FvH4_1g29141

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000269
Physical Location & Seq
Forward (+)
21785807 .. 21788583
2777 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g29141.t1

Sequence Viewer

Length: 2268 bp
ATGGCTAGATCGAAGATCCGCACCCGAAACCCGGCCTTTCCTAGCCGGCTGAGTCAGAGGCTTGATAAATCGGCCTCTTCTACCGAAACGGATGACACCTCCAATCCATCGAAGAGGGCTCGACCATCGCCAACTGATGGTGTAGATGCCTCTGCCTCTGTTCCCGGATCGTCGTCTGAGGCTGCGCGCATGAACGATTCCCAACGTGGACCTGTATCTTCACTGGAAGAGGGCCAGATTCCCAAGACGGGGTCGAAACGAGGGGGCGACGTGTGTCAACCAATAGAGGAAGGAGACGAAGACGAGGAGGATAATGAAGATCACCGTGAAGAGGGAGAAGATCATTTTGATGATGCGAAAGGGCAACTGGCTGGCGACCGTGTGGTCTTCCGGAAGAGGAATAAAGTCACCGGGAAACAACTGAGTTTCTTCAACTACGTGGAATGTGCCGAAGAACCAAGTTCACGACTTCAAGTTGAGCCTATCTCAGAAATGGAAGGAACTTCCGCCGGAAGAGAAGGCAAATTACGTCCACCTGATAAAGAGGGTTACTCGTCAGCTTCTTATTCCGAGGGAAGTGCGCCAGCGGTCTACAAGGTAGACACTCGCACATCTCTGCACCGGTTCAAGAGTTTGATCGGAGAGTTCAATGAAGAGAAGTTAGCTGCTTGCAGGGAGCTCGGTTTTGGCCCTCTCTTGAAGTTGGCTATTACTAAGATGCACCTTTCCATTTTGAGGCTCATAGTTGATGCCACTAGCGCCTCAGATAAAAGTATAACTATGCATGGGACCAAGCTTCCACTCTCAGCCAATGATGTGGAGAATGTGATGGGTTTGAAGAATGGCGGATCCCCGATTGTCTTTGAGGGGCATGTGAAAGATTATACGGAGTTGGAGGCCACTGCAAATGAGATGGCAGGGCCTGACCACAAGATCCAACTCGCCAAGGTTGAGGCGTACTTGAAGGAGACGCAATTGGTGGATGACAAATTCAAGCGACTGTTTATTTTGTTCACCATGAGCACCATCATTTCCCCAACCGCTAGCCTTTCTATTCCCAAGAAGTGGCTGCTTTGTGCGAGAAACCCCGTGGACTGTGCTTCGAAGAATTGGGCTGAGTATGTTTTCGATTCGCTGATGGCCGGCATTTCTGAATTTCAGCAAAGGGAAAACGGTGCAAAGACAAGTGGGAAATTTTGCAGCGGCTGCCTATTGTTTCTTGAGCTCTTCCATTTTGATTGTGTCGGTCATGAGAAACACTTTGTCGATAGGTCTTTGTACCCAATTGAGGCATGGGGGGACAAAGAAGTAGGCAGAGTATTGAAATACATCAATCAGTTGGGGGGTATGCTTGACTCGCGGGTTGGTTGGAAGAAGGTTGGGGGGCGTGTGCGCACGGACGATGTTGCACCCGGGGTTAGTAGGCAGGAGTTCGATTTGGCGATGGGTAGAGTCGGTCGATTGGAAGACCAAGTGCGCAACATAGGGGCAGAAATGGGGCAAGGTTTTGCTGCCATCATTAGTAGGCTCGACTCCATGGGTGCAGCAGGTCCATCAAAGGCAAAAGGGAGAGGGAAGAAGAAAGAGTGTAATGTGTTGGAACAATGGAACCCCTTGAACAATGTTGAAATCCATAAGGCCACTTTGTTGTTGTGTCCTGGCCAGGTTATGGTTATGGTCATTGAAAGCACTTGGTTATGGTTGGTACCGGTAGATTTGGACCGGTCACCACCGAAAAAGAAAGTCACGGTCATCCTCTCGGACTCGACGTCGATTGTGAGCCCCGAGAAAAAAGATATCCCCAAATCTAATCCCTTTGAGGGGAAGAATAGAAGGATTAATATTGGCTCATTTCGTGTCTATGGTGACGGAGATGTGATTGACAAAGGCGTAGTTACAAACGTATGCGACCCATGCTCGGCCCAAGAACTTGTCGAGAAGATTGTGCTCAGCACAACCGGCGACATATGGGCTACTAGAAAACATATTAAGACACTACAACCAAACCAATGGGTTGTGGATGATGTCATCAACATGTTTTCGAACTATCTTAACCAAGAACAAAATGAGAGAGATAAAACTCCGAGGTCACACTTCTTGGATACTTGCTTTGCTCAAAAGATACAAAGTCATTTGGAGGGGGTAAGCAAAGGTCTTCTTACGGGTTTTCCATCGAAAAGGAGTTTGGGTATGAGATCCCTCCAGAAAACAATTGTACAATGTGACAAGGTAATTCTTACCACCTATCCTGTTCGTTTATCAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

756

Amino Acids

83.5

Weight (kDa)

7.19

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 383
AatII GACGTC 1 cut(s) 1772
Acc16I TGCGCA 2 cut(s) 1394, 1478
Acc36I ACCTGC 1 cut(s) 1538
Acc65I GGTACC 1 cut(s) 1705
AccB1I GGYRCC 1 cut(s) 1705
AccB7I CCANNNNNTGG 3 cut(s) 137, 1065, 1669
AccI GTMKAC 2 cut(s) 591, 600
AccII CGCG 2 cut(s) 187, 1360
AccIII TCCGGA 1 cut(s) 390
AciI CCGC 7 cut(s) 19, 507, 587, 846, 1041, 1203, 1360
AclWI GGATC 6 cut(s) 10, 175, 843, 856, 928, 2190
AcoI YGGCCR 2 cut(s) 1140, 1660
AcsI RAATTY 3 cut(s) 989, 1154, 1193
AcyI GRCGYC 1 cut(s) 1769
AfaI GTAC 4 cut(s) 959, 1280, 1707, 2217
AflIII ACRYGT 2 cut(s) 270, 2034
AgeI ACCGGT 3 cut(s) 621, 1708, 1722
AhdI GACNNNNNGTC 1 cut(s) 1768
AjiI CACGTC 1 cut(s) 271
AjnI CCWGG 2 cut(s) 1657, 1662
AjuI GAANNNNNNNTTGG 2 cut(s) 2168, 2200
AluBI AGCT 5 cut(s) 560, 665, 679, 796, 1225
AluI AGCT 5 cut(s) 560, 665, 679, 796, 1225
Alw21I GWGCWC 4 cut(s) 681, 1025, 1227, 1950
Alw26I GTCTC 2 cut(s) 288, 962
AlwI GGATC 6 cut(s) 10, 175, 843, 856, 928, 2190
AlwNI CAGNNNCTG 2 cut(s) 923, 1206
Ama87I CYCGRG 2 cut(s) 1412, 1784
Aor13HI TCCGGA 1 cut(s) 390
ApeKI GCWGC 7 cut(s) 182, 665, 1069, 1200, 1206, 1511, 1544
ApoI RAATTY 3 cut(s) 989, 1154, 1193
AseI ATTAAT 1 cut(s) 1839
AsiGI ACCGGT 3 cut(s) 621, 1708, 1722
Asp718I GGTACC 1 cut(s) 1705
AspLEI GCGC 6 cut(s) 187, 189, 583, 761, 1395, 1479
AspS9I GGNCC 8 cut(s) 209, 232, 689, 789, 920, 1550, 1720, 1921
AsuC2I CCSGG 5 cut(s) 32, 165, 412, 1413, 1414
AsuHPI GGTGA 5 cut(s) 314, 400, 1006, 1719, 1877
AsuII TTCGAA 2 cut(s) 1103, 2042
AsuNHI GCTAGC 1 cut(s) 1043
AvaI CYCGRG 2 cut(s) 1412, 1784
AvaII GGWCC 4 cut(s) 209, 789, 1550, 1720
BalI TGGCCA 1 cut(s) 1662
BamHI GGATCC 1 cut(s) 848
BanI GGYRCC 1 cut(s) 1705
BanII GRGCYC 4 cut(s) 121, 681, 1227, 1784
BarI GAAGNNNNNNTAC 2 cut(s) 510, 542
BbsI GAAGAC 4 cut(s) 306, 379, 1473, 2147
Bbv12I GWGCWC 4 cut(s) 681, 1025, 1227, 1950
BbvI GCAGC 7 cut(s) 169, 652, 1056, 1193, 1212, 1498, 1556
BcgI CGANNNNNNTGC 4 cut(s) 560, 594, 661, 695
BciT130I CCWGG 2 cut(s) 1659, 1664
BciVI GTATCC 1 cut(s) 2095
BcnI CCSGG 5 cut(s) 32, 165, 412, 1413, 1414
BcoDI GTCTC 2 cut(s) 288, 962
BfaI CTAG 5 cut(s) 6, 42, 756, 1044, 1977
BfoI RGCGCY 1 cut(s) 762
BfuAI ACCTGC 1 cut(s) 1538
BfuI GTATCC 1 cut(s) 2095
BisI GCNGC 8 cut(s) 183, 666, 1070, 1201, 1204, 1207, 1512, 1545
BlpI GCTNAGC 1 cut(s) 1949
BlsI GCNGC 8 cut(s) 184, 667, 1071, 1202, 1205, 1208, 1513, 1546
Bme1390I CCNGG 7 cut(s) 32, 165, 412, 1413, 1414, 1659, 1664
Bme18I GGWCC 4 cut(s) 209, 789, 1550, 1720
BmeRI GACNNNNNGTC 1 cut(s) 1768
BmeT110I CYCGRG 2 cut(s) 1412, 1784
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 8 cut(s) 209, 232, 689, 789, 920, 1550, 1720, 1921
BmiI GGNNCC 4 cut(s) 790, 850, 1610, 1707
BmrFI CCNGG 7 cut(s) 32, 165, 412, 1413, 1414, 1659, 1664
BmsI GCATC 4 cut(s) 136, 343, 708, 739
BmtI GCTAGC 1 cut(s) 1047
BoxI GACNNNNGTC 1 cut(s) 273
BpiI GAAGAC 4 cut(s) 306, 379, 1473, 2147
BplI GAGNNNNNCTC 4 cut(s) 470, 502, 536, 568
BpmI CTGGAG 1 cut(s) 2186
Bpu1102I GCTNAGC 1 cut(s) 1949
Bpu14I TTCGAA 2 cut(s) 1103, 2042
BpuEI CTTGAG 1 cut(s) 1241
BpuMI CCSGG 5 cut(s) 32, 165, 412, 1413, 1414
BsaAI YACGTR 1 cut(s) 439
BsaHI GRCGYC 1 cut(s) 1769
BsaJI CCNNGG 7 cut(s) 570, 945, 1089, 1412, 1413, 1536, 2084
BsaWI WCCGGW 4 cut(s) 390, 621, 1708, 1722
BsaXI ACNNNNNCTCC 2 cut(s) 2173, 2203
Bse118I RCCGGY 6 cut(s) 45, 621, 1142, 1708, 1722, 1958
Bse1I ACTGG 2 cut(s) 228, 372
BseAI TCCGGA 1 cut(s) 390
BseBI CCWGG 2 cut(s) 1659, 1664
BseDI CCNNGG 7 cut(s) 570, 945, 1089, 1412, 1413, 1536, 2084
BseGI GGATG 4 cut(s) 97, 988, 1752, 2026
BseMII CTCAG 8 cut(s) 41, 168, 413, 501, 777, 819, 1107, 1963
BseNI ACTGG 2 cut(s) 228, 372
BsePI GCGCGC 1 cut(s) 185
BseRI GAGGAG 1 cut(s) 320
BseXI GCAGC 7 cut(s) 169, 652, 1056, 1193, 1212, 1498, 1556
BsgI GTGCAG 2 cut(s) 602, 1563
Bsh1236I CGCG 2 cut(s) 187, 1360
Bsh1285I CGRYCG 2 cut(s) 379, 1459
BshNI GGYRCC 1 cut(s) 1705
BshTI ACCGGT 3 cut(s) 621, 1708, 1722
BsiEI CGRYCG 2 cut(s) 379, 1459
BsiHKAI GWGCWC 4 cut(s) 681, 1025, 1227, 1950
BsiHKCI CYCGRG 2 cut(s) 1412, 1784
BslFI GGGAC 2 cut(s) 802, 1313
BsmAI GTCTC 2 cut(s) 288, 962
BsmBI CGTCTC 2 cut(s) 288, 962
BsmFI GGGAC 2 cut(s) 802, 1313
BsoBI CYCGRG 2 cut(s) 1412, 1784
Bsp119I TTCGAA 2 cut(s) 1103, 2042
Bsp1286I GDGCHC 6 cut(s) 121, 681, 1025, 1227, 1784, 1950
Bsp13I TCCGGA 1 cut(s) 390
Bsp1407I TGTACA 1 cut(s) 2215
Bsp143I GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
Bsp1720I GCTNAGC 1 cut(s) 1949
Bsp19I CCATGG 1 cut(s) 1536
BspACI CCGC 7 cut(s) 19, 507, 587, 846, 1041, 1203, 1360
BspCNI CTCAG 8 cut(s) 42, 169, 414, 500, 776, 818, 1108, 1962
BspEI TCCGGA 1 cut(s) 390
BspFNI CGCG 2 cut(s) 187, 1360
BspHI TCATGA 1 cut(s) 1249
BspLI GGNNCC 4 cut(s) 790, 850, 1610, 1707
BspMI ACCTGC 1 cut(s) 1538
BspOI GCTAGC 1 cut(s) 1047
BspPI GGATC 6 cut(s) 10, 175, 843, 856, 928, 2190
BspQI GCTCTTC 1 cut(s) 1232
BspT104I TTCGAA 2 cut(s) 1103, 2042
BspT107I GGYRCC 1 cut(s) 1705
BsrFI RCCGGY 6 cut(s) 45, 621, 1142, 1708, 1722, 1958
BsrGI TGTACA 1 cut(s) 2215
BsrI ACTGG 2 cut(s) 228, 372
BssAI RCCGGY 6 cut(s) 45, 621, 1142, 1708, 1722, 1958
BssECI CCNNGG 7 cut(s) 570, 945, 1089, 1412, 1413, 1536, 2084
BssHII GCGCGC 1 cut(s) 185
BssMI GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
BssNI GRCGYC 1 cut(s) 1769
BssT1I CCWWGG 2 cut(s) 945, 1536
Bst2UI CCWGG 2 cut(s) 1659, 1664
Bst4CI ACNGT 6 cut(s) 326, 380, 1002, 1097, 1175, 1750
Bst6I CTCTTC 8 cut(s) 82, 107, 222, 324, 389, 508, 648, 1232
BstACI GRCGYC 1 cut(s) 1769
BstAPI GCANNNNNTGC 1 cut(s) 1206
BstAUI TGTACA 1 cut(s) 2215
BstBAI YACGTR 1 cut(s) 439
BstBI TTCGAA 2 cut(s) 1103, 2042
BstC8I GCNNGC 7 cut(s) 47, 187, 373, 585, 670, 1045, 1144
BstDEI CTNAG 9 cut(s) 50, 177, 422, 487, 714, 763, 805, 1116, 1949
BstDSI CCRYGG 2 cut(s) 1089, 1536
BstEII GGTNACC 1 cut(s) 1725
BstF5I GGATG 4 cut(s) 97, 988, 1752, 2026
BstFNI CGCG 2 cut(s) 187, 1360
BstH2I RGCGCY 1 cut(s) 762
BstHHI GCGC 6 cut(s) 187, 189, 583, 761, 1395, 1479
BstKTI GATC 9 cut(s) 11, 18, 170, 322, 343, 639, 851, 936, 2198
BstMAI GTCTC 2 cut(s) 288, 962
BstMBI GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
BstMCI CGRYCG 2 cut(s) 379, 1459
BstMWI GCNNNNNNNGC 5 cut(s) 758, 1206, 1357, 1914, 1959
BstNI CCWGG 2 cut(s) 1659, 1664
BstNSI RCATGY 2 cut(s) 875, 2038
BstPAI GACNNNNGTC 1 cut(s) 273
BstPI GGTNACC 1 cut(s) 1725
BstSCI CCNGG 7 cut(s) 30, 163, 410, 1411, 1412, 1657, 1662
BstUI CGCG 2 cut(s) 187, 1360
BstV1I GCAGC 7 cut(s) 169, 652, 1056, 1193, 1212, 1498, 1556
BstV2I GAAGAC 4 cut(s) 306, 379, 1473, 2147
BstX2I RGATCY 4 cut(s) 15, 848, 933, 2195
BstXI CCANNNNNNTGG 2 cut(s) 817, 2010
BstYI RGATCY 4 cut(s) 15, 848, 933, 2195
BsuI GTATCC 1 cut(s) 2095
BtgI CCRYGG 2 cut(s) 1089, 1536
BtgZI GCGATG 2 cut(s) 111, 1457
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 4 cut(s) 97, 988, 1752, 2026
BtsI GCAGTG 1 cut(s) 900
BtsIMutI CAGTG 2 cut(s) 221, 900
BveI ACCTGC 1 cut(s) 1538
Cac8I GCNNGC 7 cut(s) 47, 187, 373, 585, 670, 1045, 1144
CaiI CAGNNNCTG 2 cut(s) 923, 1206
CciI TCATGA 1 cut(s) 1249
CfoI GCGC 6 cut(s) 187, 189, 583, 761, 1395, 1479
Cfr10I RCCGGY 6 cut(s) 45, 621, 1142, 1708, 1722, 1958
Cfr13I GGNCC 8 cut(s) 209, 232, 689, 789, 920, 1550, 1720, 1921
Cfr9I CCCGGG 1 cut(s) 1412
CseI GACGC 1 cut(s) 979
Csp6I GTAC 4 cut(s) 958, 1279, 1706, 2216
CspAI ACCGGT 3 cut(s) 621, 1708, 1722
CviAII CATG 9 cut(s) 190, 785, 872, 1018, 1250, 1293, 1537, 1914, 2035
CviQI GTAC 4 cut(s) 958, 1279, 1706, 2216
DdeI CTNAG 9 cut(s) 50, 177, 422, 487, 714, 763, 805, 1116, 1949
DpnI GATC 9 cut(s) 10, 17, 169, 321, 342, 638, 850, 935, 2197
DpnII GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
DrdI GACNNNNNNGTC 1 cut(s) 383
DriI GACNNNNNGTC 1 cut(s) 1768
DseDI GACNNNNNNGTC 1 cut(s) 383
EaeI YGGCCR 2 cut(s) 1140, 1660
Eam1104I CTCTTC 8 cut(s) 82, 107, 222, 324, 389, 508, 648, 1232
Eam1105I GACNNNNNGTC 1 cut(s) 1768
EarI CTCTTC 8 cut(s) 82, 107, 222, 324, 389, 508, 648, 1232
EciI GGCGGA 2 cut(s) 496, 861
Ecl136II GAGCTC 2 cut(s) 679, 1225
Eco130I CCWWGG 2 cut(s) 945, 1536
Eco24I GRGCYC 4 cut(s) 121, 681, 1227, 1784
Eco32I GATATC 1 cut(s) 1798
Eco47I GGWCC 4 cut(s) 209, 789, 1550, 1720
Eco53kI GAGCTC 2 cut(s) 679, 1225
Eco88I CYCGRG 2 cut(s) 1412, 1784
Eco91I GGTNACC 1 cut(s) 1725
EcoICRI GAGCTC 2 cut(s) 679, 1225
EcoO109I RGGNCCY 1 cut(s) 920
EcoO65I GGTNACC 1 cut(s) 1725
EcoRII CCWGG 2 cut(s) 1657, 1662
EcoRV GATATC 1 cut(s) 1798
EcoT14I CCWWGG 2 cut(s) 945, 1536
EcoT22I ATGCAT 1 cut(s) 786
EcoT38I GRGCYC 4 cut(s) 121, 681, 1227, 1784
ErhI CCWWGG 2 cut(s) 945, 1536
Esp3I CGTCTC 2 cut(s) 288, 962
FaeI CATG 9 cut(s) 193, 788, 875, 1021, 1253, 1296, 1540, 1917, 2038
FalI AAGNNNNNCTT 2 cut(s) 2142, 2174
FaqI GGGAC 2 cut(s) 802, 1313
FatI CATG 9 cut(s) 189, 784, 871, 1017, 1249, 1292, 1536, 1913, 2034
FauI CCCGC 1 cut(s) 1353
FauNDI CATATG 1 cut(s) 1967
FblI GTMKAC 2 cut(s) 591, 600
Fnu4HI GCNGC 8 cut(s) 183, 666, 1070, 1201, 1204, 1207, 1512, 1545
FokI GGATG 4 cut(s) 104, 995, 1739, 2033
FriOI GRGCYC 4 cut(s) 121, 681, 1227, 1784
Fsp4HI GCNGC 8 cut(s) 183, 666, 1070, 1201, 1204, 1207, 1512, 1545
FspAI RTGCGCAY 1 cut(s) 1394
FspBI CTAG 5 cut(s) 6, 42, 756, 1044, 1977
FspI TGCGCA 2 cut(s) 1394, 1478
GlaI GCGC 6 cut(s) 186, 188, 582, 760, 1394, 1478
GluI GCNGC 8 cut(s) 183, 666, 1070, 1201, 1204, 1207, 1512, 1545
GsuI CTGGAG 1 cut(s) 2186
HaeII RGCGCY 1 cut(s) 762
HgaI GACGC 1 cut(s) 979
HhaI GCGC 6 cut(s) 187, 189, 583, 761, 1395, 1479
Hin1I GRCGYC 1 cut(s) 1769
Hin1II CATG 9 cut(s) 193, 788, 875, 1021, 1253, 1296, 1540, 1917, 2038
Hin6I GCGC 6 cut(s) 185, 187, 581, 759, 1393, 1477
HinP1I GCGC 6 cut(s) 185, 187, 581, 759, 1393, 1477
HincII GTYRAC 1 cut(s) 278
HindII GTYRAC 1 cut(s) 278
HindIII AAGCTT 1 cut(s) 794
HinfI GANTC 8 cut(s) 52, 197, 238, 1130, 1355, 1452, 1532, 1763
HphI GGTGA 5 cut(s) 314, 400, 1006, 1719, 1877
Hpy166II GTNNAC 8 cut(s) 209, 278, 464, 533, 592, 601, 1014, 1093
Hpy188I TCNGA 9 cut(s) 57, 178, 490, 571, 641, 766, 1153, 1762, 2085
Hpy188III TCNNGA 8 cut(s) 391, 465, 628, 697, 1220, 1250, 1936, 2203
Hpy8I GTNNAC 8 cut(s) 209, 278, 464, 533, 592, 601, 1014, 1093
Hpy99I CGWCG 4 cut(s) 175, 272, 1771, 1774
HpyAV CCTTC 6 cut(s) 284, 491, 512, 958, 1369, 1827
HpyCH4III ACNGT 6 cut(s) 326, 380, 1002, 1097, 1175, 1750
HpyCH4IV ACGT 6 cut(s) 205, 270, 438, 529, 1769, 1902
HpyCH4V TGCA 9 cut(s) 619, 672, 721, 784, 905, 1178, 1200, 1409, 1544
HpyF10VI GCNNNNNNNGC 5 cut(s) 758, 1206, 1357, 1914, 1959
HpyF3I CTNAG 9 cut(s) 50, 177, 422, 487, 714, 763, 805, 1116, 1949
HpySE526I ACGT 6 cut(s) 205, 270, 438, 529, 1769, 1902
Hsp92I GRCGYC 1 cut(s) 1769
Hsp92II CATG 9 cut(s) 193, 788, 875, 1021, 1253, 1296, 1540, 1917, 2038
HspAI GCGC 6 cut(s) 185, 187, 581, 759, 1393, 1477
Kpn2I TCCGGA 1 cut(s) 390
KpnI GGTACC 1 cut(s) 1709
KroI GCCGGC 2 cut(s) 45, 1142
KroNI GCCGGC 2 cut(s) 47, 1144
Kzo9I GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
LguI GCTCTTC 1 cut(s) 1232
LmnI GCTCC 1 cut(s) 676
Lsp1109I GCAGC 7 cut(s) 169, 652, 1056, 1193, 1212, 1498, 1556
LweI GCATC 4 cut(s) 136, 343, 708, 739
MaeI CTAG 5 cut(s) 6, 42, 756, 1044, 1977
MaeII ACGT 6 cut(s) 205, 270, 438, 529, 1769, 1902
MaeIII GTNAC 8 cut(s) 406, 548, 1725, 1744, 1865, 1894, 2088, 2222
MalI GATC 9 cut(s) 10, 17, 169, 321, 342, 638, 850, 935, 2197
MboI GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
MfeI CAATTG 3 cut(s) 974, 1284, 2211
MflI RGATCY 4 cut(s) 15, 848, 933, 2195
MhlI GDGCHC 6 cut(s) 121, 681, 1025, 1227, 1784, 1950
MlsI TGGCCA 1 cut(s) 1662
MluNI TGGCCA 1 cut(s) 1662
MlyI GAGTC 5 cut(s) 61, 1349, 1461, 1526, 1757
MmeI TCCRAC 4 cut(s) 873, 961, 1349, 1578
Mox20I TGGCCA 1 cut(s) 1662
Mph1103I ATGCAT 1 cut(s) 786
MroI TCCGGA 1 cut(s) 390
MroNI GCCGGC 2 cut(s) 45, 1142
MscI TGGCCA 1 cut(s) 1662
MseI TTAA 4 cut(s) 1839, 1989, 2052, 2266
MslI CAYNNNNRTG 2 cut(s) 348, 2033
Msp20I TGGCCA 1 cut(s) 1662
MspA1I CMGCKG 2 cut(s) 587, 1203
MspR9I CCNGG 7 cut(s) 32, 165, 412, 1413, 1414, 1659, 1664
MunI CAATTG 3 cut(s) 974, 1284, 2211
MvaI CCWGG 2 cut(s) 1659, 1664
MvnI CGCG 2 cut(s) 187, 1360
MwoI GCNNNNNNNGC 5 cut(s) 758, 1206, 1357, 1914, 1959
NaeI GCCGGC 2 cut(s) 47, 1144
NciI CCSGG 5 cut(s) 32, 165, 412, 1413, 1414
NcoI CCATGG 1 cut(s) 1536
NdeI CATATG 1 cut(s) 1967
NdeII GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
NgoMIV GCCGGC 2 cut(s) 45, 1142
NheI GCTAGC 1 cut(s) 1043
NlaIII CATG 9 cut(s) 193, 788, 875, 1021, 1253, 1296, 1540, 1917, 2038
NlaIV GGNNCC 4 cut(s) 790, 850, 1610, 1707
NmeAIII GCCGAG 1 cut(s) 1898
NmuCI GTSAC 6 cut(s) 406, 1725, 1744, 1865, 2088, 2222
NsbI TGCGCA 2 cut(s) 1394, 1478
NsiI ATGCAT 1 cut(s) 786
NspI RCATGY 2 cut(s) 875, 2038
NspV TTCGAA 2 cut(s) 1103, 2042
PagI TCATGA 1 cut(s) 1249
PauI GCGCGC 1 cut(s) 185
PciI ACATGT 1 cut(s) 2034
PciSI GCTCTTC 1 cut(s) 1232
PcsI WCGNNNNNNNCGW 1 cut(s) 1766
PdiI GCCGGC 2 cut(s) 47, 1144
PfeI GAWTC 3 cut(s) 197, 238, 1130
PflFI GACNNNGTC 1 cut(s) 250
PflMI CCANNNNNTGG 3 cut(s) 137, 1065, 1669
PfoI TCCNGGA 1 cut(s) 163
PinAI ACCGGT 3 cut(s) 621, 1708, 1722
PkrI GCNGC 8 cut(s) 184, 667, 1071, 1202, 1205, 1208, 1513, 1546
PleI GAGTC 5 cut(s) 60, 1349, 1460, 1526, 1757
PpsI GAGTC 5 cut(s) 60, 1349, 1460, 1526, 1757
Ppu21I YACGTR 1 cut(s) 439
PscI ACATGT 1 cut(s) 2034
PshAI GACNNNNGTC 1 cut(s) 273
PshBI ATTAAT 1 cut(s) 1839
Psp124BI GAGCTC 2 cut(s) 681, 1227
Psp6I CCWGG 2 cut(s) 1657, 1662
PspEI GGTNACC 1 cut(s) 1725
PspGI CCWGG 2 cut(s) 1657, 1662
PspN4I GGNNCC 4 cut(s) 790, 850, 1610, 1707
PspPI GGNCC 8 cut(s) 209, 232, 689, 789, 920, 1550, 1720, 1921
PstNI CAGNNNCTG 2 cut(s) 923, 1206
PsuI RGATCY 4 cut(s) 15, 848, 933, 2195
PsyI GACNNNGTC 1 cut(s) 250
PteI GCGCGC 1 cut(s) 185
RsaI GTAC 4 cut(s) 959, 1280, 1707, 2217
RsaNI GTAC 4 cut(s) 958, 1279, 1706, 2216
RseI CAYNNNNRTG 2 cut(s) 348, 2033
SacI GAGCTC 2 cut(s) 681, 1227
SapI GCTCTTC 1 cut(s) 1232
SaqAI TTAA 4 cut(s) 1839, 1989, 2052, 2266
SatI GCNGC 8 cut(s) 183, 666, 1070, 1201, 1204, 1207, 1512, 1545
Sau3AI GATC 9 cut(s) 8, 15, 167, 319, 340, 636, 848, 933, 2195
Sau96I GGNCC 8 cut(s) 209, 232, 689, 789, 920, 1550, 1720, 1921
SchI GAGTC 5 cut(s) 61, 1349, 1461, 1526, 1757
ScrFI CCNGG 7 cut(s) 32, 165, 412, 1413, 1414, 1659, 1664
SduI GDGCHC 6 cut(s) 121, 681, 1025, 1227, 1784, 1950
SfaNI GCATC 4 cut(s) 136, 343, 708, 739
SfuI TTCGAA 2 cut(s) 1103, 2042
SinI GGWCC 4 cut(s) 209, 789, 1550, 1720
SmaI CCCGGG 1 cut(s) 1414
SmiMI CAYNNNNRTG 2 cut(s) 348, 2033
SmlI CTYRAG 1 cut(s) 1220
SmoI CTYRAG 1 cut(s) 1220
SsiI CCGC 7 cut(s) 19, 507, 587, 846, 1041, 1203, 1360
SspI AATATT 1 cut(s) 1843
SspMI CTAG 5 cut(s) 6, 42, 756, 1044, 1977
SstI GAGCTC 2 cut(s) 681, 1227
StyD4I CCNGG 7 cut(s) 30, 163, 410, 1411, 1412, 1657, 1662
StyI CCWWGG 2 cut(s) 945, 1536
TaaI ACNGT 6 cut(s) 326, 380, 1002, 1097, 1175, 1750
TaiI ACGT 6 cut(s) 208, 273, 441, 532, 1772, 1905
TaqII GACCGA 2 cut(s) 1235, 1445
TatI WGTACW 1 cut(s) 2215
TauI GCSGC 1 cut(s) 1206
TfiI GAWTC 3 cut(s) 197, 238, 1130
Tru1I TTAA 4 cut(s) 1839, 1989, 2052, 2266
Tru9I TTAA 4 cut(s) 1839, 1989, 2052, 2266
TscAI CASTG 2 cut(s) 228, 907
TseFI GTSAC 6 cut(s) 406, 1725, 1744, 1865, 2088, 2222
TseI GCWGC 7 cut(s) 182, 665, 1069, 1200, 1206, 1511, 1544
Tsp45I GTSAC 6 cut(s) 406, 1725, 1744, 1865, 2088, 2222
TspDTI ATGAA 3 cut(s) 206, 330, 666
TspGWI ACGGA 4 cut(s) 104, 902, 1412, 1884
TspMI CCCGGG 1 cut(s) 1412
TspRI CASTG 2 cut(s) 228, 907
Tth111I GACNNNGTC 1 cut(s) 250
Van91I CCANNNNNTGG 3 cut(s) 137, 1065, 1669
VpaK11BI GGWCC 4 cut(s) 209, 789, 1550, 1720
VspI ATTAAT 1 cut(s) 1839
XapI RAATTY 3 cut(s) 989, 1154, 1193
XceI RCATGY 2 cut(s) 875, 2038
XcmI CCANNNNNNNNNTGG 1 cut(s) 1290
XmaI CCCGGG 1 cut(s) 1412
XmiI GTMKAC 2 cut(s) 591, 600
XspI CTAG 5 cut(s) 6, 42, 756, 1044, 1977
ZraI GACGTC 1 cut(s) 1770
Zsp2I ATGCAT 1 cut(s) 786
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.