FvH4_3g26550

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000269
Physical Location & Seq
Forward (+)
19624145 .. 19626707
2563 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g26550.t1

Sequence Viewer

Length: 1749 bp
ATGCCCCCTAAAAAGAAGACTGACCCTCCGACTCAAGGGGTTGATCAGAGCCAGAATTTAGGGTTAGACGAGGGAGGTACGAGAAGGAGTAGCAGGCTCCAGGGTCGTGTTCCAAGCAGCAGCGAAAACACATTCTCCGACTGTCGGACCGCAGTTATTGTAGGATCAAAATCGGCGGCCAATGAAGCAGACCCTAAACGAGGAAGACCCTCCAAAAAGGGGGCATCCAACAGAACTGTGGCAGCGGAATCGGTGAATGAATCTGCAGTGATTGGCCAAATTACAAAAGAAGTTGTGGCTGGGTCATCGAGACCCGAAATCGGGGAAGGGGCAGAGGAATCGGTTCATGTTGAGGAAGTAGTACCTCAAAACCAGATTGAAGTTCACACCACTCTACGTGTTGAAACCGAGATGCATGTCAATGAAGATGTTATGCAGAGCAGAAAGGACGAGAGCTTCATCTCTCCACGCAAATTTGTTCATATTGGGAAGAAGAGGAGGGCCAATCATCGTTCGAGCTTGTTCAATTTCATTAACATCCAACACAAACAATCACATCCGCAACAGAAGTTAAGCACGGTCCGCTTGGAGTTATCCCAGCAGTGGAAAGATCTTCCATTGGAGGAGAAGCAGAAGTACGTGCCGGAGGCAAATCCATTGGAGGAGAATGTTGGGACTGAGGATTTTGTGGATCTGTTTAGCATAAACTGTCGATGCTCTCCAGAACGTTTCAAGAACTTAGTCTCTGGGTTTAGTGATGAGCAAAAGGCGGCGTGTAAAGCATTTGGTTTTGGTGTTTTACTGGAGATTGCTGGGAAGAGGCTGCGCAAGAGCACGGTGAGCTATCTTGTGGAGTGTGTAGACCCCGCTGAATGTACTATAAAGATTCACGGGAAGACATTGGAAATCTCTCCCAATGACTTTAGTCGGGTGATGGGATTGAAGAATTCTGGGAAAGAGGTGGAATTTGTTGGTCCTATTAAAGATAACCCTGACCTCATGAGTATAGTGCAAGAGTTCTCTACAAAGGAAGGCAAATCAATGATGGTTTTGAAGGATGTGGAGAACTACTTGAAGAATAAAGAAGCACCAGTGGATGAGAAGTTCAAGCGGCTATTTGTGCTTTACACAATGTGCACAATCCTTACCCCTTCTGCCTCCCTAATGATACCACAGAAGTGGATGCTGCCGCTGAGGGATACGAGCCTCATACGCACATACAACTGGTCTGAACACGCTTTCAAGTATTTGATGAAAGGAATTAGTGAGTTCCAGAAGATACCCCAAGATACACAGACCTCCAATAATCCACAAGGGAGGCAGACCTACATCAACGGCTGCGTCCTTTTTTTGCAGCTTTTTTACTTTAACTGCGTGGTGGCACCTAATCACTATGTGGACAGGTCAATGTACCCAGTTGAAGCTTGGGGGGATACACAGGCCGACAAGGTTATGGCTTACACCAAAAGCAAAGGCGGGTTGATGTCTGCCCAAATAGAGGTGCGTAAGCCCGTTGATCGTGTTTGTGGAAGAAGTGAAGCAATTGATGAGGGATTGTCTCATAGGGTGGCTATTTTAGAGGAAAGCTTCAAGGAGTACAAGGCTCAGACATCAGAAAAGTTGGGGATGATACTGTCCGTGCTGGAAAAAATGGTAAGTAAGAATGTGAACTCGGGCAAGGATGCAACAGTAGCAAACCTGCTTCATCTTCACCTTCACCTACCAGAGATGCTCCAAACAAGGAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

583

Amino Acids

65.46

Weight (kDa)

8.59

Isoelectric Point (pI)

52.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1985 PF09331 286 - 419 2.4e-07 Domain of unknown function (DUF1985)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 827
Acc36I ACCTGC 1 cut(s) 1707
AccB1I GGYRCC 1 cut(s) 1381
AccI GTMKAC 1 cut(s) 861
AclI AACGTT 1 cut(s) 727
AclWI GGATC 2 cut(s) 172, 699
AcoI YGGCCR 2 cut(s) 177, 274
AcsI RAATTY 4 cut(s) 55, 473, 946, 965
AdeI CACNNNGTG 2 cut(s) 1134, 1396
AfaI GTAC 6 cut(s) 79, 363, 638, 877, 1412, 1598
AfiI CCNNNNNNNGG 8 cut(s) 35, 144, 200, 219, 320, 321, 603, 1498
AflIII ACRYGT 1 cut(s) 397
AjnI CCWGG 1 cut(s) 99
AleI CACNNNNGTG 1 cut(s) 1177
AloI GAACNNNNNNTCC 2 cut(s) 1088, 1120
AluBI AGCT 6 cut(s) 456, 519, 843, 1357, 1424, 1587
AluI AGCT 6 cut(s) 456, 519, 843, 1357, 1424, 1587
Alw21I GWGCWC 2 cut(s) 836, 1139
Alw26I GTCTC 3 cut(s) 304, 748, 1563
Alw44I GTGCAC 1 cut(s) 1135
AlwI GGATC 2 cut(s) 172, 699
Ama87I CYCGRG 1 cut(s) 1672
AoxI GGCC 4 cut(s) 177, 274, 501, 1440
ApaLI GTGCAC 1 cut(s) 1135
ApeKI GCWGC 7 cut(s) 117, 120, 242, 823, 1186, 1338, 1354
ApoI RAATTY 4 cut(s) 55, 473, 946, 965
Asp700I GAANNNNTTC 1 cut(s) 342
AspLEI GCGC 1 cut(s) 828
AspS9I GGNCC 4 cut(s) 147, 501, 580, 974
AsuHPI GGTGA 5 cut(s) 265, 850, 943, 1703, 1709
AvaI CYCGRG 1 cut(s) 1672
AvaII GGWCC 3 cut(s) 147, 580, 974
BaeGI GKGCMC 1 cut(s) 1139
BalI TGGCCA 1 cut(s) 276
BanI GGYRCC 1 cut(s) 1381
BarI GAAGNNNNNNTAC 2 cut(s) 620, 652
BbsI GAAGAC 3 cut(s) 23, 211, 902
Bbv12I GWGCWC 2 cut(s) 836, 1139
BbvCI CCTCAGC 1 cut(s) 1193
BbvI GCAGC 7 cut(s) 129, 132, 254, 810, 1173, 1325, 1366
BccI CCATC 2 cut(s) 928, 1039
BceAI ACGGC 1 cut(s) 1351
BcgI CGANNNNNNTGC 4 cut(s) 231, 265, 321, 355
BciT130I CCWGG 1 cut(s) 101
BciVI GTATCC 2 cut(s) 1192, 1426
BclI TGATCA 1 cut(s) 43
BcoDI GTCTC 3 cut(s) 304, 748, 1563
BfmI CTRYAG 1 cut(s) 264
BfuAI ACCTGC 1 cut(s) 1707
BfuI GTATCC 2 cut(s) 1192, 1426
BglII AGATCT 1 cut(s) 610
Bme1390I CCNGG 1 cut(s) 101
Bme18I GGWCC 3 cut(s) 147, 580, 974
BmeT110I CYCGRG 1 cut(s) 1672
BmgT120I GGNCC 4 cut(s) 147, 501, 580, 974
BmiI GGNNCC 2 cut(s) 98, 1383
BmrFI CCNGG 1 cut(s) 101
BmrI ACTGGG 1 cut(s) 1409
BmsI GCATC 6 cut(s) 233, 402, 704, 1173, 1672, 1719
BmuI ACTGGG 1 cut(s) 1409
BoxI GACNNNNGTC 1 cut(s) 924
BpiI GAAGAC 3 cut(s) 23, 211, 902
BpmI CTGGAG 3 cut(s) 83, 705, 824
Bpu10I CCTNAGC 1 cut(s) 1193
BpuEI CTTGAG 1 cut(s) 18
BsaAI YACGTR 2 cut(s) 398, 640
BsaBI GATNNNNATC 1 cut(s) 169
BsaI GGTCTC 1 cut(s) 304
BsaJI CCNNGG 1 cut(s) 100
BsaXI ACNNNNNCTCC 4 cut(s) 10, 40, 119, 149
Bsc4I CCNNNNNNNGG 8 cut(s) 35, 144, 200, 219, 320, 321, 603, 1498
Bse1I ACTGG 4 cut(s) 807, 1091, 1229, 1415
Bse8I GATNNNNATC 1 cut(s) 169
BseBI CCWGG 1 cut(s) 101
BseDI CCNNGG 1 cut(s) 100
BseGI GGATG 8 cut(s) 224, 537, 556, 1063, 1102, 1188, 1632, 1687
BseJI GATNNNNATC 1 cut(s) 169
BseLI CCNNNNNNNGG 8 cut(s) 35, 144, 200, 219, 320, 321, 603, 1498
BseMII CTCAG 3 cut(s) 669, 1184, 1619
BseNI ACTGG 4 cut(s) 807, 1091, 1229, 1415
BseRI GAGGAG 3 cut(s) 511, 638, 677
BseSI GKGCMC 1 cut(s) 1139
BseXI GCAGC 7 cut(s) 129, 132, 254, 810, 1173, 1325, 1366
BseYI CCCAGC 3 cut(s) 299, 597, 812
BshFI GGCC 4 cut(s) 179, 276, 503, 1442
BshNI GGYRCC 1 cut(s) 1381
BsiHKAI GWGCWC 2 cut(s) 836, 1139
BsiHKCI CYCGRG 1 cut(s) 1672
BsiSI CCGG 1 cut(s) 644
BslFI GGGAC 1 cut(s) 688
BslI CCNNNNNNNGG 8 cut(s) 35, 144, 200, 219, 320, 321, 603, 1498
BsmAI GTCTC 3 cut(s) 304, 748, 1563
BsmFI GGGAC 1 cut(s) 688
BsnI GGCC 4 cut(s) 179, 276, 503, 1442
Bso31I GGTCTC 1 cut(s) 304
BsoBI CYCGRG 1 cut(s) 1672
Bsp1286I GDGCHC 2 cut(s) 836, 1139
Bsp143I GATC 5 cut(s) 43, 164, 610, 691, 1516
BspANI GGCC 4 cut(s) 179, 276, 503, 1442
BspCNI CTCAG 3 cut(s) 670, 1185, 1618
BspHI TCATGA 1 cut(s) 999
BspLI GGNNCC 2 cut(s) 98, 1383
BspMAI CTGCAG 1 cut(s) 268
BspMI ACCTGC 1 cut(s) 1707
BspPI GGATC 2 cut(s) 172, 699
BspT107I GGYRCC 1 cut(s) 1381
BspTNI GGTCTC 1 cut(s) 304
BsrI ACTGG 4 cut(s) 807, 1091, 1229, 1415
BssECI CCNNGG 1 cut(s) 100
BssMI GATC 5 cut(s) 43, 164, 610, 691, 1516
Bst2UI CCWGG 1 cut(s) 101
Bst4CI ACNGT 7 cut(s) 143, 238, 580, 710, 838, 1635, 1690
Bst6I CTCTTC 2 cut(s) 488, 812
BstBAI YACGTR 2 cut(s) 398, 640
BstC8I GCNNGC 1 cut(s) 95
BstDEI CTNAG 4 cut(s) 678, 739, 1193, 1605
BstENI CCTNNNNNAGG 1 cut(s) 198
BstF5I GGATG 8 cut(s) 224, 537, 556, 1063, 1102, 1188, 1632, 1687
BstHHI GCGC 1 cut(s) 828
BstKTI GATC 5 cut(s) 46, 167, 613, 694, 1519
BstMAI GTCTC 3 cut(s) 304, 748, 1563
BstMBI GATC 5 cut(s) 43, 164, 610, 691, 1516
BstMWI GCNNNNNNNGC 7 cut(s) 185, 582, 779, 840, 1120, 1212, 1691
BstNI CCWGG 1 cut(s) 101
BstNSI RCATGY 1 cut(s) 419
BstPAI GACNNNNGTC 1 cut(s) 924
BstSCI CCNGG 1 cut(s) 99
BstSFI CTRYAG 1 cut(s) 264
BstSLI GKGCMC 1 cut(s) 1139
BstV1I GCAGC 7 cut(s) 129, 132, 254, 810, 1173, 1325, 1366
BstV2I GAAGAC 3 cut(s) 23, 211, 902
BstX2I RGATCY 2 cut(s) 610, 691
BstXI CCANNNNNNTGG 1 cut(s) 1179
BstYI RGATCY 2 cut(s) 610, 691
BsuI GTATCC 2 cut(s) 1192, 1426
BsuRI GGCC 4 cut(s) 179, 276, 503, 1442
BtsCI GGATG 8 cut(s) 224, 537, 556, 1063, 1102, 1188, 1632, 1687
BtsI GCAGTG 2 cut(s) 273, 608
BtsIMutI CAGTG 3 cut(s) 273, 608, 1098
BveI ACCTGC 1 cut(s) 1707
Cac8I GCNNGC 1 cut(s) 95
CciI TCATGA 1 cut(s) 999
CfoI GCGC 1 cut(s) 828
Cfr13I GGNCC 4 cut(s) 147, 501, 580, 974
CpoI CGGWCCG 2 cut(s) 147, 580
CseI GACGC 1 cut(s) 1330
Csp6I GTAC 6 cut(s) 78, 362, 637, 876, 1411, 1597
CspI CGGWCCG 2 cut(s) 147, 580
CviAII CATG 3 cut(s) 347, 416, 1000
CviQI GTAC 6 cut(s) 78, 362, 637, 876, 1411, 1597
DdeI CTNAG 4 cut(s) 678, 739, 1193, 1605
DpnI GATC 5 cut(s) 45, 166, 612, 693, 1518
DpnII GATC 5 cut(s) 43, 164, 610, 691, 1516
DraIII CACNNNGTG 2 cut(s) 1134, 1396
EaeI YGGCCR 2 cut(s) 177, 274
Eam1104I CTCTTC 2 cut(s) 488, 812
EarI CTCTTC 2 cut(s) 488, 812
Eco31I GGTCTC 1 cut(s) 304
Eco47I GGWCC 3 cut(s) 147, 580, 974
Eco88I CYCGRG 1 cut(s) 1672
EcoNI CCTNNNNNAGG 1 cut(s) 198
EcoRI GAATTC 1 cut(s) 946
EcoRII CCWGG 1 cut(s) 99
EcoT22I ATGCAT 1 cut(s) 417
FaeI CATG 3 cut(s) 350, 419, 1003
FaqI GGGAC 1 cut(s) 688
FatI CATG 3 cut(s) 346, 415, 999
FauI CCCGC 2 cut(s) 874, 1469
FbaI TGATCA 1 cut(s) 43
FblI GTMKAC 1 cut(s) 861
FokI GGATG 8 cut(s) 211, 524, 543, 1070, 1109, 1195, 1639, 1694
FspI TGCGCA 1 cut(s) 827
GlaI GCGC 1 cut(s) 827
GsaI CCCAGC 3 cut(s) 303, 601, 816
GsuI CTGGAG 3 cut(s) 83, 705, 824
HaeIII GGCC 4 cut(s) 179, 276, 503, 1442
HapII CCGG 1 cut(s) 644
HgaI GACGC 1 cut(s) 1330
HhaI GCGC 1 cut(s) 828
Hin1II CATG 3 cut(s) 350, 419, 1003
Hin6I GCGC 1 cut(s) 826
HinP1I GCGC 1 cut(s) 826
HindIII AAGCTT 2 cut(s) 1422, 1585
HinfI GANTC 5 cut(s) 31, 248, 260, 338, 886
HpaII CCGG 1 cut(s) 644
HphI GGTGA 5 cut(s) 265, 850, 943, 1703, 1709
Hpy166II GTNNAC 5 cut(s) 385, 862, 1137, 1399, 1669
Hpy188I TCNGA 7 cut(s) 30, 48, 139, 147, 1231, 1608, 1615
Hpy188III TCNNGA 5 cut(s) 309, 722, 733, 1000, 1273
Hpy8I GTNNAC 5 cut(s) 385, 862, 1137, 1399, 1669
HpyAV CCTTC 6 cut(s) 78, 320, 1025, 1048, 1161, 1724
HpyCH4III ACNGT 7 cut(s) 143, 238, 580, 710, 838, 1635, 1690
HpyCH4IV ACGT 3 cut(s) 397, 639, 727
HpyCH4V TGCA 7 cut(s) 266, 415, 436, 1012, 1137, 1354, 1685
HpyF10VI GCNNNNNNNGC 7 cut(s) 185, 582, 779, 840, 1120, 1212, 1691
HpyF3I CTNAG 4 cut(s) 678, 739, 1193, 1605
HpySE526I ACGT 3 cut(s) 397, 639, 727
Hsp92II CATG 3 cut(s) 350, 419, 1003
HspAI GCGC 1 cut(s) 826
Ksp22I TGATCA 1 cut(s) 43
Kzo9I GATC 5 cut(s) 43, 164, 610, 691, 1516
LmnI GCTCC 2 cut(s) 102, 1737
Lsp1109I GCAGC 7 cut(s) 129, 132, 254, 810, 1173, 1325, 1366
LweI GCATC 6 cut(s) 233, 402, 704, 1173, 1672, 1719
MaeII ACGT 3 cut(s) 397, 639, 727
MalI GATC 5 cut(s) 45, 166, 612, 693, 1518
MboI GATC 5 cut(s) 43, 164, 610, 691, 1516
MfeI CAATTG 1 cut(s) 1542
MflI RGATCY 2 cut(s) 610, 691
MhlI GDGCHC 2 cut(s) 836, 1139
MlsI TGGCCA 1 cut(s) 276
MluCI AATT 8 cut(s) 55, 279, 473, 526, 946, 965, 1260, 1542
MluNI TGGCCA 1 cut(s) 276
MlyI GAGTC 1 cut(s) 25
MmeI TCCRAC 5 cut(s) 53, 125, 162, 252, 565
Mox20I TGGCCA 1 cut(s) 276
Mph1103I ATGCAT 1 cut(s) 417
MroXI GAANNNNTTC 1 cut(s) 342
MscI TGGCCA 1 cut(s) 276
MseI TTAA 4 cut(s) 534, 572, 981, 1368
MslI CAYNNNNRTG 2 cut(s) 420, 1177
Msp20I TGGCCA 1 cut(s) 276
MspA1I CMGCKG 3 cut(s) 245, 869, 1192
MspI CCGG 1 cut(s) 644
MspR9I CCNGG 1 cut(s) 101
MunI CAATTG 1 cut(s) 1542
MvaI CCWGG 1 cut(s) 101
MwoI GCNNNNNNNGC 7 cut(s) 185, 582, 779, 840, 1120, 1212, 1691
NdeII GATC 5 cut(s) 43, 164, 610, 691, 1516
NlaIII CATG 3 cut(s) 350, 419, 1003
NlaIV GGNNCC 2 cut(s) 98, 1383
NsbI TGCGCA 1 cut(s) 827
NsiI ATGCAT 1 cut(s) 417
NspI RCATGY 1 cut(s) 419
OliI CACNNNNGTG 1 cut(s) 1177
PagI TCATGA 1 cut(s) 999
PdmI GAANNNNTTC 1 cut(s) 342
PfeI GAWTC 4 cut(s) 248, 260, 338, 886
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
Ppu21I YACGTR 2 cut(s) 398, 640
PshAI GACNNNNGTC 1 cut(s) 924
Psp1406I AACGTT 1 cut(s) 727
Psp6I CCWGG 1 cut(s) 99
PspFI CCCAGC 3 cut(s) 299, 597, 812
PspGI CCWGG 1 cut(s) 99
PspN4I GGNNCC 2 cut(s) 98, 1383
PspPI GGNCC 4 cut(s) 147, 501, 580, 974
PstI CTGCAG 1 cut(s) 268
PsuI RGATCY 2 cut(s) 610, 691
RsaI GTAC 6 cut(s) 79, 363, 638, 877, 1412, 1598
RsaNI GTAC 6 cut(s) 78, 362, 637, 876, 1411, 1597
RseI CAYNNNNRTG 2 cut(s) 420, 1177
Rsr2I CGGWCCG 2 cut(s) 147, 580
RsrII CGGWCCG 2 cut(s) 147, 580
SaqAI TTAA 4 cut(s) 534, 572, 981, 1368
Sau3AI GATC 5 cut(s) 43, 164, 610, 691, 1516
Sau96I GGNCC 4 cut(s) 147, 501, 580, 974
SchI GAGTC 1 cut(s) 25
ScrFI CCNGG 1 cut(s) 101
SduI GDGCHC 2 cut(s) 836, 1139
SfaNI GCATC 6 cut(s) 233, 402, 704, 1173, 1672, 1719
SfcI CTRYAG 1 cut(s) 264
SinI GGWCC 3 cut(s) 147, 580, 974
SmiMI CAYNNNNRTG 2 cut(s) 420, 1177
SmlI CTYRAG 1 cut(s) 33
SmoI CTYRAG 1 cut(s) 33
Sse9I AATT 8 cut(s) 55, 279, 473, 526, 946, 965, 1260, 1542
StyD4I CCNGG 1 cut(s) 99
TaaI ACNGT 7 cut(s) 143, 238, 580, 710, 838, 1635, 1690
TaiI ACGT 3 cut(s) 400, 642, 730
TaqI TCGA 3 cut(s) 308, 515, 712
TasI AATT 8 cut(s) 55, 279, 473, 526, 946, 965, 1260, 1542
TatI WGTACW 2 cut(s) 875, 1596
TauI GCSGC 4 cut(s) 179, 773, 1114, 1192
TfiI GAWTC 4 cut(s) 248, 260, 338, 886
Tru1I TTAA 4 cut(s) 534, 572, 981, 1368
Tru9I TTAA 4 cut(s) 534, 572, 981, 1368
TscAI CASTG 3 cut(s) 273, 608, 1098
TseI GCWGC 7 cut(s) 117, 120, 242, 823, 1186, 1338, 1354
TspDTI ATGAA 9 cut(s) 198, 273, 335, 438, 448, 470, 520, 1268, 1694
TspGWI ACGGA 1 cut(s) 1627
TspRI CASTG 3 cut(s) 273, 608, 1098
VneI GTGCAC 1 cut(s) 1135
VpaK11BI GGWCC 3 cut(s) 147, 580, 974
XagI CCTNNNNNAGG 1 cut(s) 198
XapI RAATTY 4 cut(s) 55, 473, 946, 965
XceI RCATGY 1 cut(s) 419
XcmI CCANNNNNNNNNTGG 2 cut(s) 235, 1422
XmiI GTMKAC 1 cut(s) 861
XmnI GAANNNNTTC 1 cut(s) 342
Zsp2I ATGCAT 1 cut(s) 417
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.