAATCTAAAGACATGTGTATTGATAGTGCTATAGCTGAAATGAAAAGGCTGATCCAGTTTTTTGAAAGGTACCGGGAAGTTGGGTTTACAGAGGCATTGAAAGTTGCTAAAGATATTGCCACCGAAATGGAAATTGATTGTGTGTTTGATGAAGCACGTGAACGTCGTAGAAGAAAATGTTTTGGCAAGAATGTCGATCAATCATCTCCTGAATCACTTGAAGAATCCTTCAGAGTTCAGTATTTCCTATACACTGTGGATCAAGTGACTGGTTTATTGAAGAGAACTCTTGCACAGTATCAAGCATATGAGGACATCTTTGGGTTTCTGTTTTGTTCTGAGAAGTTGAATTCATTTGAGGAAAAACATTTGAAAACTTCTTGTTGTCAGCTTGAAATGTTTCTCAATCATGAGAAGTTTTGTGACGTAGATGGGAACAGCTTATTTGAAGAACTGCAATGGTTACGGAAGAAGTTGCCAGAAGAAAATATGACAGCCATTGAGATATTAAATTTCATAAATCGGCTGGACTGTCTTCCGAATGCATACATTGCCTATAGAATTATGCTGACCATACCTGTCCTGTTCACATCCACTGGTGGTTTTTCAAAATTGGAGATACTGAATTCTTACTTGCAATCGCCAATGTCACAAGAAGTTTTAGATGGACTAGCTTTGATTTCTACTGAGAAGGGGTTCCTAGAAAAACTTGACTATGACAGTTTAATCGATGATTGTGCAACTAAAAATGCAAGAAGAACAATTCTCAGTGATACATGTTGCTCAGATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

780

Amino Acids

89.42

Weight (kDa)

5.04

Isoelectric Point (pI)

43.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35150 AT2G06500 AT2G16040 AT2G19960 AT2G19960 AT3G29638 AT3G29794 AT4G10200 AT4G10200 AT5G35475
fragaria_vesca FvH4_1g08455 FvH4_1g08761 FvH4_1g10851 FvH4_1g17271 FvH4_1g26762 FvH4_2g15031 FvH4_2g18762 FvH4_2g29241 FvH4_2g32571 FvH4_4g01531 FvH4_4g12942 FvH4_4g14421 FvH4_4g14431 FvH4_4g14434 FvH4_5g30891 FvH4_6g47641 FvH4_6g47642
malus_domestica MD01G1087700.v1.1 MD11G1104400.v1.1
pyrus_communis pycom05g13550 pycom11g18320
rosa_chinensis RchiOBHm_Chr1g0320361 RchiOBHm_Chr1g0321011 RchiOBHm_Chr1g0321921 RchiOBHm_Chr1g0377611 RchiOBHm_Chr1g0379061 RchiOBHm_Chr2g0106921 RchiOBHm_Chr2g0137341 RchiOBHm_Chr2g0139641 RchiOBHm_Chr2g0139651 RchiOBHm_Chr2g0144921 RchiOBHm_Chr2g0161851 RchiOBHm_Chr2g0172511 RchiOBHm_Chr3g0449931 RchiOBHm_Chr3g0452101 RchiOBHm_Chr3g0480551 RchiOBHm_Chr4g0427821 RchiOBHm_Chr4g0431861 RchiOBHm_Chr4g0435271 RchiOBHm_Chr5g0015121 RchiOBHm_Chr5g0031951 RchiOBHm_Chr5g0034331 RchiOBHm_Chr5g0059431 RchiOBHm_Chr6g0288531 RchiOBHm_Chr6g0308901 RchiOBHm_Chr7g0198801 RchiOBHm_Chr7g0198811 RchiOBHm_Chr7g0200001 RchiOBHm_Chr7g0205811 RchiOBHm_Chr7g0230921 RchiOBHm_Chr7g0233981
rosa_multiflora Rmu_sc0000475.1_g000004 Rmu_sc0000483.1_g000021 Rmu_sc0000551.1_g000007 Rmu_sc0000761.1_g000023 Rmu_sc0000898.1_g000072 Rmu_sc0001921.1_g000031 Rmu_sc0002804.1_g000009 Rmu_sc0002880.1_g000005 Rmu_sc0003207.1_g000046 Rmu_sc0003914.1_g000010 Rmu_sc0004165.1_g000089 Rmu_sc0004209.1_g000001 Rmu_sc0004402.1_g000017 Rmu_sc0004443.1_g000001 Rmu_sc0005506.1_g000007 Rmu_sc0005506.1_g000009 Rmu_sc0006443.1_g000001 Rmu_sc0008191.1_g000019 Rmu_sc0008328.1_g000004 Rmu_sc0009489.1_g000004 Rmu_sc0010368.1_g000012 Rmu_sc0010368.1_g000014 Rmu_sc0011232.1_g000005 Rmu_sc0011630.1_g000006 Rmu_sc0014780.1_g000001 Rmu_sc0028257.1_g000002 Rmu_sc0029902.1_g000001 Rmu_ssc0000386.1_g000041 Rmu_ssc0000434.1_g000020
rosa_roxburghii Rroxscaffold_2G00084750 Rroxscaffold_2G00090380 Rroxscaffold_2G00108310 Rroxscaffold_3G00235050 Rroxscaffold_3G00252220 Rroxscaffold_4G00323580 Rroxscaffold_5G00337920 Rroxscaffold_5G00370050 Rroxscaffold_7G00169180 Rroxscaffold_7G00200470
rosa_rugosa Rorug01G0156600.1 Rorug02G0305900 Rorug02G0362300 Rorug03G0111800 Rorug03G0273500 Rorug03G0340700 Rorug04G0196000 Rorug05G0251300 Rorug05G0465700 Rorug06G0031300 Rorug06G0170700 Rorug07G0226000 Rorug07G0263200
rosa_samantha Rh1CG203400 Rh1CG203500 Rh3AG212700 Rh3BG246300 Rh4BG318100 Rh6BG118800 Rh6DG105400 Rh7DG231500
rosa_wichuraiana Rw1G002740 Rw1G016740 Rw2G009190 Rw2G021330 Rw2G030170 Rw2G034650 Rw2G034990 Rw2G046190 Rw3G019490 Rw3G019500 Rw3G019510 Rw3G019990 Rw3G020480 Rw3G026090 Rw4G005490 Rw4G007090 Rw4G022920 Rw4G030140 Rw5G011030 Rw5G019330 Rw5G027260 Rw5G029990 Rw5G034080 Rw6G025080 Rw6G031390 Rw6G038690 Rw7G016630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 872
Acc36I ACCTGC 1 cut(s) 872
Acc65I GGTACC 1 cut(s) 1617
AccB1I GGYRCC 1 cut(s) 1617
AccB7I CCANNNNNTGG 2 cut(s) 174, 1335
AccI GTMKAC 2 cut(s) 1108, 1197
AciI CCGC 1 cut(s) 695
AclI AACGTT 1 cut(s) 899
AclWI GGATC 5 cut(s) 1087, 1224, 1237, 1594, 1815
AcoI YGGCCR 1 cut(s) 335
AcsI RAATTY 5 cut(s) 121, 1281, 1897, 2059, 2173
AcuI CTGAAG 3 cut(s) 71, 1365, 1762
AcvI CACGTG 1 cut(s) 1706
AfaI GTAC 5 cut(s) 344, 956, 1148, 1267, 1619
AfiI CCNNNNNNNGG 2 cut(s) 174, 1335
AflII CTTAAG 1 cut(s) 976
AflIII ACRYGT 3 cut(s) 438, 1560, 2324
AjiI CACGTC 1 cut(s) 1531
AjnI CCWGG 3 cut(s) 148, 455, 777
Alw26I GTCTC 2 cut(s) 1175, 1444
AlwI GGATC 5 cut(s) 1087, 1224, 1237, 1594, 1815
AoxI GGCC 1 cut(s) 335
ApoI RAATTY 5 cut(s) 121, 1281, 1897, 2059, 2173
ArsI GACNNNNNNTTYG 4 cut(s) 341, 373, 857, 889
Asp700I GAANNNNTTC 2 cut(s) 1947, 2243
Asp718I GGTACC 1 cut(s) 1617
AspS9I GGNCC 2 cut(s) 221, 998
AsuC2I CCSGG 1 cut(s) 1622
AsuHPI GGTGA 2 cut(s) 899, 1099
AvaII GGWCC 2 cut(s) 221, 998
BalI TGGCCA 1 cut(s) 337
BamHI GGATCC 1 cut(s) 1229
BanI GGYRCC 1 cut(s) 1617
BbrPI CACGTG 1 cut(s) 1706
BbsI GAAGAC 1 cut(s) 2075
BbvCI CCTCAGC 1 cut(s) 255
BccI CCATC 4 cut(s) 1327, 1329, 1973, 2207
BceAI ACGGC 1 cut(s) 85
BcgI CGANNNNNNTGC 4 cut(s) 1723, 1757, 2267, 2301
BciT130I CCWGG 3 cut(s) 150, 457, 779
BclI TGATCA 2 cut(s) 79, 1497
BcnI CCSGG 1 cut(s) 1622
BcoDI GTCTC 2 cut(s) 1175, 1444
BfaI CTAG 5 cut(s) 527, 797, 1206, 2219, 2249
BfmI CTRYAG 2 cut(s) 1578, 2104
BfrI CTTAAG 1 cut(s) 976
BfuAI ACCTGC 1 cut(s) 872
BmcAI AGTACT 1 cut(s) 956
Bme1390I CCNGG 4 cut(s) 150, 457, 779, 1622
Bme18I GGWCC 2 cut(s) 221, 998
BmgBI CACGTC 1 cut(s) 1531
BmgT120I GGNCC 2 cut(s) 221, 998
BmiI GGNNCC 3 cut(s) 1231, 1619, 2246
BmrFI CCNGG 4 cut(s) 150, 457, 779, 1622
BmsI GCATC 2 cut(s) 702, 868
BpiI GAAGAC 1 cut(s) 2075
Bpu10I CCTNAGC 1 cut(s) 255
BpuEI CTTGAG 1 cut(s) 124
BpuMI CCSGG 1 cut(s) 1622
Bsa29I ATCGAT 1 cut(s) 2277
BsaAI YACGTR 1 cut(s) 1706
BsaJI CCNNGG 2 cut(s) 1154, 1429
BsaXI ACNNNNNCTCC 2 cut(s) 306, 336
Bsc4I CCNNNNNNNGG 2 cut(s) 174, 1335
Bse1I ACTGG 5 cut(s) 20, 338, 1603, 1822, 2149
Bse3DI GCAATG 2 cut(s) 2012, 2097
BseBI CCWGG 3 cut(s) 150, 457, 779
BseCI ATCGAT 1 cut(s) 2277
BseDI CCNNGG 2 cut(s) 1154, 1429
BseGI GGATG 8 cut(s) 36, 383, 634, 655, 774, 928, 986, 2138
BseLI CCNNNNNNNGG 2 cut(s) 174, 1335
BseMI GCAATG 2 cut(s) 2012, 2097
BseMII CTCAG 9 cut(s) 269, 351, 464, 548, 609, 1410, 1878, 2226, 2329
BseNI ACTGG 5 cut(s) 20, 338, 1603, 1822, 2149
BseRI GAGGAG 2 cut(s) 647, 668
BshFI GGCC 1 cut(s) 337
BshNI GGYRCC 1 cut(s) 1617
BshVI ATCGAT 1 cut(s) 2277
BsiSI CCGG 1 cut(s) 1621
BslI CCNNNNNNNGG 2 cut(s) 174, 1335
BsmAI GTCTC 2 cut(s) 1175, 1444
BsmI GAATGC 1 cut(s) 2095
BsnI GGCC 1 cut(s) 337
Bsp1407I TGTACA 2 cut(s) 1146, 1265
Bsp143I GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
Bsp19I CCATGG 1 cut(s) 1154
BspACI CCGC 1 cut(s) 695
BspANI GGCC 1 cut(s) 337
BspCNI CTCAG 9 cut(s) 268, 352, 465, 549, 610, 1411, 1879, 2227, 2328
BspDI ATCGAT 1 cut(s) 2277
BspHI TCATGA 1 cut(s) 1957
BspLI GGNNCC 3 cut(s) 1231, 1619, 2246
BspMI ACCTGC 1 cut(s) 872
BspPI GGATC 5 cut(s) 1087, 1224, 1237, 1594, 1815
BspT107I GGYRCC 1 cut(s) 1617
BspTI CTTAAG 1 cut(s) 976
BsrDI GCAATG 2 cut(s) 2012, 2097
BsrGI TGTACA 2 cut(s) 1146, 1265
BsrI ACTGG 5 cut(s) 20, 338, 1603, 1822, 2149
BssECI CCNNGG 2 cut(s) 1154, 1429
BssMI GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
BssNAI GTATAC 1 cut(s) 1109
BssT1I CCWWGG 1 cut(s) 1154
Bst1107I GTATAC 1 cut(s) 1109
Bst2UI CCWGG 3 cut(s) 150, 457, 779
Bst4CI ACNGT 7 cut(s) 869, 1011, 1215, 1804, 1845, 2081, 2270
Bst6I CTCTTC 1 cut(s) 1823
BstAFI CTTAAG 1 cut(s) 976
BstAPI GCANNNNNTGC 1 cut(s) 2099
BstAUI TGTACA 2 cut(s) 1146, 1265
BstBAI YACGTR 1 cut(s) 1706
BstC8I GCNNGC 2 cut(s) 146, 717
BstDSI CCRYGG 1 cut(s) 1154
BstF5I GGATG 8 cut(s) 36, 383, 634, 655, 774, 928, 986, 2138
BstKTI GATC 9 cut(s) 82, 1039, 1082, 1232, 1471, 1500, 1602, 1747, 1810
BstMAI GTCTC 2 cut(s) 1175, 1444
BstMBI GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
BstMWI GCNNNNNNNGC 3 cut(s) 150, 878, 2099
BstNI CCWGG 3 cut(s) 150, 457, 779
BstNSI RCATGY 3 cut(s) 442, 1564, 2328
BstSCI CCNGG 4 cut(s) 148, 455, 777, 1620
BstSFI CTRYAG 2 cut(s) 1578, 2104
BstV2I GAAGAC 1 cut(s) 2075
BstX2I RGATCY 2 cut(s) 1079, 1229
BstXI CCANNNNNNTGG 1 cut(s) 1675
BstYI RGATCY 2 cut(s) 1079, 1229
BstZ17I GTATAC 1 cut(s) 1109
Bsu15I ATCGAT 1 cut(s) 2277
BsuRI GGCC 1 cut(s) 337
BsuTUI ATCGAT 1 cut(s) 2277
BtgI CCRYGG 1 cut(s) 1154
BtrI CACGTC 1 cut(s) 1531
BtsCI GGATG 8 cut(s) 36, 383, 634, 655, 774, 928, 986, 2138
BtsIMutI CAGTG 5 cut(s) 345, 1257, 1800, 2142, 2323
BveI ACCTGC 1 cut(s) 872
Cac8I GCNNGC 2 cut(s) 146, 717
CciI TCATGA 1 cut(s) 1957
Cfr13I GGNCC 2 cut(s) 221, 998
ClaI ATCGAT 1 cut(s) 2277
Csp6I GTAC 5 cut(s) 343, 955, 1147, 1266, 1618
CviQI GTAC 5 cut(s) 343, 955, 1147, 1266, 1618
DpnI GATC 9 cut(s) 81, 1038, 1081, 1231, 1470, 1499, 1601, 1746, 1809
DpnII GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
DraI TTTAAA 1 cut(s) 972
EaeI YGGCCR 1 cut(s) 335
Eam1104I CTCTTC 1 cut(s) 1823
EarI CTCTTC 1 cut(s) 1823
Eco130I CCWWGG 1 cut(s) 1154
Eco47I GGWCC 2 cut(s) 221, 998
Eco57I CTGAAG 3 cut(s) 71, 1365, 1762
Eco72I CACGTG 1 cut(s) 1706
EcoRI GAATTC 2 cut(s) 1897, 2173
EcoRII CCWGG 3 cut(s) 148, 455, 777
EcoT14I CCWWGG 1 cut(s) 1154
EcoT22I ATGCAT 2 cut(s) 1244, 2095
ErhI CCWWGG 1 cut(s) 1154
FalI AAGNNNNNCTT 8 cut(s) 137, 169, 1104, 1136, 1381, 1413, 1386, 1418
FauNDI CATATG 1 cut(s) 1855
FbaI TGATCA 2 cut(s) 79, 1497
FblI GTMKAC 2 cut(s) 1108, 1197
FokI GGATG 8 cut(s) 23, 390, 641, 662, 761, 935, 973, 2125
FspBI CTAG 5 cut(s) 527, 797, 1206, 2219, 2249
HaeIII GGCC 1 cut(s) 337
HapII CCGG 1 cut(s) 1621
HincII GTYRAC 3 cut(s) 949, 1326, 1528
HindII GTYRAC 3 cut(s) 949, 1326, 1528
HindIII AAGCTT 3 cut(s) 676, 1118, 1395
HinfI GANTC 9 cut(s) 194, 276, 504, 748, 934, 1342, 1371, 1760, 1772
HpaII CCGG 1 cut(s) 1621
HphI GGTGA 2 cut(s) 899, 1099
Hpy99I CGWCG 1 cut(s) 1716
HpyAV CCTTC 7 cut(s) 174, 364, 368, 1097, 1212, 1786, 2233
HpyCH4III ACNGT 7 cut(s) 869, 1011, 1215, 1804, 1845, 2081, 2270
HpyCH4IV ACGT 7 cut(s) 469, 730, 899, 1530, 1705, 1711, 1974
HpyF10VI GCNNNNNNNGC 3 cut(s) 150, 878, 2099
HpySE526I ACGT 7 cut(s) 469, 730, 899, 1530, 1705, 1711, 1974
KpnI GGTACC 1 cut(s) 1621
Ksp22I TGATCA 2 cut(s) 79, 1497
Kzo9I GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
LweI GCATC 2 cut(s) 702, 868
MaeI CTAG 5 cut(s) 527, 797, 1206, 2219, 2249
MaeII ACGT 7 cut(s) 469, 730, 899, 1530, 1705, 1711, 1974
MaeIII GTNAC 9 cut(s) 25, 32, 770, 1177, 1343, 1813, 1970, 2010, 2196
MalI GATC 9 cut(s) 81, 1038, 1081, 1231, 1470, 1499, 1601, 1746, 1809
MboI GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
MboII GAAGA 8 cut(s) 1731, 1781, 1840, 2009, 2029, 2042, 2075, 2316
MflI RGATCY 2 cut(s) 1079, 1229
MlsI TGGCCA 1 cut(s) 337
MluNI TGGCCA 1 cut(s) 337
MlyI GAGTC 3 cut(s) 203, 943, 1351
Mox20I TGGCCA 1 cut(s) 337
Mph1103I ATGCAT 2 cut(s) 1244, 2095
MroXI GAANNNNTTC 2 cut(s) 1947, 2243
MscI TGGCCA 1 cut(s) 337
MslI CAYNNNNRTG 2 cut(s) 686, 1673
Msp20I TGGCCA 1 cut(s) 337
MspCI CTTAAG 1 cut(s) 976
MspI CCGG 1 cut(s) 1621
MspR9I CCNGG 4 cut(s) 150, 457, 779, 1622
Mva1269I GAATGC 1 cut(s) 2095
MvaI CCWGG 3 cut(s) 150, 457, 779
MwoI GCNNNNNNNGC 3 cut(s) 150, 878, 2099
NciI CCSGG 1 cut(s) 1622
NcoI CCATGG 1 cut(s) 1154
NdeI CATATG 1 cut(s) 1855
NdeII GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
NlaIV GGNNCC 3 cut(s) 1231, 1619, 2246
NmeAIII GCCGAG 1 cut(s) 217
NmuCI GTSAC 5 cut(s) 32, 1343, 1813, 1970, 2196
NsiI ATGCAT 2 cut(s) 1244, 2095
NspI RCATGY 3 cut(s) 442, 1564, 2328
PagI TCATGA 1 cut(s) 1957
PaqCI CACCTGC 1 cut(s) 872
PciI ACATGT 3 cut(s) 438, 1560, 2324
PcsI WCGNNNNNNNCGW 2 cut(s) 98, 1711
PctI GAATGC 1 cut(s) 2095
PdmI GAANNNNTTC 2 cut(s) 1947, 2243
PfeI GAWTC 6 cut(s) 276, 504, 748, 1371, 1760, 1772
PflMI CCANNNNNTGG 2 cut(s) 174, 1335
PfoI TCCNGGA 1 cut(s) 777
PleI GAGTC 3 cut(s) 202, 942, 1350
PmaCI CACGTG 1 cut(s) 1706
PmlI CACGTG 1 cut(s) 1706
PpsI GAGTC 3 cut(s) 202, 942, 1350
Ppu21I YACGTR 1 cut(s) 1706
PscI ACATGT 3 cut(s) 438, 1560, 2324
Psp1406I AACGTT 1 cut(s) 899
Psp6I CCWGG 3 cut(s) 148, 455, 777
PspCI CACGTG 1 cut(s) 1706
PspGI CCWGG 3 cut(s) 148, 455, 777
PspN4I GGNNCC 3 cut(s) 1231, 1619, 2246
PspPI GGNCC 2 cut(s) 221, 998
PsuI RGATCY 2 cut(s) 1079, 1229
RsaI GTAC 5 cut(s) 344, 956, 1148, 1267, 1619
RsaNI GTAC 5 cut(s) 343, 955, 1147, 1266, 1618
RseI CAYNNNNRTG 2 cut(s) 686, 1673
Sau3AI GATC 9 cut(s) 79, 1036, 1079, 1229, 1468, 1497, 1599, 1744, 1807
Sau96I GGNCC 2 cut(s) 221, 998
ScaI AGTACT 1 cut(s) 956
SchI GAGTC 3 cut(s) 203, 943, 1351
ScrFI CCNGG 4 cut(s) 150, 457, 779, 1622
SfaNI GCATC 2 cut(s) 702, 868
SfcI CTRYAG 2 cut(s) 1578, 2104
SinI GGWCC 2 cut(s) 221, 998
SmiMI CAYNNNNRTG 2 cut(s) 686, 1673
SmlI CTYRAG 2 cut(s) 139, 976
SmoI CTYRAG 2 cut(s) 139, 976
SsiI CCGC 1 cut(s) 695
SspMI CTAG 5 cut(s) 527, 797, 1206, 2219, 2249
StyD4I CCNGG 4 cut(s) 148, 455, 777, 1620
StyI CCWWGG 1 cut(s) 1154
TaaI ACNGT 7 cut(s) 869, 1011, 1215, 1804, 1845, 2081, 2270
TaiI ACGT 7 cut(s) 472, 733, 902, 1533, 1708, 1714, 1977
TaqI TCGA 5 cut(s) 197, 507, 1350, 1743, 2277
TatI WGTACW 4 cut(s) 342, 954, 1146, 1265
TfiI GAWTC 6 cut(s) 276, 504, 748, 1371, 1760, 1772
TscAI CASTG 5 cut(s) 345, 1257, 1807, 2149, 2323
TseFI GTSAC 5 cut(s) 32, 1343, 1813, 1970, 2196
Tsp45I GTSAC 5 cut(s) 32, 1343, 1813, 1970, 2196
TspDTI ATGAA 8 cut(s) 17, 504, 513, 670, 1604, 1713, 1890, 2053
TspGWI ACGGA 3 cut(s) 29, 269, 2029
TspRI CASTG 5 cut(s) 345, 1257, 1807, 2149, 2323
Van91I CCANNNNNTGG 2 cut(s) 174, 1335
Vha464I CTTAAG 1 cut(s) 976
VpaK11BI GGWCC 2 cut(s) 221, 998
XapI RAATTY 5 cut(s) 121, 1281, 1897, 2059, 2173
XceI RCATGY 3 cut(s) 442, 1564, 2328
XmiI GTMKAC 2 cut(s) 1108, 1197
XmnI GAANNNNTTC 2 cut(s) 1947, 2243
XspI CTAG 5 cut(s) 527, 797, 1206, 2219, 2249
ZrmI AGTACT 1 cut(s) 956
Zsp2I ATGCAT 2 cut(s) 1244, 2095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.