FvH4_5g37871

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000269
Physical Location & Seq
Forward (+)
27907920 .. 27909199
1280 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g37871.t1

Sequence Viewer

Length: 1155 bp
ATGGCTAGATCGAAGATCCTCGCCCGAAACCCGGCCTTTCCTAGCCGGCGGAGTCAGAGGTTTGATAAATCGGCCTCTTCTACCCAAACGGATGACACCTCCAATCCATCGAAGAGGGCTCGACCATCGCCAACTGATGGTGTAGATGCCTTTGCCTCTGTCTCTAACTCTGTCATCGACGTTCCCGGATCGTCGTTTGAGGCTGCGCGCATGAACGATTCCCAGCGTGGACCTGTATCTTCATTGGAAGAGGGCCCGATTCCCAAGACGGGGTCGGAACGAGGGGGCGACGTGTGTCAACCAATAGAGGAAGGAGACGAAGACGAGGAGGATAATGAAGATCACCGTGAAGAGGGAGAAGATCATTTTGATGATGCGAAAGGGCAAGTGGCTGGCGACCGTGTGGTCTTCCGGAAGAGGAGTAAAGTCACCGGGAAACAATTGAGTTTCTTCAACTACGTGAACGTACACCTAAAGTCAGGGAATGTGCCGAAGAACCAAGTTCATGACTTCAAGTTGAGCCTATCTCAGAAATGGAAGGAACTTCTACCGGAAGAGAAGGCAAATTACGTCCACCCTGATAAAGAGGGTTACTCGTCAGCTTCTTATTCCGAGGGAAGTGCGCCAGCGGTCTACAAGGTAGACACTCGCACATCTCCCCACCGGTTCAAGAGTTTGATCGGAGAGTTCAATGAAGAGAAGTTAGCTGCTTGCAGGGAGCTCGGTTTTGGCCCTCTCTTGAAGTTGGCTATTACTAAGATGCACCTTTCCATTCTGAGGCTCATAGTCGATGCCACTAGCGCCTTAGATAAAAGTATAACTATGCATGGGACCAAGCTTCCACTCTCAGCCAATGATGTGGAGAATGTGATGGGTTTGAAGAATGGCGGATCCCCGGTTGTCTTTGAGGGGCATGTGAAAGATTATACGGAGTTGGAGGCCACTGCAAATGAGATGGCGGGGCCTGACCACAAGATCCAACTCGCCAAGGTCGAGGCGTACTTGAAGGAGACGCAATTGGTGGATGACAAATTCAAGCGACTGTTTATTTTGTTCACCATGAGCACCATCATTTCCCCAACCGCTAGCCTTTCTATTCCTAAGAAGTGGCTGCTTTGTGCGAGAAACCCCGCGGACTGTGCTTCGAAGAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

385

Amino Acids

42.29

Weight (kDa)

6.24

Isoelectric Point (pI)

42.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 404
AccB7I CCANNNNNTGG 1 cut(s) 137
AccI GTMKAC 2 cut(s) 633, 642
AccII CGCG 2 cut(s) 208, 1133
AccIII TCCGGA 1 cut(s) 411
AciI CCGC 7 cut(s) 49, 629, 888, 959, 1083, 1131, 1133
AclWI GGATC 5 cut(s) 10, 196, 885, 898, 970
AcsI RAATTY 1 cut(s) 1031
AfaI GTAC 2 cut(s) 468, 1001
AfiI CCNNNNNNNGG 6 cut(s) 31, 137, 269, 270, 352, 777
AflIII ACRYGT 1 cut(s) 291
AgeI ACCGGT 1 cut(s) 663
AgsI TTSAA 8 cut(s) 454, 514, 670, 691, 742, 880, 1006, 1036
AjiI CACGTC 1 cut(s) 292
AluBI AGCT 4 cut(s) 602, 707, 721, 838
AluI AGCT 4 cut(s) 602, 707, 721, 838
Alw21I GWGCWC 2 cut(s) 723, 1067
Alw26I GTCTC 3 cut(s) 166, 309, 1004
AlwI GGATC 5 cut(s) 10, 196, 885, 898, 970
Aor13HI TCCGGA 1 cut(s) 411
AoxI GGCC 6 cut(s) 33, 72, 253, 730, 939, 962
ApaI GGGCCC 1 cut(s) 257
ApeKI GCWGC 3 cut(s) 203, 707, 1111
ApoI RAATTY 1 cut(s) 1031
AsiGI ACCGGT 1 cut(s) 663
AspLEI GCGC 4 cut(s) 208, 210, 625, 803
AspS9I GGNCC 6 cut(s) 230, 253, 254, 731, 831, 962
AsuC2I CCSGG 4 cut(s) 32, 186, 433, 896
AsuHPI GGTGA 3 cut(s) 335, 421, 1048
AsuII TTCGAA 1 cut(s) 1145
AsuNHI GCTAGC 1 cut(s) 1085
AvaII GGWCC 2 cut(s) 230, 831
BaeGI GKGCMC 1 cut(s) 257
BamHI GGATCC 1 cut(s) 890
BanII GRGCYC 3 cut(s) 121, 257, 723
BarI GAAGNNNNNNTAC 2 cut(s) 551, 583
BbsI GAAGAC 2 cut(s) 327, 400
Bbv12I GWGCWC 2 cut(s) 723, 1067
BbvI GCAGC 3 cut(s) 190, 694, 1098
BccI CCATC 6 cut(s) 115, 131, 133, 865, 949, 1076
BcgI CGANNNNNNTGC 4 cut(s) 602, 636, 703, 737
BcnI CCSGG 4 cut(s) 32, 186, 433, 896
BcoDI GTCTC 3 cut(s) 166, 309, 1004
BfaI CTAG 4 cut(s) 6, 42, 798, 1086
BfoI RGCGCY 1 cut(s) 804
BisI GCNGC 3 cut(s) 204, 708, 1112
BlsI GCNGC 3 cut(s) 205, 709, 1113
Bme1390I CCNGG 4 cut(s) 32, 186, 433, 896
Bme18I GGWCC 2 cut(s) 230, 831
BmgBI CACGTC 1 cut(s) 292
BmgT120I GGNCC 6 cut(s) 230, 253, 254, 731, 831, 962
BmiI GGNNCC 4 cut(s) 255, 832, 892, 963
BmrFI CCNGG 4 cut(s) 32, 186, 433, 896
BmsI GCATC 4 cut(s) 136, 364, 750, 781
BmtI GCTAGC 1 cut(s) 1089
BoxI GACNNNNGTC 1 cut(s) 294
BpiI GAAGAC 2 cut(s) 327, 400
BplI GAGNNNNNCTC 4 cut(s) 511, 543, 578, 610
Bpu14I TTCGAA 1 cut(s) 1145
BpuMI CCSGG 4 cut(s) 32, 186, 433, 896
BsaAI YACGTR 1 cut(s) 460
BsaJI CCNNGG 4 cut(s) 612, 894, 987, 1131
BsaWI WCCGGW 3 cut(s) 411, 550, 663
Bsc4I CCNNNNNNNGG 6 cut(s) 31, 137, 269, 270, 352, 777
Bse118I RCCGGY 2 cut(s) 45, 663
BseAI TCCGGA 1 cut(s) 411
BseDI CCNNGG 4 cut(s) 612, 894, 987, 1131
BseGI GGATG 2 cut(s) 97, 1030
BseLI CCNNNNNNNGG 6 cut(s) 31, 137, 269, 270, 352, 777
BseMII CTCAG 3 cut(s) 542, 767, 861
BsePI GCGCGC 1 cut(s) 206
BseRI GAGGAG 2 cut(s) 341, 433
BseSI GKGCMC 1 cut(s) 257
BseXI GCAGC 3 cut(s) 190, 694, 1098
BseYI CCCAGC 1 cut(s) 222
Bsh1236I CGCG 2 cut(s) 208, 1133
Bsh1285I CGRYCG 1 cut(s) 400
BshFI GGCC 6 cut(s) 35, 74, 255, 732, 941, 964
BshTI ACCGGT 1 cut(s) 663
BsiEI CGRYCG 1 cut(s) 400
BsiHKAI GWGCWC 2 cut(s) 723, 1067
BsiSI CCGG 8 cut(s) 32, 46, 186, 412, 432, 551, 664, 896
BslFI GGGAC 1 cut(s) 844
BslI CCNNNNNNNGG 6 cut(s) 31, 137, 269, 270, 352, 777
BsmAI GTCTC 3 cut(s) 166, 309, 1004
BsmBI CGTCTC 2 cut(s) 309, 1004
BsmFI GGGAC 1 cut(s) 844
BsnI GGCC 6 cut(s) 35, 74, 255, 732, 941, 964
Bsp119I TTCGAA 1 cut(s) 1145
Bsp120I GGGCCC 1 cut(s) 253
Bsp1286I GDGCHC 4 cut(s) 121, 257, 723, 1067
Bsp13I TCCGGA 1 cut(s) 411
Bsp143I GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
BspACI CCGC 7 cut(s) 49, 629, 888, 959, 1083, 1131, 1133
BspANI GGCC 6 cut(s) 35, 74, 255, 732, 941, 964
BspCNI CTCAG 3 cut(s) 541, 768, 860
BspEI TCCGGA 1 cut(s) 411
BspFNI CGCG 2 cut(s) 208, 1133
BspHI TCATGA 1 cut(s) 505
BspLI GGNNCC 4 cut(s) 255, 832, 892, 963
BspOI GCTAGC 1 cut(s) 1089
BspPI GGATC 5 cut(s) 10, 196, 885, 898, 970
BspT104I TTCGAA 1 cut(s) 1145
BsrFI RCCGGY 2 cut(s) 45, 663
BssAI RCCGGY 2 cut(s) 45, 663
BssECI CCNNGG 4 cut(s) 612, 894, 987, 1131
BssHII GCGCGC 1 cut(s) 206
BssMI GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
BssT1I CCWWGG 1 cut(s) 987
Bst4CI ACNGT 4 cut(s) 347, 401, 1044, 1139
Bst6I CTCTTC 7 cut(s) 82, 107, 243, 345, 410, 549, 690
BstBAI YACGTR 1 cut(s) 460
BstBI TTCGAA 1 cut(s) 1145
BstC8I GCNNGC 6 cut(s) 47, 208, 394, 627, 712, 1087
BstDEI CTNAG 6 cut(s) 528, 756, 776, 805, 847, 1101
BstDSI CCRYGG 1 cut(s) 1131
BstF5I GGATG 2 cut(s) 97, 1030
BstFNI CGCG 2 cut(s) 208, 1133
BstH2I RGCGCY 1 cut(s) 804
BstHHI GCGC 4 cut(s) 208, 210, 625, 803
BstKTI GATC 8 cut(s) 11, 18, 191, 343, 364, 681, 893, 978
BstMAI GTCTC 3 cut(s) 166, 309, 1004
BstMBI GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
BstMCI CGRYCG 1 cut(s) 400
BstMWI GCNNNNNNNGC 2 cut(s) 800, 1139
BstNSI RCATGY 1 cut(s) 917
BstPAI GACNNNNGTC 1 cut(s) 294
BstSCI CCNGG 4 cut(s) 30, 184, 431, 894
BstSLI GKGCMC 1 cut(s) 257
BstUI CGCG 2 cut(s) 208, 1133
BstV1I GCAGC 3 cut(s) 190, 694, 1098
BstV2I GAAGAC 2 cut(s) 327, 400
BstX2I RGATCY 3 cut(s) 15, 890, 975
BstXI CCANNNNNNTGG 1 cut(s) 859
BstYI RGATCY 3 cut(s) 15, 890, 975
BsuRI GGCC 6 cut(s) 35, 74, 255, 732, 941, 964
BtgI CCRYGG 1 cut(s) 1131
BtgZI GCGATG 1 cut(s) 111
BtrI CACGTC 1 cut(s) 292
BtsCI GGATG 2 cut(s) 97, 1030
BtsI GCAGTG 1 cut(s) 942
BtsIMutI CAGTG 1 cut(s) 942
Cac8I GCNNGC 6 cut(s) 47, 208, 394, 627, 712, 1087
CciI TCATGA 1 cut(s) 505
CfoI GCGC 4 cut(s) 208, 210, 625, 803
Cfr10I RCCGGY 2 cut(s) 45, 663
Cfr13I GGNCC 6 cut(s) 230, 253, 254, 731, 831, 962
Cfr42I CCGCGG 1 cut(s) 1134
CseI GACGC 1 cut(s) 1021
Csp6I GTAC 2 cut(s) 467, 1000
CspAI ACCGGT 1 cut(s) 663
CviAII CATG 5 cut(s) 211, 506, 827, 914, 1060
CviQI GTAC 2 cut(s) 467, 1000
DdeI CTNAG 6 cut(s) 528, 756, 776, 805, 847, 1101
DpnI GATC 8 cut(s) 10, 17, 190, 342, 363, 680, 892, 977
DpnII GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
DrdI GACNNNNNNGTC 1 cut(s) 404
DseDI GACNNNNNNGTC 1 cut(s) 404
Eam1104I CTCTTC 7 cut(s) 82, 107, 243, 345, 410, 549, 690
EarI CTCTTC 7 cut(s) 82, 107, 243, 345, 410, 549, 690
EciI GGCGGA 2 cut(s) 64, 903
Ecl136II GAGCTC 1 cut(s) 721
Eco130I CCWWGG 1 cut(s) 987
Eco24I GRGCYC 3 cut(s) 121, 257, 723
Eco47I GGWCC 2 cut(s) 230, 831
Eco53kI GAGCTC 1 cut(s) 721
EcoICRI GAGCTC 1 cut(s) 721
EcoO109I RGGNCCY 2 cut(s) 253, 962
EcoT14I CCWWGG 1 cut(s) 987
EcoT22I ATGCAT 1 cut(s) 828
EcoT38I GRGCYC 3 cut(s) 121, 257, 723
ErhI CCWWGG 1 cut(s) 987
Esp3I CGTCTC 2 cut(s) 309, 1004
FaeI CATG 5 cut(s) 214, 509, 830, 917, 1063
FaiI YATR 9 cut(s) 212, 507, 785, 818, 824, 828, 915, 927, 1061
FaqI GGGAC 1 cut(s) 844
FatI CATG 5 cut(s) 210, 505, 826, 913, 1059
FauI CCCGC 2 cut(s) 952, 1138
FblI GTMKAC 2 cut(s) 633, 642
Fnu4HI GCNGC 3 cut(s) 204, 708, 1112
FokI GGATG 2 cut(s) 104, 1037
FriOI GRGCYC 3 cut(s) 121, 257, 723
Fsp4HI GCNGC 3 cut(s) 204, 708, 1112
FspBI CTAG 4 cut(s) 6, 42, 798, 1086
GlaI GCGC 4 cut(s) 207, 209, 624, 802
GluI GCNGC 3 cut(s) 204, 708, 1112
GsaI CCCAGC 1 cut(s) 226
HaeII RGCGCY 1 cut(s) 804
HaeIII GGCC 6 cut(s) 35, 74, 255, 732, 941, 964
HapII CCGG 8 cut(s) 32, 46, 186, 412, 432, 551, 664, 896
HgaI GACGC 1 cut(s) 1021
HhaI GCGC 4 cut(s) 208, 210, 625, 803
Hin1II CATG 5 cut(s) 214, 509, 830, 917, 1063
Hin6I GCGC 4 cut(s) 206, 208, 623, 801
HinP1I GCGC 4 cut(s) 206, 208, 623, 801
HincII GTYRAC 1 cut(s) 299
HindII GTYRAC 1 cut(s) 299
HindIII AAGCTT 1 cut(s) 836
HinfI GANTC 3 cut(s) 52, 218, 259
HpaII CCGG 8 cut(s) 32, 46, 186, 412, 432, 551, 664, 896
HphI GGTGA 3 cut(s) 335, 421, 1048
Hpy166II GTNNAC 8 cut(s) 230, 299, 463, 469, 574, 634, 643, 1056
Hpy188I TCNGA 6 cut(s) 57, 277, 531, 613, 683, 777
Hpy188III TCNNGA 4 cut(s) 412, 506, 670, 739
Hpy8I GTNNAC 8 cut(s) 230, 299, 463, 469, 574, 634, 643, 1056
Hpy99I CGWCG 3 cut(s) 182, 196, 293
HpyAV CCTTC 4 cut(s) 305, 532, 553, 1000
HpyCH4III ACNGT 4 cut(s) 347, 401, 1044, 1139
HpyCH4IV ACGT 5 cut(s) 180, 291, 459, 465, 570
HpyCH4V TGCA 4 cut(s) 714, 763, 826, 947
HpyF10VI GCNNNNNNNGC 2 cut(s) 800, 1139
HpyF3I CTNAG 6 cut(s) 528, 756, 776, 805, 847, 1101
HpySE526I ACGT 5 cut(s) 180, 291, 459, 465, 570
Hsp92II CATG 5 cut(s) 214, 509, 830, 917, 1063
HspAI GCGC 4 cut(s) 206, 208, 623, 801
Kpn2I TCCGGA 1 cut(s) 411
KroI GCCGGC 1 cut(s) 45
KroNI GCCGGC 1 cut(s) 47
KspI CCGCGG 1 cut(s) 1134
Kzo9I GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
LmnI GCTCC 1 cut(s) 718
Lsp1109I GCAGC 3 cut(s) 190, 694, 1098
LweI GCATC 4 cut(s) 136, 364, 750, 781
MaeI CTAG 4 cut(s) 6, 42, 798, 1086
MaeII ACGT 5 cut(s) 180, 291, 459, 465, 570
MaeIII GTNAC 2 cut(s) 427, 590
MalI GATC 8 cut(s) 10, 17, 190, 342, 363, 680, 892, 977
MboI GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
MfeI CAATTG 2 cut(s) 440, 1016
MflI RGATCY 3 cut(s) 15, 890, 975
MhlI GDGCHC 4 cut(s) 121, 257, 723, 1067
MluCI AATT 5 cut(s) 440, 565, 1016, 1031, 1150
MlyI GAGTC 1 cut(s) 61
MmeI TCCRAC 3 cut(s) 255, 915, 1003
Mph1103I ATGCAT 1 cut(s) 828
MroI TCCGGA 1 cut(s) 411
MroNI GCCGGC 1 cut(s) 45
MslI CAYNNNNRTG 1 cut(s) 369
MspA1I CMGCKG 2 cut(s) 629, 1133
MspI CCGG 8 cut(s) 32, 46, 186, 412, 432, 551, 664, 896
MspR9I CCNGG 4 cut(s) 32, 186, 433, 896
MunI CAATTG 2 cut(s) 440, 1016
MvnI CGCG 2 cut(s) 208, 1133
MwoI GCNNNNNNNGC 2 cut(s) 800, 1139
NaeI GCCGGC 1 cut(s) 47
NciI CCSGG 4 cut(s) 32, 186, 433, 896
NdeII GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
NgoMIV GCCGGC 1 cut(s) 45
NheI GCTAGC 1 cut(s) 1085
NlaIII CATG 5 cut(s) 214, 509, 830, 917, 1063
NlaIV GGNNCC 4 cut(s) 255, 832, 892, 963
NmuCI GTSAC 1 cut(s) 427
NsiI ATGCAT 1 cut(s) 828
NspI RCATGY 1 cut(s) 917
NspV TTCGAA 1 cut(s) 1145
PagI TCATGA 1 cut(s) 505
PauI GCGCGC 1 cut(s) 206
PcsI WCGNNNNNNNCGW 1 cut(s) 990
PdiI GCCGGC 1 cut(s) 47
PfeI GAWTC 2 cut(s) 218, 259
PflFI GACNNNGTC 1 cut(s) 271
PflMI CCANNNNNTGG 1 cut(s) 137
PfoI TCCNGGA 1 cut(s) 184
PinAI ACCGGT 1 cut(s) 663
PkrI GCNGC 3 cut(s) 205, 709, 1113
PleI GAGTC 1 cut(s) 60
PpsI GAGTC 1 cut(s) 60
Ppu21I YACGTR 1 cut(s) 460
PshAI GACNNNNGTC 1 cut(s) 294
Psp124BI GAGCTC 1 cut(s) 723
PspFI CCCAGC 1 cut(s) 222
PspN4I GGNNCC 4 cut(s) 255, 832, 892, 963
PspOMI GGGCCC 1 cut(s) 253
PspPI GGNCC 6 cut(s) 230, 253, 254, 731, 831, 962
PsuI RGATCY 3 cut(s) 15, 890, 975
PsyI GACNNNGTC 1 cut(s) 271
PteI GCGCGC 1 cut(s) 206
RsaI GTAC 2 cut(s) 468, 1001
RsaNI GTAC 2 cut(s) 467, 1000
RseI CAYNNNNRTG 1 cut(s) 369
SacI GAGCTC 1 cut(s) 723
SacII CCGCGG 1 cut(s) 1134
SatI GCNGC 3 cut(s) 204, 708, 1112
Sau3AI GATC 8 cut(s) 8, 15, 188, 340, 361, 678, 890, 975
Sau96I GGNCC 6 cut(s) 230, 253, 254, 731, 831, 962
SchI GAGTC 1 cut(s) 61
ScrFI CCNGG 4 cut(s) 32, 186, 433, 896
SduI GDGCHC 4 cut(s) 121, 257, 723, 1067
SfaNI GCATC 4 cut(s) 136, 364, 750, 781
Sfr303I CCGCGG 1 cut(s) 1134
SfuI TTCGAA 1 cut(s) 1145
SgrBI CCGCGG 1 cut(s) 1134
SinI GGWCC 2 cut(s) 230, 831
SmiMI CAYNNNNRTG 1 cut(s) 369
Sse9I AATT 5 cut(s) 440, 565, 1016, 1031, 1150
SsiI CCGC 7 cut(s) 49, 629, 888, 959, 1083, 1131, 1133
SspMI CTAG 4 cut(s) 6, 42, 798, 1086
SstI GAGCTC 1 cut(s) 723
StyD4I CCNGG 4 cut(s) 30, 184, 431, 894
StyI CCWWGG 1 cut(s) 987
TaaI ACNGT 4 cut(s) 347, 401, 1044, 1139
TaiI ACGT 5 cut(s) 183, 294, 462, 468, 573
TaqI TCGA 7 cut(s) 11, 110, 121, 177, 789, 993, 1145
TasI AATT 5 cut(s) 440, 565, 1016, 1031, 1150
TfiI GAWTC 2 cut(s) 218, 259
TscAI CASTG 1 cut(s) 949
TseFI GTSAC 1 cut(s) 427
TseI GCWGC 3 cut(s) 203, 707, 1111
Tsp45I GTSAC 1 cut(s) 427
TspDTI ATGAA 5 cut(s) 227, 231, 351, 494, 708
TspGWI ACGGA 2 cut(s) 104, 944
TspRI CASTG 1 cut(s) 949
Tth111I GACNNNGTC 1 cut(s) 271
Van91I CCANNNNNTGG 1 cut(s) 137
VpaK11BI GGWCC 2 cut(s) 230, 831
XapI RAATTY 1 cut(s) 1031
XceI RCATGY 1 cut(s) 917
XmiI GTMKAC 2 cut(s) 633, 642
XspI CTAG 4 cut(s) 6, 42, 798, 1086
Zsp2I ATGCAT 1 cut(s) 828
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.