FvH4_4g28760

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000269
Physical Location & Seq
Reverse (-)
29269907 .. 29272790
2884 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g28760.t1

Sequence Viewer

Length: 2067 bp
ATGGCTAGATCGAAGATCCGCGCCCAAAACCCGGCCTTTCCTAGCCGGCGGAGTCAGAGGCTTGATAAATTGGCCTCTTCTACCGAAACGGATGACACCTCCAATCCATCGAAGAGGGCTCGACCATCGCCAACTGATGGTGTAGATGCCTCTGCCTCTGTCTCTAACTCTGTCATCGACGTTCCCAGATCGTCGTCTGAGGCTGCGCGCATGAACGATTCCCAGCGTGGACCTGTATCTTCACTGGAAGAGGGCCTGATTCCCAAGACGGGGTTGGAACGAGGGGGCAACGAGTGTCAACCAATAGAGGAAGGAGACGAAGACGAGGAGGATAATGAAGATCACCCGGTCTACAAGGTAGACACTCGCACATCTCCGCACCGGTTCAAGAGTTTGATCGGAGAGTTCAATGAAGAGAAGTTAGCTGCTTGCAGGGAGCTCGGTTTTGGCCCTCTCTTGAAGTTGGCTATTACTAAGATGCACCTTTCCATTCTGAGGCTCATAGTCGATGCCACTAGCGCCTCAGATAAAAGTATAACTATGCATGGGACCAAGCTTCCACTCTCAGCCAATGATGTGGATAATGTGATGGGTTTGAAGAATGGCGGATCCCCGGTTGTCTTTGAGGGGCATGTGAAAGATTATATGAAGTTGGAGGCCACTGCAAATGAGATGGCGGGGCCTGACCACAAGATCCAACTCGCCAAGGTCGAGGCGTACTTGAAGGAGACGCAATTGGTGGATGACAAATTCAAGCGACTGTTTATTTTGTTCACCATGAGCACCATCATTTCCCCAACCGCTAGCCTTTCTATTCCCAAGAAGTGGCTGCTTTGTGCGAGAAACCCCGCGGACTATGCTTTGAAGAATTGGGCTGAGTATGTTTTCGATTCGCTGATGGCCGGCATTTCTGAATTTCAGCAAAGGGAAAACGGTGCAAAGACAAGTGGGAAATTTTGCAGCGGCTGCCTATTGTTTCTTGAGCTCTTCCATTTTGATTGTGTCGATCATGAGAAACACTTTGTCGATAGGTCTTTGTACCCAATTGAGGCATGGGGGGACAAAGAAGTAGGCAGAGTATTGAAATACATCAATCAGTTAGGGGGTATGCTTGACTCGCGGGTTGGTTGGAAGAAGGTTGGGGGGCATGTGCGCACGGACGATGTTGCACCCGGGGTTAGTAGGCAGGAGTTCGATTTGGCGATGGGTAGAGTCGGTCGATTGGAAGACCAAGTGCGCAACATAGGGGCAGAAATGGGGCAAGGTTTTGCTGCCATCATTAGTAGGCTCGACTCCATGGGTGCAGCAGGTCCATCAAAGGCAAAAGGGATAGGGAAGAAGAAAGAGTGTAATGTGTTGGAACAATGGAACCCCTTGAACAATGTTGAAATCCATAAGGCCACTTTGTTGTTGTGTCCTGGCCAGGTTATGGTTATGGTCATTAAAAGCACTTGGTTATGGTTGGTACCGGTAGATTTGGACCGGTCACCGCCGAAAAAGAAAGTCACGGTCATCCTCTCGGACTCGACGTCGATTGGGAAGAATAGAAGGATTAATATTGGCTCATTTCGTGTCTATGGTGATGGAGATGTGATTGACAAAGGCGTAGTTACAAACGTATGCGACCCATGCTCGGCCAAAGAACTTGTCGAGAAGATTGTGCTCAGCACAACCGGCGACATATGGGCTACTAGAAAACATATTAAGACACTACAACCAAACCAATGGGTTGTGGATGATGTCATCAACATGTTTTCGAACTATCTTAACCAAGAACAAAATGAGAGAGATAAAACTCCGAGGTCACACTTCTTGGATACTTGCTTTGCTCAAAAGATACAAAGTCATTTAGAGGGGGTAAGCAAAGGTCTTCTTACTGGTTTTCCGTCAAAGGAGTTTGGGTATGAGATCCCTCCAGAAAACAATTGTACAATGCGACAAGGTAATTCTTACCACCTATCCTGTTCGTTTATCAAATTAAGTTATTCATTACAAAAGTGTTTGACGTTCTTTAACGGCCCCTTCTTTAACATTCACTCTTACGTAAGAGGTGTAGACCCGTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

689

Amino Acids

76.45

Weight (kDa)

7.22

Isoelectric Point (pI)

40.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1532
Acc16I TGCGCA 2 cut(s) 1154, 1238
Acc36I ACCTGC 1 cut(s) 1298
Acc65I GGTACC 1 cut(s) 1465
AccB1I GGYRCC 1 cut(s) 1465
AccB7I CCANNNNNTGG 3 cut(s) 137, 825, 1429
AccI GTMKAC 3 cut(s) 351, 360, 2055
AccII CGCG 4 cut(s) 21, 208, 851, 1120
AclWI GGATC 5 cut(s) 10, 603, 616, 688, 1903
AcoI YGGCCR 3 cut(s) 900, 1420, 1635
AcsI RAATTY 3 cut(s) 749, 914, 953
AcyI GRCGYC 1 cut(s) 1529
AfaI GTAC 4 cut(s) 719, 1040, 1467, 1930
AfiI CCNNNNNNNGG 9 cut(s) 31, 137, 269, 270, 495, 825, 1048, 1429, 1633
AflIII ACRYGT 1 cut(s) 1749
AgeI ACCGGT 3 cut(s) 381, 1468, 1482
AhdI GACNNNNNGTC 1 cut(s) 1528
AjnI CCWGG 2 cut(s) 1417, 1422
AluBI AGCT 4 cut(s) 425, 439, 556, 985
AluI AGCT 4 cut(s) 425, 439, 556, 985
Alw21I GWGCWC 4 cut(s) 441, 785, 987, 1665
Alw26I GTCTC 3 cut(s) 166, 309, 722
AlwI GGATC 5 cut(s) 10, 603, 616, 688, 1903
AlwNI CAGNNNCTG 1 cut(s) 966
Ama87I CYCGRG 1 cut(s) 1172
ApeKI GCWGC 7 cut(s) 203, 425, 829, 960, 966, 1271, 1304
ApoI RAATTY 3 cut(s) 749, 914, 953
ArsI GACNNNNNNTTYG 2 cut(s) 1632, 1664
AseI ATTAAT 1 cut(s) 1554
AsiGI ACCGGT 3 cut(s) 381, 1468, 1482
Asp718I GGTACC 1 cut(s) 1465
AspLEI GCGC 6 cut(s) 23, 208, 210, 521, 1155, 1239
AspS9I GGNCC 8 cut(s) 230, 253, 449, 549, 680, 1310, 1480, 2018
AsuC2I CCSGG 5 cut(s) 32, 347, 614, 1173, 1174
AsuHPI GGTGA 4 cut(s) 335, 766, 1479, 1592
AsuII TTCGAA 1 cut(s) 1757
AsuNHI GCTAGC 1 cut(s) 803
AvaI CYCGRG 1 cut(s) 1172
AvaII GGWCC 4 cut(s) 230, 549, 1310, 1480
BalI TGGCCA 1 cut(s) 1422
BamHI GGATCC 1 cut(s) 608
BanI GGYRCC 1 cut(s) 1465
BanII GRGCYC 3 cut(s) 121, 441, 987
BbsI GAAGAC 3 cut(s) 327, 1233, 1862
Bbv12I GWGCWC 4 cut(s) 441, 785, 987, 1665
BbvI GCAGC 7 cut(s) 190, 412, 816, 953, 972, 1258, 1316
BceAI ACGGC 1 cut(s) 2032
BcgI CGANNNNNNTGC 2 cut(s) 421, 455
BciT130I CCWGG 2 cut(s) 1419, 1424
BciVI GTATCC 1 cut(s) 1810
BcnI CCSGG 5 cut(s) 32, 347, 614, 1173, 1174
BcoDI GTCTC 3 cut(s) 166, 309, 722
BfaI CTAG 6 cut(s) 6, 42, 516, 804, 1692, 2065
BfoI RGCGCY 1 cut(s) 522
BfuAI ACCTGC 1 cut(s) 1298
BfuI GTATCC 1 cut(s) 1810
BisI GCNGC 8 cut(s) 204, 426, 830, 961, 964, 967, 1272, 1305
BlpI GCTNAGC 1 cut(s) 1664
BlsI GCNGC 8 cut(s) 205, 427, 831, 962, 965, 968, 1273, 1306
Bme1390I CCNGG 7 cut(s) 32, 347, 614, 1173, 1174, 1419, 1424
Bme18I GGWCC 4 cut(s) 230, 549, 1310, 1480
BmeRI GACNNNNNGTC 1 cut(s) 1528
BmeT110I CYCGRG 1 cut(s) 1172
BmgT120I GGNCC 8 cut(s) 230, 253, 449, 549, 680, 1310, 1480, 2018
BmiI GGNNCC 6 cut(s) 550, 610, 681, 1370, 1467, 2020
BmrFI CCNGG 7 cut(s) 32, 347, 614, 1173, 1174, 1419, 1424
BmsI GCATC 3 cut(s) 136, 468, 499
BmtI GCTAGC 1 cut(s) 807
BpiI GAAGAC 3 cut(s) 327, 1233, 1862
BpmI CTGGAG 1 cut(s) 1899
Bpu1102I GCTNAGC 1 cut(s) 1664
Bpu14I TTCGAA 1 cut(s) 1757
BpuEI CTTGAG 1 cut(s) 1001
BpuMI CCSGG 5 cut(s) 32, 347, 614, 1173, 1174
BsaAI YACGTR 1 cut(s) 2044
BsaHI GRCGYC 1 cut(s) 1529
BsaJI CCNNGG 7 cut(s) 612, 705, 849, 1172, 1173, 1296, 1799
BsaWI WCCGGW 3 cut(s) 381, 1468, 1482
BsaXI ACNNNNNCTCC 2 cut(s) 1886, 1916
Bsc4I CCNNNNNNNGG 9 cut(s) 31, 137, 269, 270, 495, 825, 1048, 1429, 1633
Bse118I RCCGGY 6 cut(s) 45, 381, 902, 1468, 1482, 1673
Bse1I ACTGG 2 cut(s) 249, 1882
BseBI CCWGG 2 cut(s) 1419, 1424
BseDI CCNNGG 7 cut(s) 612, 705, 849, 1172, 1173, 1296, 1799
BseGI GGATG 4 cut(s) 97, 748, 1512, 1741
BseLI CCNNNNNNNGG 9 cut(s) 31, 137, 269, 270, 495, 825, 1048, 1429, 1633
BseMII CTCAG 6 cut(s) 189, 485, 537, 579, 867, 1678
BseNI ACTGG 2 cut(s) 249, 1882
BsePI GCGCGC 1 cut(s) 206
BseRI GAGGAG 1 cut(s) 341
BseXI GCAGC 7 cut(s) 190, 412, 816, 953, 972, 1258, 1316
BseYI CCCAGC 1 cut(s) 222
BsgI GTGCAG 1 cut(s) 1323
Bsh1236I CGCG 4 cut(s) 21, 208, 851, 1120
Bsh1285I CGRYCG 1 cut(s) 1219
BshNI GGYRCC 1 cut(s) 1465
BshTI ACCGGT 3 cut(s) 381, 1468, 1482
BsiEI CGRYCG 1 cut(s) 1219
BsiHKAI GWGCWC 4 cut(s) 441, 785, 987, 1665
BsiHKCI CYCGRG 1 cut(s) 1172
BslFI GGGAC 2 cut(s) 562, 1073
BslI CCNNNNNNNGG 9 cut(s) 31, 137, 269, 270, 495, 825, 1048, 1429, 1633
BsmAI GTCTC 3 cut(s) 166, 309, 722
BsmBI CGTCTC 2 cut(s) 309, 722
BsmFI GGGAC 2 cut(s) 562, 1073
BsoBI CYCGRG 1 cut(s) 1172
Bsp119I TTCGAA 1 cut(s) 1757
Bsp1286I GDGCHC 5 cut(s) 121, 441, 785, 987, 1665
Bsp1407I TGTACA 1 cut(s) 1928
Bsp143I GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
Bsp1720I GCTNAGC 1 cut(s) 1664
Bsp19I CCATGG 1 cut(s) 1296
BspCNI CTCAG 6 cut(s) 190, 486, 536, 578, 868, 1677
BspFNI CGCG 4 cut(s) 21, 208, 851, 1120
BspHI TCATGA 1 cut(s) 1009
BspLI GGNNCC 6 cut(s) 550, 610, 681, 1370, 1467, 2020
BspMI ACCTGC 1 cut(s) 1298
BspOI GCTAGC 1 cut(s) 807
BspPI GGATC 5 cut(s) 10, 603, 616, 688, 1903
BspQI GCTCTTC 1 cut(s) 992
BspT104I TTCGAA 1 cut(s) 1757
BspT107I GGYRCC 1 cut(s) 1465
BsrFI RCCGGY 6 cut(s) 45, 381, 902, 1468, 1482, 1673
BsrGI TGTACA 1 cut(s) 1928
BsrI ACTGG 2 cut(s) 249, 1882
BssAI RCCGGY 6 cut(s) 45, 381, 902, 1468, 1482, 1673
BssECI CCNNGG 7 cut(s) 612, 705, 849, 1172, 1173, 1296, 1799
BssHII GCGCGC 1 cut(s) 206
BssMI GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
BssNI GRCGYC 1 cut(s) 1529
BssT1I CCWWGG 2 cut(s) 705, 1296
Bst2UI CCWGG 2 cut(s) 1419, 1424
Bst4CI ACNGT 3 cut(s) 762, 935, 1510
Bst6I CTCTTC 5 cut(s) 82, 107, 243, 408, 992
BstACI GRCGYC 1 cut(s) 1529
BstAPI GCANNNNNTGC 1 cut(s) 966
BstAUI TGTACA 1 cut(s) 1928
BstBAI YACGTR 1 cut(s) 2044
BstBI TTCGAA 1 cut(s) 1757
BstC8I GCNNGC 5 cut(s) 47, 208, 430, 805, 904
BstDEI CTNAG 7 cut(s) 198, 474, 494, 523, 565, 876, 1664
BstDSI CCRYGG 2 cut(s) 849, 1296
BstEII GGTNACC 1 cut(s) 1485
BstF5I GGATG 4 cut(s) 97, 748, 1512, 1741
BstFNI CGCG 4 cut(s) 21, 208, 851, 1120
BstH2I RGCGCY 1 cut(s) 522
BstHHI GCGC 6 cut(s) 23, 208, 210, 521, 1155, 1239
BstKTI GATC 9 cut(s) 11, 18, 191, 343, 399, 611, 696, 1009, 1911
BstMAI GTCTC 3 cut(s) 166, 309, 722
BstMBI GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
BstMCI CGRYCG 1 cut(s) 1219
BstMWI GCNNNNNNNGC 6 cut(s) 518, 857, 966, 1117, 1629, 1674
BstNI CCWGG 2 cut(s) 1419, 1424
BstNSI RCATGY 3 cut(s) 635, 1151, 1753
BstPI GGTNACC 1 cut(s) 1485
BstSCI CCNGG 7 cut(s) 30, 345, 612, 1171, 1172, 1417, 1422
BstSNI TACGTA 1 cut(s) 2044
BstUI CGCG 4 cut(s) 21, 208, 851, 1120
BstV1I GCAGC 7 cut(s) 190, 412, 816, 953, 972, 1258, 1316
BstV2I GAAGAC 3 cut(s) 327, 1233, 1862
BstX2I RGATCY 4 cut(s) 15, 608, 693, 1908
BstXI CCANNNNNNTGG 2 cut(s) 577, 1725
BstYI RGATCY 4 cut(s) 15, 608, 693, 1908
BsuI GTATCC 1 cut(s) 1810
BtgI CCRYGG 2 cut(s) 849, 1296
BtgZI GCGATG 2 cut(s) 111, 1217
BtsCI GGATG 4 cut(s) 97, 748, 1512, 1741
BtsI GCAGTG 1 cut(s) 660
BtsIMutI CAGTG 2 cut(s) 242, 660
BveI ACCTGC 1 cut(s) 1298
Cac8I GCNNGC 5 cut(s) 47, 208, 430, 805, 904
CaiI CAGNNNCTG 1 cut(s) 966
CciI TCATGA 1 cut(s) 1009
CfoI GCGC 6 cut(s) 23, 208, 210, 521, 1155, 1239
Cfr10I RCCGGY 6 cut(s) 45, 381, 902, 1468, 1482, 1673
Cfr13I GGNCC 8 cut(s) 230, 253, 449, 549, 680, 1310, 1480, 2018
Cfr42I CCGCGG 1 cut(s) 852
Cfr9I CCCGGG 1 cut(s) 1172
CseI GACGC 1 cut(s) 739
Csp6I GTAC 4 cut(s) 718, 1039, 1466, 1929
CspAI ACCGGT 3 cut(s) 381, 1468, 1482
CviQI GTAC 4 cut(s) 718, 1039, 1466, 1929
DdeI CTNAG 7 cut(s) 198, 474, 494, 523, 565, 876, 1664
DpnI GATC 9 cut(s) 10, 17, 190, 342, 398, 610, 695, 1008, 1910
DpnII GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
DriI GACNNNNNGTC 1 cut(s) 1528
EaeI YGGCCR 3 cut(s) 900, 1420, 1635
Eam1104I CTCTTC 5 cut(s) 82, 107, 243, 408, 992
Eam1105I GACNNNNNGTC 1 cut(s) 1528
EarI CTCTTC 5 cut(s) 82, 107, 243, 408, 992
EciI GGCGGA 2 cut(s) 64, 621
Ecl136II GAGCTC 2 cut(s) 439, 985
Eco105I TACGTA 1 cut(s) 2044
Eco130I CCWWGG 2 cut(s) 705, 1296
Eco24I GRGCYC 3 cut(s) 121, 441, 987
Eco47I GGWCC 4 cut(s) 230, 549, 1310, 1480
Eco53kI GAGCTC 2 cut(s) 439, 985
Eco88I CYCGRG 1 cut(s) 1172
Eco91I GGTNACC 1 cut(s) 1485
EcoICRI GAGCTC 2 cut(s) 439, 985
EcoO109I RGGNCCY 2 cut(s) 253, 680
EcoO65I GGTNACC 1 cut(s) 1485
EcoRII CCWGG 2 cut(s) 1417, 1422
EcoT14I CCWWGG 2 cut(s) 705, 1296
EcoT22I ATGCAT 1 cut(s) 546
EcoT38I GRGCYC 3 cut(s) 121, 441, 987
ErhI CCWWGG 2 cut(s) 705, 1296
Esp3I CGTCTC 2 cut(s) 309, 722
FalI AAGNNNNNCTT 2 cut(s) 1857, 1889
FaqI GGGAC 2 cut(s) 562, 1073
FauI CCCGC 3 cut(s) 670, 856, 1113
FauNDI CATATG 1 cut(s) 1682
FblI GTMKAC 3 cut(s) 351, 360, 2055
Fnu4HI GCNGC 8 cut(s) 204, 426, 830, 961, 964, 967, 1272, 1305
FokI GGATG 4 cut(s) 104, 755, 1499, 1748
FriOI GRGCYC 3 cut(s) 121, 441, 987
Fsp4HI GCNGC 8 cut(s) 204, 426, 830, 961, 964, 967, 1272, 1305
FspAI RTGCGCAY 1 cut(s) 1154
FspBI CTAG 6 cut(s) 6, 42, 516, 804, 1692, 2065
FspI TGCGCA 2 cut(s) 1154, 1238
GlaI GCGC 6 cut(s) 22, 207, 209, 520, 1154, 1238
GluI GCNGC 8 cut(s) 204, 426, 830, 961, 964, 967, 1272, 1305
GsaI CCCAGC 1 cut(s) 226
GsuI CTGGAG 1 cut(s) 1899
HaeII RGCGCY 1 cut(s) 522
HgaI GACGC 1 cut(s) 739
HhaI GCGC 6 cut(s) 23, 208, 210, 521, 1155, 1239
Hin1I GRCGYC 1 cut(s) 1529
Hin6I GCGC 6 cut(s) 21, 206, 208, 519, 1153, 1237
HinP1I GCGC 6 cut(s) 21, 206, 208, 519, 1153, 1237
HincII GTYRAC 1 cut(s) 299
HindII GTYRAC 1 cut(s) 299
HindIII AAGCTT 1 cut(s) 554
HinfI GANTC 8 cut(s) 52, 218, 259, 890, 1115, 1212, 1292, 1523
HphI GGTGA 4 cut(s) 335, 766, 1479, 1592
Hpy166II GTNNAC 6 cut(s) 230, 299, 352, 361, 774, 2056
Hpy188I TCNGA 8 cut(s) 57, 199, 401, 495, 526, 913, 1522, 1800
Hpy188III TCNNGA 6 cut(s) 388, 457, 980, 1010, 1651, 1916
Hpy8I GTNNAC 6 cut(s) 230, 299, 352, 361, 774, 2056
Hpy99I CGWCG 4 cut(s) 182, 196, 1531, 1534
HpyAV CCTTC 5 cut(s) 305, 718, 1129, 1542, 2032
HpyCH4III ACNGT 3 cut(s) 762, 935, 1510
HpyCH4IV ACGT 5 cut(s) 180, 1529, 1617, 2006, 2043
HpyCH4V TGCA 8 cut(s) 432, 481, 544, 665, 938, 960, 1169, 1304
HpyF10VI GCNNNNNNNGC 6 cut(s) 518, 857, 966, 1117, 1629, 1674
HpyF3I CTNAG 7 cut(s) 198, 474, 494, 523, 565, 876, 1664
HpySE526I ACGT 5 cut(s) 180, 1529, 1617, 2006, 2043
Hsp92I GRCGYC 1 cut(s) 1529
HspAI GCGC 6 cut(s) 21, 206, 208, 519, 1153, 1237
KpnI GGTACC 1 cut(s) 1469
KroI GCCGGC 2 cut(s) 45, 902
KroNI GCCGGC 2 cut(s) 47, 904
KspI CCGCGG 1 cut(s) 852
Kzo9I GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
LguI GCTCTTC 1 cut(s) 992
LmnI GCTCC 1 cut(s) 436
Lsp1109I GCAGC 7 cut(s) 190, 412, 816, 953, 972, 1258, 1316
LweI GCATC 3 cut(s) 136, 468, 499
MaeI CTAG 6 cut(s) 6, 42, 516, 804, 1692, 2065
MaeII ACGT 5 cut(s) 180, 1529, 1617, 2006, 2043
MaeIII GTNAC 4 cut(s) 1485, 1504, 1609, 1803
MalI GATC 9 cut(s) 10, 17, 190, 342, 398, 610, 695, 1008, 1910
MboI GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
MfeI CAATTG 3 cut(s) 734, 1044, 1924
MflI RGATCY 4 cut(s) 15, 608, 693, 1908
MhlI GDGCHC 5 cut(s) 121, 441, 785, 987, 1665
MlsI TGGCCA 1 cut(s) 1422
MluNI TGGCCA 1 cut(s) 1422
MlyI GAGTC 5 cut(s) 61, 1109, 1221, 1286, 1517
MmeI TCCRAC 5 cut(s) 255, 633, 721, 1109, 1338
Mox20I TGGCCA 1 cut(s) 1422
Mph1103I ATGCAT 1 cut(s) 546
MroNI GCCGGC 2 cut(s) 45, 902
MscI TGGCCA 1 cut(s) 1422
MseI TTAA 7 cut(s) 1443, 1554, 1704, 1767, 1979, 2013, 2028
MslI CAYNNNNRTG 1 cut(s) 1748
Msp20I TGGCCA 1 cut(s) 1422
MspA1I CMGCKG 2 cut(s) 851, 963
MspR9I CCNGG 7 cut(s) 32, 347, 614, 1173, 1174, 1419, 1424
MunI CAATTG 3 cut(s) 734, 1044, 1924
MvaI CCWGG 2 cut(s) 1419, 1424
MvnI CGCG 4 cut(s) 21, 208, 851, 1120
MwoI GCNNNNNNNGC 6 cut(s) 518, 857, 966, 1117, 1629, 1674
NaeI GCCGGC 2 cut(s) 47, 904
NciI CCSGG 5 cut(s) 32, 347, 614, 1173, 1174
NcoI CCATGG 1 cut(s) 1296
NdeI CATATG 1 cut(s) 1682
NdeII GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
NgoMIV GCCGGC 2 cut(s) 45, 902
NheI GCTAGC 1 cut(s) 803
NlaIV GGNNCC 6 cut(s) 550, 610, 681, 1370, 1467, 2020
NmeAIII GCCGAG 1 cut(s) 1613
NmuCI GTSAC 3 cut(s) 1485, 1504, 1803
NsbI TGCGCA 2 cut(s) 1154, 1238
NsiI ATGCAT 1 cut(s) 546
NspI RCATGY 3 cut(s) 635, 1151, 1753
NspV TTCGAA 1 cut(s) 1757
PagI TCATGA 1 cut(s) 1009
PauI GCGCGC 1 cut(s) 206
PciI ACATGT 1 cut(s) 1749
PciSI GCTCTTC 1 cut(s) 992
PcsI WCGNNNNNNNCGW 2 cut(s) 708, 1526
PdiI GCCGGC 2 cut(s) 47, 904
PfeI GAWTC 3 cut(s) 218, 259, 890
PflMI CCANNNNNTGG 3 cut(s) 137, 825, 1429
PinAI ACCGGT 3 cut(s) 381, 1468, 1482
PkrI GCNGC 8 cut(s) 205, 427, 831, 962, 965, 968, 1273, 1306
PleI GAGTC 5 cut(s) 60, 1109, 1220, 1286, 1517
PpsI GAGTC 5 cut(s) 60, 1109, 1220, 1286, 1517
Ppu21I YACGTR 1 cut(s) 2044
PscI ACATGT 1 cut(s) 1749
PshBI ATTAAT 1 cut(s) 1554
Psp124BI GAGCTC 2 cut(s) 441, 987
Psp6I CCWGG 2 cut(s) 1417, 1422
PspEI GGTNACC 1 cut(s) 1485
PspFI CCCAGC 1 cut(s) 222
PspGI CCWGG 2 cut(s) 1417, 1422
PspN4I GGNNCC 6 cut(s) 550, 610, 681, 1370, 1467, 2020
PspPI GGNCC 8 cut(s) 230, 253, 449, 549, 680, 1310, 1480, 2018
PstNI CAGNNNCTG 1 cut(s) 966
PsuI RGATCY 4 cut(s) 15, 608, 693, 1908
PteI GCGCGC 1 cut(s) 206
RsaI GTAC 4 cut(s) 719, 1040, 1467, 1930
RsaNI GTAC 4 cut(s) 718, 1039, 1466, 1929
RseI CAYNNNNRTG 1 cut(s) 1748
SacI GAGCTC 2 cut(s) 441, 987
SacII CCGCGG 1 cut(s) 852
SapI GCTCTTC 1 cut(s) 992
SaqAI TTAA 7 cut(s) 1443, 1554, 1704, 1767, 1979, 2013, 2028
SatI GCNGC 8 cut(s) 204, 426, 830, 961, 964, 967, 1272, 1305
Sau3AI GATC 9 cut(s) 8, 15, 188, 340, 396, 608, 693, 1006, 1908
Sau96I GGNCC 8 cut(s) 230, 253, 449, 549, 680, 1310, 1480, 2018
SchI GAGTC 5 cut(s) 61, 1109, 1221, 1286, 1517
ScrFI CCNGG 7 cut(s) 32, 347, 614, 1173, 1174, 1419, 1424
SduI GDGCHC 5 cut(s) 121, 441, 785, 987, 1665
SfaNI GCATC 3 cut(s) 136, 468, 499
Sfr303I CCGCGG 1 cut(s) 852
SfuI TTCGAA 1 cut(s) 1757
SgrBI CCGCGG 1 cut(s) 852
SinI GGWCC 4 cut(s) 230, 549, 1310, 1480
SmaI CCCGGG 1 cut(s) 1174
SmiMI CAYNNNNRTG 1 cut(s) 1748
SmlI CTYRAG 1 cut(s) 980
SmoI CTYRAG 1 cut(s) 980
SnaBI TACGTA 1 cut(s) 2044
SspI AATATT 1 cut(s) 1558
SspMI CTAG 6 cut(s) 6, 42, 516, 804, 1692, 2065
SstI GAGCTC 2 cut(s) 441, 987
StyD4I CCNGG 7 cut(s) 30, 345, 612, 1171, 1172, 1417, 1422
StyI CCWWGG 2 cut(s) 705, 1296
TaaI ACNGT 3 cut(s) 762, 935, 1510
TaiI ACGT 5 cut(s) 183, 1532, 1620, 2009, 2046
TaqII GACCGA 1 cut(s) 1205
TatI WGTACW 1 cut(s) 1928
TauI GCSGC 1 cut(s) 966
TfiI GAWTC 3 cut(s) 218, 259, 890
Tru1I TTAA 7 cut(s) 1443, 1554, 1704, 1767, 1979, 2013, 2028
Tru9I TTAA 7 cut(s) 1443, 1554, 1704, 1767, 1979, 2013, 2028
TscAI CASTG 2 cut(s) 249, 667
TseFI GTSAC 3 cut(s) 1485, 1504, 1803
TseI GCWGC 7 cut(s) 203, 425, 829, 960, 966, 1271, 1304
Tsp45I GTSAC 3 cut(s) 1485, 1504, 1803
TspDTI ATGAA 5 cut(s) 227, 351, 426, 662, 1977
TspGWI ACGGA 3 cut(s) 104, 1172, 1875
TspMI CCCGGG 1 cut(s) 1172
TspRI CASTG 2 cut(s) 249, 667
Van91I CCANNNNNTGG 3 cut(s) 137, 825, 1429
VpaK11BI GGWCC 4 cut(s) 230, 549, 1310, 1480
VspI ATTAAT 1 cut(s) 1554
XapI RAATTY 3 cut(s) 749, 914, 953
XceI RCATGY 3 cut(s) 635, 1151, 1753
XcmI CCANNNNNNNNNTGG 2 cut(s) 271, 1050
XmaI CCCGGG 1 cut(s) 1172
XmiI GTMKAC 3 cut(s) 351, 360, 2055
XspI CTAG 6 cut(s) 6, 42, 516, 804, 1692, 2065
ZraI GACGTC 1 cut(s) 1530
Zsp2I ATGCAT 1 cut(s) 546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.