FvH4_7g03531

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000269
Physical Location & Seq
Forward (+)
3901833 .. 3904527
2695 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g03531.t1

Sequence Viewer

Length: 1638 bp
ATGCCCCCTAAAAAGAAGACTGACCCTCCGACTCAAGGGGTTGATCAGAGCCAGAATTTAGGGGTAGACGAGGGAGGTACGAGAAGGAGTAGTAGGTTCCAGGGTTGTGTTCCAAGCAGTAACGAAAACACATTCTTCGACTGTCGGACCGCATTTGTTGTAGGATCGAAATCGGCGGCCAATGAAGCAAACCCTAAACGAGGAAGACCCTCCAAAAAGGGGGCATCCAATAGAACTGTGGCAGCGGATTCGGTGAATGAATATGCAGTGATTGGCCAGATTACAAAAGAAGTTGTGGCTGGGTCGTCGACACCCGAAATTGGGGAAGGGGCAGAGGAATCGGTTCATGTTGAGGAAGTGGTACCTCAAAACCAGATTGAAGTTCACACCACTCTGCGTGTTGAAACCGAGATGCATGTTAATGAAGATGTTATGCAGAGCAGAAAGGACGGGAGCTTCATCTCTCCACGCAAATTTGTTCATATTGGGAAGAAGAGGAGGGCCAATCATGGTTCGAGCTTGTTCAATTTCATATTAATTATGTTTCAGGTCCGCTTGGAGTTATCCCAGCAGTGGAAAGATCTTCCATTGGAGGAGAAGCAGAAGTACGTGCCGGAGGCAAATCCATTGGAGGACGATGTTGGGACTGAGGATTCTGTGGATCTGTTTAGCATAAACTGTCGATGCTCTCCAGAATGTTTCAAGAACTTAGTTTCTGGGTTTAGTGATGAGCAAAAGGCGGCGTGTAAAGCACTTGGTTTTGGTGTTTTACTAGGGATTGCTGGGAAGAGGCTGCGCAAGAGCACGGTGTGCTATCTTATGGAGTGTGTAGACCTCGCTAAATGTACTATAAAGATTCACGGGAAGACATTGGAAATCTCTCCCAATGACTTTAGTCAGGTGATGGGATTGAAGAATTCCAAGAAAGAGGTGGAATTTGTTGGTCCTATTAAAGATAACCCTGACCTCATGAATATAGTGCGAGAGTTCTCTACAAAGGAAGGCAAATCAATGATGGTTTTGAAGGATGTGGAGAACTACTTGAAGAATAAAGAAGCACCGGTGGATGAGAAGTTCAAGCGACTATTTGTGCTTTACACAATGTGCACAATCCTTACCCCTTCTGCCTCCCTAATGATACCACAGAAGTGGCTGCTGCCGTTGAGGGTTACGAGCCTCATACGCACATACAACTGGTCTGAACACGCTTTCAAGTATTTGATGAAAGGAATTAGTGAGTTCCAGAAGATACCCCAAGATACGCAGACCTCCAATAATCCACAAGTGAGGCAGACCTACATCAGCGGCTGCGTCCTTTTTTTGCAACTTTTTTACTTTGACTGCGTGGTGGCACCTAATCACTATGTGGATAGGTCAATGTACCCAGTTGAAGCTTGGGGGGATAGACAAGCCGACAAGGTTATGGCTTACACCAAAAGCAAAGGCGGTTTGATGTTTGCCCAAATAGAGGTGTGTAAGCCCGGTGATAGTGTTTGTGGAAGAAGTGAAGCAATTGATGAGGGATTGTCTCATAGGGTGGGTATTTTGGAGGAAAGCTTCAAGGAGTACAAGGCTCAGACATTAGAAAAGTTGGGGATGATACTGTCCGTGCTGGAAAAAATGTTGCCTAATGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

546

Amino Acids

61.04

Weight (kDa)

7.83

Isoelectric Point (pI)

45.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 797
Acc65I GGTACC 1 cut(s) 361
AccB1I GGYRCC 2 cut(s) 361, 1351
AccI GTMKAC 3 cut(s) 66, 308, 831
AciI CCGC 7 cut(s) 150, 176, 245, 553, 740, 1305, 1446
AclWI GGATC 2 cut(s) 172, 669
AcoI YGGCCR 2 cut(s) 177, 274
AcsI RAATTY 4 cut(s) 55, 473, 916, 935
AdeI CACNNNGTG 3 cut(s) 810, 1104, 1366
AfaI GTAC 6 cut(s) 79, 363, 608, 847, 1382, 1568
AfiI CCNNNNNNNGG 7 cut(s) 35, 200, 219, 320, 321, 573, 1468
AgeI ACCGGT 1 cut(s) 1060
AjnI CCWGG 1 cut(s) 99
AleI CACNNNNGTG 1 cut(s) 1147
AloI GAACNNNNNNTCC 2 cut(s) 1058, 1090
AluBI AGCT 4 cut(s) 456, 519, 1394, 1557
AluI AGCT 4 cut(s) 456, 519, 1394, 1557
Alw21I GWGCWC 2 cut(s) 806, 1109
Alw26I GTCTC 1 cut(s) 1533
Alw44I GTGCAC 1 cut(s) 1105
AlwI GGATC 2 cut(s) 172, 669
AlwNI CAGNNNCTG 1 cut(s) 1308
AoxI GGCC 3 cut(s) 177, 274, 501
ApaLI GTGCAC 1 cut(s) 1105
ApeKI GCWGC 5 cut(s) 242, 793, 1153, 1156, 1308
ApoI RAATTY 4 cut(s) 55, 473, 916, 935
AseI ATTAAT 1 cut(s) 536
AsiGI ACCGGT 1 cut(s) 1060
Asp700I GAANNNNTTC 1 cut(s) 342
Asp718I GGTACC 1 cut(s) 361
AspLEI GCGC 1 cut(s) 798
AspS9I GGNCC 4 cut(s) 147, 501, 550, 944
AsuC2I CCSGG 1 cut(s) 1482
AsuHPI GGTGA 3 cut(s) 265, 913, 1496
AvaII GGWCC 3 cut(s) 147, 550, 944
BaeGI GKGCMC 1 cut(s) 1109
BalI TGGCCA 1 cut(s) 276
BanI GGYRCC 2 cut(s) 361, 1351
BarI GAAGNNNNNNTAC 2 cut(s) 590, 622
BbsI GAAGAC 3 cut(s) 23, 211, 872
Bbv12I GWGCWC 2 cut(s) 806, 1109
BbvI GCAGC 5 cut(s) 254, 780, 1140, 1143, 1295
BccI CCATC 2 cut(s) 898, 1009
BceAI ACGGC 1 cut(s) 1144
BcgI CGANNNNNNTGC 4 cut(s) 231, 265, 321, 355
BciT130I CCWGG 1 cut(s) 101
BclI TGATCA 1 cut(s) 43
BcnI CCSGG 1 cut(s) 1482
BcoDI GTCTC 1 cut(s) 1533
BfaI CTAG 1 cut(s) 773
BglII AGATCT 1 cut(s) 580
BisI GCNGC 8 cut(s) 177, 243, 741, 794, 1154, 1157, 1306, 1309
BlsI GCNGC 8 cut(s) 178, 244, 742, 795, 1155, 1158, 1307, 1310
Bme1390I CCNGG 2 cut(s) 101, 1482
Bme18I GGWCC 3 cut(s) 147, 550, 944
BmgT120I GGNCC 4 cut(s) 147, 501, 550, 944
BmiI GGNNCC 3 cut(s) 98, 363, 1353
BmrFI CCNGG 2 cut(s) 101, 1482
BmrI ACTGGG 1 cut(s) 1379
BmsI GCATC 3 cut(s) 233, 402, 674
BmuI ACTGGG 1 cut(s) 1379
BoxI GACNNNNGTC 1 cut(s) 894
BpiI GAAGAC 3 cut(s) 23, 211, 872
BpmI CTGGAG 1 cut(s) 675
BpuEI CTTGAG 1 cut(s) 18
BpuMI CCSGG 1 cut(s) 1482
BsaAI YACGTR 1 cut(s) 610
BsaBI GATNNNNATC 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 100
BsaWI WCCGGW 1 cut(s) 1060
BsaXI ACNNNNNCTCC 2 cut(s) 10, 40
Bsc4I CCNNNNNNNGG 7 cut(s) 35, 200, 219, 320, 321, 573, 1468
Bse118I RCCGGY 1 cut(s) 1060
Bse1I ACTGG 2 cut(s) 1199, 1385
Bse8I GATNNNNATC 1 cut(s) 169
BseBI CCWGG 1 cut(s) 101
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 4 cut(s) 224, 1033, 1072, 1602
BseJI GATNNNNATC 1 cut(s) 169
BseLI CCNNNNNNNGG 7 cut(s) 35, 200, 219, 320, 321, 573, 1468
BseMII CTCAG 2 cut(s) 639, 1589
BseNI ACTGG 2 cut(s) 1199, 1385
BseRI GAGGAG 2 cut(s) 511, 608
BseSI GKGCMC 1 cut(s) 1109
BseXI GCAGC 5 cut(s) 254, 780, 1140, 1143, 1295
BseYI CCCAGC 3 cut(s) 299, 567, 782
BshFI GGCC 3 cut(s) 179, 276, 503
BshNI GGYRCC 2 cut(s) 361, 1351
BshTI ACCGGT 1 cut(s) 1060
BsiHKAI GWGCWC 2 cut(s) 806, 1109
BsiSI CCGG 3 cut(s) 614, 1061, 1482
BslFI GGGAC 1 cut(s) 658
BslI CCNNNNNNNGG 7 cut(s) 35, 200, 219, 320, 321, 573, 1468
BsmAI GTCTC 1 cut(s) 1533
BsmFI GGGAC 1 cut(s) 658
BsnI GGCC 3 cut(s) 179, 276, 503
Bsp1286I GDGCHC 2 cut(s) 806, 1109
Bsp143I GATC 4 cut(s) 43, 164, 580, 661
BspACI CCGC 7 cut(s) 150, 176, 245, 553, 740, 1305, 1446
BspANI GGCC 3 cut(s) 179, 276, 503
BspCNI CTCAG 2 cut(s) 640, 1588
BspHI TCATGA 1 cut(s) 969
BspLI GGNNCC 3 cut(s) 98, 363, 1353
BspPI GGATC 2 cut(s) 172, 669
BspT107I GGYRCC 2 cut(s) 361, 1351
BsrFI RCCGGY 1 cut(s) 1060
BsrI ACTGG 2 cut(s) 1199, 1385
BssAI RCCGGY 1 cut(s) 1060
BssECI CCNNGG 1 cut(s) 100
BssMI GATC 4 cut(s) 43, 164, 580, 661
Bst2UI CCWGG 1 cut(s) 101
Bst4CI ACNGT 5 cut(s) 143, 238, 680, 808, 1605
Bst6I CTCTTC 2 cut(s) 488, 782
BstAPI GCANNNNNTGC 1 cut(s) 810
BstBAI YACGTR 1 cut(s) 610
BstDEI CTNAG 3 cut(s) 648, 709, 1575
BstENI CCTNNNNNAGG 1 cut(s) 198
BstF5I GGATG 4 cut(s) 224, 1033, 1072, 1602
BstHHI GCGC 1 cut(s) 798
BstKTI GATC 4 cut(s) 46, 167, 583, 664
BstMAI GTCTC 1 cut(s) 1533
BstMBI GATC 4 cut(s) 43, 164, 580, 661
BstMWI GCNNNNNNNGC 4 cut(s) 185, 749, 810, 1182
BstNI CCWGG 1 cut(s) 101
BstNSI RCATGY 1 cut(s) 419
BstPAI GACNNNNGTC 1 cut(s) 894
BstSCI CCNGG 2 cut(s) 99, 1480
BstSLI GKGCMC 1 cut(s) 1109
BstV1I GCAGC 5 cut(s) 254, 780, 1140, 1143, 1295
BstV2I GAAGAC 3 cut(s) 23, 211, 872
BstX2I RGATCY 2 cut(s) 580, 661
BstXI CCANNNNNNTGG 1 cut(s) 1149
BstYI RGATCY 2 cut(s) 580, 661
BsuRI GGCC 3 cut(s) 179, 276, 503
BtsCI GGATG 4 cut(s) 224, 1033, 1072, 1602
BtsI GCAGTG 2 cut(s) 273, 578
BtsIMutI CAGTG 2 cut(s) 273, 578
CaiI CAGNNNCTG 1 cut(s) 1308
CciI TCATGA 1 cut(s) 969
CfoI GCGC 1 cut(s) 798
Cfr10I RCCGGY 1 cut(s) 1060
Cfr13I GGNCC 4 cut(s) 147, 501, 550, 944
CpoI CGGWCCG 1 cut(s) 147
CseI GACGC 1 cut(s) 1300
Csp6I GTAC 6 cut(s) 78, 362, 607, 846, 1381, 1567
CspAI ACCGGT 1 cut(s) 1060
CspI CGGWCCG 1 cut(s) 147
CviAII CATG 4 cut(s) 347, 416, 509, 970
CviQI GTAC 6 cut(s) 78, 362, 607, 846, 1381, 1567
DdeI CTNAG 3 cut(s) 648, 709, 1575
DpnI GATC 4 cut(s) 45, 166, 582, 663
DpnII GATC 4 cut(s) 43, 164, 580, 661
DraIII CACNNNGTG 3 cut(s) 810, 1104, 1366
EaeI YGGCCR 2 cut(s) 177, 274
Eam1104I CTCTTC 2 cut(s) 488, 782
EarI CTCTTC 2 cut(s) 488, 782
Eco47I GGWCC 3 cut(s) 147, 550, 944
EcoNI CCTNNNNNAGG 1 cut(s) 198
EcoRI GAATTC 1 cut(s) 916
EcoRII CCWGG 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 417
FaeI CATG 4 cut(s) 350, 419, 512, 973
FaqI GGGAC 1 cut(s) 658
FatI CATG 4 cut(s) 346, 415, 508, 969
FbaI TGATCA 1 cut(s) 43
FblI GTMKAC 3 cut(s) 66, 308, 831
Fnu4HI GCNGC 8 cut(s) 177, 243, 741, 794, 1154, 1157, 1306, 1309
FokI GGATG 4 cut(s) 211, 1040, 1079, 1609
Fsp4HI GCNGC 8 cut(s) 177, 243, 741, 794, 1154, 1157, 1306, 1309
FspBI CTAG 1 cut(s) 773
FspI TGCGCA 1 cut(s) 797
GlaI GCGC 1 cut(s) 797
GluI GCNGC 8 cut(s) 177, 243, 741, 794, 1154, 1157, 1306, 1309
GsaI CCCAGC 3 cut(s) 303, 571, 786
GsuI CTGGAG 1 cut(s) 675
HaeIII GGCC 3 cut(s) 179, 276, 503
HapII CCGG 3 cut(s) 614, 1061, 1482
HgaI GACGC 1 cut(s) 1300
HhaI GCGC 1 cut(s) 798
Hin1II CATG 4 cut(s) 350, 419, 512, 973
Hin6I GCGC 1 cut(s) 796
HinP1I GCGC 1 cut(s) 796
HincII GTYRAC 1 cut(s) 309
HindII GTYRAC 1 cut(s) 309
HindIII AAGCTT 2 cut(s) 1392, 1555
HinfI GANTC 5 cut(s) 31, 248, 338, 653, 856
HpaII CCGG 3 cut(s) 614, 1061, 1482
HphI GGTGA 3 cut(s) 265, 913, 1496
Hpy166II GTNNAC 5 cut(s) 67, 309, 385, 832, 1107
Hpy188I TCNGA 5 cut(s) 30, 48, 147, 1201, 1578
Hpy188III TCNNGA 4 cut(s) 692, 703, 970, 1243
Hpy8I GTNNAC 5 cut(s) 67, 309, 385, 832, 1107
Hpy99I CGWCG 1 cut(s) 310
HpyAV CCTTC 5 cut(s) 78, 320, 995, 1018, 1131
HpyCH4III ACNGT 5 cut(s) 143, 238, 680, 808, 1605
HpyCH4IV ACGT 1 cut(s) 609
HpyCH4V TGCA 5 cut(s) 266, 415, 436, 1107, 1324
HpyF10VI GCNNNNNNNGC 4 cut(s) 185, 749, 810, 1182
HpyF3I CTNAG 3 cut(s) 648, 709, 1575
HpySE526I ACGT 1 cut(s) 609
Hsp92II CATG 4 cut(s) 350, 419, 512, 973
HspAI GCGC 1 cut(s) 796
KpnI GGTACC 1 cut(s) 365
Ksp22I TGATCA 1 cut(s) 43
Kzo9I GATC 4 cut(s) 43, 164, 580, 661
LmnI GCTCC 1 cut(s) 453
Lsp1109I GCAGC 5 cut(s) 254, 780, 1140, 1143, 1295
LweI GCATC 3 cut(s) 233, 402, 674
MaeI CTAG 1 cut(s) 773
MaeII ACGT 1 cut(s) 609
MaeIII GTNAC 2 cut(s) 119, 1168
MalI GATC 4 cut(s) 45, 166, 582, 663
MboI GATC 4 cut(s) 43, 164, 580, 661
MfeI CAATTG 1 cut(s) 1512
MflI RGATCY 2 cut(s) 580, 661
MhlI GDGCHC 2 cut(s) 806, 1109
MlsI TGGCCA 1 cut(s) 276
MluCI AATT 9 cut(s) 55, 318, 473, 526, 537, 916, 935, 1230, 1512
MluNI TGGCCA 1 cut(s) 276
MlyI GAGTC 1 cut(s) 25
MmeI TCCRAC 2 cut(s) 53, 125
Mox20I TGGCCA 1 cut(s) 276
Mph1103I ATGCAT 1 cut(s) 417
MroXI GAANNNNTTC 1 cut(s) 342
MscI TGGCCA 1 cut(s) 276
MseI TTAA 3 cut(s) 420, 536, 951
MslI CAYNNNNRTG 2 cut(s) 420, 1147
Msp20I TGGCCA 1 cut(s) 276
MspA1I CMGCKG 2 cut(s) 245, 1305
MspI CCGG 3 cut(s) 614, 1061, 1482
MspR9I CCNGG 2 cut(s) 101, 1482
MunI CAATTG 1 cut(s) 1512
MvaI CCWGG 1 cut(s) 101
MwoI GCNNNNNNNGC 4 cut(s) 185, 749, 810, 1182
NciI CCSGG 1 cut(s) 1482
NdeII GATC 4 cut(s) 43, 164, 580, 661
NlaIII CATG 4 cut(s) 350, 419, 512, 973
NlaIV GGNNCC 3 cut(s) 98, 363, 1353
NsbI TGCGCA 1 cut(s) 797
NsiI ATGCAT 1 cut(s) 417
NspI RCATGY 1 cut(s) 419
OliI CACNNNNGTG 1 cut(s) 1147
PagI TCATGA 1 cut(s) 969
PdmI GAANNNNTTC 1 cut(s) 342
PfeI GAWTC 4 cut(s) 248, 338, 653, 856
PinAI ACCGGT 1 cut(s) 1060
PkrI GCNGC 8 cut(s) 178, 244, 742, 795, 1155, 1158, 1307, 1310
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
Ppu21I YACGTR 1 cut(s) 610
PshAI GACNNNNGTC 1 cut(s) 894
PshBI ATTAAT 1 cut(s) 536
Psp6I CCWGG 1 cut(s) 99
PspFI CCCAGC 3 cut(s) 299, 567, 782
PspGI CCWGG 1 cut(s) 99
PspN4I GGNNCC 3 cut(s) 98, 363, 1353
PspPI GGNCC 4 cut(s) 147, 501, 550, 944
PstNI CAGNNNCTG 1 cut(s) 1308
PsuI RGATCY 2 cut(s) 580, 661
RsaI GTAC 6 cut(s) 79, 363, 608, 847, 1382, 1568
RsaNI GTAC 6 cut(s) 78, 362, 607, 846, 1381, 1567
RseI CAYNNNNRTG 2 cut(s) 420, 1147
Rsr2I CGGWCCG 1 cut(s) 147
RsrII CGGWCCG 1 cut(s) 147
SalI GTCGAC 1 cut(s) 307
SaqAI TTAA 3 cut(s) 420, 536, 951
SatI GCNGC 8 cut(s) 177, 243, 741, 794, 1154, 1157, 1306, 1309
Sau3AI GATC 4 cut(s) 43, 164, 580, 661
Sau96I GGNCC 4 cut(s) 147, 501, 550, 944
SchI GAGTC 1 cut(s) 25
ScrFI CCNGG 2 cut(s) 101, 1482
SduI GDGCHC 2 cut(s) 806, 1109
SfaNI GCATC 3 cut(s) 233, 402, 674
SgrAI CRCCGGYG 1 cut(s) 1060
SinI GGWCC 3 cut(s) 147, 550, 944
SmiMI CAYNNNNRTG 2 cut(s) 420, 1147
SmlI CTYRAG 1 cut(s) 33
SmoI CTYRAG 1 cut(s) 33
Sse9I AATT 9 cut(s) 55, 318, 473, 526, 537, 916, 935, 1230, 1512
SsiI CCGC 7 cut(s) 150, 176, 245, 553, 740, 1305, 1446
SspMI CTAG 1 cut(s) 773
StyD4I CCNGG 2 cut(s) 99, 1480
TaaI ACNGT 5 cut(s) 143, 238, 680, 808, 1605
TaiI ACGT 1 cut(s) 612
TaqI TCGA 5 cut(s) 138, 167, 308, 515, 682
TasI AATT 9 cut(s) 55, 318, 473, 526, 537, 916, 935, 1230, 1512
TatI WGTACW 2 cut(s) 845, 1566
TauI GCSGC 3 cut(s) 179, 743, 1308
TfiI GAWTC 4 cut(s) 248, 338, 653, 856
Tru1I TTAA 3 cut(s) 420, 536, 951
Tru9I TTAA 3 cut(s) 420, 536, 951
TscAI CASTG 2 cut(s) 273, 578
TseI GCWGC 5 cut(s) 242, 793, 1153, 1156, 1308
TspDTI ATGAA 9 cut(s) 198, 273, 335, 438, 448, 470, 520, 986, 1238
TspGWI ACGGA 1 cut(s) 1597
TspRI CASTG 2 cut(s) 273, 578
VneI GTGCAC 1 cut(s) 1105
VpaK11BI GGWCC 3 cut(s) 147, 550, 944
VspI ATTAAT 1 cut(s) 536
XagI CCTNNNNNAGG 1 cut(s) 198
XapI RAATTY 4 cut(s) 55, 473, 916, 935
XceI RCATGY 1 cut(s) 419
XcmI CCANNNNNNNNNTGG 3 cut(s) 235, 928, 1392
XmiI GTMKAC 3 cut(s) 66, 308, 831
XmnI GAANNNNTTC 1 cut(s) 342
XspI CTAG 1 cut(s) 773
Zsp2I ATGCAT 1 cut(s) 417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.