Rh7DG367700

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000269
Physical Location & Seq
Forward (+)
49744449 .. 49747606
3158 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG367700.1

Sequence Viewer

Length: 2154 bp
ATGGCGGCCCCTAAACCGAGCAGCTCCACAACGATCTCCGATGGAGGCCCCCGAAAGAGTACTCGAATTGCCGCCTCTAAAGCATCGGCTTCGGCGACGGTCTCTGAGGTCTCGAACCAAAATTCTCCAATTTTGGAGACCGCAAAGAAAGCTTCTATTAACGGCACCGAAGCGGTGGTTGAGGTACCTAAACTGAAACCTACTTATGATGAAGCGGTAATTGAGGCACCGAAACCTACTTTCGATGAACCGGTGGTTGAGGCGGAGAAACCTCCTTCCAATGATACGCGGTCGCGAAAAGAGAAGGCACCAGAGGATTTAGAGTTGTCTGCCTCACCTGCCGAAGCCAAAGAGGTGAAGGATCGAAAGAAGCTCATCATGAAGAAGAAAGCCTCCGGTCGTTCCATGAGCTTTTTGAACTACCTGAACATTCAACACAAACAAATGAATCCCCCAAAACTAAACCATGATTTGGTTCGGATTGAAATCCGTTGCTCTCCAGACCGCTTCAGTTCTTTGGTTGCAGACTTTAGCGATGAGAAAAAGGCAGCTTGTTCAGCAATTGGATTTGATGTGTTGTTGAAGATGTCAGGAAGGAAAATTCACCATTCTATGTTGCGTGTCCTTGTGGACTCCGTAGACCCCAATGCATGTACTATAACTATGCACGGAAAGAAGATTGAAATGGATGCAAGTGACTTTGAAAATGTGATGGGGTTGAAGAATGCTGGGTCCGAGGTCGACTTTAAAGGTTCCACTAATGATCACCCTGAGTTGATGGCGATAATAAACTCCTTGTGTGCGAAGGATAAGAAGATCAGTTTAAGGGACGTGCAAAACTACCTGAAGGATACAGAAGAAGTTGACAACAAGTTCAAGCGCCTGTTTGTGTTGTTCACAATGAGCACCATCCTTAGCCCATCTGCCTCACTGACAATACCAAAGAAGTGGCTGCTGGCCCTGAATGACACTCGCCTGATTAGCTCTTTAAACTGGGCTAATTACTCATTCAAATGTTTGATGGAGGCCATCGTCAGTTTCAAAAAAGACTCCCGGTCCTATTGTAGCGATTGTATCCTGTTTCTGCAACTGTTCTATTTTGATTGTGTTTCACATGGGAAGACCATTGTGGACAAGTCCTTGTACCCAGTTGAAGCTTGGGGGGACCATGAAACAGGCAAACTGCTCAAATGGGTGAGCAAGCAAGGTGGTTTGCTGGATGAAAATGTTCTTGTGGCAAAGGTTGGCGATCGTGTTGGTAGTGGAGATCAGACCAAAGCATATGGGGTGATTAAGAAAGAAATGTCTGACTTGGCTGCTAAAGTGAATGGGTTGGAAAATAATATGTGCAATCTGAGAGATGATATGATGGGAAAGATGGACAAAGTCTTGAGTATGCTGAACACTCTGACTGCACAAAATGTGAATGTCAATCAGAACCTTCAAACTGATGGCTTAGCAGAAAAAGTAAGCCCCAAGAAAGTTTCAAAAAGGTATGAAGTTATGAAGTTGTGGGCAGTAGTGAATGGAGAAAGAAACGAAGTACATGGGGAAGACTTGCAACCAAAAAAGAAGACCTCCTTGATTTGCCTATCTGACTCAACATCTGTAGTCAGCCCACTAAAAAGTATGAAGAAAGTTGATGCCAACCCCACCACCAAGAGTAACATAGAGAAGATTGGTAACTTCAAAGTCAATGGACATCGGGAGGAGGCTGACAAAGGAGTGCTCCTGTTTGTTTATGATGTGTCAGCTGAAGAGAAGGAGACCATTGTGGATAGTGAAAATTTCTTCACTAGTCGAAAAGCAGTTTGGTCACTTAAACCTAACGGATGGGTTGAAGATGATATTATCAATTTGTTTAGTGACTATCTATTTCTAGGACGCTTCCCAAGCTATAGATGTTGTTACTTCACAACGTACTTTTGTCAGAAGATGAAAAGTTACAATGATAGAGACATGTGTGGAGATTCAGCAAGGGCAGTTTCGAAGGGTTTGGGTTTGCAAACACTGGACATTATCTACCACCATGTGGAGTTCAAAGTCAAGAATGTTGTGAAGAAGTTTGCTGACTTCCAGTTATTCAAGCCAGCTGAATGCCCTAAACAAGAAGGCTGTTCTGACTGTAGGGTGTATGTGATCAAACACATGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

717

Amino Acids

80.13

Weight (kDa)

8.69

Isoelectric Point (pI)

33.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1985 PF09331 216 - 342 1.4e-06 Domain of unknown function (DUF1985)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 346
Acc36I ACCTGC 1 cut(s) 346
Acc65I GGTACC 1 cut(s) 184
AccB1I GGYRCC 4 cut(s) 164, 184, 226, 307
AccB7I CCANNNNNTGG 2 cut(s) 472, 2032
AccI GTMKAC 2 cut(s) 639, 741
AccII CGCG 2 cut(s) 289, 295
AciI CCGC 8 cut(s) 5, 72, 141, 173, 215, 263, 289, 505
AclWI GGATC 1 cut(s) 369
AcsI RAATTY 3 cut(s) 121, 600, 1786
AcuI CTGAAG 3 cut(s) 493, 866, 1776
AdeI CACNNNGTG 1 cut(s) 2032
AfaI GTAC 6 cut(s) 61, 186, 655, 1145, 1545, 1922
AfiI CCNNNNNNNGG 2 cut(s) 472, 2032
AflIII ACRYGT 2 cut(s) 1959, 2148
AgeI ACCGGT 1 cut(s) 250
AhdI GACNNNNNGTC 1 cut(s) 1054
AhlI ACTAGT 1 cut(s) 1796
AjiI CACGTC 1 cut(s) 832
AjuI GAANNNNNNNTTGG 2 cut(s) 1795, 1827
Alw21I GWGCWC 2 cut(s) 908, 1731
Alw26I GTCTC 5 cut(s) 106, 115, 131, 1760, 1950
AlwI GGATC 1 cut(s) 369
AoxI GGCC 4 cut(s) 6, 46, 957, 1026
ApeKI GCWGC 4 cut(s) 21, 548, 952, 1316
ApoI RAATTY 3 cut(s) 121, 600, 1786
AsiGI ACCGGT 1 cut(s) 250
Asp700I GAANNNNTTC 1 cut(s) 1227
Asp718I GGTACC 1 cut(s) 184
AspLEI GCGC 1 cut(s) 882
AspS9I GGNCC 6 cut(s) 7, 47, 732, 958, 1056, 1165
AsuC2I CCSGG 1 cut(s) 1054
AsuHPI GGTGA 6 cut(s) 327, 367, 596, 758, 1207, 1300
AsuII TTCGAA 1 cut(s) 1988
AvaII GGWCC 3 cut(s) 732, 1056, 1165
BanI GGYRCC 4 cut(s) 164, 184, 226, 307
BbsI GAAGAC 3 cut(s) 1127, 1560, 1580
Bbv12I GWGCWC 2 cut(s) 908, 1731
BbvI GCAGC 4 cut(s) 33, 560, 939, 1303
BceAI ACGGC 1 cut(s) 178
BcgI CGANNNNNNTGC 2 cut(s) 72, 106
BciVI GTATCC 2 cut(s) 844, 1085
BclI TGATCA 2 cut(s) 763, 2139
BcnI CCSGG 1 cut(s) 1054
BcoDI GTCTC 5 cut(s) 106, 115, 131, 1760, 1950
BcuI ACTAGT 1 cut(s) 1796
BfaI CTAG 2 cut(s) 1797, 1880
BfmI CTRYAG 3 cut(s) 1608, 1897, 2125
BfoI RGCGCY 1 cut(s) 883
BfuAI ACCTGC 1 cut(s) 346
BfuI GTATCC 2 cut(s) 844, 1085
BisI GCNGC 6 cut(s) 6, 22, 72, 549, 953, 1317
BlpI GCTNAGC 1 cut(s) 1456
BlsI GCNGC 6 cut(s) 7, 23, 73, 550, 954, 1318
BmcAI AGTACT 1 cut(s) 61
Bme1390I CCNGG 1 cut(s) 1054
Bme18I GGWCC 3 cut(s) 732, 1056, 1165
BmeRI GACNNNNNGTC 1 cut(s) 1054
BmgBI CACGTC 1 cut(s) 832
BmgT120I GGNCC 6 cut(s) 7, 47, 732, 958, 1056, 1165
BmiI GGNNCC 9 cut(s) 9, 49, 166, 186, 228, 309, 733, 754, 1166
BmrFI CCNGG 1 cut(s) 1054
BmrI ACTGGG 2 cut(s) 1003, 1142
BmsI GCATC 3 cut(s) 92, 679, 1633
BmuI ACTGGG 2 cut(s) 1003, 1142
BpiI GAAGAC 3 cut(s) 1127, 1560, 1580
BpmI CTGGAG 1 cut(s) 483
Bpu10I CCTNAGC 1 cut(s) 914
Bpu1102I GCTNAGC 1 cut(s) 1456
Bpu14I TTCGAA 1 cut(s) 1988
BpuEI CTTGAG 1 cut(s) 1411
BpuMI CCSGG 1 cut(s) 1054
BsaBI GATNNNNATC 1 cut(s) 485
BsaI GGTCTC 4 cut(s) 106, 115, 131, 1760
BsaJI CCNNGG 1 cut(s) 735
BsaWI WCCGGW 2 cut(s) 250, 395
Bsc4I CCNNNNNNNGG 2 cut(s) 472, 2032
Bse118I RCCGGY 1 cut(s) 250
Bse1I ACTGG 4 cut(s) 998, 1148, 2016, 2077
Bse8I GATNNNNATC 1 cut(s) 485
BseDI CCNNGG 1 cut(s) 735
BseGI GGATG 4 cut(s) 694, 909, 1225, 1838
BseJI GATNNNNATC 1 cut(s) 485
BseLI CCNNNNNNNGG 2 cut(s) 472, 2032
BseMII CTCAG 3 cut(s) 96, 762, 1346
BseNI ACTGG 4 cut(s) 998, 1148, 2016, 2077
BseRI GAGGAG 1 cut(s) 1724
BseXI GCAGC 4 cut(s) 33, 560, 939, 1303
BseYI CCCAGC 1 cut(s) 728
BsgI GTGCAG 1 cut(s) 1398
Bsh1236I CGCG 2 cut(s) 289, 295
Bsh1285I CGRYCG 3 cut(s) 293, 400, 1252
BshFI GGCC 4 cut(s) 8, 48, 959, 1028
BshNI GGYRCC 4 cut(s) 164, 184, 226, 307
BshTI ACCGGT 1 cut(s) 250
BsiEI CGRYCG 3 cut(s) 293, 400, 1252
BsiHKAI GWGCWC 2 cut(s) 908, 1731
BsiSI CCGG 3 cut(s) 251, 396, 1054
BslFI GGGAC 2 cut(s) 842, 1178
BslI CCNNNNNNNGG 2 cut(s) 472, 2032
BsmAI GTCTC 5 cut(s) 106, 115, 131, 1760, 1950
BsmFI GGGAC 2 cut(s) 842, 1178
BsmI GAATGC 2 cut(s) 730, 2102
BsnI GGCC 4 cut(s) 8, 48, 959, 1028
Bso31I GGTCTC 4 cut(s) 106, 115, 131, 1760
Bsp119I TTCGAA 1 cut(s) 1988
Bsp1286I GDGCHC 2 cut(s) 908, 1731
Bsp143I GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
Bsp1720I GCTNAGC 1 cut(s) 1456
Bsp68I TCGCGA 1 cut(s) 295
BspACI CCGC 8 cut(s) 5, 72, 141, 173, 215, 263, 289, 505
BspANI GGCC 4 cut(s) 8, 48, 959, 1028
BspCNI CTCAG 3 cut(s) 97, 763, 1347
BspFNI CGCG 2 cut(s) 289, 295
BspHI TCATGA 1 cut(s) 378
BspLI GGNNCC 9 cut(s) 9, 49, 166, 186, 228, 309, 733, 754, 1166
BspMI ACCTGC 1 cut(s) 346
BspPI GGATC 1 cut(s) 369
BspT104I TTCGAA 1 cut(s) 1988
BspT107I GGYRCC 4 cut(s) 164, 184, 226, 307
BspTNI GGTCTC 4 cut(s) 106, 115, 131, 1760
BsrFI RCCGGY 1 cut(s) 250
BsrI ACTGG 4 cut(s) 998, 1148, 2016, 2077
BssAI RCCGGY 1 cut(s) 250
BssECI CCNNGG 1 cut(s) 735
BssMI GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
Bst4CI ACNGT 3 cut(s) 100, 1092, 2126
Bst6I CTCTTC 1 cut(s) 1752
BstBI TTCGAA 1 cut(s) 1988
BstC8I GCNNGC 3 cut(s) 957, 1202, 2091
BstDEI CTNAG 5 cut(s) 105, 771, 914, 1355, 1456
BstF5I GGATG 4 cut(s) 694, 909, 1225, 1838
BstFNI CGCG 2 cut(s) 289, 295
BstH2I RGCGCY 1 cut(s) 883
BstHHI GCGC 1 cut(s) 882
BstKTI GATC 7 cut(s) 36, 364, 766, 819, 1252, 1270, 2142
BstMAI GTCTC 5 cut(s) 106, 115, 131, 1760, 1950
BstMBI GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
BstMCI CGRYCG 3 cut(s) 293, 400, 1252
BstMWI GCNNNNNNNGC 6 cut(s) 80, 149, 338, 557, 981, 1893
BstNSI RCATGY 3 cut(s) 654, 1963, 2152
BstSCI CCNGG 1 cut(s) 1052
BstSFI CTRYAG 3 cut(s) 1608, 1897, 2125
BstUI CGCG 2 cut(s) 289, 295
BstV1I GCAGC 4 cut(s) 33, 560, 939, 1303
BstV2I GAAGAC 3 cut(s) 1127, 1560, 1580
BstXI CCANNNNNNTGG 1 cut(s) 948
BsuI GTATCC 2 cut(s) 844, 1085
BsuRI GGCC 4 cut(s) 8, 48, 959, 1028
BtgZI GCGATG 1 cut(s) 549
BtrI CACGTC 1 cut(s) 832
BtsCI GGATG 4 cut(s) 694, 909, 1225, 1838
BtsIMutI CAGTG 2 cut(s) 929, 2009
BtuMI TCGCGA 1 cut(s) 295
BveI ACCTGC 1 cut(s) 346
Cac8I GCNNGC 3 cut(s) 957, 1202, 2091
CciI TCATGA 1 cut(s) 378
CfoI GCGC 1 cut(s) 882
Cfr10I RCCGGY 1 cut(s) 250
Cfr13I GGNCC 6 cut(s) 7, 47, 732, 958, 1056, 1165
CseI GACGC 1 cut(s) 1893
Csp6I GTAC 6 cut(s) 60, 185, 654, 1144, 1544, 1921
CspAI ACCGGT 1 cut(s) 250
CspCI CAANNNNNGTGG 2 cut(s) 1189, 1224
CviQI GTAC 6 cut(s) 60, 185, 654, 1144, 1544, 1921
DdeI CTNAG 5 cut(s) 105, 771, 914, 1355, 1456
DpnI GATC 7 cut(s) 35, 363, 765, 818, 1251, 1269, 2141
DpnII GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
DraI TTTAAA 2 cut(s) 748, 990
DraIII CACNNNGTG 1 cut(s) 2032
DriI GACNNNNNGTC 1 cut(s) 1054
Eam1104I CTCTTC 1 cut(s) 1752
Eam1105I GACNNNNNGTC 1 cut(s) 1054
EarI CTCTTC 1 cut(s) 1752
EciI GGCGGA 1 cut(s) 278
Eco31I GGTCTC 4 cut(s) 106, 115, 131, 1760
Eco47I GGWCC 3 cut(s) 732, 1056, 1165
Eco57I CTGAAG 3 cut(s) 493, 866, 1776
EcoO109I RGGNCCY 1 cut(s) 47
EcoT22I ATGCAT 1 cut(s) 652
FalI AAGNNNNNCTT 2 cut(s) 1565, 1597
FaqI GGGAC 2 cut(s) 842, 1178
FauNDI CATATG 1 cut(s) 1282
FbaI TGATCA 2 cut(s) 763, 2139
FblI GTMKAC 2 cut(s) 639, 741
Fnu4HI GCNGC 6 cut(s) 6, 22, 72, 549, 953, 1317
FokI GGATG 4 cut(s) 701, 896, 1232, 1845
Fsp4HI GCNGC 6 cut(s) 6, 22, 72, 549, 953, 1317
FspBI CTAG 2 cut(s) 1797, 1880
GlaI GCGC 1 cut(s) 881
GluI GCNGC 6 cut(s) 6, 22, 72, 549, 953, 1317
GsaI CCCAGC 1 cut(s) 732
GsuI CTGGAG 1 cut(s) 483
HaeII RGCGCY 1 cut(s) 883
HaeIII GGCC 4 cut(s) 8, 48, 959, 1028
HapII CCGG 3 cut(s) 251, 396, 1054
HgaI GACGC 1 cut(s) 1893
HhaI GCGC 1 cut(s) 882
Hin6I GCGC 1 cut(s) 880
HinP1I GCGC 1 cut(s) 880
HincII GTYRAC 2 cut(s) 742, 865
HindII GTYRAC 2 cut(s) 742, 865
HindIII AAGCTT 2 cut(s) 150, 1155
HinfI GANTC 5 cut(s) 448, 632, 1049, 1598, 1970
HpaII CCGG 3 cut(s) 251, 396, 1054
HphI GGTGA 6 cut(s) 327, 367, 596, 758, 1207, 1300
Hpy166II GTNNAC 6 cut(s) 631, 640, 742, 865, 897, 1132
Hpy188III TCNNGA 8 cut(s) 112, 294, 379, 500, 591, 1390, 1706, 2047
Hpy8I GTNNAC 6 cut(s) 631, 640, 742, 865, 897, 1132
Hpy99I CGWCG 1 cut(s) 100
HpyCH4III ACNGT 3 cut(s) 100, 1092, 2126
HpyCH4IV ACGT 2 cut(s) 831, 1919
HpyF10VI GCNNNNNNNGC 6 cut(s) 80, 149, 338, 557, 981, 1893
HpyF3I CTNAG 5 cut(s) 105, 771, 914, 1355, 1456
HpySE526I ACGT 2 cut(s) 831, 1919
HspAI GCGC 1 cut(s) 880
KpnI GGTACC 1 cut(s) 188
Ksp22I TGATCA 2 cut(s) 763, 2139
Kzo9I GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
LmnI GCTCC 2 cut(s) 29, 1734
Lsp1109I GCAGC 4 cut(s) 33, 560, 939, 1303
LweI GCATC 3 cut(s) 92, 679, 1633
MaeI CTAG 2 cut(s) 1797, 1880
MaeII ACGT 2 cut(s) 831, 1919
MaeIII GTNAC 7 cut(s) 695, 1664, 1682, 1815, 1865, 1907, 1943
MalI GATC 7 cut(s) 35, 363, 765, 818, 1251, 1269, 2141
MboI GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
MfeI CAATTG 1 cut(s) 561
MhlI GDGCHC 2 cut(s) 908, 1731
MluCI AATT 9 cut(s) 66, 121, 129, 219, 561, 600, 1000, 1786, 1855
MlyI GAGTC 3 cut(s) 626, 1043, 1592
MmeI TCCRAC 1 cut(s) 1314
Mph1103I ATGCAT 1 cut(s) 652
MroXI GAANNNNTTC 1 cut(s) 1227
MseI TTAA 6 cut(s) 159, 747, 824, 989, 1293, 1821
MslI CAYNNNNRTG 1 cut(s) 1012
MspA1I CMGCKG 2 cut(s) 1754, 2093
MspI CCGG 3 cut(s) 251, 396, 1054
MspR9I CCNGG 1 cut(s) 1054
MunI CAATTG 1 cut(s) 561
Mva1269I GAATGC 2 cut(s) 730, 2102
MvnI CGCG 2 cut(s) 289, 295
MwoI GCNNNNNNNGC 6 cut(s) 80, 149, 338, 557, 981, 1893
NciI CCSGG 1 cut(s) 1054
NdeI CATATG 1 cut(s) 1282
NdeII GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
NlaIV GGNNCC 9 cut(s) 9, 49, 166, 186, 228, 309, 733, 754, 1166
NmuCI GTSAC 3 cut(s) 695, 1815, 1865
NruI TCGCGA 1 cut(s) 295
NsiI ATGCAT 1 cut(s) 652
NspI RCATGY 3 cut(s) 654, 1963, 2152
NspV TTCGAA 1 cut(s) 1988
PagI TCATGA 1 cut(s) 378
PaqCI CACCTGC 1 cut(s) 346
PciI ACATGT 2 cut(s) 1959, 2148
PcsI WCGNNNNNNNCGW 1 cut(s) 92
PctI GAATGC 2 cut(s) 730, 2102
PdmI GAANNNNTTC 1 cut(s) 1227
PfeI GAWTC 2 cut(s) 448, 1970
PflFI GACNNNGTC 1 cut(s) 1385
PflMI CCANNNNNTGG 2 cut(s) 472, 2032
PinAI ACCGGT 1 cut(s) 250
PkrI GCNGC 6 cut(s) 7, 23, 73, 550, 954, 1318
Ple19I CGATCG 1 cut(s) 1252
PleI GAGTC 3 cut(s) 626, 1043, 1592
PpsI GAGTC 3 cut(s) 626, 1043, 1592
PscI ACATGT 2 cut(s) 1959, 2148
PspFI CCCAGC 1 cut(s) 728
PspN4I GGNNCC 9 cut(s) 9, 49, 166, 186, 228, 309, 733, 754, 1166
PspPI GGNCC 6 cut(s) 7, 47, 732, 958, 1056, 1165
PsyI GACNNNGTC 1 cut(s) 1385
PvuI CGATCG 1 cut(s) 1252
PvuII CAGCTG 2 cut(s) 1754, 2093
RruI TCGCGA 1 cut(s) 295
RsaI GTAC 6 cut(s) 61, 186, 655, 1145, 1545, 1922
RsaNI GTAC 6 cut(s) 60, 185, 654, 1144, 1544, 1921
RseI CAYNNNNRTG 1 cut(s) 1012
SalI GTCGAC 1 cut(s) 740
SaqAI TTAA 6 cut(s) 159, 747, 824, 989, 1293, 1821
SatI GCNGC 6 cut(s) 6, 22, 72, 549, 953, 1317
Sau3AI GATC 7 cut(s) 33, 361, 763, 816, 1249, 1267, 2139
Sau96I GGNCC 6 cut(s) 7, 47, 732, 958, 1056, 1165
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 3 cut(s) 626, 1043, 1592
ScrFI CCNGG 1 cut(s) 1054
SduI GDGCHC 2 cut(s) 908, 1731
SfaNI GCATC 3 cut(s) 92, 679, 1633
SfcI CTRYAG 3 cut(s) 1608, 1897, 2125
SfuI TTCGAA 1 cut(s) 1988
SinI GGWCC 3 cut(s) 732, 1056, 1165
SmiMI CAYNNNNRTG 1 cut(s) 1012
SmlI CTYRAG 1 cut(s) 1390
SmoI CTYRAG 1 cut(s) 1390
SpeI ACTAGT 1 cut(s) 1796
Sse9I AATT 9 cut(s) 66, 121, 129, 219, 561, 600, 1000, 1786, 1855
SsiI CCGC 8 cut(s) 5, 72, 141, 173, 215, 263, 289, 505
SspMI CTAG 2 cut(s) 1797, 1880
StyD4I CCNGG 1 cut(s) 1052
TaaI ACNGT 3 cut(s) 100, 1092, 2126
TaiI ACGT 2 cut(s) 834, 1922
TaqI TCGA 7 cut(s) 64, 113, 243, 364, 741, 1801, 1988
TasI AATT 9 cut(s) 66, 121, 129, 219, 561, 600, 1000, 1786, 1855
TatI WGTACW 3 cut(s) 59, 653, 1543
TauI GCSGC 2 cut(s) 8, 74
TfiI GAWTC 2 cut(s) 448, 1970
Tru1I TTAA 6 cut(s) 159, 747, 824, 989, 1293, 1821
Tru9I TTAA 6 cut(s) 159, 747, 824, 989, 1293, 1821
TscAI CASTG 2 cut(s) 936, 2016
TseFI GTSAC 3 cut(s) 695, 1815, 1865
TseI GCWGC 4 cut(s) 21, 548, 952, 1316
Tsp45I GTSAC 3 cut(s) 695, 1815, 1865
TspGWI ACGGA 4 cut(s) 479, 625, 684, 1845
TspRI CASTG 2 cut(s) 936, 2016
Tth111I GACNNNGTC 1 cut(s) 1385
Van91I CCANNNNNTGG 2 cut(s) 472, 2032
VpaK11BI GGWCC 3 cut(s) 732, 1056, 1165
XapI RAATTY 3 cut(s) 121, 600, 1786
XceI RCATGY 3 cut(s) 654, 1963, 2152
XcmI CCANNNNNNNNNTGG 1 cut(s) 1155
XmiI GTMKAC 2 cut(s) 639, 741
XmnI GAANNNNTTC 1 cut(s) 1227
XspI CTAG 2 cut(s) 1797, 1880
ZrmI AGTACT 1 cut(s) 61
Zsp2I ATGCAT 1 cut(s) 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.