RLG00000029086

No description available

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
32599027 .. 32603015
3989 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029086

Sequence Viewer

Length: 2223 bp
ATGCCGCCGAAGGTCTACACAAAGAAGGCACCCAAAAGGGAGAAACTGAGCAGCTCTAGTAACTCTGATGGAGCTTCGGCGACGGTCTTTGAGGTCTCGAACCAAAATTCTCCAATTTTGGAGTCCGCAAAGAAAGCTTCTGTTAACGGGACCGAAGCGGTGGTTGGGGTACCTAAACTGAAACCTACTTCCGATGAAGCGGTAATTGAGGCACCGAAACCTACTTCCGATGAACCGGTGGTTGAGGTGGAGAAACCTCCTTCCAATGATACGCGGTCACGAAAAGAGAAGGCACCAGAGGATTTAGAGTTGTCTGCCTCACCTGCCGAAGCCAAAGAGGTGAAGGATCGAAAGAAGCTTATCATGAAGAAGAAAGCCTCCGGTCATTCCATGAGCTTTTTGAACTACCTTTTCGAGTTGAGATATATCAAAAATGGAAAGAGCTTCCAGCTGAAGAGAAGGAGCAACCACTTTAGGTCTTTGGTTGCAGATTTTAGCAATGAGAAAAAGGCAGCATGTTCAGCAATTGGATTTGATGTGTTGTTGAAGATGTCAGGAAGGAAAATTCACCACTTTATGTTGCGTGTCCTTGTGGACTCCATAGACCCCAATGCATGTACTATAACTATGCACGGAAAGGAGATTGAAATGGATGTAAGTGACTTTGAAAATGTGATGGGGTTGAAGAATGATGGGTCCGAGGTCGACTTTAAAGGCTCCACTAATGATCACCTTGAGTTGATGGCGATAATAAACTCCTTGTGTGGGAAGGATAAGAAGACCAGTTTAAGGGACGTGCAAAACTACCTGAAGGATACAGAAGAAGTTGACAACAAGTTCAAGCGCATGTTTGTGCTGTTCACAATGAGCACCATCCTTAGCCCATCTGCCTCACTGACGATACCAAAGAAGTGGCTGCTGGCCTTGAAGGACACTCGCCTGATTAGCTCATTAAAGTGGGCTGATTACTCATTCAAATGTTTGATGGAGGCCATCGTCAGTTTCAAAAAAGACTCTCAGTCCTATTGTAGCGGTTGTGTCTTGTTTCTGCAACTGTTCTATTTTGATTGTGTTTCACATGGGAAGACCATTGTGGACAAGTCCTTGTACCCAGTTGAAGCTTGGGGGGACCACGAAACGGGCAAACTGCTCAAATGGGTGAACAAGCAAGGTGGTTTGCTGGATGAAAATGTTCTTATGGCAAAGATTGGCGATCGTGTTGGTAGTGGAGATCAAGCCAAAGCATATGGGAACCTTCAAACTGATGGCTTAGCAGAAAAAGTAAGCCCCAAGAAAGTTTCAAAAAAGAAAGCTGGAGAGCAACAGAAGGTGTTACAGGTACATGGGGAAGACTTGCAACCAAAAAAGAAGACCTCCTTGATTTGCCTATCTAACTCAACATCTGTAGTTAGCCCACTGAAAAGTATGAAGAAAGTTGATGCCAACCCCACGACCAAGAGTAACATAGAGAAGATTGGTAACTTCAAAGTCAAGGGAGATCGGGAGGAGGCTGACAAAGGAGTGCTCAAGTTTGTTTATGATGTATCAACTGAAGAGAAAGAGACCATTGTGGATAGTGAAAATTTCTTCACTAGTCGAAAAGCAGTTTGGTCACTTAAACCTAACGGATGGGTTGAAGATGATATTATCAATTTGTTTAGTGACTATCTACTTCTAGGACGCTTCCCAAGCAATAGATGTTGTTACTTCACAACATACTTTTGTCAAAAGATGAAAAGTTACAATGACAGAGACATGTGTGGAGATTCGGCAAGGGCAGTTTCTATGGGTTTGGGTGTAAAGAGATTTAAGAATGGCATACCTAAGTGCGAAAAGTTGCAAACACTGGACATTTTCTACCACCATGTGGTGTTCAAAGTCAAGAATGTTGTGAAGAAGTTTGGCGGTTCTGACTGTGGGGTGTATGTGATCAAACACATGCAGTGTTATAGATCTGAGTGGTGGCATCAGTTTAACTTAGAAGAGGTATGTATGGACTTCACCATTGAATTGGTAAGGAACAAATTCAATGAGTGCTGGAAATGGATCGAGGAAGCCATCAAAACTCGGCCACCACCAATATGTTCTACACCTAAGATGGCACAAAGGGAAACTAAAGCAGCACCAAAGAAAGGGACCGTGAAGAACCCAATTGTCCAACCACCTCACACTAGAGCTCAATCCAAGAGGGCTGTGGCATCAAATGTCCGTCGTAGCAGGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

741

Amino Acids

83.39

Weight (kDa)

9.3

Isoelectric Point (pI)

39.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1985 PF09331 205 - 330 9e-08 Domain of unknown function (DUF1985)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 331, 2208
Acc36I ACCTGC 2 cut(s) 331, 2208
Acc65I GGTACC 1 cut(s) 169
AccB1I GGYRCC 4 cut(s) 28, 169, 211, 292
AccB7I CCANNNNNTGG 1 cut(s) 1867
AccI GTMKAC 2 cut(s) 15, 705
AccII CGCG 1 cut(s) 274
AciI CCGC 7 cut(s) 5, 126, 158, 200, 274, 1032, 1905
AclWI GGATC 2 cut(s) 354, 2054
AcoI YGGCCR 1 cut(s) 2069
AcsI RAATTY 4 cut(s) 106, 564, 1582, 2024
AcuI CTGAAG 3 cut(s) 473, 830, 1572
AdeI CACNNNGTG 1 cut(s) 1867
AfaI GTAC 4 cut(s) 171, 619, 1109, 1341
AfiI CCNNNNNNNGG 5 cut(s) 765, 789, 1138, 1867, 2132
AflIII ACRYGT 1 cut(s) 1755
AgeI ACCGGT 1 cut(s) 235
AhdI GACNNNNNGTC 1 cut(s) 1018
AhlI ACTAGT 1 cut(s) 1592
AjiI CACGTC 1 cut(s) 796
AjuI GAANNNNNNNTTGG 4 cut(s) 147, 179, 1591, 1623
Alw21I GWGCWC 3 cut(s) 872, 1527, 2179
Alw26I GTCTC 3 cut(s) 100, 1556, 1746
AlwI GGATC 2 cut(s) 354, 2054
AoxI GGCC 3 cut(s) 921, 990, 2069
ApeKI GCWGC 4 cut(s) 51, 512, 916, 2120
ApoI RAATTY 4 cut(s) 106, 564, 1582, 2024
AsiGI ACCGGT 1 cut(s) 235
Asp700I GAANNNNTTC 2 cut(s) 1191, 2024
Asp718I GGTACC 1 cut(s) 169
AspLEI GCGC 1 cut(s) 846
AspS9I GGNCC 4 cut(s) 150, 696, 1129, 2136
AsuHPI GGTGA 6 cut(s) 312, 352, 560, 722, 1171, 1993
AvaII GGWCC 4 cut(s) 150, 696, 1129, 2136
BanI GGYRCC 4 cut(s) 28, 169, 211, 292
BanII GRGCYC 1 cut(s) 2179
BbsI GAAGAC 4 cut(s) 785, 1091, 1356, 1376
Bbv12I GWGCWC 3 cut(s) 872, 1527, 2179
BbvI GCAGC 4 cut(s) 63, 524, 903, 2132
BciVI GTATCC 1 cut(s) 808
BclI TGATCA 2 cut(s) 727, 1929
BcoDI GTCTC 3 cut(s) 100, 1556, 1746
BcuI ACTAGT 1 cut(s) 1592
BfaI CTAG 4 cut(s) 57, 1593, 1676, 2172
BfmI CTRYAG 1 cut(s) 1404
BfuAI ACCTGC 2 cut(s) 331, 2208
BfuI GTATCC 1 cut(s) 808
BglII AGATCT 1 cut(s) 1952
BisI GCNGC 5 cut(s) 5, 52, 513, 917, 2121
BlpI GCTNAGC 1 cut(s) 1270
BlsI GCNGC 5 cut(s) 6, 53, 514, 918, 2122
Bme18I GGWCC 4 cut(s) 150, 696, 1129, 2136
BmeRI GACNNNNNGTC 1 cut(s) 1018
BmgBI CACGTC 1 cut(s) 796
BmgT120I GGNCC 4 cut(s) 150, 696, 1129, 2136
BmrI ACTGGG 1 cut(s) 1106
BmsI GCATC 3 cut(s) 1429, 1975, 2207
BmuI ACTGGG 1 cut(s) 1106
BpiI GAAGAC 4 cut(s) 785, 1091, 1356, 1376
BpmI CTGGAG 1 cut(s) 1335
Bpu10I CCTNAGC 1 cut(s) 878
Bpu1102I GCTNAGC 1 cut(s) 1270
BpuEI CTTGAG 2 cut(s) 755, 1511
BsaI GGTCTC 2 cut(s) 100, 1556
BsaJI CCNNGG 1 cut(s) 699
BsaWI WCCGGW 2 cut(s) 235, 380
Bsc4I CCNNNNNNNGG 5 cut(s) 765, 789, 1138, 1867, 2132
Bse118I RCCGGY 1 cut(s) 235
Bse1I ACTGG 3 cut(s) 783, 1112, 1851
Bse3DI GCAATG 1 cut(s) 505
BseDI CCNNGG 1 cut(s) 699
BseGI GGATG 4 cut(s) 658, 873, 1189, 1634
BseLI CCNNNNNNNGG 5 cut(s) 765, 789, 1138, 1867, 2132
BseMI GCAATG 1 cut(s) 505
BseMII CTCAG 3 cut(s) 38, 1031, 1947
BseNI ACTGG 3 cut(s) 783, 1112, 1851
BseRI GAGGAG 1 cut(s) 1520
BseXI GCAGC 4 cut(s) 63, 524, 903, 2132
Bsh1236I CGCG 1 cut(s) 274
Bsh1285I CGRYCG 1 cut(s) 1216
BshFI GGCC 3 cut(s) 923, 992, 2071
BshNI GGYRCC 4 cut(s) 28, 169, 211, 292
BshTI ACCGGT 1 cut(s) 235
BsiEI CGRYCG 1 cut(s) 1216
BsiHKAI GWGCWC 3 cut(s) 872, 1527, 2179
BsiSI CCGG 2 cut(s) 236, 381
BslFI GGGAC 4 cut(s) 163, 806, 1142, 2149
BslI CCNNNNNNNGG 5 cut(s) 765, 789, 1138, 1867, 2132
BsmAI GTCTC 3 cut(s) 100, 1556, 1746
BsmFI GGGAC 4 cut(s) 163, 806, 1142, 2149
BsnI GGCC 3 cut(s) 923, 992, 2071
Bso31I GGTCTC 2 cut(s) 100, 1556
Bsp1286I GDGCHC 3 cut(s) 872, 1527, 2179
Bsp143I GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
Bsp1720I GCTNAGC 1 cut(s) 1270
BspACI CCGC 7 cut(s) 5, 126, 158, 200, 274, 1032, 1905
BspANI GGCC 3 cut(s) 923, 992, 2071
BspCNI CTCAG 3 cut(s) 39, 1030, 1948
BspFNI CGCG 1 cut(s) 274
BspHI TCATGA 1 cut(s) 363
BspMI ACCTGC 2 cut(s) 331, 2208
BspPI GGATC 2 cut(s) 354, 2054
BspT107I GGYRCC 4 cut(s) 28, 169, 211, 292
BspTNI GGTCTC 2 cut(s) 100, 1556
BsrDI GCAATG 1 cut(s) 505
BsrFI RCCGGY 1 cut(s) 235
BsrI ACTGG 3 cut(s) 783, 1112, 1851
BssAI RCCGGY 1 cut(s) 235
BssECI CCNNGG 1 cut(s) 699
BssMI GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
Bst4CI ACNGT 4 cut(s) 85, 1056, 1916, 2140
Bst6I CTCTTC 3 cut(s) 449, 1548, 1977
BstC8I GCNNGC 1 cut(s) 921
BstDEI CTNAG 8 cut(s) 47, 878, 1017, 1270, 1824, 1956, 1978, 2094
BstF5I GGATG 4 cut(s) 658, 873, 1189, 1634
BstFNI CGCG 1 cut(s) 274
BstHHI GCGC 1 cut(s) 846
BstKTI GATC 8 cut(s) 349, 730, 1216, 1234, 1501, 1932, 1955, 2049
BstMAI GTCTC 3 cut(s) 100, 1556, 1746
BstMBI GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
BstMCI CGRYCG 1 cut(s) 1216
BstMWI GCNNNNNNNGC 5 cut(s) 134, 323, 521, 945, 1689
BstNSI RCATGY 5 cut(s) 519, 618, 850, 1759, 1942
BstSFI CTRYAG 1 cut(s) 1404
BstUI CGCG 1 cut(s) 274
BstV1I GCAGC 4 cut(s) 63, 524, 903, 2132
BstV2I GAAGAC 4 cut(s) 785, 1091, 1356, 1376
BstX2I RGATCY 1 cut(s) 1952
BstXI CCANNNNNNTGG 2 cut(s) 912, 2011
BstYI RGATCY 1 cut(s) 1952
BsuI GTATCC 1 cut(s) 808
BsuRI GGCC 3 cut(s) 923, 992, 2071
BtrI CACGTC 1 cut(s) 796
BtsCI GGATG 4 cut(s) 658, 873, 1189, 1634
BtsI GCAGTG 1 cut(s) 1949
BtsIMutI CAGTG 4 cut(s) 893, 1415, 1844, 1949
BveI ACCTGC 2 cut(s) 331, 2208
Cac8I GCNNGC 1 cut(s) 921
CciI TCATGA 1 cut(s) 363
CfoI GCGC 1 cut(s) 846
Cfr10I RCCGGY 1 cut(s) 235
Cfr13I GGNCC 4 cut(s) 150, 696, 1129, 2136
CseI GACGC 1 cut(s) 1689
Csp6I GTAC 4 cut(s) 170, 618, 1108, 1340
CspAI ACCGGT 1 cut(s) 235
CspCI CAANNNNNGTGG 2 cut(s) 1153, 1188
CviQI GTAC 4 cut(s) 170, 618, 1108, 1340
DdeI CTNAG 8 cut(s) 47, 878, 1017, 1270, 1824, 1956, 1978, 2094
DpnI GATC 8 cut(s) 348, 729, 1215, 1233, 1500, 1931, 1954, 2048
DpnII GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
DraI TTTAAA 1 cut(s) 712
DraIII CACNNNGTG 1 cut(s) 1867
DriI GACNNNNNGTC 1 cut(s) 1018
EaeI YGGCCR 1 cut(s) 2069
Eam1104I CTCTTC 3 cut(s) 449, 1548, 1977
Eam1105I GACNNNNNGTC 1 cut(s) 1018
EarI CTCTTC 3 cut(s) 449, 1548, 1977
Ecl136II GAGCTC 1 cut(s) 2177
Eco24I GRGCYC 1 cut(s) 2179
Eco31I GGTCTC 2 cut(s) 100, 1556
Eco47I GGWCC 4 cut(s) 150, 696, 1129, 2136
Eco53kI GAGCTC 1 cut(s) 2177
Eco57I CTGAAG 3 cut(s) 473, 830, 1572
EcoICRI GAGCTC 1 cut(s) 2177
EcoT22I ATGCAT 1 cut(s) 616
EcoT38I GRGCYC 1 cut(s) 2179
FalI AAGNNNNNCTT 2 cut(s) 1361, 1393
FaqI GGGAC 4 cut(s) 163, 806, 1142, 2149
FauNDI CATATG 1 cut(s) 1246
FbaI TGATCA 2 cut(s) 727, 1929
FblI GTMKAC 2 cut(s) 15, 705
Fnu4HI GCNGC 5 cut(s) 5, 52, 513, 917, 2121
FokI GGATG 4 cut(s) 665, 860, 1196, 1641
FriOI GRGCYC 1 cut(s) 2179
Fsp4HI GCNGC 5 cut(s) 5, 52, 513, 917, 2121
FspBI CTAG 4 cut(s) 57, 1593, 1676, 2172
GlaI GCGC 1 cut(s) 845
GluI GCNGC 5 cut(s) 5, 52, 513, 917, 2121
GsuI CTGGAG 1 cut(s) 1335
HaeIII GGCC 3 cut(s) 923, 992, 2071
HapII CCGG 2 cut(s) 236, 381
HgaI GACGC 1 cut(s) 1689
HhaI GCGC 1 cut(s) 846
Hin6I GCGC 1 cut(s) 844
HinP1I GCGC 1 cut(s) 844
HincII GTYRAC 3 cut(s) 145, 706, 829
HindII GTYRAC 3 cut(s) 145, 706, 829
HindIII AAGCTT 3 cut(s) 135, 356, 1119
HinfI GANTC 4 cut(s) 122, 596, 1013, 1766
HpaI GTTAAC 1 cut(s) 145
HpaII CCGG 2 cut(s) 236, 381
HphI GGTGA 6 cut(s) 312, 352, 560, 722, 1171, 1993
Hpy166II GTNNAC 8 cut(s) 16, 145, 595, 706, 829, 861, 1096, 1162
Hpy188I TCNGA 6 cut(s) 67, 193, 229, 700, 1912, 1957
Hpy188III TCNNGA 6 cut(s) 97, 279, 364, 555, 1502, 1882
Hpy8I GTNNAC 8 cut(s) 16, 145, 595, 706, 829, 861, 1096, 1162
Hpy99I CGWCG 2 cut(s) 85, 2214
HpyCH4III ACNGT 4 cut(s) 85, 1056, 1916, 2140
HpyCH4IV ACGT 1 cut(s) 795
HpyCH4V TGCA 8 cut(s) 488, 614, 631, 799, 1051, 1357, 1840, 1942
HpyF10VI GCNNNNNNNGC 5 cut(s) 134, 323, 521, 945, 1689
HpyF3I CTNAG 8 cut(s) 47, 878, 1017, 1270, 1824, 1956, 1978, 2094
HpySE526I ACGT 1 cut(s) 795
HspAI GCGC 1 cut(s) 844
KpnI GGTACC 1 cut(s) 173
Ksp22I TGATCA 2 cut(s) 727, 1929
KspAI GTTAAC 1 cut(s) 145
Kzo9I GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
LmnI GCTCC 3 cut(s) 71, 462, 722
Lsp1109I GCAGC 4 cut(s) 63, 524, 903, 2132
LweI GCATC 3 cut(s) 1429, 1975, 2207
MaeI CTAG 4 cut(s) 57, 1593, 1676, 2172
MaeII ACGT 1 cut(s) 795
MalI GATC 8 cut(s) 348, 729, 1215, 1233, 1500, 1931, 1954, 2048
MboI GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
MfeI CAATTG 2 cut(s) 525, 2151
MflI RGATCY 1 cut(s) 1952
MhlI GDGCHC 3 cut(s) 872, 1527, 2179
MlyI GAGTC 3 cut(s) 131, 590, 1007
MmeI TCCRAC 1 cut(s) 2182
Mph1103I ATGCAT 1 cut(s) 616
MroXI GAANNNNTTC 2 cut(s) 1191, 2024
MseI TTAA 7 cut(s) 144, 711, 788, 953, 1617, 1809, 1974
MslI CAYNNNNRTG 4 cut(s) 851, 955, 976, 2080
MspA1I CMGCKG 1 cut(s) 451
MspI CCGG 2 cut(s) 236, 381
MunI CAATTG 2 cut(s) 525, 2151
MvnI CGCG 1 cut(s) 274
MwoI GCNNNNNNNGC 5 cut(s) 134, 323, 521, 945, 1689
NdeI CATATG 1 cut(s) 1246
NdeII GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
NmeAIII GCCGAG 1 cut(s) 2047
NmuCI GTSAC 4 cut(s) 276, 659, 1611, 1661
NsiI ATGCAT 1 cut(s) 616
NspI RCATGY 5 cut(s) 519, 618, 850, 1759, 1942
PagI TCATGA 1 cut(s) 363
PaqCI CACCTGC 2 cut(s) 331, 2208
PciI ACATGT 1 cut(s) 1755
PdmI GAANNNNTTC 2 cut(s) 1191, 2024
PfeI GAWTC 1 cut(s) 1766
PflMI CCANNNNNTGG 1 cut(s) 1867
PinAI ACCGGT 1 cut(s) 235
PkrI GCNGC 5 cut(s) 6, 53, 514, 918, 2122
Ple19I CGATCG 1 cut(s) 1216
PleI GAGTC 3 cut(s) 130, 590, 1007
PpsI GAGTC 3 cut(s) 130, 590, 1007
PscI ACATGT 1 cut(s) 1755
Psp124BI GAGCTC 1 cut(s) 2179
PspPI GGNCC 4 cut(s) 150, 696, 1129, 2136
PsuI RGATCY 1 cut(s) 1952
PvuI CGATCG 1 cut(s) 1216
PvuII CAGCTG 1 cut(s) 451
RsaI GTAC 4 cut(s) 171, 619, 1109, 1341
RsaNI GTAC 4 cut(s) 170, 618, 1108, 1340
RseI CAYNNNNRTG 4 cut(s) 851, 955, 976, 2080
SacI GAGCTC 1 cut(s) 2179
SalI GTCGAC 1 cut(s) 704
SaqAI TTAA 7 cut(s) 144, 711, 788, 953, 1617, 1809, 1974
SatI GCNGC 5 cut(s) 5, 52, 513, 917, 2121
Sau3AI GATC 8 cut(s) 346, 727, 1213, 1231, 1498, 1929, 1952, 2046
Sau96I GGNCC 4 cut(s) 150, 696, 1129, 2136
SchI GAGTC 3 cut(s) 131, 590, 1007
SduI GDGCHC 3 cut(s) 872, 1527, 2179
SfaNI GCATC 3 cut(s) 1429, 1975, 2207
SfcI CTRYAG 1 cut(s) 1404
SinI GGWCC 4 cut(s) 150, 696, 1129, 2136
SmiMI CAYNNNNRTG 4 cut(s) 851, 955, 976, 2080
SmlI CTYRAG 2 cut(s) 734, 1526
SmoI CTYRAG 2 cut(s) 734, 1526
SpeI ACTAGT 1 cut(s) 1592
SsiI CCGC 7 cut(s) 5, 126, 158, 200, 274, 1032, 1905
SspMI CTAG 4 cut(s) 57, 1593, 1676, 2172
SstI GAGCTC 1 cut(s) 2179
TaaI ACNGT 4 cut(s) 85, 1056, 1916, 2140
TaiI ACGT 1 cut(s) 798
TaqI TCGA 6 cut(s) 98, 349, 414, 705, 1597, 2049
TaqII GACCGA 1 cut(s) 167
TatI WGTACW 1 cut(s) 617
TauI GCSGC 1 cut(s) 7
TfiI GAWTC 1 cut(s) 1766
Tru1I TTAA 7 cut(s) 144, 711, 788, 953, 1617, 1809, 1974
Tru9I TTAA 7 cut(s) 144, 711, 788, 953, 1617, 1809, 1974
TscAI CASTG 4 cut(s) 900, 1422, 1851, 1949
TseFI GTSAC 4 cut(s) 276, 659, 1611, 1661
TseI GCWGC 4 cut(s) 51, 512, 916, 2120
Tsp45I GTSAC 4 cut(s) 276, 659, 1611, 1661
TspDTI ATGAA 6 cut(s) 210, 246, 380, 1200, 1442, 1748
TspGWI ACGGA 3 cut(s) 648, 1641, 2198
TspRI CASTG 4 cut(s) 900, 1422, 1851, 1949
Van91I CCANNNNNTGG 1 cut(s) 1867
VpaK11BI GGWCC 4 cut(s) 150, 696, 1129, 2136
XapI RAATTY 4 cut(s) 106, 564, 1582, 2024
XceI RCATGY 5 cut(s) 519, 618, 850, 1759, 1942
XcmI CCANNNNNNNNNTGG 2 cut(s) 1119, 2191
XmiI GTMKAC 2 cut(s) 15, 705
XmnI GAANNNNTTC 2 cut(s) 1191, 2024
XspI CTAG 4 cut(s) 57, 1593, 1676, 2172
Zsp2I ATGCAT 1 cut(s) 616
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.