Rmu_sc0005399.1_g000012

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005399.1
OG0000269
Physical Location & Seq
Reverse (-)
60970 .. 64645
3676 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005399.1_g000012.1.cds

Sequence Viewer

Length: 1788 bp
atgcgagctggaggccggtgggctggaggcagcgactgcagggtggggcagcgagctgattggctaacaacgatctgggatcgatgcgggattgaagtgatgcagccgggtctgggatctgcagcacggcgcggggctgctgtccggagggaggatctggcagccggcggggaggcgtgcacggggctgaacgggcttggctgcaggtgggtaggcttctgtgtgagtgctgagaggctctgtgtgagctctgtgcaagccgagcaggtggggaagggagggccgagtctgctggagagggaaccgagtttttttcggataaccaatatcgtggatgtcacagtttcagacctcactgacatcatgggaggggaggagtgggcgcctcgactgtcgagcccactcactcctttcatcgtcttctccgtcaagaggctctcacaactcgatcgtcctccatctctggtttctctctccctttctccaaatctgaaatccctccacatcctcttcctaaaccctaaatcagaaatccctcttctctggttcctctcactattagaaatccctcttctctggttcctctcactctcttcccccatctccgaaatccctcaaatccctaaccgtcattcttatctcgttcctcgctctctttctccatctccgaaatcactcggaccaaacatgccgccgaaggtctacacaaagaacgcacccaaaagggagaaaccgagcagctccagtaactctgatggaggtgcccgaaagagttctcgaatggcggcccctaaaccgagcagctccacaacgatctccgatggaggcccccgaaagagtactcgaattgccgcctctaaagcatcggcttcggcgacggtacctaaactgaaacctacttccaatgaagcggtaattgaggcaccgaaatctactttcgatgaaccggtggttgaggcggagaaacctccttccaatgatacgtggtcgcgaaaagagaaggcaccagaggatttagagttttctgcctcacctgccgaagtcaaagaggtgaaggatcgaaagaagctcatcatgaagaagaaagcctccggtcgttccatgagctttttgaactacctgaacattcaacacaaacaaatcaatcccccaaaactaaaccatgattttcgagttgagatatctcaaaaatggaaagagcttccagctaaagagaaggaacagtatgtagtgactgatcgatgtggtcagtcatcagtttctgaggaagagttgcttgagttggttcggattgatacccgttgctctccagaccacttcaggtctttggttgcagactttagcgatgagaaaaaggcagtctgttcagcaattggatttgatgtgttgttgaagatgtcaggaaggaaaattcaccactctatgttgcgtgtccttgtggactccgtagaccccaatgcatgtactataactatgcatggaaagaagattgaaatggatgcaagtgactttgaaaatgtgacggggttgaagaatgctgggtccgaggtcgactttaaaggttccactaatgatcaccctgagttgatggcgataataaactccttgtgtgggaaggataagaagatcagtttaagggacgtgcagaactacctgaaggatacagaagaagttgacaacaagttcaagcgtctgtttgtgttgttcacaatgagcaccatccttagcccatctgcctcactgacaataccaaagaagtggctgctggacctgaagacactcgcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

595

Amino Acids

65.51

Weight (kDa)

9.14

Isoelectric Point (pI)

50.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 3 cut(s) 195, 256, 1042
Acc36I ACCTGC 3 cut(s) 195, 256, 1042
Acc65I GGTACC 1 cut(s) 880
AccB1I GGYRCC 5 cut(s) 382, 761, 880, 922, 1003
AccI GTMKAC 3 cut(s) 702, 1449, 1551
AccII CGCG 2 cut(s) 132, 991
AccIII TCCGGA 1 cut(s) 144
AciI CCGC 8 cut(s) 87, 132, 168, 692, 785, 852, 911, 959
AclWI GGATC 4 cut(s) 87, 124, 162, 1065
AcsI RAATTY 1 cut(s) 1410
AcuI CTGAAG 2 cut(s) 1303, 1676
AcyI GRCGYC 1 cut(s) 383
AfaI GTAC 3 cut(s) 841, 882, 1465
AfiI CCNNNNNNNGG 4 cut(s) 113, 151, 432, 1611
AgeI ACCGGT 1 cut(s) 946
AgsI TTSAA 8 cut(s) 95, 1114, 1130, 1393, 1493, 1514, 1531, 1687
AjiI CACGTC 1 cut(s) 1642
AluBI AGCT 9 cut(s) 8, 56, 249, 741, 804, 1069, 1107, 1201, 1208
AluI AGCT 9 cut(s) 8, 56, 249, 741, 804, 1069, 1107, 1201, 1208
Alw21I GWGCWC 3 cut(s) 182, 251, 1718
Alw44I GTGCAC 1 cut(s) 178
AlwI GGATC 4 cut(s) 87, 124, 162, 1065
AlwNI CAGNNNCTG 2 cut(s) 36, 1262
Aor13HI TCCGGA 1 cut(s) 144
AoxI GGCC 4 cut(s) 13, 281, 786, 826
ApaLI GTGCAC 1 cut(s) 178
ApoI RAATTY 1 cut(s) 1410
AsiGI ACCGGT 1 cut(s) 946
Asp700I GAANNNNTTC 1 cut(s) 772
Asp718I GGTACC 1 cut(s) 880
AspLEI GCGC 2 cut(s) 132, 385
AspS9I GGNCC 6 cut(s) 281, 680, 787, 827, 1542, 1768
AsuC2I CCSGG 1 cut(s) 108
AsuHPI GGTGA 4 cut(s) 1023, 1063, 1406, 1568
AvaII GGWCC 3 cut(s) 680, 1542, 1768
BaeGI GKGCMC 2 cut(s) 182, 766
BanI GGYRCC 5 cut(s) 382, 761, 880, 922, 1003
BanII GRGCYC 2 cut(s) 251, 401
BbsI GAAGAC 2 cut(s) 412, 1781
Bbv12I GWGCWC 3 cut(s) 182, 251, 1718
BccI CCATC 8 cut(s) 466, 608, 670, 749, 815, 1582, 1727, 1738
BceAI ACGGC 1 cut(s) 143
BcgI CGANNNNNNTGC 2 cut(s) 852, 886
BciVI GTATCC 1 cut(s) 1654
BclI TGATCA 1 cut(s) 1573
BcnI CCSGG 1 cut(s) 108
BfmI CTRYAG 3 cut(s) 37, 120, 202
BfoI RGCGCY 1 cut(s) 386
BfuAI ACCTGC 3 cut(s) 195, 256, 1042
BfuI GTATCC 1 cut(s) 1654
BmcAI AGTACT 1 cut(s) 841
Bme1390I CCNGG 1 cut(s) 108
Bme18I GGWCC 3 cut(s) 680, 1542, 1768
BmgBI CACGTC 1 cut(s) 1642
BmgT120I GGNCC 6 cut(s) 281, 680, 787, 827, 1542, 1768
BmrFI CCNGG 1 cut(s) 108
BmsI GCATC 4 cut(s) 74, 90, 872, 1489
BpiI GAAGAC 2 cut(s) 412, 1781
BpmI CTGGAG 5 cut(s) 30, 45, 314, 727, 1293
Bpu10I CCTNAGC 1 cut(s) 1724
BpuEI CTTGAG 1 cut(s) 1298
BpuMI CCSGG 1 cut(s) 108
Bsa29I ATCGAT 2 cut(s) 82, 1240
BsaAI YACGTR 1 cut(s) 984
BsaHI GRCGYC 1 cut(s) 383
BsaJI CCNNGG 1 cut(s) 1545
BsaWI WCCGGW 3 cut(s) 144, 946, 1091
Bsc4I CCNNNNNNNGG 4 cut(s) 113, 151, 432, 1611
Bse118I RCCGGY 3 cut(s) 15, 164, 946
Bse1I ACTGG 1 cut(s) 744
BseAI TCCGGA 1 cut(s) 144
BseCI ATCGAT 2 cut(s) 82, 1240
BseDI CCNNGG 1 cut(s) 1545
BseGI GGATG 4 cut(s) 340, 504, 1504, 1719
BseLI CCNNNNNNNGG 4 cut(s) 113, 151, 432, 1611
BseMII CTCAG 3 cut(s) 222, 1254, 1572
BseNI ACTGG 1 cut(s) 744
BseRI GAGGAG 1 cut(s) 389
BseSI GKGCMC 2 cut(s) 182, 766
BseYI CCCAGC 1 cut(s) 1538
BsgI GTGCAG 1 cut(s) 1664
Bsh1236I CGCG 2 cut(s) 132, 991
Bsh1285I CGRYCG 2 cut(s) 451, 1096
BshFI GGCC 4 cut(s) 15, 283, 788, 828
BshNI GGYRCC 5 cut(s) 382, 761, 880, 922, 1003
BshTI ACCGGT 1 cut(s) 946
BshVI ATCGAT 2 cut(s) 82, 1240
BsiEI CGRYCG 2 cut(s) 451, 1096
BsiHKAI GWGCWC 3 cut(s) 182, 251, 1718
BsiSI CCGG 6 cut(s) 16, 107, 145, 165, 947, 1092
BslFI GGGAC 1 cut(s) 1652
BslI CCNNNNNNNGG 4 cut(s) 113, 151, 432, 1611
BsmFI GGGAC 1 cut(s) 1652
BsmI GAATGC 1 cut(s) 1540
BsnI GGCC 4 cut(s) 15, 283, 788, 828
Bsp1286I GDGCHC 5 cut(s) 182, 251, 401, 766, 1718
Bsp13I TCCGGA 1 cut(s) 144
Bsp68I TCGCGA 1 cut(s) 991
BspACI CCGC 8 cut(s) 87, 132, 168, 692, 785, 852, 911, 959
BspANI GGCC 4 cut(s) 15, 283, 788, 828
BspCNI CTCAG 3 cut(s) 223, 1255, 1573
BspDI ATCGAT 2 cut(s) 82, 1240
BspEI TCCGGA 1 cut(s) 144
BspFNI CGCG 2 cut(s) 132, 991
BspHI TCATGA 1 cut(s) 1074
BspMAI CTGCAG 3 cut(s) 41, 124, 206
BspMI ACCTGC 3 cut(s) 195, 256, 1042
BspPI GGATC 4 cut(s) 87, 124, 162, 1065
BspT107I GGYRCC 5 cut(s) 382, 761, 880, 922, 1003
BsrFI RCCGGY 3 cut(s) 15, 164, 946
BsrI ACTGG 1 cut(s) 744
BssAI RCCGGY 3 cut(s) 15, 164, 946
BssECI CCNNGG 1 cut(s) 1545
BssNI GRCGYC 1 cut(s) 383
Bst4CI ACNGT 5 cut(s) 343, 393, 629, 880, 1224
Bst6I CTCTTC 5 cut(s) 515, 543, 576, 598, 1263
BstACI GRCGYC 1 cut(s) 383
BstAPI GCANNNNNTGC 1 cut(s) 36
BstBAI YACGTR 1 cut(s) 984
BstC8I GCNNGC 5 cut(s) 6, 54, 166, 178, 258
BstDEI CTNAG 4 cut(s) 231, 1263, 1581, 1724
BstF5I GGATG 4 cut(s) 340, 504, 1504, 1719
BstFNI CGCG 2 cut(s) 132, 991
BstH2I RGCGCY 1 cut(s) 386
BstHHI GCGC 2 cut(s) 132, 385
BstMCI CGRYCG 2 cut(s) 451, 1096
BstMWI GCNNNNNNNGC 6 cut(s) 36, 193, 262, 289, 860, 1034
BstNSI RCATGY 2 cut(s) 691, 1464
BstSCI CCNGG 1 cut(s) 106
BstSFI CTRYAG 3 cut(s) 37, 120, 202
BstSLI GKGCMC 2 cut(s) 182, 766
BstUI CGCG 2 cut(s) 132, 991
BstV2I GAAGAC 2 cut(s) 412, 1781
BstX2I RGATCY 2 cut(s) 116, 154
BstXI CCANNNNNNTGG 2 cut(s) 331, 1758
BstYI RGATCY 2 cut(s) 116, 154
Bsu15I ATCGAT 2 cut(s) 82, 1240
BsuI GTATCC 1 cut(s) 1654
BsuRI GGCC 4 cut(s) 15, 283, 788, 828
BsuTUI ATCGAT 2 cut(s) 82, 1240
BtgZI GCGATG 1 cut(s) 1359
BtrI CACGTC 1 cut(s) 1642
BtsCI GGATG 4 cut(s) 340, 504, 1504, 1719
BtsIMutI CAGTG 2 cut(s) 354, 1739
BtuMI TCGCGA 1 cut(s) 991
BveI ACCTGC 3 cut(s) 195, 256, 1042
Cac8I GCNNGC 5 cut(s) 6, 54, 166, 178, 258
CaiI CAGNNNCTG 2 cut(s) 36, 1262
CciI TCATGA 1 cut(s) 1074
CfoI GCGC 2 cut(s) 132, 385
Cfr10I RCCGGY 3 cut(s) 15, 164, 946
Cfr13I GGNCC 6 cut(s) 281, 680, 787, 827, 1542, 1768
ClaI ATCGAT 2 cut(s) 82, 1240
CseI GACGC 1 cut(s) 1679
Csp6I GTAC 3 cut(s) 840, 881, 1464
CspAI ACCGGT 1 cut(s) 946
CviAII CATG 7 cut(s) 364, 688, 1075, 1102, 1163, 1461, 1478
CviQI GTAC 3 cut(s) 840, 881, 1464
DdeI CTNAG 4 cut(s) 231, 1263, 1581, 1724
DinI GGCGCC 1 cut(s) 384
DraI TTTAAA 1 cut(s) 1558
Eam1104I CTCTTC 5 cut(s) 515, 543, 576, 598, 1263
EarI CTCTTC 5 cut(s) 515, 543, 576, 598, 1263
EciI GGCGGA 1 cut(s) 974
Ecl136II GAGCTC 1 cut(s) 249
Eco24I GRGCYC 2 cut(s) 251, 401
Eco32I GATATC 1 cut(s) 1182
Eco47I GGWCC 3 cut(s) 680, 1542, 1768
Eco53kI GAGCTC 1 cut(s) 249
Eco57I CTGAAG 2 cut(s) 1303, 1676
EcoICRI GAGCTC 1 cut(s) 249
EcoO109I RGGNCCY 1 cut(s) 827
EcoRV GATATC 1 cut(s) 1182
EcoT22I ATGCAT 2 cut(s) 1462, 1479
EcoT38I GRGCYC 2 cut(s) 251, 401
EgeI GGCGCC 1 cut(s) 384
EheI GGCGCC 1 cut(s) 384
FaeI CATG 7 cut(s) 367, 691, 1078, 1105, 1166, 1464, 1481
FalI AAGNNNNNCTT 2 cut(s) 1260, 1292
FaqI GGGAC 1 cut(s) 1652
FatI CATG 7 cut(s) 363, 687, 1074, 1101, 1162, 1460, 1477
FauI CCCGC 3 cut(s) 80, 125, 161
FbaI TGATCA 1 cut(s) 1573
FblI GTMKAC 3 cut(s) 702, 1449, 1551
FokI GGATG 4 cut(s) 347, 491, 1511, 1706
FriOI GRGCYC 2 cut(s) 251, 401
GlaI GCGC 2 cut(s) 131, 384
GsaI CCCAGC 1 cut(s) 1542
GsuI CTGGAG 5 cut(s) 30, 45, 314, 727, 1293
HaeII RGCGCY 1 cut(s) 386
HaeIII GGCC 4 cut(s) 15, 283, 788, 828
HapII CCGG 6 cut(s) 16, 107, 145, 165, 947, 1092
HgaI GACGC 1 cut(s) 1679
HhaI GCGC 2 cut(s) 132, 385
Hin1I GRCGYC 1 cut(s) 383
Hin1II CATG 7 cut(s) 367, 691, 1078, 1105, 1166, 1464, 1481
Hin6I GCGC 2 cut(s) 130, 383
HinP1I GCGC 2 cut(s) 130, 383
HincII GTYRAC 2 cut(s) 1552, 1675
HindII GTYRAC 2 cut(s) 1552, 1675
HinfI GANTC 2 cut(s) 286, 1442
HpaII CCGG 6 cut(s) 16, 107, 145, 165, 947, 1092
HphI GGTGA 4 cut(s) 1023, 1063, 1406, 1568
Hpy166II GTNNAC 7 cut(s) 180, 703, 1441, 1450, 1552, 1675, 1707
Hpy188III TCNNGA 7 cut(s) 145, 430, 777, 990, 1075, 1310, 1401
Hpy8I GTNNAC 7 cut(s) 180, 703, 1441, 1450, 1552, 1675, 1707
Hpy99I CGWCG 1 cut(s) 880
HpyAV CCTTC 9 cut(s) 268, 691, 981, 994, 1048, 1210, 1398, 1609, 1651
HpyCH4III ACNGT 5 cut(s) 343, 393, 629, 880, 1224
HpyCH4IV ACGT 2 cut(s) 983, 1641
HpyF10VI GCNNNNNNNGC 6 cut(s) 36, 193, 262, 289, 860, 1034
HpyF3I CTNAG 4 cut(s) 231, 1263, 1581, 1724
HpySE526I ACGT 2 cut(s) 983, 1641
Hsp92I GRCGYC 1 cut(s) 383
Hsp92II CATG 7 cut(s) 367, 691, 1078, 1105, 1166, 1464, 1481
HspAI GCGC 2 cut(s) 130, 383
KasI GGCGCC 1 cut(s) 382
Kpn2I TCCGGA 1 cut(s) 144
KpnI GGTACC 1 cut(s) 884
KroI GCCGGC 1 cut(s) 164
KroNI GCCGGC 1 cut(s) 166
Ksp22I TGATCA 1 cut(s) 1573
LmnI GCTCC 2 cut(s) 746, 809
LweI GCATC 4 cut(s) 74, 90, 872, 1489
MaeII ACGT 2 cut(s) 983, 1641
MaeIII GTNAC 5 cut(s) 337, 746, 1231, 1505, 1519
MfeI CAATTG 1 cut(s) 1371
MflI RGATCY 2 cut(s) 116, 154
MhlI GDGCHC 5 cut(s) 182, 251, 401, 766, 1718
MluCI AATT 4 cut(s) 846, 915, 1371, 1410
Mly113I GGCGCC 1 cut(s) 383
MlyI GAGTC 2 cut(s) 295, 1436
Mph1103I ATGCAT 2 cut(s) 1462, 1479
MroI TCCGGA 1 cut(s) 144
MroNI GCCGGC 1 cut(s) 164
MroXI GAANNNNTTC 1 cut(s) 772
MseI TTAA 2 cut(s) 1557, 1634
MspI CCGG 6 cut(s) 16, 107, 145, 165, 947, 1092
MspR9I CCNGG 1 cut(s) 108
MunI CAATTG 1 cut(s) 1371
Mva1269I GAATGC 1 cut(s) 1540
MvnI CGCG 2 cut(s) 132, 991
MwoI GCNNNNNNNGC 6 cut(s) 36, 193, 262, 289, 860, 1034
NaeI GCCGGC 1 cut(s) 166
NarI GGCGCC 1 cut(s) 383
NciI CCSGG 1 cut(s) 108
NgoMIV GCCGGC 1 cut(s) 164
NlaIII CATG 7 cut(s) 367, 691, 1078, 1105, 1166, 1464, 1481
NmeAIII GCCGAG 2 cut(s) 286, 309
NmuCI GTSAC 4 cut(s) 337, 1231, 1505, 1519
NruI TCGCGA 1 cut(s) 991
NsiI ATGCAT 2 cut(s) 1462, 1479
NspI RCATGY 2 cut(s) 691, 1464
PagI TCATGA 1 cut(s) 1074
PaqCI CACCTGC 3 cut(s) 195, 256, 1042
PcsI WCGNNNNNNNCGW 2 cut(s) 423, 872
PctI GAATGC 1 cut(s) 1540
PdiI GCCGGC 1 cut(s) 166
PdmI GAANNNNTTC 1 cut(s) 772
PinAI ACCGGT 1 cut(s) 946
Ple19I CGATCG 1 cut(s) 451
PleI GAGTC 2 cut(s) 294, 1436
PluTI GGCGCC 1 cut(s) 386
PpsI GAGTC 2 cut(s) 294, 1436
Ppu21I YACGTR 1 cut(s) 984
Psp124BI GAGCTC 1 cut(s) 251
PspFI CCCAGC 1 cut(s) 1538
PspPI GGNCC 6 cut(s) 281, 680, 787, 827, 1542, 1768
PstI CTGCAG 3 cut(s) 41, 124, 206
PstNI CAGNNNCTG 2 cut(s) 36, 1262
PsuI RGATCY 2 cut(s) 116, 154
PvuI CGATCG 1 cut(s) 451
RruI TCGCGA 1 cut(s) 991
RsaI GTAC 3 cut(s) 841, 882, 1465
RsaNI GTAC 3 cut(s) 840, 881, 1464
SacI GAGCTC 1 cut(s) 251
SalI GTCGAC 1 cut(s) 1550
SaqAI TTAA 2 cut(s) 1557, 1634
Sau96I GGNCC 6 cut(s) 281, 680, 787, 827, 1542, 1768
ScaI AGTACT 1 cut(s) 841
SchI GAGTC 2 cut(s) 295, 1436
ScrFI CCNGG 1 cut(s) 108
SduI GDGCHC 5 cut(s) 182, 251, 401, 766, 1718
SfaNI GCATC 4 cut(s) 74, 90, 872, 1489
SfcI CTRYAG 3 cut(s) 37, 120, 202
SfoI GGCGCC 1 cut(s) 384
SinI GGWCC 3 cut(s) 680, 1542, 1768
SmlI CTYRAG 1 cut(s) 1277
SmoI CTYRAG 1 cut(s) 1277
Sse9I AATT 4 cut(s) 846, 915, 1371, 1410
SsiI CCGC 8 cut(s) 87, 132, 168, 692, 785, 852, 911, 959
SspDI GGCGCC 1 cut(s) 382
SstI GAGCTC 1 cut(s) 251
StyD4I CCNGG 1 cut(s) 106
TaaI ACNGT 5 cut(s) 343, 393, 629, 880, 1224
TaiI ACGT 2 cut(s) 986, 1644
TasI AATT 4 cut(s) 846, 915, 1371, 1410
TatI WGTACW 2 cut(s) 839, 1463
TauI GCSGC 3 cut(s) 694, 788, 854
Tru1I TTAA 2 cut(s) 1557, 1634
Tru9I TTAA 2 cut(s) 1557, 1634
TscAI CASTG 2 cut(s) 361, 1746
TseFI GTSAC 4 cut(s) 337, 1231, 1505, 1519
Tsp45I GTSAC 4 cut(s) 337, 1231, 1505, 1519
TspDTI ATGAA 4 cut(s) 403, 921, 957, 1091
TspGWI ACGGA 2 cut(s) 415, 1435
TspRI CASTG 2 cut(s) 361, 1746
VneI GTGCAC 1 cut(s) 178
VpaK11BI GGWCC 3 cut(s) 680, 1542, 1768
XapI RAATTY 1 cut(s) 1410
XceI RCATGY 2 cut(s) 691, 1464
XmiI GTMKAC 3 cut(s) 702, 1449, 1551
XmnI GAANNNNTTC 1 cut(s) 772
ZrmI AGTACT 1 cut(s) 841
Zsp2I ATGCAT 2 cut(s) 1462, 1479
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.