Rorug06G0170700

Zinc finger MYM-type protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
OG0000215
Physical Location & Seq
Forward (+)
25175200 .. 25177879
2680 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0170700.1

Sequence Viewer

Length: 1698 bp
ATGTCGTCTGTGCCAACTAGTTCTGTATCATTTCCAGTACCACAAATTGCAAAGCCTGAAATCATTCGCCGAACAGCAAATTTTCAACCAAGCATTTGGGGAGATCAGTTCATCAACTATGATTCCCAAAAAACTAAGACTGATCACCTTTGGCAGCAGCAAGTTGACAAATTGAAAACAGTAGTGAAGAGGGAACTCTTTACTAATGAAGGTGATTTTTCACATCGACTCAAGTTAATTGATGCAATCCAACGACTTGGCGTGGCATATCATTTTGAACGTGAAATAGAAGAATCATTGCAACATATCCATGCAACATATCGTGATCGGGATATGTACCATGATGATGGCCATCTTTACGATGTTGCCCTATTGTTTCGGCTTCTAAGGCAACATGGATATCAAATTTCATCTGATATATTCAACAAGTTTAAAGATTCAAATGGTAGCTTCAAAGAATGCTTAATTTCTGACGCCTCCGGTATGCTAAGCCTCTATGAAGCGACACATCTTAGGGTTAATGGAGAAGATATACTTGAAGAGGCTCTTTTGTTCACCACCAATCAACTCAAGTACGTGCTCAAAAGCAATGTACGCTATCCACCAGTATTGAAGGAACAAATAACTGAAGCTTTGACGAGACCTCTTCGAAAAACTTTGGAGAGATTATGTGCCAAGAGTTATATTTCAATCTACCAAGATGAAGCCTCACACAGTGAATCTCTATTGAAACTTGCAAAGTTGGATTTCAATCTTGTTCAGTCTTTACACCAAAAGGAGCTCTCTGATATTACTAGGTGGTGGAAAGAACTAGACTTTGAAAGGAAATTGCCTTTTGCAAGAGACAGGGTGGTGGAGGTGTTCTTTTGGATGGTGGGAGTATATTTTGAACCCCAGTACTCTATTGGCAGAATCATTATGACAAAAGTGGGTATCCTCCTAACTATTTTGGATGATATCTATGATGCATATGGTACATTTGAAGAACTCAAGATCTTCACTCAAGCAATTGACAGGTGGAATGTCAAATGCATAGATGAACTCCCAGACTATTTGAAAATATTCTATCATGAACTTTTGAATCTTTTCGATGAAATTGACAAAGTGATGTCAAAGGAAGGAAGATCATATCGAACTTCATATGCAATAGAAGCTATGAAAGTTCAGGCTCGATCATTTTTCAACGAGGCCCAATGGTTGCACGAAGGTCGCACTCCGAGCATGGAGGAATATATGAGTGTTGCTACAATTTCTGTTACTTACACTTTTATAACAACCATTTCATTACTTGGCATGGGAGATATTGTAACGAAGGATACATTTGAGTGGTTGTTGGATGACCCGAAAATTGTTAGAGCTTCCAATATCATTTTTAGGCTCATGGATGACATTGTTTCCACCAAGTTTGAGAAAGAGAGAGGGCATGCACCTTCTAGCATTGATTGCTATATGAAGCAATATGGTGTTTCAGAACAAGAGACGATTGACGTTTTCGAGAAACAAATTGTGAAATCATGGAAGGATATAAATGAGGAGTTTCTTAAACCAACTGCTATGCCAATGCCGGTTCTTATGCGTGTTCTCAATTTAACAAGAGTAGTGGATCTTCTTTACAAGGGAGAAGATGGATTCACACGAGTTGGGAAGATGACCAAAGATAGTGTTGCTGCAGTTATTATCGACTCAGTGCCACTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF4371 Dimer_Tnp_hAT

Protein Analysis

565

Amino Acids

65.88

Weight (kDa)

5.65

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Terpene_synth PF01397 32 - 212 7.4e-58 Terpene synthase, N-terminal domain
Terpene_synth_C PF03936 269 - 508 6.9e-98 Terpene synthase family, metal binding domain
Terpene_syn_C_2 PF19086 309 - 508 5e-57 Terpene synthase family 2, C-terminal metal binding
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000215)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35150 AT2G06500 AT2G16040 AT2G19960 AT2G19960 AT3G29638 AT3G29794 AT4G10200 AT4G10200 AT5G35475
fragaria_vesca FvH4_1g08455 FvH4_1g08761 FvH4_1g10851 FvH4_1g17271 FvH4_1g26762 FvH4_2g15031 FvH4_2g18762 FvH4_2g29241 FvH4_2g32571 FvH4_4g01531 FvH4_4g12942 FvH4_4g14421 FvH4_4g14431 FvH4_4g14434 FvH4_5g30891 FvH4_6g47641 FvH4_6g47642
malus_domestica MD01G1087700.v1.1 MD11G1104400.v1.1
pyrus_communis pycom05g13550 pycom11g18320
rosa_chinensis RchiOBHm_Chr1g0320361 RchiOBHm_Chr1g0321011 RchiOBHm_Chr1g0321921 RchiOBHm_Chr1g0377611 RchiOBHm_Chr1g0379061 RchiOBHm_Chr2g0106921 RchiOBHm_Chr2g0137341 RchiOBHm_Chr2g0139641 RchiOBHm_Chr2g0139651 RchiOBHm_Chr2g0144921 RchiOBHm_Chr2g0161851 RchiOBHm_Chr2g0172511 RchiOBHm_Chr3g0449931 RchiOBHm_Chr3g0452101 RchiOBHm_Chr3g0480551 RchiOBHm_Chr4g0427821 RchiOBHm_Chr4g0431861 RchiOBHm_Chr4g0435271 RchiOBHm_Chr5g0015121 RchiOBHm_Chr5g0031951 RchiOBHm_Chr5g0034331 RchiOBHm_Chr5g0059431 RchiOBHm_Chr6g0288531 RchiOBHm_Chr6g0308901 RchiOBHm_Chr7g0198801 RchiOBHm_Chr7g0198811 RchiOBHm_Chr7g0200001 RchiOBHm_Chr7g0205811 RchiOBHm_Chr7g0230921 RchiOBHm_Chr7g0233981
rosa_multiflora Rmu_sc0000475.1_g000004 Rmu_sc0000483.1_g000021 Rmu_sc0000551.1_g000007 Rmu_sc0000761.1_g000023 Rmu_sc0000898.1_g000072 Rmu_sc0001921.1_g000031 Rmu_sc0002804.1_g000009 Rmu_sc0002880.1_g000005 Rmu_sc0003207.1_g000046 Rmu_sc0003914.1_g000010 Rmu_sc0004165.1_g000089 Rmu_sc0004209.1_g000001 Rmu_sc0004402.1_g000017 Rmu_sc0004443.1_g000001 Rmu_sc0005506.1_g000007 Rmu_sc0005506.1_g000009 Rmu_sc0006443.1_g000001 Rmu_sc0008191.1_g000019 Rmu_sc0008328.1_g000004 Rmu_sc0009489.1_g000004 Rmu_sc0010368.1_g000012 Rmu_sc0010368.1_g000014 Rmu_sc0011232.1_g000005 Rmu_sc0011630.1_g000006 Rmu_sc0014780.1_g000001 Rmu_sc0028257.1_g000002 Rmu_sc0029902.1_g000001 Rmu_ssc0000386.1_g000041 Rmu_ssc0000434.1_g000020
rosa_roxburghii Rroxscaffold_2G00084750 Rroxscaffold_2G00090380 Rroxscaffold_2G00108310 Rroxscaffold_3G00235050 Rroxscaffold_3G00252220 Rroxscaffold_4G00323580 Rroxscaffold_5G00337920 Rroxscaffold_5G00370050 Rroxscaffold_7G00169180 Rroxscaffold_7G00200470
rosa_rugosa Rorug01G0156600.1 Rorug02G0305900 Rorug02G0362300 Rorug03G0111800 Rorug03G0273500 Rorug03G0340700 Rorug04G0196000 Rorug05G0251300 Rorug05G0465700 Rorug06G0031300 Rorug06G0170700 Rorug07G0226000 Rorug07G0263200
rosa_samantha Rh1CG203400 Rh1CG203500 Rh3AG212700 Rh3BG246300 Rh4BG318100 Rh6BG118800 Rh6DG105400 Rh7DG231500
rosa_wichuraiana Rw1G002740 Rw1G016740 Rw2G009190 Rw2G021330 Rw2G030170 Rw2G034650 Rw2G034990 Rw2G046190 Rw3G019490 Rw3G019500 Rw3G019510 Rw3G019990 Rw3G020480 Rw3G026090 Rw4G005490 Rw4G007090 Rw4G022920 Rw4G030140 Rw5G011030 Rw5G019330 Rw5G027260 Rw5G029990 Rw5G034080 Rw6G025080 Rw6G031390 Rw6G038690 Rw7G016630

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1271
AclWI GGATC 1 cut(s) 1611
AcoI YGGCCR 1 cut(s) 349
AcsI RAATTY 2 cut(s) 79, 405
AcuI CTGAAG 1 cut(s) 648
AcyI GRCGYC 1 cut(s) 474
AdeI CACNNNGTG 1 cut(s) 716
AfaI GTAC 6 cut(s) 39, 338, 575, 594, 899, 976
AhlI ACTAGT 1 cut(s) 17
AluBI AGCT 5 cut(s) 450, 632, 781, 1154, 1358
AluI AGCT 5 cut(s) 450, 632, 781, 1154, 1358
Alw21I GWGCWC 2 cut(s) 582, 783
Alw26I GTCTC 3 cut(s) 634, 837, 1472
AlwI GGATC 1 cut(s) 1611
AoxI GGCC 2 cut(s) 349, 1188
ApeKI GCWGC 3 cut(s) 154, 157, 1667
ApoI RAATTY 2 cut(s) 79, 405
Asp700I GAANNNNTTC 3 cut(s) 63, 1061, 1085
AspS9I GGNCC 1 cut(s) 1189
AsuHPI GGTGA 3 cut(s) 137, 224, 547
AsuII TTCGAA 1 cut(s) 649
BalI TGGCCA 1 cut(s) 351
BanII GRGCYC 1 cut(s) 783
BarI GAAGNNNNNNTAC 2 cut(s) 1590, 1622
BauI CACGAG 1 cut(s) 1635
Bbv12I GWGCWC 2 cut(s) 582, 783
BbvI GCAGC 3 cut(s) 166, 169, 1654
BccI CCATC 4 cut(s) 341, 360, 865, 1619
BcgI CGANNNNNNTGC 2 cut(s) 1190, 1224
BciVI GTATCC 2 cut(s) 944, 1309
BclI TGATCA 1 cut(s) 142
BcoDI GTCTC 3 cut(s) 634, 837, 1472
BcuI ACTAGT 1 cut(s) 17
BfaI CTAG 4 cut(s) 18, 795, 812, 1434
BfmI CTRYAG 1 cut(s) 1668
BfuI GTATCC 2 cut(s) 944, 1309
BglII AGATCT 1 cut(s) 993
BisI GCNGC 3 cut(s) 155, 158, 1668
BlpI GCTNAGC 1 cut(s) 488
BlsI GCNGC 3 cut(s) 156, 159, 1669
BmcAI AGTACT 1 cut(s) 899
BmgT120I GGNCC 1 cut(s) 1189
BmrI ACTGGG 1 cut(s) 889
BmsI GCATC 2 cut(s) 232, 955
BmuI ACTGGG 1 cut(s) 889
Bpu1102I GCTNAGC 1 cut(s) 488
Bpu14I TTCGAA 1 cut(s) 649
BpuEI CTTGAG 4 cut(s) 215, 554, 974, 987
BsaAI YACGTR 1 cut(s) 577
BsaBI GATNNNNATC 2 cut(s) 351, 750
BsaHI GRCGYC 1 cut(s) 474
BsaI GGTCTC 1 cut(s) 634
BsaWI WCCGGW 1 cut(s) 479
BsaXI ACNNNNNCTCC 2 cut(s) 1290, 1320
Bse118I RCCGGY 1 cut(s) 1564
Bse1I ACTGG 3 cut(s) 35, 605, 895
Bse3DI GCAATG 2 cut(s) 296, 595
Bse8I GATNNNNATC 2 cut(s) 351, 750
BseGI GGATG 4 cut(s) 876, 958, 1342, 1390
BseJI GATNNNNATC 2 cut(s) 351, 750
BseMI GCAATG 2 cut(s) 296, 595
BseMII CTCAG 1 cut(s) 1698
BseNI ACTGG 3 cut(s) 35, 605, 895
BseRI GAGGAG 1 cut(s) 1547
BseXI GCAGC 3 cut(s) 166, 169, 1654
BshFI GGCC 2 cut(s) 351, 1190
BsiHKAI GWGCWC 2 cut(s) 582, 783
BsiSI CCGG 2 cut(s) 480, 1565
BsmAI GTCTC 3 cut(s) 634, 837, 1472
BsmBI CGTCTC 1 cut(s) 1472
BsmI GAATGC 1 cut(s) 464
BsnI GGCC 2 cut(s) 351, 1190
Bso31I GGTCTC 1 cut(s) 634
Bsp119I TTCGAA 1 cut(s) 649
Bsp1286I GDGCHC 2 cut(s) 582, 783
Bsp143I GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
Bsp1720I GCTNAGC 1 cut(s) 488
BspANI GGCC 2 cut(s) 351, 1190
BspCNI CTCAG 1 cut(s) 1697
BspHI TCATGA 1 cut(s) 1069
BspMAI CTGCAG 1 cut(s) 1672
BspPI GGATC 1 cut(s) 1611
BspT104I TTCGAA 1 cut(s) 649
BspTNI GGTCTC 1 cut(s) 634
BsrDI GCAATG 2 cut(s) 296, 595
BsrFI RCCGGY 1 cut(s) 1564
BsrI ACTGG 3 cut(s) 35, 605, 895
BssAI RCCGGY 1 cut(s) 1564
BssMI GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
BssNI GRCGYC 1 cut(s) 474
BssSI CACGAG 1 cut(s) 1635
Bst2BI CACGAG 1 cut(s) 1635
Bst4CI ACNGT 3 cut(s) 181, 716, 1695
Bst6I CTCTTC 3 cut(s) 182, 534, 651
BstACI GRCGYC 1 cut(s) 474
BstAPI GCANNNNNTGC 1 cut(s) 1443
BstBAI YACGTR 1 cut(s) 577
BstBI TTCGAA 1 cut(s) 649
BstC8I GCNNGC 1 cut(s) 1425
BstDEI CTNAG 5 cut(s) 135, 386, 488, 512, 1684
BstF5I GGATG 4 cut(s) 876, 958, 1342, 1390
BstKTI GATC 7 cut(s) 106, 145, 328, 996, 1127, 1175, 1606
BstMAI GTCTC 3 cut(s) 634, 837, 1472
BstMBI GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
BstMWI GCNNNNNNNGC 5 cut(s) 388, 594, 1151, 1218, 1443
BstNSI RCATGY 1 cut(s) 1427
BstSFI CTRYAG 1 cut(s) 1668
BstV1I GCAGC 3 cut(s) 166, 169, 1654
BstX2I RGATCY 2 cut(s) 993, 1603
BstXI CCANNNNNNTGG 3 cut(s) 96, 257, 347
BstYI RGATCY 2 cut(s) 993, 1603
BsuI GTATCC 2 cut(s) 944, 1309
BsuRI GGCC 2 cut(s) 351, 1190
BtsCI GGATG 4 cut(s) 876, 958, 1342, 1390
BtsIMutI CAGTG 3 cut(s) 721, 1691, 1692
Cac8I GCNNGC 1 cut(s) 1425
CciI TCATGA 1 cut(s) 1069
Cfr10I RCCGGY 1 cut(s) 1564
Cfr13I GGNCC 1 cut(s) 1189
CseI GACGC 1 cut(s) 482
Csp6I GTAC 6 cut(s) 38, 337, 574, 593, 898, 975
CspCI CAANNNNNGTGG 6 cut(s) 591, 626, 1387, 1422, 1581, 1616
CviAII CATG 9 cut(s) 311, 341, 395, 1070, 1222, 1294, 1381, 1424, 1515
CviQI GTAC 6 cut(s) 38, 337, 574, 593, 898, 975
DdeI CTNAG 5 cut(s) 135, 386, 488, 512, 1684
DpnI GATC 7 cut(s) 105, 144, 327, 995, 1126, 1174, 1605
DpnII GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
DraI TTTAAA 1 cut(s) 433
DraIII CACNNNGTG 1 cut(s) 716
EaeI YGGCCR 1 cut(s) 349
Eam1104I CTCTTC 3 cut(s) 182, 534, 651
EarI CTCTTC 3 cut(s) 182, 534, 651
Ecl136II GAGCTC 1 cut(s) 781
Eco24I GRGCYC 1 cut(s) 783
Eco31I GGTCTC 1 cut(s) 634
Eco32I GATATC 2 cut(s) 401, 958
Eco53kI GAGCTC 1 cut(s) 781
Eco57I CTGAAG 1 cut(s) 648
EcoICRI GAGCTC 1 cut(s) 781
EcoRV GATATC 2 cut(s) 401, 958
EcoT22I ATGCAT 2 cut(s) 970, 1034
EcoT38I GRGCYC 1 cut(s) 783
Esp3I CGTCTC 1 cut(s) 1472
FaeI CATG 9 cut(s) 314, 344, 398, 1073, 1225, 1297, 1384, 1427, 1518
FalI AAGNNNNNCTT 4 cut(s) 519, 551, 531, 563
FatI CATG 9 cut(s) 310, 340, 394, 1069, 1221, 1293, 1380, 1423, 1514
FauNDI CATATG 2 cut(s) 970, 1141
FbaI TGATCA 1 cut(s) 142
Fnu4HI GCNGC 3 cut(s) 155, 158, 1668
FokI GGATG 4 cut(s) 883, 965, 1349, 1397
FriOI GRGCYC 1 cut(s) 783
Fsp4HI GCNGC 3 cut(s) 155, 158, 1668
FspBI CTAG 4 cut(s) 18, 795, 812, 1434
GluI GCNGC 3 cut(s) 155, 158, 1668
HaeIII GGCC 2 cut(s) 351, 1190
HapII CCGG 2 cut(s) 480, 1565
HgaI GACGC 1 cut(s) 482
Hin1I GRCGYC 1 cut(s) 474
Hin1II CATG 9 cut(s) 314, 344, 398, 1073, 1225, 1297, 1384, 1427, 1518
HincII GTYRAC 1 cut(s) 166
HindII GTYRAC 1 cut(s) 166
HindIII AAGCTT 1 cut(s) 630
HinfI GANTC 9 cut(s) 122, 228, 293, 437, 719, 912, 1081, 1629, 1682
HpaII CCGG 2 cut(s) 480, 1565
HphI GGTGA 3 cut(s) 137, 224, 547
Hpy166II GTNNAC 2 cut(s) 166, 555
Hpy188I TCNGA 5 cut(s) 415, 472, 787, 1218, 1471
Hpy188III TCNNGA 5 cut(s) 323, 329, 991, 1070, 1495
Hpy8I GTNNAC 2 cut(s) 166, 555
HpyAV CCTTC 7 cut(s) 203, 607, 1112, 1199, 1306, 1440, 1513
HpyCH4III ACNGT 3 cut(s) 181, 716, 1695
HpyCH4IV ACGT 3 cut(s) 280, 576, 1488
HpyF10VI GCNNNNNNNGC 5 cut(s) 388, 594, 1151, 1218, 1443
HpyF3I CTNAG 5 cut(s) 135, 386, 488, 512, 1684
HpySE526I ACGT 3 cut(s) 280, 576, 1488
Hsp92I GRCGYC 1 cut(s) 474
Hsp92II CATG 9 cut(s) 314, 344, 398, 1073, 1225, 1297, 1384, 1427, 1518
Ksp22I TGATCA 1 cut(s) 142
Kzo9I GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
LmnI GCTCC 1 cut(s) 778
Lsp1109I GCAGC 3 cut(s) 166, 169, 1654
LweI GCATC 2 cut(s) 232, 955
MaeI CTAG 4 cut(s) 18, 795, 812, 1434
MaeII ACGT 3 cut(s) 280, 576, 1488
MaeIII GTNAC 2 cut(s) 1255, 1306
MalI GATC 7 cut(s) 105, 144, 327, 995, 1126, 1174, 1605
MboI GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
MfeI CAATTG 1 cut(s) 1008
MflI RGATCY 2 cut(s) 993, 1603
MhlI GDGCHC 2 cut(s) 582, 783
MlsI TGGCCA 1 cut(s) 351
MluNI TGGCCA 1 cut(s) 351
MlyI GAGTC 2 cut(s) 222, 1676
MmeI TCCRAC 3 cut(s) 274, 723, 1314
Mox20I TGGCCA 1 cut(s) 351
Mph1103I ATGCAT 2 cut(s) 970, 1034
MroXI GAANNNNTTC 3 cut(s) 63, 1061, 1085
MscI TGGCCA 1 cut(s) 351
MseI TTAA 6 cut(s) 236, 432, 464, 519, 1542, 1589
MslI CAYNNNNRTG 3 cut(s) 309, 345, 1324
Msp20I TGGCCA 1 cut(s) 351
MspI CCGG 2 cut(s) 480, 1565
MunI CAATTG 1 cut(s) 1008
Mva1269I GAATGC 1 cut(s) 464
MwoI GCNNNNNNNGC 5 cut(s) 388, 594, 1151, 1218, 1443
NdeI CATATG 2 cut(s) 970, 1141
NdeII GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
NlaIII CATG 9 cut(s) 314, 344, 398, 1073, 1225, 1297, 1384, 1427, 1518
NsiI ATGCAT 2 cut(s) 970, 1034
NspI RCATGY 1 cut(s) 1427
NspV TTCGAA 1 cut(s) 649
PaeI GCATGC 1 cut(s) 1427
PagI TCATGA 1 cut(s) 1069
PctI GAATGC 1 cut(s) 464
PdmI GAANNNNTTC 3 cut(s) 63, 1061, 1085
PfeI GAWTC 7 cut(s) 122, 293, 437, 719, 912, 1081, 1629
PkrI GCNGC 3 cut(s) 156, 159, 1669
PleI GAGTC 2 cut(s) 222, 1676
PpsI GAGTC 2 cut(s) 222, 1676
Ppu21I YACGTR 1 cut(s) 577
PsiI TTATAA 1 cut(s) 1271
Psp124BI GAGCTC 1 cut(s) 783
PspPI GGNCC 1 cut(s) 1189
PstI CTGCAG 1 cut(s) 1672
PsuI RGATCY 2 cut(s) 993, 1603
RsaI GTAC 6 cut(s) 39, 338, 575, 594, 899, 976
RsaNI GTAC 6 cut(s) 38, 337, 574, 593, 898, 975
RseI CAYNNNNRTG 3 cut(s) 309, 345, 1324
SacI GAGCTC 1 cut(s) 783
SaqAI TTAA 6 cut(s) 236, 432, 464, 519, 1542, 1589
SatI GCNGC 3 cut(s) 155, 158, 1668
Sau3AI GATC 7 cut(s) 103, 142, 325, 993, 1124, 1172, 1603
Sau96I GGNCC 1 cut(s) 1189
ScaI AGTACT 1 cut(s) 899
SchI GAGTC 2 cut(s) 222, 1676
SduI GDGCHC 2 cut(s) 582, 783
SfaNI GCATC 2 cut(s) 232, 955
SfcI CTRYAG 1 cut(s) 1668
SfuI TTCGAA 1 cut(s) 649
SmiMI CAYNNNNRTG 3 cut(s) 309, 345, 1324
SmlI CTYRAG 4 cut(s) 230, 569, 989, 1002
SmoI CTYRAG 4 cut(s) 230, 569, 989, 1002
SpeI ACTAGT 1 cut(s) 17
SphI GCATGC 1 cut(s) 1427
SspI AATATT 1 cut(s) 1062
SspMI CTAG 4 cut(s) 18, 795, 812, 1434
SstI GAGCTC 1 cut(s) 783
TaaI ACNGT 3 cut(s) 181, 716, 1695
TaiI ACGT 3 cut(s) 283, 579, 1491
TaqI TCGA 7 cut(s) 226, 649, 1089, 1132, 1171, 1494, 1680
TatI WGTACW 1 cut(s) 897
TfiI GAWTC 7 cut(s) 122, 293, 437, 719, 912, 1081, 1629
Tru1I TTAA 6 cut(s) 236, 432, 464, 519, 1542, 1589
Tru9I TTAA 6 cut(s) 236, 432, 464, 519, 1542, 1589
TscAI CASTG 3 cut(s) 721, 1692, 1698
TseI GCWGC 3 cut(s) 154, 157, 1667
TspRI CASTG 3 cut(s) 721, 1692, 1698
XapI RAATTY 2 cut(s) 79, 405
XceI RCATGY 1 cut(s) 1427
XcmI CCANNNNNNNNNTGG 1 cut(s) 902
XmnI GAANNNNTTC 3 cut(s) 63, 1061, 1085
XspI CTAG 4 cut(s) 18, 795, 812, 1434
ZrmI AGTACT 1 cut(s) 899
Zsp2I ATGCAT 2 cut(s) 970, 1034
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.