Rroxscaffold_5G00346620

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000269
Physical Location & Seq
Forward (+)
17548069 .. 17552421
4353 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00346620.1

Sequence Viewer

Length: 1998 bp
ATGTCCATAGCACCCAAACGGAAAAAAGAAAGCACTGCCCAATCCGTAAAATCCACTATTTCACTCATGCACCCAAATGTTTTCTCGAAAAGTGAAAGCTTCACACATTTAAAAGGGCAAGCGATGGCAACAGAAGAGGAGCTTGTTCATTCGAAAAAGATGAAGAAAAAGAAACCCAAACCTGCTGCTCCCCAAACATGCTGTGCACCTGAACATTTCAAAGATGTGGTTGCTACATTTTCAAAGGACAGAGAAGCTGCGGTAGAAGAAATGGGATTTGGTATTTTGTTGAAGCTTTCAGCCAAGACTTTGCATCGGCAACTCTGTGGGATGCTTCTAGATAACCTAGACCCCTACAAACGTCAAATCAAAGTACATGGAAACACTTTGGCTATCACGGCAAAAGATTTCGAAAGGGTGATGGGCGTAGAGGATGCGGGAACACTACTCCAGATAGCGCATGGGGGTCTGATTGTCAACAAGTCACTTTTGCCCATAGTTGCGTGGGGGGACACAGAGGCAAAGAATATGAAGAATTGGGTGAAAAAGTGCGGTGGGTTTTCGAGCAAGACCATTATTTTATCCAAGAAGCATATTGGAAGCACAACTATTGAGCTACCAAATAATGCCCAGGTTGAAGAAGTGCAAGAATCATTGCAGGGCCTAAGGAATGATTTTGACCAATTTCAAGGATCTCTGCAAGGGATTAGGGGTGGCATGGAAGCAATCACCGGAAGGGTTCAACAAATCCAAAGAGACTCAGGGATATCCAACAACGAGTTCAGGGAAACCTTGAATGAACTCCATAGCCATCTCAGAATTGTTCTGACAATTGTAGATCATATGGCAGCAAACCCACAAAACCTGGTGCTCAGTCCTCCCCAGGATCAAATTCCACTGGAAAGACATATCAGTGTTGTTCGGGATATTACAGATACTATCTATGACCCAGAAAACCGCTTCCACCTGTATCAAATTCCAGAGGAAACCACGGTTGTTAGAGATGGAGATGGATTTACTAGGGTTATAGATTTGGAGAAGAATCAACATACAAACAGCAAACAACCATCAGTTGTGACTATTTCTGATGATGTCTCGGTTAGAGATTTGGAGAACAATCAACATACAAACAGCAAACAACCATCAGTTGTGACTATTTCGGATGATGTCTCGGTCAGTGACCAACATCTGGTTACAACTGGAGATTCATTGATGCCTTCGAAGAAATACCGGACAAATCAGATGTTTGGACAGTTCCAAGATCAGTTGAATCGTCAGATTGGGCCGTTTCGGCTTGCAGCAAATTACTTGACGGAAGTGGATCATGACGTGTTATCTTACATCTTTGCTGCTAGTGCACCAATTGATGATCCAAGATATTTATTCCCCTTCACCTTCACGACCACTGTTACCTGCTGGTTATCCACTTACCAAGTTGAATATTGGGATAGCCTAGACGTAACACAAAGTAGGTTGGACCATGGGAAAATGGCTCTGAGAGGTCTGGACTATCTTTTCCCGAGCGAACCTAAGTTTGAGAATTGGAAAATAACGGTACCTCTTGAAGAAGCTAAACAACCACCAGGAAACACGTGGGACTGCGGTGTATCTGTGATCAGAAACATGCAGTCCTATGGAACGCAGTGGTGGAAAACGGGGCCAGAGCGCGATTCAGAAAAGTTGCGCATGGAGCTTGCCCTGTCAATTGTAAAGGACGATATGAATGAGGTTTGGCCCAAAATCCGAAAGGACATTAACGATCTCCAATCAATTGTTCATCACAAGCAAAGCTCGAAAAGGGGCAAAAGTGATGGTACATCTGTCACTTGGAATGCAAACCATAGCGTCTATCAAACTAGTACTAAGAGAAAAAATGACGACGCTTGTGTGACAAGCAGGAAGAAGGAAAATATCAGCATGAGCAAAGATGATTTTGTTTTTGAGACTAGCAAAAACAAAGCAAGTAAGAAGCGTCAAAGCAAGAGGTCAACCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

665

Amino Acids

75.25

Weight (kDa)

8.54

Isoelectric Point (pI)

41.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1685
Acc36I ACCTGC 2 cut(s) 190, 1421
Acc65I GGTACC 1 cut(s) 1555
AccB1I GGYRCC 1 cut(s) 1555
AccB7I CCANNNNNTGG 1 cut(s) 1189
AccII CGCG 1 cut(s) 1668
AciI CCGC 5 cut(s) 260, 437, 552, 958, 1602
AclWI GGATC 4 cut(s) 700, 894, 1329, 1364
AcsI RAATTY 2 cut(s) 891, 975
AcvI CACGTG 1 cut(s) 1593
AfaI GTAC 4 cut(s) 375, 1557, 1816, 1861
AfiI CCNNNNNNNGG 1 cut(s) 1189
AflIII ACRYGT 2 cut(s) 1329, 1590
AhlI ACTAGT 1 cut(s) 1856
AjiI CACGTC 1 cut(s) 1330
AjnI CCWGG 5 cut(s) 630, 864, 882, 1582, 1991
AjuI GAANNNNNNNTTGG 6 cut(s) 261, 293, 764, 796, 1758, 1790
AluBI AGCT 8 cut(s) 99, 142, 257, 295, 616, 1571, 1693, 1791
AluI AGCT 8 cut(s) 99, 142, 257, 295, 616, 1571, 1693, 1791
Alw21I GWGCWC 3 cut(s) 208, 873, 1360
Alw26I GTCTC 4 cut(s) 750, 1099, 1174, 1937
Alw44I GTGCAC 2 cut(s) 204, 1356
AlwI GGATC 4 cut(s) 700, 894, 1329, 1364
Ama87I CYCGRG 1 cut(s) 1519
AoxI GGCC 4 cut(s) 661, 1283, 1658, 1733
ApaLI GTGCAC 2 cut(s) 204, 1356
ApeKI GCWGC 5 cut(s) 185, 257, 848, 1298, 1349
ApoI RAATTY 2 cut(s) 891, 975
Asp718I GGTACC 1 cut(s) 1555
AspLEI GCGC 3 cut(s) 460, 1668, 1686
AspS9I GGNCC 5 cut(s) 661, 1283, 1477, 1658, 1734
AsuHPI GGTGA 4 cut(s) 430, 553, 721, 1384
AsuII TTCGAA 3 cut(s) 152, 411, 1220
AvaI CYCGRG 1 cut(s) 1519
AvaII GGWCC 1 cut(s) 1477
AxyI CCTNAGG 1 cut(s) 665
BaeGI GKGCMC 2 cut(s) 208, 1360
BaeI ACNNNNGTAYC 2 cut(s) 1806, 1839
BanI GGYRCC 1 cut(s) 1555
BbrPI CACGTG 1 cut(s) 1593
Bbv12I GWGCWC 3 cut(s) 208, 873, 1360
BbvI GCAGC 5 cut(s) 172, 244, 860, 1310, 1336
BccI CCATC 8 cut(s) 118, 415, 819, 998, 1004, 1075, 1150, 1805
BceAI ACGGC 2 cut(s) 414, 1270
BciT130I CCWGG 5 cut(s) 632, 866, 884, 1584, 1993
BclI TGATCA 1 cut(s) 1614
BcoDI GTCTC 4 cut(s) 750, 1099, 1174, 1937
BcuI ACTAGT 1 cut(s) 1856
BfaI CTAG 7 cut(s) 338, 347, 1020, 1353, 1454, 1857, 1947
BfuAI ACCTGC 2 cut(s) 190, 1421
BglI GCCNNNNNGGC 1 cut(s) 1291
BisI GCNGC 5 cut(s) 186, 258, 849, 1299, 1350
BlsI GCNGC 5 cut(s) 187, 259, 850, 1300, 1351
BmcAI AGTACT 1 cut(s) 1861
Bme1390I CCNGG 5 cut(s) 632, 866, 884, 1584, 1993
Bme18I GGWCC 1 cut(s) 1477
BmeT110I CYCGRG 1 cut(s) 1519
BmgBI CACGTC 1 cut(s) 1330
BmgT120I GGNCC 5 cut(s) 661, 1283, 1477, 1658, 1734
BmiI GGNNCC 2 cut(s) 1557, 1659
BmrFI CCNGG 5 cut(s) 632, 866, 884, 1584, 1993
BmsI GCATC 4 cut(s) 321, 322, 424, 1203
BpmI CTGGAG 2 cut(s) 434, 1221
Bpu14I TTCGAA 3 cut(s) 152, 411, 1220
BsaAI YACGTR 1 cut(s) 1593
BsaJI CCNNGG 4 cut(s) 630, 882, 990, 1480
BsaWI WCCGGW 2 cut(s) 731, 1230
Bsc4I CCNNNNNNNGG 1 cut(s) 1189
Bse1I ACTGG 2 cut(s) 903, 1204
Bse21I CCTNAGG 1 cut(s) 665
Bse3DI GCAATG 1 cut(s) 653
BseBI CCWGG 5 cut(s) 632, 866, 884, 1584, 1993
BseDI CCNNGG 4 cut(s) 630, 882, 990, 1480
BseGI GGATG 3 cut(s) 336, 439, 1168
BseLI CCNNNNNNNGG 1 cut(s) 1189
BseMI GCAATG 1 cut(s) 653
BseMII CTCAG 4 cut(s) 774, 829, 886, 1487
BseNI ACTGG 2 cut(s) 903, 1204
BseRI GAGGAG 1 cut(s) 152
BseSI GKGCMC 2 cut(s) 208, 1360
BseXI GCAGC 5 cut(s) 172, 244, 860, 1310, 1336
Bsh1236I CGCG 1 cut(s) 1668
BshFI GGCC 4 cut(s) 663, 1285, 1660, 1735
BshNI GGYRCC 1 cut(s) 1555
BsiHKAI GWGCWC 3 cut(s) 208, 873, 1360
BsiHKCI CYCGRG 1 cut(s) 1519
BsiSI CCGG 2 cut(s) 732, 1231
BslFI GGGAC 2 cut(s) 524, 1610
BslI CCNNNNNNNGG 1 cut(s) 1189
BsmAI GTCTC 4 cut(s) 750, 1099, 1174, 1937
BsmFI GGGAC 2 cut(s) 524, 1610
BsmI GAATGC 1 cut(s) 1837
BsnI GGCC 4 cut(s) 663, 1285, 1660, 1735
BsoBI CYCGRG 1 cut(s) 1519
Bsp119I TTCGAA 3 cut(s) 152, 411, 1220
Bsp1286I GDGCHC 3 cut(s) 208, 873, 1360
Bsp143I GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
Bsp19I CCATGG 1 cut(s) 1480
BspACI CCGC 5 cut(s) 260, 437, 552, 958, 1602
BspANI GGCC 4 cut(s) 663, 1285, 1660, 1735
BspCNI CTCAG 4 cut(s) 773, 828, 885, 1488
BspFNI CGCG 1 cut(s) 1668
BspHI TCATGA 1 cut(s) 1324
BspLI GGNNCC 2 cut(s) 1557, 1659
BspMI ACCTGC 2 cut(s) 190, 1421
BspPI GGATC 4 cut(s) 700, 894, 1329, 1364
BspT104I TTCGAA 3 cut(s) 152, 411, 1220
BspT107I GGYRCC 1 cut(s) 1555
BsrDI GCAATG 1 cut(s) 653
BsrI ACTGG 2 cut(s) 903, 1204
BssECI CCNNGG 4 cut(s) 630, 882, 990, 1480
BssMI GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
BssT1I CCWWGG 1 cut(s) 1480
Bst2UI CCWGG 5 cut(s) 632, 866, 884, 1584, 1993
Bst4CI ACNGT 4 cut(s) 994, 1254, 1408, 1555
Bst6I CTCTTC 1 cut(s) 129
BstBAI YACGTR 1 cut(s) 1593
BstBI TTCGAA 3 cut(s) 152, 411, 1220
BstC8I GCNNGC 3 cut(s) 120, 1296, 1695
BstDEI CTNAG 7 cut(s) 665, 760, 815, 872, 1496, 1530, 1863
BstDSI CCRYGG 2 cut(s) 990, 1480
BstF5I GGATG 3 cut(s) 336, 439, 1168
BstFNI CGCG 1 cut(s) 1668
BstHHI GCGC 3 cut(s) 460, 1668, 1686
BstKTI GATC 8 cut(s) 695, 841, 889, 1264, 1324, 1372, 1617, 1762
BstMAI GTCTC 4 cut(s) 750, 1099, 1174, 1937
BstMBI GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
BstMWI GCNNNNNNNGC 4 cut(s) 398, 1291, 1355, 1690
BstNI CCWGG 5 cut(s) 632, 866, 884, 1584, 1993
BstNSI RCATGY 2 cut(s) 201, 1627
BstSCI CCNGG 5 cut(s) 630, 864, 882, 1582, 1991
BstSLI GKGCMC 2 cut(s) 208, 1360
BstUI CGCG 1 cut(s) 1668
BstV1I GCAGC 5 cut(s) 172, 244, 860, 1310, 1336
BstX2I RGATCY 1 cut(s) 692
BstYI RGATCY 1 cut(s) 692
Bsu36I CCTNAGG 1 cut(s) 665
BsuRI GGCC 4 cut(s) 663, 1285, 1660, 1735
BtgI CCRYGG 2 cut(s) 990, 1480
BtgZI GCGATG 1 cut(s) 137
BtrI CACGTC 1 cut(s) 1330
BtsCI GGATG 3 cut(s) 336, 439, 1168
BtsI GCAGTG 2 cut(s) 33, 1649
BtsIMutI CAGTG 6 cut(s) 33, 896, 919, 1183, 1404, 1649
BveI ACCTGC 2 cut(s) 190, 1421
Cac8I GCNNGC 3 cut(s) 120, 1296, 1695
CciI TCATGA 1 cut(s) 1324
CfoI GCGC 3 cut(s) 460, 1668, 1686
Cfr13I GGNCC 5 cut(s) 661, 1283, 1477, 1658, 1734
CseI GACGC 3 cut(s) 1834, 1889, 1961
CsiI ACCWGGT 2 cut(s) 864, 1991
Csp6I GTAC 4 cut(s) 374, 1556, 1815, 1860
CviQI GTAC 4 cut(s) 374, 1556, 1815, 1860
DdeI CTNAG 7 cut(s) 665, 760, 815, 872, 1496, 1530, 1863
DpnI GATC 8 cut(s) 694, 840, 888, 1263, 1323, 1371, 1616, 1761
DpnII GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
DraI TTTAAA 1 cut(s) 111
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
Eco130I CCWWGG 1 cut(s) 1480
Eco32I GATATC 1 cut(s) 768
Eco47I GGWCC 1 cut(s) 1477
Eco72I CACGTG 1 cut(s) 1593
Eco81I CCTNAGG 1 cut(s) 665
Eco88I CYCGRG 1 cut(s) 1519
EcoO109I RGGNCCY 1 cut(s) 661
EcoRII CCWGG 5 cut(s) 630, 864, 882, 1582, 1991
EcoRV GATATC 1 cut(s) 768
EcoT14I CCWWGG 1 cut(s) 1480
ErhI CCWWGG 1 cut(s) 1480
FalI AAGNNNNNCTT 2 cut(s) 126, 158
FaqI GGGAC 2 cut(s) 524, 1610
FauI CCCGC 1 cut(s) 430
FauNDI CATATG 1 cut(s) 843
FbaI TGATCA 1 cut(s) 1614
Fnu4HI GCNGC 5 cut(s) 186, 258, 849, 1299, 1350
FokI GGATG 3 cut(s) 343, 446, 1175
Fsp4HI GCNGC 5 cut(s) 186, 258, 849, 1299, 1350
FspBI CTAG 7 cut(s) 338, 347, 1020, 1353, 1454, 1857, 1947
FspI TGCGCA 1 cut(s) 1685
GlaI GCGC 3 cut(s) 459, 1667, 1685
GluI GCNGC 5 cut(s) 186, 258, 849, 1299, 1350
GsuI CTGGAG 2 cut(s) 434, 1221
HaeIII GGCC 4 cut(s) 663, 1285, 1660, 1735
HapII CCGG 2 cut(s) 732, 1231
HgaI GACGC 3 cut(s) 1834, 1889, 1961
HhaI GCGC 3 cut(s) 460, 1668, 1686
Hin6I GCGC 3 cut(s) 458, 1666, 1684
HinP1I GCGC 3 cut(s) 458, 1666, 1684
HincII GTYRAC 2 cut(s) 478, 1989
HindII GTYRAC 2 cut(s) 478, 1989
HindIII AAGCTT 2 cut(s) 97, 293
HinfI GANTC 6 cut(s) 650, 758, 1042, 1205, 1270, 1670
HpaII CCGG 2 cut(s) 732, 1231
HphI GGTGA 4 cut(s) 430, 553, 721, 1384
Hpy166II GTNNAC 4 cut(s) 206, 478, 1358, 1989
Hpy8I GTNNAC 4 cut(s) 206, 478, 1358, 1989
Hpy99I CGWCG 1 cut(s) 1883
HpyAV CCTTC 5 cut(s) 729, 1227, 1399, 1405, 1897
HpyCH4III ACNGT 4 cut(s) 994, 1254, 1408, 1555
HpyCH4IV ACGT 4 cut(s) 361, 1329, 1458, 1592
HpyF10VI GCNNNNNNNGC 4 cut(s) 398, 1291, 1355, 1690
HpyF3I CTNAG 7 cut(s) 665, 760, 815, 872, 1496, 1530, 1863
HpySE526I ACGT 4 cut(s) 361, 1329, 1458, 1592
HspAI GCGC 3 cut(s) 458, 1666, 1684
KpnI GGTACC 1 cut(s) 1559
Ksp22I TGATCA 1 cut(s) 1614
Kzo9I GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
LmnI GCTCC 3 cut(s) 139, 193, 1690
Lsp1109I GCAGC 5 cut(s) 172, 244, 860, 1310, 1336
LweI GCATC 4 cut(s) 321, 322, 424, 1203
MabI ACCWGGT 2 cut(s) 864, 1991
MaeI CTAG 7 cut(s) 338, 347, 1020, 1353, 1454, 1857, 1947
MaeII ACGT 4 cut(s) 361, 1329, 1458, 1592
MaeIII GTNAC 9 cut(s) 483, 1075, 1150, 1178, 1192, 1408, 1459, 1822, 1888
MalI GATC 8 cut(s) 694, 840, 888, 1263, 1323, 1371, 1616, 1761
MboI GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
MboII GAAGA 9 cut(s) 146, 175, 278, 544, 650, 1051, 1234, 1577, 1912
MfeI CAATTG 4 cut(s) 831, 1362, 1704, 1770
MflI RGATCY 1 cut(s) 692
MhlI GDGCHC 3 cut(s) 208, 873, 1360
MlyI GAGTC 1 cut(s) 752
MmeI TCCRAC 2 cut(s) 795, 1455
MnlI CCTC 9 cut(s) 130, 424, 511, 888, 976, 1493, 1569, 1720, 1977
MseI TTAA 2 cut(s) 110, 1755
MslI CAYNNNNRTG 2 cut(s) 75, 912
MspI CCGG 2 cut(s) 732, 1231
MspR9I CCNGG 5 cut(s) 632, 866, 884, 1584, 1993
MunI CAATTG 4 cut(s) 831, 1362, 1704, 1770
Mva1269I GAATGC 1 cut(s) 1837
MvaI CCWGG 5 cut(s) 632, 866, 884, 1584, 1993
MvnI CGCG 1 cut(s) 1668
MwoI GCNNNNNNNGC 4 cut(s) 398, 1291, 1355, 1690
NcoI CCATGG 1 cut(s) 1480
NdeI CATATG 1 cut(s) 843
NdeII GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
NlaIV GGNNCC 2 cut(s) 1557, 1659
NmuCI GTSAC 6 cut(s) 483, 1075, 1150, 1178, 1822, 1888
NsbI TGCGCA 1 cut(s) 1685
NspI RCATGY 2 cut(s) 201, 1627
NspV TTCGAA 3 cut(s) 152, 411, 1220
PagI TCATGA 1 cut(s) 1324
PctI GAATGC 1 cut(s) 1837
PfeI GAWTC 5 cut(s) 650, 1042, 1205, 1270, 1670
PflMI CCANNNNNTGG 1 cut(s) 1189
PkrI GCNGC 5 cut(s) 187, 259, 850, 1300, 1351
PleI GAGTC 1 cut(s) 752
PmaCI CACGTG 1 cut(s) 1593
PmlI CACGTG 1 cut(s) 1593
PpsI GAGTC 1 cut(s) 752
Ppu21I YACGTR 1 cut(s) 1593
Psp6I CCWGG 5 cut(s) 630, 864, 882, 1582, 1991
PspCI CACGTG 1 cut(s) 1593
PspGI CCWGG 5 cut(s) 630, 864, 882, 1582, 1991
PspN4I GGNNCC 2 cut(s) 1557, 1659
PspPI GGNCC 5 cut(s) 661, 1283, 1477, 1658, 1734
PsuI RGATCY 1 cut(s) 692
RsaI GTAC 4 cut(s) 375, 1557, 1816, 1861
RsaNI GTAC 4 cut(s) 374, 1556, 1815, 1860
RseI CAYNNNNRTG 2 cut(s) 75, 912
SaqAI TTAA 2 cut(s) 110, 1755
SatI GCNGC 5 cut(s) 186, 258, 849, 1299, 1350
Sau3AI GATC 8 cut(s) 692, 838, 886, 1261, 1321, 1369, 1614, 1759
Sau96I GGNCC 5 cut(s) 661, 1283, 1477, 1658, 1734
ScaI AGTACT 1 cut(s) 1861
SchI GAGTC 1 cut(s) 752
ScrFI CCNGG 5 cut(s) 632, 866, 884, 1584, 1993
SduI GDGCHC 3 cut(s) 208, 873, 1360
SexAI ACCWGGT 2 cut(s) 864, 1991
SfaNI GCATC 4 cut(s) 321, 322, 424, 1203
SfuI TTCGAA 3 cut(s) 152, 411, 1220
SinI GGWCC 1 cut(s) 1477
SmiMI CAYNNNNRTG 2 cut(s) 75, 912
SpeI ACTAGT 1 cut(s) 1856
SsiI CCGC 5 cut(s) 260, 437, 552, 958, 1602
SspI AATATT 1 cut(s) 1442
SspMI CTAG 7 cut(s) 338, 347, 1020, 1353, 1454, 1857, 1947
StyD4I CCNGG 5 cut(s) 630, 864, 882, 1582, 1991
StyI CCWWGG 1 cut(s) 1480
TaaI ACNGT 4 cut(s) 994, 1254, 1408, 1555
TaiI ACGT 4 cut(s) 364, 1332, 1461, 1595
TaqI TCGA 6 cut(s) 86, 152, 411, 563, 1220, 1793
TaqII GACCGA 1 cut(s) 1162
TatI WGTACW 2 cut(s) 373, 1859
TfiI GAWTC 5 cut(s) 650, 1042, 1205, 1270, 1670
Tru1I TTAA 2 cut(s) 110, 1755
Tru9I TTAA 2 cut(s) 110, 1755
TscAI CASTG 6 cut(s) 40, 903, 919, 1183, 1411, 1649
TseFI GTSAC 6 cut(s) 483, 1075, 1150, 1178, 1822, 1888
TseI GCWGC 5 cut(s) 185, 257, 848, 1298, 1349
Tsp45I GTSAC 6 cut(s) 483, 1075, 1150, 1178, 1822, 1888
TspDTI ATGAA 7 cut(s) 137, 176, 545, 813, 1197, 1736, 1766
TspGWI ACGGA 3 cut(s) 34, 34, 1328
TspRI CASTG 6 cut(s) 40, 903, 919, 1183, 1411, 1649
Van91I CCANNNNNTGG 1 cut(s) 1189
VneI GTGCAC 2 cut(s) 204, 1356
VpaK11BI GGWCC 1 cut(s) 1477
XapI RAATTY 2 cut(s) 891, 975
XbaI TCTAGA 1 cut(s) 337
XceI RCATGY 2 cut(s) 201, 1627
XcmI CCANNNNNNNNNTGG 2 cut(s) 458, 1590
XspI CTAG 7 cut(s) 338, 347, 1020, 1353, 1454, 1857, 1947
ZrmI AGTACT 1 cut(s) 1861
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.