FvH4_2g04883

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb2
OG0000269
Physical Location & Seq
Reverse (-)
3808544 .. 3811357
2814 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_2g04883.t1

Sequence Viewer

Length: 1869 bp
ATGGCTAGATCGAAGATCCGCGCCCGAAACCCAGCCTTTCCTAGCCGGCGGAGTCAGAGGCTTAATAAATCGGCCTCTTCTACCGAAATGGATGACACCTCCAATCCATCGAAGAGGGCTCGACCATCACCAACTGATGGTGTAGATGCCTCTGCCTCTATCTCTAACTCTGTCATCGACGTTCCCGGATCGTCGTCTGAGGCTGCGCGCATGAACGATTCCCAACGTGGACCTGTATCTTCACTGGAAGAGGGCCCGATTCCCAAGACGGGGTCGGAACGAGGGAGCGATGTGTGTCAACCAATAGAGGAAGGAGACGAAGACGAGGAGGATAATGAAGATCACCGTGAAGAGGGAGAAGATCATTTTGATGATGCGAAAGGGCAAGTGGCTGGCGACCGTGTGGTCTTCCGGAAGAGGAATAAAGTCACTGGGAAACAACTGAGTTTCTTCAACTACGTGAACGTACACCTAAAGTCAGGGAATGTGCCGAAGAACCAAGTTCACGACTTCAAGTTGAGCCTATCTCAGAAATGGAAGGAACTTCTGCCGGAAGAGAAGGCAAATTACGTCCACCCTGATAAAGAGGGTTACTCGTCAGCTTCTTATTCCGAGGGAAGTGCACCAGCGGTCTACAAGGTAGACACTCGCACATCTCCGCACCGGTTCAAGAGTTTGATCGGAGAGTTTAATGAAGAGAAGTTAGCTGCTTGCAGGGAGCTCGGTTTTGGCCCTCTCTTGAAGTTGGCTATTACTAAGATGCACCTTTCCATTCTGAGGCTCATAGTCGATGCCACTAGTGCCTCAAATAAAAGTATAACTATGCATGGGACCAAGCTTCCACTCTCAGCCAATGATGTGGAGAATGTGATGGGTTTGAAGAATGGCGGATCCCCGGTTGTCTTTGAGGGGCATGTGAAAGATTATACGGAGTTGGAGGCCATTGCAAATGAGATGGCGGGGCCTGACCACAAGATCCAACTCGCCAAGTTGGGGGGTATGCTTGACTCGCGGGTTGGTTGGAAGAAGGTTGGGGGGCGTGTGCGCATGGACAATGTTGCACTCGGGGTTAGTAGGCAGGAGTTCGATTTGGCGATGGGTAGAGTCGGTCGATTGGAAGACCAAGTGCGCAACATAGGGGCAGAAATGGGGCAAGGTTTTGCTGCCATCATTAGTAGGCTCGACTCCATGGGTGCAGCGGGTCCATCAAAGGCAAAAGGGAGAGGGAAGAAGAAAGAGTGTAATGTGTTGGAACAATGGAACCCCTTGAACAATGTTGAAATCCATAAGGCCACTTTGTTGTTGGTACCGGTAGATTTGGACCGGTCACCGCCGAAAAAAAAAGTCACTGTCATCCTCTCGGACTCGACATCGATTGTGAGCCCCGAGAAAAAAGAAATCCCCAAACCTAATCCCTTTGAGGGGAAGAATAGAAGGATTAATATTGGCTCATTTCGTGTCTATGGTGACAGAGATGTGATTGACAAAGGCGTAGTTACAAACGTATGCGACCCATGCTCGGCCAAAGAACTTGTCGAGAAGATTGTGCTCAGCACAACCGGCGACATATGGGCTACTAGAAAACATATTAAGACACTACAACCAAACCAATGGGTAGTGGATGATGTCATCAACATGTTTTTGAACTATCTTAACCAAGAACAAAATGAGAGAGATAAAACTCCGAGGTCACACTTCTTGGATACTTGCTTTGCTCAAAAGATACAAAGTCATTTGGAGGGGGTAAGTAAAGGTCTTCTTACGGGTTTTCCATCGAAAAGGAGTTTGGGTATGAGATCCCTCCAGAAAACAATTGTACAATGCGACAAGGTAATTCTTACCACCTATCCTGTTCGTTTATCAAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

623

Amino Acids

68.63

Weight (kDa)

8.93

Isoelectric Point (pI)

43.75

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 404
Acc16I TGCGCA 2 cut(s) 1046, 1130
Acc65I GGTACC 1 cut(s) 1306
AccB1I GGYRCC 1 cut(s) 1306
AccB7I CCANNNNNTGG 1 cut(s) 137
AccI GTMKAC 2 cut(s) 633, 642
AccII CGCG 3 cut(s) 21, 208, 1012
AccIII TCCGGA 1 cut(s) 411
AciI CCGC 9 cut(s) 19, 49, 629, 659, 888, 959, 1012, 1199, 1331
AclWI GGATC 6 cut(s) 10, 196, 885, 898, 970, 1791
AcoI YGGCCR 1 cut(s) 1521
AfaI GTAC 3 cut(s) 468, 1308, 1818
AfiI CCNNNNNNNGG 9 cut(s) 137, 269, 270, 352, 777, 993, 1421, 1422, 1519
AflIII ACRYGT 1 cut(s) 1635
AgeI ACCGGT 3 cut(s) 663, 1309, 1323
AgsI TTSAA 8 cut(s) 454, 514, 670, 742, 880, 1270, 1280, 1645
AhlI ACTAGT 1 cut(s) 797
AjuI GAANNNNNNNTTGG 2 cut(s) 1769, 1801
AluBI AGCT 4 cut(s) 602, 707, 721, 838
AluI AGCT 4 cut(s) 602, 707, 721, 838
Alw21I GWGCWC 3 cut(s) 625, 723, 1551
Alw26I GTCTC 1 cut(s) 309
Alw44I GTGCAC 1 cut(s) 621
AlwI GGATC 6 cut(s) 10, 196, 885, 898, 970, 1791
Ama87I CYCGRG 2 cut(s) 1064, 1385
Aor13HI TCCGGA 1 cut(s) 411
AoxI GGCC 7 cut(s) 72, 253, 730, 939, 962, 1290, 1521
ApaI GGGCCC 1 cut(s) 257
ApaLI GTGCAC 1 cut(s) 621
ApeKI GCWGC 4 cut(s) 203, 707, 1163, 1196
ArsI GACNNNNNNTTYG 2 cut(s) 1518, 1550
AseI ATTAAT 1 cut(s) 1440
AsiGI ACCGGT 3 cut(s) 663, 1309, 1323
Asp718I GGTACC 1 cut(s) 1306
AspLEI GCGC 5 cut(s) 23, 208, 210, 1047, 1131
AspS9I GGNCC 8 cut(s) 230, 253, 254, 731, 831, 962, 1202, 1321
AsuC2I CCSGG 2 cut(s) 186, 896
AsuHPI GGTGA 4 cut(s) 120, 335, 1320, 1478
AvaI CYCGRG 2 cut(s) 1064, 1385
AvaII GGWCC 4 cut(s) 230, 831, 1202, 1321
BaeGI GKGCMC 2 cut(s) 257, 625
BamHI GGATCC 1 cut(s) 890
BanI GGYRCC 1 cut(s) 1306
BanII GRGCYC 4 cut(s) 121, 257, 723, 1385
BarI GAAGNNNNNNTAC 2 cut(s) 551, 583
BbsI GAAGAC 4 cut(s) 327, 400, 1125, 1748
Bbv12I GWGCWC 3 cut(s) 625, 723, 1551
BbvI GCAGC 4 cut(s) 190, 694, 1150, 1208
BccI CCATC 9 cut(s) 115, 131, 133, 865, 949, 1090, 1175, 1213, 1780
BcgI CGANNNNNNTGC 4 cut(s) 602, 636, 703, 737
BciVI GTATCC 1 cut(s) 1696
BcnI CCSGG 2 cut(s) 186, 896
BcoDI GTCTC 1 cut(s) 309
BcuI ACTAGT 1 cut(s) 797
BfaI CTAG 4 cut(s) 6, 42, 798, 1578
BfuI GTATCC 1 cut(s) 1696
BisI GCNGC 4 cut(s) 204, 708, 1164, 1197
BlpI GCTNAGC 1 cut(s) 1550
BlsI GCNGC 4 cut(s) 205, 709, 1165, 1198
Bme1390I CCNGG 2 cut(s) 186, 896
Bme18I GGWCC 4 cut(s) 230, 831, 1202, 1321
BmeT110I CYCGRG 2 cut(s) 1064, 1385
BmgT120I GGNCC 8 cut(s) 230, 253, 254, 731, 831, 962, 1202, 1321
BmiI GGNNCC 7 cut(s) 255, 832, 892, 963, 1203, 1262, 1308
BmrFI CCNGG 2 cut(s) 186, 896
BmrI ACTGGG 1 cut(s) 441
BmsI GCATC 4 cut(s) 136, 364, 750, 781
BmuI ACTGGG 1 cut(s) 441
BpiI GAAGAC 4 cut(s) 327, 400, 1125, 1748
BplI GAGNNNNNCTC 4 cut(s) 511, 543, 578, 610
BpmI CTGGAG 1 cut(s) 1787
Bpu1102I GCTNAGC 1 cut(s) 1550
BpuMI CCSGG 2 cut(s) 186, 896
Bsa29I ATCGAT 1 cut(s) 1373
BsaAI YACGTR 1 cut(s) 460
BsaJI CCNNGG 4 cut(s) 612, 894, 1188, 1685
BsaWI WCCGGW 4 cut(s) 411, 663, 1309, 1323
BsaXI ACNNNNNCTCC 2 cut(s) 1774, 1804
Bsc4I CCNNNNNNNGG 9 cut(s) 137, 269, 270, 352, 777, 993, 1421, 1422, 1519
Bse118I RCCGGY 5 cut(s) 45, 663, 1309, 1323, 1559
Bse1I ACTGG 2 cut(s) 249, 436
Bse3DI GCAATG 1 cut(s) 942
BseAI TCCGGA 1 cut(s) 411
BseCI ATCGAT 1 cut(s) 1373
BseDI CCNNGG 4 cut(s) 612, 894, 1188, 1685
BseGI GGATG 3 cut(s) 97, 1353, 1627
BseLI CCNNNNNNNGG 9 cut(s) 137, 269, 270, 352, 777, 993, 1421, 1422, 1519
BseMI GCAATG 1 cut(s) 942
BseMII CTCAG 6 cut(s) 189, 434, 542, 767, 861, 1564
BseNI ACTGG 2 cut(s) 249, 436
BsePI GCGCGC 1 cut(s) 206
BseRI GAGGAG 1 cut(s) 341
BseSI GKGCMC 2 cut(s) 257, 625
BseXI GCAGC 4 cut(s) 190, 694, 1150, 1208
BseYI CCCAGC 1 cut(s) 31
BsgI GTGCAG 1 cut(s) 1215
Bsh1236I CGCG 3 cut(s) 21, 208, 1012
Bsh1285I CGRYCG 2 cut(s) 400, 1111
BshFI GGCC 7 cut(s) 74, 255, 732, 941, 964, 1292, 1523
BshNI GGYRCC 1 cut(s) 1306
BshTI ACCGGT 3 cut(s) 663, 1309, 1323
BshVI ATCGAT 1 cut(s) 1373
BsiEI CGRYCG 2 cut(s) 400, 1111
BsiHKAI GWGCWC 3 cut(s) 625, 723, 1551
BsiHKCI CYCGRG 2 cut(s) 1064, 1385
BsiSI CCGG 9 cut(s) 46, 186, 412, 551, 664, 896, 1310, 1324, 1560
BslFI GGGAC 1 cut(s) 844
BslI CCNNNNNNNGG 9 cut(s) 137, 269, 270, 352, 777, 993, 1421, 1422, 1519
BsmAI GTCTC 1 cut(s) 309
BsmBI CGTCTC 1 cut(s) 309
BsmFI GGGAC 1 cut(s) 844
BsnI GGCC 7 cut(s) 74, 255, 732, 941, 964, 1292, 1523
BsoBI CYCGRG 2 cut(s) 1064, 1385
Bsp120I GGGCCC 1 cut(s) 253
Bsp1286I GDGCHC 6 cut(s) 121, 257, 625, 723, 1385, 1551
Bsp13I TCCGGA 1 cut(s) 411
Bsp1407I TGTACA 1 cut(s) 1816
Bsp143I GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
Bsp1720I GCTNAGC 1 cut(s) 1550
Bsp19I CCATGG 1 cut(s) 1188
BspACI CCGC 9 cut(s) 19, 49, 629, 659, 888, 959, 1012, 1199, 1331
BspANI GGCC 7 cut(s) 74, 255, 732, 941, 964, 1292, 1523
BspCNI CTCAG 6 cut(s) 190, 435, 541, 768, 860, 1563
BspDI ATCGAT 1 cut(s) 1373
BspEI TCCGGA 1 cut(s) 411
BspFNI CGCG 3 cut(s) 21, 208, 1012
BspLI GGNNCC 7 cut(s) 255, 832, 892, 963, 1203, 1262, 1308
BspPI GGATC 6 cut(s) 10, 196, 885, 898, 970, 1791
BspT107I GGYRCC 1 cut(s) 1306
BsrDI GCAATG 1 cut(s) 942
BsrFI RCCGGY 5 cut(s) 45, 663, 1309, 1323, 1559
BsrGI TGTACA 1 cut(s) 1816
BsrI ACTGG 2 cut(s) 249, 436
BssAI RCCGGY 5 cut(s) 45, 663, 1309, 1323, 1559
BssECI CCNNGG 4 cut(s) 612, 894, 1188, 1685
BssHII GCGCGC 1 cut(s) 206
BssMI GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
BssT1I CCWWGG 1 cut(s) 1188
Bst4CI ACNGT 3 cut(s) 347, 401, 1351
Bst6I CTCTTC 7 cut(s) 82, 107, 243, 345, 410, 549, 690
BstAUI TGTACA 1 cut(s) 1816
BstBAI YACGTR 1 cut(s) 460
BstC8I GCNNGC 4 cut(s) 47, 208, 394, 712
BstDEI CTNAG 7 cut(s) 198, 443, 528, 756, 776, 847, 1550
BstDSI CCRYGG 1 cut(s) 1188
BstEII GGTNACC 1 cut(s) 1326
BstF5I GGATG 3 cut(s) 97, 1353, 1627
BstFNI CGCG 3 cut(s) 21, 208, 1012
BstHHI GCGC 5 cut(s) 23, 208, 210, 1047, 1131
BstKTI GATC 9 cut(s) 11, 18, 191, 343, 364, 681, 893, 978, 1799
BstMAI GTCTC 1 cut(s) 309
BstMBI GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
BstMCI CGRYCG 2 cut(s) 400, 1111
BstMWI GCNNNNNNNGC 4 cut(s) 800, 1009, 1515, 1560
BstNSI RCATGY 2 cut(s) 917, 1639
BstPI GGTNACC 1 cut(s) 1326
BstSCI CCNGG 2 cut(s) 184, 894
BstSLI GKGCMC 2 cut(s) 257, 625
BstUI CGCG 3 cut(s) 21, 208, 1012
BstV1I GCAGC 4 cut(s) 190, 694, 1150, 1208
BstV2I GAAGAC 4 cut(s) 327, 400, 1125, 1748
BstX2I RGATCY 4 cut(s) 15, 890, 975, 1796
BstXI CCANNNNNNTGG 2 cut(s) 859, 1611
BstYI RGATCY 4 cut(s) 15, 890, 975, 1796
Bsu15I ATCGAT 1 cut(s) 1373
BsuI GTATCC 1 cut(s) 1696
BsuRI GGCC 7 cut(s) 74, 255, 732, 941, 964, 1292, 1523
BsuTUI ATCGAT 1 cut(s) 1373
BtgI CCRYGG 1 cut(s) 1188
BtgZI GCGATG 2 cut(s) 303, 1109
BtsCI GGATG 3 cut(s) 97, 1353, 1627
BtsIMutI CAGTG 3 cut(s) 242, 429, 1347
Cac8I GCNNGC 4 cut(s) 47, 208, 394, 712
CfoI GCGC 5 cut(s) 23, 208, 210, 1047, 1131
Cfr10I RCCGGY 5 cut(s) 45, 663, 1309, 1323, 1559
Cfr13I GGNCC 8 cut(s) 230, 253, 254, 731, 831, 962, 1202, 1321
ClaI ATCGAT 1 cut(s) 1373
Csp6I GTAC 3 cut(s) 467, 1307, 1817
CspAI ACCGGT 3 cut(s) 663, 1309, 1323
CviAII CATG 7 cut(s) 211, 827, 914, 1048, 1189, 1515, 1636
CviQI GTAC 3 cut(s) 467, 1307, 1817
DdeI CTNAG 7 cut(s) 198, 443, 528, 756, 776, 847, 1550
DpnI GATC 9 cut(s) 10, 17, 190, 342, 363, 680, 892, 977, 1798
DpnII GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
DrdI GACNNNNNNGTC 1 cut(s) 404
DseDI GACNNNNNNGTC 1 cut(s) 404
EaeI YGGCCR 1 cut(s) 1521
Eam1104I CTCTTC 7 cut(s) 82, 107, 243, 345, 410, 549, 690
EarI CTCTTC 7 cut(s) 82, 107, 243, 345, 410, 549, 690
EciI GGCGGA 2 cut(s) 64, 903
Ecl136II GAGCTC 1 cut(s) 721
Eco130I CCWWGG 1 cut(s) 1188
Eco24I GRGCYC 4 cut(s) 121, 257, 723, 1385
Eco47I GGWCC 4 cut(s) 230, 831, 1202, 1321
Eco53kI GAGCTC 1 cut(s) 721
Eco88I CYCGRG 2 cut(s) 1064, 1385
Eco91I GGTNACC 1 cut(s) 1326
EcoICRI GAGCTC 1 cut(s) 721
EcoO109I RGGNCCY 2 cut(s) 253, 962
EcoO65I GGTNACC 1 cut(s) 1326
EcoT14I CCWWGG 1 cut(s) 1188
EcoT22I ATGCAT 1 cut(s) 828
EcoT38I GRGCYC 4 cut(s) 121, 257, 723, 1385
ErhI CCWWGG 1 cut(s) 1188
Esp3I CGTCTC 1 cut(s) 309
FaeI CATG 7 cut(s) 214, 830, 917, 1051, 1192, 1518, 1639
FalI AAGNNNNNCTT 2 cut(s) 1743, 1775
FaqI GGGAC 1 cut(s) 844
FatI CATG 7 cut(s) 210, 826, 913, 1047, 1188, 1514, 1635
FauI CCCGC 3 cut(s) 952, 1005, 1192
FauNDI CATATG 1 cut(s) 1568
FblI GTMKAC 2 cut(s) 633, 642
Fnu4HI GCNGC 4 cut(s) 204, 708, 1164, 1197
FokI GGATG 3 cut(s) 104, 1340, 1634
FriOI GRGCYC 4 cut(s) 121, 257, 723, 1385
Fsp4HI GCNGC 4 cut(s) 204, 708, 1164, 1197
FspAI RTGCGCAY 1 cut(s) 1046
FspBI CTAG 4 cut(s) 6, 42, 798, 1578
FspI TGCGCA 2 cut(s) 1046, 1130
GlaI GCGC 5 cut(s) 22, 207, 209, 1046, 1130
GluI GCNGC 4 cut(s) 204, 708, 1164, 1197
GsaI CCCAGC 1 cut(s) 35
GsuI CTGGAG 1 cut(s) 1787
HaeIII GGCC 7 cut(s) 74, 255, 732, 941, 964, 1292, 1523
HapII CCGG 9 cut(s) 46, 186, 412, 551, 664, 896, 1310, 1324, 1560
HhaI GCGC 5 cut(s) 23, 208, 210, 1047, 1131
Hin1II CATG 7 cut(s) 214, 830, 917, 1051, 1192, 1518, 1639
Hin6I GCGC 5 cut(s) 21, 206, 208, 1045, 1129
HinP1I GCGC 5 cut(s) 21, 206, 208, 1045, 1129
HincII GTYRAC 1 cut(s) 299
HindII GTYRAC 1 cut(s) 299
HindIII AAGCTT 1 cut(s) 836
HinfI GANTC 7 cut(s) 52, 218, 259, 1007, 1104, 1184, 1364
HpaII CCGG 9 cut(s) 46, 186, 412, 551, 664, 896, 1310, 1324, 1560
HphI GGTGA 4 cut(s) 120, 335, 1320, 1478
Hpy166II GTNNAC 9 cut(s) 230, 299, 463, 469, 505, 574, 623, 634, 643
Hpy188I TCNGA 9 cut(s) 57, 199, 277, 531, 613, 683, 777, 1363, 1686
Hpy188III TCNNGA 6 cut(s) 412, 506, 670, 739, 1537, 1804
Hpy8I GTNNAC 9 cut(s) 230, 299, 463, 469, 505, 574, 623, 634, 643
Hpy99I CGWCG 2 cut(s) 182, 196
HpyAV CCTTC 5 cut(s) 305, 532, 553, 1021, 1428
HpyCH4III ACNGT 3 cut(s) 347, 401, 1351
HpyCH4IV ACGT 6 cut(s) 180, 226, 459, 465, 570, 1503
HpyCH4V TGCA 7 cut(s) 623, 714, 763, 826, 947, 1061, 1196
HpyF10VI GCNNNNNNNGC 4 cut(s) 800, 1009, 1515, 1560
HpyF3I CTNAG 7 cut(s) 198, 443, 528, 756, 776, 847, 1550
HpySE526I ACGT 6 cut(s) 180, 226, 459, 465, 570, 1503
Hsp92II CATG 7 cut(s) 214, 830, 917, 1051, 1192, 1518, 1639
HspAI GCGC 5 cut(s) 21, 206, 208, 1045, 1129
Kpn2I TCCGGA 1 cut(s) 411
KpnI GGTACC 1 cut(s) 1310
KroI GCCGGC 1 cut(s) 45
KroNI GCCGGC 1 cut(s) 47
Kzo9I GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
LmnI GCTCC 2 cut(s) 285, 718
Lsp1109I GCAGC 4 cut(s) 190, 694, 1150, 1208
LweI GCATC 4 cut(s) 136, 364, 750, 781
MaeI CTAG 4 cut(s) 6, 42, 798, 1578
MaeII ACGT 6 cut(s) 180, 226, 459, 465, 570, 1503
MaeIII GTNAC 7 cut(s) 427, 590, 1326, 1345, 1466, 1495, 1689
MalI GATC 9 cut(s) 10, 17, 190, 342, 363, 680, 892, 977, 1798
MboI GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
MfeI CAATTG 1 cut(s) 1812
MflI RGATCY 4 cut(s) 15, 890, 975, 1796
MhlI GDGCHC 6 cut(s) 121, 257, 625, 723, 1385, 1551
MluCI AATT 4 cut(s) 565, 1812, 1833, 1864
MlyI GAGTC 5 cut(s) 61, 1001, 1113, 1178, 1358
MmeI TCCRAC 5 cut(s) 255, 915, 1001, 1003, 1230
Mph1103I ATGCAT 1 cut(s) 828
MroI TCCGGA 1 cut(s) 411
MroNI GCCGGC 1 cut(s) 45
MseI TTAA 6 cut(s) 63, 690, 1440, 1590, 1653, 1867
MslI CAYNNNNRTG 2 cut(s) 369, 1634
MspA1I CMGCKG 2 cut(s) 629, 1199
MspI CCGG 9 cut(s) 46, 186, 412, 551, 664, 896, 1310, 1324, 1560
MspR9I CCNGG 2 cut(s) 186, 896
MunI CAATTG 1 cut(s) 1812
MvnI CGCG 3 cut(s) 21, 208, 1012
MwoI GCNNNNNNNGC 4 cut(s) 800, 1009, 1515, 1560
NaeI GCCGGC 1 cut(s) 47
NciI CCSGG 2 cut(s) 186, 896
NcoI CCATGG 1 cut(s) 1188
NdeI CATATG 1 cut(s) 1568
NdeII GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
NgoMIV GCCGGC 1 cut(s) 45
NlaIII CATG 7 cut(s) 214, 830, 917, 1051, 1192, 1518, 1639
NlaIV GGNNCC 7 cut(s) 255, 832, 892, 963, 1203, 1262, 1308
NmeAIII GCCGAG 1 cut(s) 1499
NmuCI GTSAC 5 cut(s) 427, 1326, 1345, 1466, 1689
NsbI TGCGCA 2 cut(s) 1046, 1130
NsiI ATGCAT 1 cut(s) 828
NspI RCATGY 2 cut(s) 917, 1639
PauI GCGCGC 1 cut(s) 206
PciI ACATGT 1 cut(s) 1635
PdiI GCCGGC 1 cut(s) 47
PfeI GAWTC 2 cut(s) 218, 259
PflFI GACNNNGTC 1 cut(s) 271
PflMI CCANNNNNTGG 1 cut(s) 137
PfoI TCCNGGA 1 cut(s) 184
PinAI ACCGGT 3 cut(s) 663, 1309, 1323
PkrI GCNGC 4 cut(s) 205, 709, 1165, 1198
PleI GAGTC 5 cut(s) 60, 1001, 1112, 1178, 1358
PpsI GAGTC 5 cut(s) 60, 1001, 1112, 1178, 1358
Ppu21I YACGTR 1 cut(s) 460
PscI ACATGT 1 cut(s) 1635
PshBI ATTAAT 1 cut(s) 1440
Psp124BI GAGCTC 1 cut(s) 723
PspEI GGTNACC 1 cut(s) 1326
PspFI CCCAGC 1 cut(s) 31
PspN4I GGNNCC 7 cut(s) 255, 832, 892, 963, 1203, 1262, 1308
PspOMI GGGCCC 1 cut(s) 253
PspPI GGNCC 8 cut(s) 230, 253, 254, 731, 831, 962, 1202, 1321
PsuI RGATCY 4 cut(s) 15, 890, 975, 1796
PsyI GACNNNGTC 1 cut(s) 271
PteI GCGCGC 1 cut(s) 206
RsaI GTAC 3 cut(s) 468, 1308, 1818
RsaNI GTAC 3 cut(s) 467, 1307, 1817
RseI CAYNNNNRTG 2 cut(s) 369, 1634
SacI GAGCTC 1 cut(s) 723
SaqAI TTAA 6 cut(s) 63, 690, 1440, 1590, 1653, 1867
SatI GCNGC 4 cut(s) 204, 708, 1164, 1197
Sau3AI GATC 9 cut(s) 8, 15, 188, 340, 361, 678, 890, 975, 1796
Sau96I GGNCC 8 cut(s) 230, 253, 254, 731, 831, 962, 1202, 1321
SchI GAGTC 5 cut(s) 61, 1001, 1113, 1178, 1358
ScrFI CCNGG 2 cut(s) 186, 896
SduI GDGCHC 6 cut(s) 121, 257, 625, 723, 1385, 1551
SfaNI GCATC 4 cut(s) 136, 364, 750, 781
SinI GGWCC 4 cut(s) 230, 831, 1202, 1321
SmiMI CAYNNNNRTG 2 cut(s) 369, 1634
SpeI ACTAGT 1 cut(s) 797
Sse9I AATT 4 cut(s) 565, 1812, 1833, 1864
SsiI CCGC 9 cut(s) 19, 49, 629, 659, 888, 959, 1012, 1199, 1331
SspI AATATT 1 cut(s) 1444
SspMI CTAG 4 cut(s) 6, 42, 798, 1578
SstI GAGCTC 1 cut(s) 723
StyD4I CCNGG 2 cut(s) 184, 894
StyI CCWWGG 1 cut(s) 1188
TaaI ACNGT 3 cut(s) 347, 401, 1351
TaiI ACGT 6 cut(s) 183, 229, 462, 468, 573, 1506
TaqII GACCGA 1 cut(s) 1097
TasI AATT 4 cut(s) 565, 1812, 1833, 1864
TatI WGTACW 1 cut(s) 1816
TfiI GAWTC 2 cut(s) 218, 259
Tru1I TTAA 6 cut(s) 63, 690, 1440, 1590, 1653, 1867
Tru9I TTAA 6 cut(s) 63, 690, 1440, 1590, 1653, 1867
TscAI CASTG 3 cut(s) 249, 436, 1354
TseFI GTSAC 5 cut(s) 427, 1326, 1345, 1466, 1689
TseI GCWGC 4 cut(s) 203, 707, 1163, 1196
Tsp45I GTSAC 5 cut(s) 427, 1326, 1345, 1466, 1689
TspDTI ATGAA 3 cut(s) 227, 351, 708
TspGWI ACGGA 1 cut(s) 944
TspRI CASTG 3 cut(s) 249, 436, 1354
Tth111I GACNNNGTC 1 cut(s) 271
Van91I CCANNNNNTGG 1 cut(s) 137
VneI GTGCAC 1 cut(s) 621
VpaK11BI GGWCC 4 cut(s) 230, 831, 1202, 1321
VspI ATTAAT 1 cut(s) 1440
XceI RCATGY 2 cut(s) 917, 1639
XcmI CCANNNNNNNNNTGG 1 cut(s) 1300
XmiI GTMKAC 2 cut(s) 633, 642
XspI CTAG 4 cut(s) 6, 42, 798, 1578
Zsp2I ATGCAT 1 cut(s) 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.