Rh2BG298000

protein desumoylation

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
34034679 .. 34037769
3091 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG298000.1

Sequence Viewer

Length: 2121 bp
ATGCCGCCGAAGGTCTACACAAAGAAGGCACCCAAAAGGGCAAAACCGAGCAGCTCCAGTAACTCTGATGGAGCATCGGCTTCGGCGACTGTCTCTGAGGTCTCGAACCAAAATTCTCCAATTTTGGAGTCCGCAAAGAAAGCTTCTGTTAACGGCACCGAAGCGGTGGTTGAGGTACCTAAACTGAAACCTATTTCCGATGAAGCGGTAATTGAGGCACCGAAACCTACTTTCGATGAACCGGTGGTTGAGGCGGAGAAACCTCCTTCCAATGATACGCGGTCGCGAAAAGAGAAGGCACCAGAGGATTTAGAGTTGTCTGCCTCACCTGCCGAAGCCAAAGAGGTGAAGGATCGAAAGAAGCTCATCATGAAGAAGAAAGCCTCCGGTCGTTCCATGAGCTTTTTGAACTACCTGAACATTCAACACAAACAAATCAATCCCCCAAAACTAAACCATGATTTTCGAGTTGAGATATCTCAAAAATGGAAAGAGCTTCCAGCTGAAGAGAAGGAACAGTATGTAGTGACTGATCGATGTGGTCAGTCATCAGTTTCTGAGGAAGAGTTGCTTGAGTTGGTTCGGATTGATACCCGTTGCTCTCCAGACCGCTTCAGGTCTTTGGTTGCAGACTTTAGCGATGAGAAAAAGGCAGCCTGTTCAGCAATTGGATTTGATGTGTTGTTGAAGATGTCAGGAAGGAAAATTCACCACTCTATGTTGCGTGTCCTTGTGGACTCCGTAGACCCCAATGCATGTACTATAACTATGCACGGAAAGAAGATTGAAATGGATGCAAGTGACTTTGAAAATGTGATGGGGTTGAAGAATGCTGGGTCCGAGGTCGACTTTAAAGGTTCCACTAATGATCACCCTGAGTTGATGGCGATAATAAACTCCTTGTGTGGGAAGGATAAGAAGATCAGTTTAAGGGACGTGCAGAACTACCTGAAGGATACAGAAGAAGTTGACAACAAGTTCAAGCGCCTGTTTGTGTTGTTCACAATGAGCACCATCCTTAGCCCATCTGCCTCACTGACAATACCAAAGAAGTGGCTGCTGGCCCTGAAGGACACTCGCCTGATTAGCTCTTTAAACTGGGCTGATTACTCATTCAAATGTTTGATGGAGGCCATCGTTGGCGATCGTGTTGGTAGTGGAGATCAGGCCAAAGCATATGGGGTGATTAAGAAAGAAATGTCTGACTTGGCTGCTAAAGTGAATGGGTTGGAAAATAATATGTGCAATCTGAGAGATGATATGATGGGAAAGATGGACAAAGTCTTGAGTATGCTGAACACTCTGACTGCACAAAATGTGAATGTCAATCAGAACCTTCAAACTGATGGCTTAGCAGAAAAAGTAAGCCCCAAGAAAGTTTCAAAAAAGAAAGCTGGAGAGCAACAGGAGGTGTTACAGGTACATGGGGAAGACTTGCAACCAAAAAAGAAGACCTCCTTGATTTGCCTATCTGACTCAACATCTGTAGTCAGCCCACTGAAAAGTATGAAGAAAGTTGATGCCAACCCCACGACCAAGAGTAACATAGAGAAGATTGGTAACTTCAAAGTCAAGGGAGATCGGGAGGAGGCTGACAAAGGAGTGCTCAGGTTTGTTTATGATGTGTCAGCTGAAGAGAAGGAGACCATTGTGGATAGTGAAAATTTCTTCACTAGTCGAAAAGCAGTTTGGTCACTTAAACCTAACGGATGGGTTGAAGATGATATTATCAATTTGTTTAGTGACTATCTATTTCTAGGACGCTTCCCAAGCAATAGATGTTGTTACTTCACAACATACTTTTGTCAGAAGATGAAAAGCTACAATGACAGAGACATGTGTGGAGATTCGGCAAGGGCAGTTTCGAAGGGTTTGGGTGTAAAGAGATTTGAGAATGGCATACCTGAGTGCGAGAAGATTTTCATACCAATGCATGACATCAATCATTGGTACCTCCTTGTTGTGCGTCTTGATAATCAGACAGGAGAAGTGTGGGATAGCTTACAATGTAACAGGAGACGAATGAATCTGTGCAAAGCCTCTGTAAATGATGTTCTTGCATTTGAATCTTTTTGTGTTGAAAACCCTATAAGCCTTGTACTTATCATTATTTTTTCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

706

Amino Acids

79.05

Weight (kDa)

8.27

Isoelectric Point (pI)

38.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1985 PF09331 251 - 377 1e-06 Domain of unknown function (DUF1985)
Peptidase_C48 PF02902 571 - 673 4.9e-10 Ulp1 protease family, C-terminal catalytic domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 337
Acc36I ACCTGC 1 cut(s) 337
Acc65I GGTACC 2 cut(s) 175, 1950
AccB1I GGYRCC 6 cut(s) 28, 155, 175, 217, 298, 1950
AccI GTMKAC 3 cut(s) 15, 744, 846
AccII CGCG 2 cut(s) 280, 286
AciI CCGC 7 cut(s) 5, 132, 164, 206, 254, 280, 610
AclWI GGATC 1 cut(s) 360
AcsI RAATTY 3 cut(s) 112, 705, 1663
AcuI CTGAAG 5 cut(s) 525, 598, 971, 1088, 1653
AfaI GTAC 5 cut(s) 177, 760, 1422, 1952, 2100
AfiI CCNNNNNNNGG 1 cut(s) 906
AflIII ACRYGT 1 cut(s) 1836
AgeI ACCGGT 1 cut(s) 241
AhlI ACTAGT 1 cut(s) 1673
AjiI CACGTC 1 cut(s) 937
AjuI GAANNNNNNNTTGG 2 cut(s) 1672, 1704
Alw21I GWGCWC 2 cut(s) 1013, 1608
Alw26I GTCTC 5 cut(s) 97, 106, 1637, 1827, 2011
AlwI GGATC 1 cut(s) 360
AlwNI CAGNNNCTG 1 cut(s) 557
AoxI GGCC 3 cut(s) 1062, 1131, 1167
ApeKI GCWGC 4 cut(s) 51, 653, 1057, 1211
ApoI RAATTY 3 cut(s) 112, 705, 1663
AsiGI ACCGGT 1 cut(s) 241
Asp700I GAANNNNTTC 1 cut(s) 1919
Asp718I GGTACC 2 cut(s) 175, 1950
AspLEI GCGC 1 cut(s) 987
AspS9I GGNCC 2 cut(s) 837, 1063
AsuHPI GGTGA 5 cut(s) 318, 358, 701, 863, 1195
AsuII TTCGAA 1 cut(s) 1865
AvaII GGWCC 1 cut(s) 837
BanI GGYRCC 6 cut(s) 28, 155, 175, 217, 298, 1950
BbsI GAAGAC 2 cut(s) 1437, 1457
Bbv12I GWGCWC 2 cut(s) 1013, 1608
BbvI GCAGC 4 cut(s) 63, 665, 1044, 1198
BceAI ACGGC 1 cut(s) 169
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BciVI GTATCC 1 cut(s) 949
BclI TGATCA 1 cut(s) 868
BcoDI GTCTC 5 cut(s) 97, 106, 1637, 1827, 2011
BcuI ACTAGT 1 cut(s) 1673
BfaI CTAG 2 cut(s) 1674, 1757
BfmI CTRYAG 1 cut(s) 1485
BfoI RGCGCY 1 cut(s) 988
BfuAI ACCTGC 1 cut(s) 337
BfuI GTATCC 1 cut(s) 949
BisI GCNGC 5 cut(s) 5, 52, 654, 1058, 1212
BlpI GCTNAGC 1 cut(s) 1351
BlsI GCNGC 5 cut(s) 6, 53, 655, 1059, 1213
Bme18I GGWCC 1 cut(s) 837
BmgBI CACGTC 1 cut(s) 937
BmgT120I GGNCC 2 cut(s) 837, 1063
BmiI GGNNCC 8 cut(s) 30, 157, 177, 219, 300, 838, 859, 1952
BmrI ACTGGG 1 cut(s) 1108
BmsI GCATC 3 cut(s) 83, 784, 1510
BmuI ACTGGG 1 cut(s) 1108
BpiI GAAGAC 2 cut(s) 1437, 1457
BpmI CTGGAG 3 cut(s) 40, 588, 1416
Bpu10I CCTNAGC 2 cut(s) 1019, 1607
Bpu1102I GCTNAGC 1 cut(s) 1351
Bpu14I TTCGAA 1 cut(s) 1865
BpuEI CTTGAG 2 cut(s) 593, 1306
Bsa29I ATCGAT 1 cut(s) 535
BsaI GGTCTC 2 cut(s) 106, 1637
BsaJI CCNNGG 1 cut(s) 840
BsaWI WCCGGW 2 cut(s) 241, 386
Bsc4I CCNNNNNNNGG 1 cut(s) 906
Bse118I RCCGGY 1 cut(s) 241
Bse1I ACTGG 2 cut(s) 57, 1103
BseCI ATCGAT 1 cut(s) 535
BseDI CCNNGG 1 cut(s) 840
BseGI GGATG 3 cut(s) 799, 1014, 1715
BseLI CCNNNNNNNGG 1 cut(s) 906
BseMII CTCAG 6 cut(s) 87, 549, 867, 1241, 1621, 1896
BseNI ACTGG 2 cut(s) 57, 1103
BseRI GAGGAG 1 cut(s) 1601
BseXI GCAGC 4 cut(s) 63, 665, 1044, 1198
BseYI CCCAGC 1 cut(s) 833
BsgI GTGCAG 2 cut(s) 959, 1293
Bsh1236I CGCG 2 cut(s) 280, 286
Bsh1285I CGRYCG 3 cut(s) 284, 391, 1147
BshFI GGCC 3 cut(s) 1064, 1133, 1169
BshNI GGYRCC 6 cut(s) 28, 155, 175, 217, 298, 1950
BshTI ACCGGT 1 cut(s) 241
BshVI ATCGAT 1 cut(s) 535
BsiEI CGRYCG 3 cut(s) 284, 391, 1147
BsiHKAI GWGCWC 2 cut(s) 1013, 1608
BsiSI CCGG 2 cut(s) 242, 387
BslFI GGGAC 1 cut(s) 947
BslI CCNNNNNNNGG 1 cut(s) 906
BsmAI GTCTC 5 cut(s) 97, 106, 1637, 1827, 2011
BsmBI CGTCTC 1 cut(s) 2011
BsmFI GGGAC 1 cut(s) 947
BsmI GAATGC 1 cut(s) 835
BsnI GGCC 3 cut(s) 1064, 1133, 1169
Bso31I GGTCTC 2 cut(s) 106, 1637
Bsp119I TTCGAA 1 cut(s) 1865
Bsp1286I GDGCHC 2 cut(s) 1013, 1608
Bsp143I GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
Bsp1720I GCTNAGC 1 cut(s) 1351
Bsp68I TCGCGA 1 cut(s) 286
BspACI CCGC 7 cut(s) 5, 132, 164, 206, 254, 280, 610
BspANI GGCC 3 cut(s) 1064, 1133, 1169
BspCNI CTCAG 6 cut(s) 88, 550, 868, 1242, 1620, 1897
BspDI ATCGAT 1 cut(s) 535
BspFNI CGCG 2 cut(s) 280, 286
BspHI TCATGA 1 cut(s) 369
BspLI GGNNCC 8 cut(s) 30, 157, 177, 219, 300, 838, 859, 1952
BspMI ACCTGC 1 cut(s) 337
BspPI GGATC 1 cut(s) 360
BspT104I TTCGAA 1 cut(s) 1865
BspT107I GGYRCC 6 cut(s) 28, 155, 175, 217, 298, 1950
BspTNI GGTCTC 2 cut(s) 106, 1637
BsrFI RCCGGY 1 cut(s) 241
BsrI ACTGG 2 cut(s) 57, 1103
BssAI RCCGGY 1 cut(s) 241
BssECI CCNNGG 1 cut(s) 840
BssMI GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
Bst4CI ACNGT 2 cut(s) 91, 519
Bst6I CTCTTC 3 cut(s) 501, 558, 1629
BstBI TTCGAA 1 cut(s) 1865
BstC8I GCNNGC 1 cut(s) 1062
BstDEI CTNAG 8 cut(s) 96, 558, 876, 1019, 1250, 1351, 1607, 1905
BstF5I GGATG 3 cut(s) 799, 1014, 1715
BstFNI CGCG 2 cut(s) 280, 286
BstH2I RGCGCY 1 cut(s) 988
BstHHI GCGC 1 cut(s) 987
BstKTI GATC 7 cut(s) 355, 535, 871, 924, 1147, 1165, 1582
BstMAI GTCTC 5 cut(s) 97, 106, 1637, 1827, 2011
BstMBI GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
BstMCI CGRYCG 3 cut(s) 284, 391, 1147
BstMWI GCNNNNNNNGC 5 cut(s) 140, 329, 662, 1086, 1770
BstNSI RCATGY 2 cut(s) 759, 1840
BstSFI CTRYAG 1 cut(s) 1485
BstUI CGCG 2 cut(s) 280, 286
BstV1I GCAGC 4 cut(s) 63, 665, 1044, 1198
BstV2I GAAGAC 2 cut(s) 1437, 1457
BstXI CCANNNNNNTGG 1 cut(s) 1053
Bsu15I ATCGAT 1 cut(s) 535
BsuI GTATCC 1 cut(s) 949
BsuRI GGCC 3 cut(s) 1064, 1133, 1169
BsuTUI ATCGAT 1 cut(s) 535
BtgZI GCGATG 1 cut(s) 654
BtrI CACGTC 1 cut(s) 937
BtsCI GGATG 3 cut(s) 799, 1014, 1715
BtsIMutI CAGTG 2 cut(s) 1034, 1496
BtuMI TCGCGA 1 cut(s) 286
BveI ACCTGC 1 cut(s) 337
Cac8I GCNNGC 1 cut(s) 1062
CaiI CAGNNNCTG 1 cut(s) 557
CciI TCATGA 1 cut(s) 369
CfoI GCGC 1 cut(s) 987
Cfr10I RCCGGY 1 cut(s) 241
Cfr13I GGNCC 2 cut(s) 837, 1063
ClaI ATCGAT 1 cut(s) 535
CseI GACGC 2 cut(s) 1770, 1955
Csp6I GTAC 5 cut(s) 176, 759, 1421, 1951, 2099
CspAI ACCGGT 1 cut(s) 241
CviAII CATG 7 cut(s) 370, 397, 458, 756, 1424, 1837, 1934
CviQI GTAC 5 cut(s) 176, 759, 1421, 1951, 2099
DdeI CTNAG 8 cut(s) 96, 558, 876, 1019, 1250, 1351, 1607, 1905
DpnI GATC 7 cut(s) 354, 534, 870, 923, 1146, 1164, 1581
DpnII GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
DraI TTTAAA 2 cut(s) 853, 1095
Eam1104I CTCTTC 3 cut(s) 501, 558, 1629
EarI CTCTTC 3 cut(s) 501, 558, 1629
EciI GGCGGA 1 cut(s) 269
Eco31I GGTCTC 2 cut(s) 106, 1637
Eco32I GATATC 1 cut(s) 477
Eco47I GGWCC 1 cut(s) 837
Eco57I CTGAAG 5 cut(s) 525, 598, 971, 1088, 1653
EcoRV GATATC 1 cut(s) 477
EcoT22I ATGCAT 2 cut(s) 757, 1935
Esp3I CGTCTC 1 cut(s) 2011
FaeI CATG 7 cut(s) 373, 400, 461, 759, 1427, 1840, 1937
FalI AAGNNNNNCTT 4 cut(s) 555, 587, 1442, 1474
FaqI GGGAC 1 cut(s) 947
FatI CATG 7 cut(s) 369, 396, 457, 755, 1423, 1836, 1933
FauNDI CATATG 1 cut(s) 1177
FbaI TGATCA 1 cut(s) 868
FblI GTMKAC 3 cut(s) 15, 744, 846
Fnu4HI GCNGC 5 cut(s) 5, 52, 654, 1058, 1212
FokI GGATG 3 cut(s) 806, 1001, 1722
Fsp4HI GCNGC 5 cut(s) 5, 52, 654, 1058, 1212
FspBI CTAG 2 cut(s) 1674, 1757
GlaI GCGC 1 cut(s) 986
GluI GCNGC 5 cut(s) 5, 52, 654, 1058, 1212
GsaI CCCAGC 1 cut(s) 837
GsuI CTGGAG 3 cut(s) 40, 588, 1416
HaeII RGCGCY 1 cut(s) 988
HaeIII GGCC 3 cut(s) 1064, 1133, 1169
HapII CCGG 2 cut(s) 242, 387
HgaI GACGC 2 cut(s) 1770, 1955
HhaI GCGC 1 cut(s) 987
Hin1II CATG 7 cut(s) 373, 400, 461, 759, 1427, 1840, 1937
Hin6I GCGC 1 cut(s) 985
HinP1I GCGC 1 cut(s) 985
HincII GTYRAC 3 cut(s) 151, 847, 970
HindII GTYRAC 3 cut(s) 151, 847, 970
HindIII AAGCTT 1 cut(s) 141
HinfI GANTC 6 cut(s) 128, 737, 1475, 1847, 2026, 2066
HpaI GTTAAC 1 cut(s) 151
HpaII CCGG 2 cut(s) 242, 387
HphI GGTGA 5 cut(s) 318, 358, 701, 863, 1195
Hpy166II GTNNAC 7 cut(s) 16, 151, 736, 745, 847, 970, 1002
Hpy188III TCNNGA 8 cut(s) 103, 285, 370, 605, 696, 1285, 1583, 1970
Hpy8I GTNNAC 7 cut(s) 16, 151, 736, 745, 847, 970, 1002
HpyCH4III ACNGT 2 cut(s) 91, 519
HpyCH4IV ACGT 1 cut(s) 936
HpyF10VI GCNNNNNNNGC 5 cut(s) 140, 329, 662, 1086, 1770
HpyF3I CTNAG 8 cut(s) 96, 558, 876, 1019, 1250, 1351, 1607, 1905
HpySE526I ACGT 1 cut(s) 936
Hsp92II CATG 7 cut(s) 373, 400, 461, 759, 1427, 1840, 1937
HspAI GCGC 1 cut(s) 985
KpnI GGTACC 2 cut(s) 179, 1954
Ksp22I TGATCA 1 cut(s) 868
KspAI GTTAAC 1 cut(s) 151
Kzo9I GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
LmnI GCTCC 2 cut(s) 59, 71
Lsp1109I GCAGC 4 cut(s) 63, 665, 1044, 1198
LweI GCATC 3 cut(s) 83, 784, 1510
MaeI CTAG 2 cut(s) 1674, 1757
MaeII ACGT 1 cut(s) 936
MalI GATC 7 cut(s) 354, 534, 870, 923, 1146, 1164, 1581
MboI GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
MfeI CAATTG 1 cut(s) 666
MhlI GDGCHC 2 cut(s) 1013, 1608
MluCI AATT 7 cut(s) 112, 120, 210, 666, 705, 1663, 1732
MlyI GAGTC 3 cut(s) 137, 731, 1469
MmeI TCCRAC 1 cut(s) 1209
Mph1103I ATGCAT 2 cut(s) 757, 1935
MroXI GAANNNNTTC 1 cut(s) 1919
MseI TTAA 6 cut(s) 150, 852, 929, 1094, 1188, 1698
MslI CAYNNNNRTG 2 cut(s) 1117, 1928
MspA1I CMGCKG 2 cut(s) 503, 1631
MspI CCGG 2 cut(s) 242, 387
MunI CAATTG 1 cut(s) 666
Mva1269I GAATGC 1 cut(s) 835
MvnI CGCG 2 cut(s) 280, 286
MwoI GCNNNNNNNGC 5 cut(s) 140, 329, 662, 1086, 1770
NdeI CATATG 1 cut(s) 1177
NdeII GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
NlaIII CATG 7 cut(s) 373, 400, 461, 759, 1427, 1840, 1937
NlaIV GGNNCC 8 cut(s) 30, 157, 177, 219, 300, 838, 859, 1952
NmuCI GTSAC 4 cut(s) 526, 800, 1692, 1742
NruI TCGCGA 1 cut(s) 286
NsiI ATGCAT 2 cut(s) 757, 1935
NspI RCATGY 2 cut(s) 759, 1840
NspV TTCGAA 1 cut(s) 1865
PagI TCATGA 1 cut(s) 369
PaqCI CACCTGC 1 cut(s) 337
PciI ACATGT 1 cut(s) 1836
PcsI WCGNNNNNNNCGW 1 cut(s) 83
PctI GAATGC 1 cut(s) 835
PdmI GAANNNNTTC 1 cut(s) 1919
PfeI GAWTC 3 cut(s) 1847, 2026, 2066
PflFI GACNNNGTC 1 cut(s) 1280
PinAI ACCGGT 1 cut(s) 241
PkrI GCNGC 5 cut(s) 6, 53, 655, 1059, 1213
Ple19I CGATCG 1 cut(s) 1147
PleI GAGTC 3 cut(s) 136, 731, 1469
PpsI GAGTC 3 cut(s) 136, 731, 1469
PscI ACATGT 1 cut(s) 1836
PspFI CCCAGC 1 cut(s) 833
PspN4I GGNNCC 8 cut(s) 30, 157, 177, 219, 300, 838, 859, 1952
PspPI GGNCC 2 cut(s) 837, 1063
PsrI GAACNNNNNNTAC 2 cut(s) 2037, 2069
PstNI CAGNNNCTG 1 cut(s) 557
PsyI GACNNNGTC 1 cut(s) 1280
PvuI CGATCG 1 cut(s) 1147
PvuII CAGCTG 2 cut(s) 503, 1631
RruI TCGCGA 1 cut(s) 286
RsaI GTAC 5 cut(s) 177, 760, 1422, 1952, 2100
RsaNI GTAC 5 cut(s) 176, 759, 1421, 1951, 2099
RseI CAYNNNNRTG 2 cut(s) 1117, 1928
SalI GTCGAC 1 cut(s) 845
SaqAI TTAA 6 cut(s) 150, 852, 929, 1094, 1188, 1698
SatI GCNGC 5 cut(s) 5, 52, 654, 1058, 1212
Sau3AI GATC 7 cut(s) 352, 532, 868, 921, 1144, 1162, 1579
Sau96I GGNCC 2 cut(s) 837, 1063
SchI GAGTC 3 cut(s) 137, 731, 1469
SduI GDGCHC 2 cut(s) 1013, 1608
SfaNI GCATC 3 cut(s) 83, 784, 1510
SfcI CTRYAG 1 cut(s) 1485
SfuI TTCGAA 1 cut(s) 1865
SinI GGWCC 1 cut(s) 837
SmiMI CAYNNNNRTG 2 cut(s) 1117, 1928
SmlI CTYRAG 2 cut(s) 572, 1285
SmoI CTYRAG 2 cut(s) 572, 1285
SpeI ACTAGT 1 cut(s) 1673
Sse9I AATT 7 cut(s) 112, 120, 210, 666, 705, 1663, 1732
SsiI CCGC 7 cut(s) 5, 132, 164, 206, 254, 280, 610
SspMI CTAG 2 cut(s) 1674, 1757
TaaI ACNGT 2 cut(s) 91, 519
TaiI ACGT 1 cut(s) 939
TaqI TCGA 8 cut(s) 104, 234, 355, 466, 535, 846, 1678, 1865
TasI AATT 7 cut(s) 112, 120, 210, 666, 705, 1663, 1732
TatI WGTACW 2 cut(s) 758, 2098
TauI GCSGC 1 cut(s) 7
TfiI GAWTC 3 cut(s) 1847, 2026, 2066
Tru1I TTAA 6 cut(s) 150, 852, 929, 1094, 1188, 1698
Tru9I TTAA 6 cut(s) 150, 852, 929, 1094, 1188, 1698
TscAI CASTG 2 cut(s) 1041, 1503
TseFI GTSAC 4 cut(s) 526, 800, 1692, 1742
TseI GCWGC 4 cut(s) 51, 653, 1057, 1211
Tsp45I GTSAC 4 cut(s) 526, 800, 1692, 1742
TspDTI ATGAA 7 cut(s) 216, 252, 386, 1523, 1829, 1912, 2039
TspGWI ACGGA 3 cut(s) 730, 789, 1722
TspRI CASTG 2 cut(s) 1041, 1503
Tth111I GACNNNGTC 1 cut(s) 1280
VpaK11BI GGWCC 1 cut(s) 837
XapI RAATTY 3 cut(s) 112, 705, 1663
XceI RCATGY 2 cut(s) 759, 1840
XmiI GTMKAC 3 cut(s) 15, 744, 846
XmnI GAANNNNTTC 1 cut(s) 1919
XspI CTAG 2 cut(s) 1674, 1757
Zsp2I ATGCAT 2 cut(s) 757, 1935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.