Rh7DG271500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000269
Physical Location & Seq
Reverse (-)
29187329 .. 29190474
3146 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG271500.1

Sequence Viewer

Length: 2136 bp
ATGGCGGCCCCCAAACCAAGTAGCTCCACAACGATCTCTGATGGAGGCCCCCGAAAGAGTACTCGAATCGCCACCTCTAAAGCATTGGCTTCGGCGATGGTCTCTGAGGTCTCGAATCAAAATTCTCCAATTTTGGAGTCCACAAAGAAAGCTTCTGTTAACGGCACTGAAAAGGTGGTTGAGGTACCTAAACTGAAACCTACTTCCGATGAAGCGGTAATTGAGGCACCGAAACCTACTTCCGATGAACCAGTGGTTGAGGCAGAAACCTCCTTCCAATTATACGTGGTCATGAAAATAGAAGGCACCAGAGGATTTAGAGTTGTATGCCTCACCTGCCGAAGCCAAAGAGGTGAAGGATCGAAAGAAGTTCATCATGAAGAAGGAAGCCTCCGGTCGTTCCATGAGCTTTCTGAACTACCTTTTCGAGTTGAGATATCGCAAAAATGGAAAGAGCTTCCAGCTGAAGAGAAGGAGCAGTATGTAGTGACTGATCGATGTGGTCAGTCATCAGTTTCTGAGGAAGAGTTGCTTGAGTTGGTTCAGATTGATACCCACCCCAATGCATGTACTATAACTATGCACAAAAAGGAGATTGAAATGGATGCAAGTGACTTTGAAAATGTGATGGGGTTGAAGAATGTTGGGTCTGAGGTCGACTTTAAAGGTTCCACTAATGATCACCCTGAGTTGATGGCGATAATAAACTCCTTGTGTGGGAAGGACAAGAAGATAAGTTTAAGGGACGTGCAGAACTACCTGAAGGATACAGAAGAAGTTGGCAACAAGTTCAAGCGCCTGTTTGTGCTGTTCACAACGAGCACCATCCTTAGCCCATCTGCCTTACTGACGATACCAAAGAAATGGCTGCTGGCCCTGAAGGACACTCGCCTGATTAGCTCTTTAAACTGGGCTGATTACTCATTCAAATGTTTGATGGAGGCCATTGTCAGTTTCAAAAAAGACTCTCAGTCCTATTGTATCGGTTGTGTCCAGTTTCTGCAACTGCTCTATTTTGATTGTGTTTCACATGGGAAGACCATTGTGGACACGTCCTTGTACCCAGTTGAAGCTTTGGGGGACCATGAAATGGGCAAATTGCTCAAATGGGTGAACAAGCAAGGTGGTTTGTTGGATGAAAATGTTCTTGTGGCAAAGGTTGGTGACCGTGTTGGTAGTGGAGATCAGGCCAAAGCATATGGGGTGATTAATAAAGAAATGTCTGACTTGGCTGCTAAAGTGAATGGGGTGGAAAATAATATGTGCAATCTGAGAGATGATATGATGGGAAAGATGGACAAAGTCTTGAGTATGCTGAACACTCTGACTGCACAAAATGTGAATGTCAATCAGAACCTTCAAACTAATAGCTTAGCAGAAAAAGTAAGCCCCAAGAAAGTTTCAAAAAGAAAGCTGGAGAGCAGCAGGAGGTATGAAGTTATGAAGTTGTGGGCAGTAGTGTTACAGGTACATGGGGAAGACTTGCAACCAAAAAAGAAGACCTCCTTGATTTGCCTATCTGACTCAACATCTGTAGTCAGCCAACTGAAAAGTATGAAGAAAGTTTATGCCAACCCCACGACCAAGAGTAACATAGAGAAGATTGGTAACTTCAAAGTCAAGGGAGATCGGGAAGAGGCTGACAAAGGAGTGCTCAGGTTTGTTTATGATGTGTCGGCTGAAGAGAATGAGACCATTGTGGATAATGAAAACTTCTTCACTAGTCGAAAAGCAGTTTGGTCACTTAAACCTAACGGATGGGTTGAATATGATATTATCAATTTGTTTAGTGACTGTCTATTTCTAAGACGCTTCCTAAGCAATAGATGTTGTTACTTCACAACATACTTTTGTCAGAAGATGAAAAGTTACAATGACAGAGGCATGTGTGGAGATTTGGCTAGGGCAGTTTTGAAGGGTTTGGGTTTACAAACACTGGACATTATCTACCACCATGTGGAGTTCAAAGTCAAGAATGTTGTGAAGAAGTTTGCTGACTTCCATGTATTCGAGCCGGCTCAATGCCCTAAACAAGAGGGCGGTTCTGACTATGGGGTGTATGTGATCAAACACATGCAGTGTTATGGATCTGAGTGGTGGCATCAGGTATGTTTGTCATTTCTGCATGAGGTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMG_box

Protein Analysis

711

Amino Acids

79.93

Weight (kDa)

7.18

Isoelectric Point (pI)

33.32

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000269)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g29141 FvH4_1g29142 FvH4_2g04882 FvH4_2g04883 FvH4_2g07612 FvH4_3g26550 FvH4_3g26551 FvH4_3g31781 FvH4_3g31810 FvH4_3g31812 FvH4_4g08580 FvH4_4g08581 FvH4_4g08649 FvH4_4g08910 FvH4_4g10124 FvH4_4g10125 FvH4_4g28760 FvH4_5g16042 FvH4_5g24070 FvH4_5g30680 FvH4_5g37871 FvH4_5g37872 FvH4_7g03531 FvH4_7g12891 FvH4_7g12892 FvH4_7g12893
rosa_chinensis RchiOBHm_Chr7g0204351
rosa_laevigata RLG00000001882 RLG00000002339 RLG00000004189 RLG00000009211 RLG00000009212 RLG00000013650 RLG00000019919 RLG00000019920 RLG00000019921 RLG00000020177 RLG00000020178 RLG00000023368 RLG00000028208 RLG00000029086 RLG00000029688 RLG00000032551 RLG00000034335 RLG00000034807
rosa_multiflora Rmu_sc0000308.1_g000017 Rmu_sc0000308.1_g000018 Rmu_sc0003422.1_g000004 Rmu_sc0003776.1_g000026 Rmu_sc0005399.1_g000010 Rmu_sc0005399.1_g000012 Rmu_sc0009924.1_g000004
rosa_roxburghii Rroxscaffold_1G00053720 Rroxscaffold_1G00053730 Rroxscaffold_1G00054020 Rroxscaffold_2G00133470 Rroxscaffold_2G00133480 Rroxscaffold_3G00229920 Rroxscaffold_3G00229930 Rroxscaffold_3G00229940 Rroxscaffold_3G00245890 Rroxscaffold_3G00245900 Rroxscaffold_4G00317860 Rroxscaffold_5G00346620 Rroxscaffold_6G00396640 Rroxscaffold_6G00396930 Rroxscaffold_6G00396940 Rroxscaffold_6G00401510 Rroxscaffold_7G00201920 Rroxscaffold_7G00201930 Rroxscaffold_7G00201940
rosa_rugosa Rorug01G0116700 Rorug01G0116700 Rorug04G0072900 Rorug04G0073000 Rorug04G0112000 Rorug07G0258800
rosa_samantha Rh1AG123800 Rh1AG297000 Rh1DG057400 Rh1DG057500 Rh1DG129000 Rh2BG298000 Rh2BG471200 Rh2BG471300 Rh2BG471400 Rh2BG621400 Rh3CG245500 Rh3CG245600 Rh4DG157200 Rh4DG157300 Rh4DG157400 Rh4DG157500 Rh4DG157600 Rh4DG157700 Rh5DG402200 Rh6AG050900 Rh6AG051000 Rh6AG088400 Rh6AG088500 Rh6AG088600 Rh6AG088700 Rh6AG139800 Rh6AG139900 Rh6AG140000 Rh6CG077200 Rh6CG077300 Rh6CG077400 Rh6CG077500 Rh7CG225300 Rh7CG225400 Rh7CG225500 Rh7CG225600 Rh7CG267500 Rh7CG267600 Rh7CG267800 Rh7CG267900 Rh7CG338700 Rh7CG338800 Rh7CG338900 Rh7CG430900 Rh7CG431000 Rh7CG431100 Rh7DG219700 Rh7DG219800 Rh7DG219900 Rh7DG220000 Rh7DG257600 Rh7DG271500 Rh7DG367700 Rh7DG408600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 344
Acc36I ACCTGC 1 cut(s) 344
Acc65I GGTACC 1 cut(s) 184
AccB1I GGYRCC 3 cut(s) 184, 226, 305
AccB7I CCANNNNNTGG 2 cut(s) 1090, 1957
AccI GTMKAC 1 cut(s) 657
AciI CCGC 3 cut(s) 5, 215, 2040
AclWI GGATC 2 cut(s) 367, 2095
AcsI RAATTY 1 cut(s) 121
AcuI CTGAAG 4 cut(s) 486, 782, 899, 1701
AdeI CACNNNGTG 1 cut(s) 1957
AfaI GTAC 5 cut(s) 61, 186, 571, 1061, 1470
AfiI CCNNNNNNNGG 3 cut(s) 717, 1090, 1957
AflIII ACRYGT 1 cut(s) 1050
AhdI GACNNNNNGTC 1 cut(s) 970
AhlI ACTAGT 1 cut(s) 1721
AjiI CACGTC 2 cut(s) 748, 1053
AjuI GAANNNNNNNTTGG 2 cut(s) 1720, 1752
AluBI AGCT 9 cut(s) 24, 152, 409, 457, 464, 900, 1073, 1371, 1414
AluI AGCT 9 cut(s) 24, 152, 409, 457, 464, 900, 1073, 1371, 1414
Alw21I GWGCWC 2 cut(s) 824, 1656
Alw26I GTCTC 3 cut(s) 106, 115, 1685
AlwI GGATC 2 cut(s) 367, 2095
AlwNI CAGNNNCTG 2 cut(s) 518, 1000
AoxI GGCC 5 cut(s) 6, 46, 873, 942, 1188
ApeKI GCWGC 3 cut(s) 868, 1232, 1422
ApoI RAATTY 1 cut(s) 121
AseI ATTAAT 1 cut(s) 1209
Asp700I GAANNNNTTC 1 cut(s) 1143
Asp718I GGTACC 1 cut(s) 184
AspLEI GCGC 1 cut(s) 798
AspS9I GGNCC 4 cut(s) 7, 47, 874, 1081
AsuHPI GGTGA 6 cut(s) 325, 365, 674, 1123, 1175, 1216
AvaII GGWCC 1 cut(s) 1081
BanI GGYRCC 3 cut(s) 184, 226, 305
BbsI GAAGAC 3 cut(s) 1043, 1485, 1505
Bbv12I GWGCWC 2 cut(s) 824, 1656
BbvI GCAGC 3 cut(s) 855, 1219, 1434
BceAI ACGGC 1 cut(s) 178
BcgI CGANNNNNNTGC 2 cut(s) 72, 106
BciVI GTATCC 1 cut(s) 760
BclI TGATCA 2 cut(s) 679, 2064
BcoDI GTCTC 3 cut(s) 106, 115, 1685
BcuI ACTAGT 1 cut(s) 1721
BfaI CTAG 2 cut(s) 1722, 1902
BfmI CTRYAG 1 cut(s) 1533
BfoI RGCGCY 1 cut(s) 799
BfuAI ACCTGC 1 cut(s) 344
BfuI GTATCC 1 cut(s) 760
BisI GCNGC 4 cut(s) 6, 869, 1233, 1423
BlpI GCTNAGC 1 cut(s) 1372
BlsI GCNGC 4 cut(s) 7, 870, 1234, 1424
BmcAI AGTACT 1 cut(s) 61
Bme18I GGWCC 1 cut(s) 1081
BmeRI GACNNNNNGTC 1 cut(s) 970
BmgBI CACGTC 2 cut(s) 748, 1053
BmgT120I GGNCC 4 cut(s) 7, 47, 874, 1081
BmiI GGNNCC 7 cut(s) 9, 49, 186, 228, 307, 670, 1082
BmrI ACTGGG 2 cut(s) 919, 1058
BmsI GCATC 2 cut(s) 595, 2110
BmuI ACTGGG 2 cut(s) 919, 1058
BpiI GAAGAC 3 cut(s) 1043, 1485, 1505
BpmI CTGGAG 1 cut(s) 1436
Bpu10I CCTNAGC 3 cut(s) 830, 1655, 1817
Bpu1102I GCTNAGC 1 cut(s) 1372
BpuEI CTTGAG 2 cut(s) 554, 1327
Bsa29I ATCGAT 1 cut(s) 496
BsaAI YACGTR 1 cut(s) 286
BsaI GGTCTC 3 cut(s) 106, 115, 1685
BsaWI WCCGGW 1 cut(s) 393
Bsc4I CCNNNNNNNGG 3 cut(s) 717, 1090, 1957
Bse118I RCCGGY 1 cut(s) 2014
Bse1I ACTGG 5 cut(s) 251, 914, 994, 1064, 1941
BseCI ATCGAT 1 cut(s) 496
BseGI GGATG 4 cut(s) 610, 825, 1141, 1763
BseLI CCNNNNNNNGG 3 cut(s) 717, 1090, 1957
BseMII CTCAG 8 cut(s) 96, 510, 642, 678, 983, 1262, 1669, 2082
BseNI ACTGG 5 cut(s) 251, 914, 994, 1064, 1941
BseXI GCAGC 3 cut(s) 855, 1219, 1434
BsgI GTGCAG 2 cut(s) 770, 1314
Bsh1285I CGRYCG 1 cut(s) 398
BshFI GGCC 5 cut(s) 8, 48, 875, 944, 1190
BshNI GGYRCC 3 cut(s) 184, 226, 305
BshVI ATCGAT 1 cut(s) 496
BsiEI CGRYCG 1 cut(s) 398
BsiHKAI GWGCWC 2 cut(s) 824, 1656
BsiSI CCGG 2 cut(s) 394, 2015
BslFI GGGAC 2 cut(s) 758, 1094
BslI CCNNNNNNNGG 3 cut(s) 717, 1090, 1957
BsmAI GTCTC 3 cut(s) 106, 115, 1685
BsmFI GGGAC 2 cut(s) 758, 1094
BsnI GGCC 5 cut(s) 8, 48, 875, 944, 1190
Bso31I GGTCTC 3 cut(s) 106, 115, 1685
Bsp1286I GDGCHC 2 cut(s) 824, 1656
Bsp143I GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
Bsp1720I GCTNAGC 1 cut(s) 1372
BspACI CCGC 3 cut(s) 5, 215, 2040
BspANI GGCC 5 cut(s) 8, 48, 875, 944, 1190
BspCNI CTCAG 8 cut(s) 97, 511, 643, 679, 982, 1263, 1668, 2083
BspDI ATCGAT 1 cut(s) 496
BspHI TCATGA 2 cut(s) 291, 376
BspLI GGNNCC 7 cut(s) 9, 49, 186, 228, 307, 670, 1082
BspMI ACCTGC 1 cut(s) 344
BspPI GGATC 2 cut(s) 367, 2095
BspT107I GGYRCC 3 cut(s) 184, 226, 305
BspTNI GGTCTC 3 cut(s) 106, 115, 1685
BsrFI RCCGGY 1 cut(s) 2014
BsrI ACTGG 5 cut(s) 251, 914, 994, 1064, 1941
BssAI RCCGGY 1 cut(s) 2014
BssMI GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
Bst4CI ACNGT 2 cut(s) 1169, 1796
Bst6I CTCTTC 4 cut(s) 462, 519, 1629, 1677
BstBAI YACGTR 1 cut(s) 286
BstC8I GCNNGC 2 cut(s) 873, 2016
BstEII GGTNACC 1 cut(s) 1163
BstF5I GGATG 4 cut(s) 610, 825, 1141, 1763
BstH2I RGCGCY 1 cut(s) 799
BstHHI GCGC 1 cut(s) 798
BstKTI GATC 8 cut(s) 36, 362, 496, 682, 1186, 1630, 2067, 2090
BstMAI GTCTC 3 cut(s) 106, 115, 1685
BstMBI GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
BstMCI CGRYCG 1 cut(s) 398
BstMWI GCNNNNNNNGC 3 cut(s) 336, 897, 1818
BstNSI RCATGY 3 cut(s) 570, 1888, 2077
BstPI GGTNACC 1 cut(s) 1163
BstSFI CTRYAG 1 cut(s) 1533
BstV1I GCAGC 3 cut(s) 855, 1219, 1434
BstV2I GAAGAC 3 cut(s) 1043, 1485, 1505
BstX2I RGATCY 1 cut(s) 2087
BstXI CCANNNNNNTGG 1 cut(s) 864
BstYI RGATCY 1 cut(s) 2087
Bsu15I ATCGAT 1 cut(s) 496
BsuI GTATCC 1 cut(s) 760
BsuRI GGCC 5 cut(s) 8, 48, 875, 944, 1190
BsuTUI ATCGAT 1 cut(s) 496
BtgZI GCGATG 1 cut(s) 110
BtrI CACGTC 2 cut(s) 748, 1053
BtsCI GGATG 4 cut(s) 610, 825, 1141, 1763
BtsI GCAGTG 1 cut(s) 2084
BtsIMutI CAGTG 4 cut(s) 165, 258, 1934, 2084
BveI ACCTGC 1 cut(s) 344
Cac8I GCNNGC 2 cut(s) 873, 2016
CaiI CAGNNNCTG 2 cut(s) 518, 1000
CciI TCATGA 2 cut(s) 291, 376
CfoI GCGC 1 cut(s) 798
Cfr10I RCCGGY 1 cut(s) 2014
Cfr13I GGNCC 4 cut(s) 7, 47, 874, 1081
ClaI ATCGAT 1 cut(s) 496
CseI GACGC 1 cut(s) 1818
Csp6I GTAC 5 cut(s) 60, 185, 570, 1060, 1469
CspCI CAANNNNNGTGG 2 cut(s) 1105, 1140
CviQI GTAC 5 cut(s) 60, 185, 570, 1060, 1469
DpnI GATC 8 cut(s) 35, 361, 495, 681, 1185, 1629, 2066, 2089
DpnII GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
DraI TTTAAA 2 cut(s) 664, 906
DraIII CACNNNGTG 1 cut(s) 1957
DriI GACNNNNNGTC 1 cut(s) 970
Eam1104I CTCTTC 4 cut(s) 462, 519, 1629, 1677
Eam1105I GACNNNNNGTC 1 cut(s) 970
EarI CTCTTC 4 cut(s) 462, 519, 1629, 1677
Eco31I GGTCTC 3 cut(s) 106, 115, 1685
Eco32I GATATC 1 cut(s) 438
Eco47I GGWCC 1 cut(s) 1081
Eco57I CTGAAG 4 cut(s) 486, 782, 899, 1701
Eco91I GGTNACC 1 cut(s) 1163
EcoO109I RGGNCCY 1 cut(s) 47
EcoO65I GGTNACC 1 cut(s) 1163
EcoRV GATATC 1 cut(s) 438
EcoT22I ATGCAT 1 cut(s) 568
FalI AAGNNNNNCTT 4 cut(s) 516, 548, 1490, 1522
FaqI GGGAC 2 cut(s) 758, 1094
FauNDI CATATG 1 cut(s) 1198
FbaI TGATCA 2 cut(s) 679, 2064
FblI GTMKAC 1 cut(s) 657
Fnu4HI GCNGC 4 cut(s) 6, 869, 1233, 1423
FokI GGATG 4 cut(s) 617, 812, 1148, 1770
Fsp4HI GCNGC 4 cut(s) 6, 869, 1233, 1423
FspBI CTAG 2 cut(s) 1722, 1902
GlaI GCGC 1 cut(s) 797
GluI GCNGC 4 cut(s) 6, 869, 1233, 1423
GsuI CTGGAG 1 cut(s) 1436
HaeII RGCGCY 1 cut(s) 799
HaeIII GGCC 5 cut(s) 8, 48, 875, 944, 1190
HapII CCGG 2 cut(s) 394, 2015
HgaI GACGC 1 cut(s) 1818
HhaI GCGC 1 cut(s) 798
Hin6I GCGC 1 cut(s) 796
HinP1I GCGC 1 cut(s) 796
HincII GTYRAC 2 cut(s) 160, 658
HindII GTYRAC 2 cut(s) 160, 658
HindIII AAGCTT 2 cut(s) 150, 1071
HinfI GANTC 5 cut(s) 66, 115, 137, 965, 1523
HpaI GTTAAC 1 cut(s) 160
HpaII CCGG 2 cut(s) 394, 2015
HphI GGTGA 6 cut(s) 325, 365, 674, 1123, 1175, 1216
Hpy166II GTNNAC 7 cut(s) 141, 160, 658, 813, 1048, 1114, 1928
Hpy188III TCNNGA 6 cut(s) 112, 292, 377, 1306, 1631, 1972
Hpy8I GTNNAC 7 cut(s) 141, 160, 658, 813, 1048, 1114, 1928
HpyCH4III ACNGT 2 cut(s) 1169, 1796
HpyCH4IV ACGT 3 cut(s) 285, 747, 1052
HpyF10VI GCNNNNNNNGC 3 cut(s) 336, 897, 1818
HpySE526I ACGT 3 cut(s) 285, 747, 1052
HspAI GCGC 1 cut(s) 796
KpnI GGTACC 1 cut(s) 188
KroI GCCGGC 1 cut(s) 2014
KroNI GCCGGC 1 cut(s) 2016
Ksp22I TGATCA 2 cut(s) 679, 2064
KspAI GTTAAC 1 cut(s) 160
Kzo9I GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
LmnI GCTCC 2 cut(s) 29, 475
Lsp1109I GCAGC 3 cut(s) 855, 1219, 1434
LweI GCATC 2 cut(s) 595, 2110
MaeI CTAG 2 cut(s) 1722, 1902
MaeII ACGT 3 cut(s) 285, 747, 1052
MalI GATC 8 cut(s) 35, 361, 495, 681, 1185, 1629, 2066, 2089
MboI GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
MflI RGATCY 1 cut(s) 2087
MhlI GDGCHC 2 cut(s) 824, 1656
MluCI AATT 6 cut(s) 121, 129, 219, 278, 1097, 1780
MlyI GAGTC 3 cut(s) 146, 959, 1517
MmeI TCCRAC 1 cut(s) 1113
Mph1103I ATGCAT 1 cut(s) 568
MroNI GCCGGC 1 cut(s) 2014
MroXI GAANNNNTTC 1 cut(s) 1143
MseI TTAA 6 cut(s) 159, 663, 740, 905, 1209, 1746
MslI CAYNNNNRTG 2 cut(s) 561, 928
MspA1I CMGCKG 1 cut(s) 464
MspI CCGG 2 cut(s) 394, 2015
MwoI GCNNNNNNNGC 3 cut(s) 336, 897, 1818
NaeI GCCGGC 1 cut(s) 2016
NdeI CATATG 1 cut(s) 1198
NdeII GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
NgoMIV GCCGGC 1 cut(s) 2014
NlaIV GGNNCC 7 cut(s) 9, 49, 186, 228, 307, 670, 1082
NmuCI GTSAC 5 cut(s) 487, 611, 1163, 1740, 1790
NsiI ATGCAT 1 cut(s) 568
NspI RCATGY 3 cut(s) 570, 1888, 2077
PagI TCATGA 2 cut(s) 291, 376
PaqCI CACCTGC 1 cut(s) 344
PdiI GCCGGC 1 cut(s) 2016
PdmI GAANNNNTTC 1 cut(s) 1143
PfeI GAWTC 2 cut(s) 66, 115
PflFI GACNNNGTC 1 cut(s) 1301
PflMI CCANNNNNTGG 2 cut(s) 1090, 1957
PkrI GCNGC 4 cut(s) 7, 870, 1234, 1424
PleI GAGTC 3 cut(s) 145, 959, 1517
PpsI GAGTC 3 cut(s) 145, 959, 1517
Ppu21I YACGTR 1 cut(s) 286
PshBI ATTAAT 1 cut(s) 1209
PspEI GGTNACC 1 cut(s) 1163
PspN4I GGNNCC 7 cut(s) 9, 49, 186, 228, 307, 670, 1082
PspPI GGNCC 4 cut(s) 7, 47, 874, 1081
PstNI CAGNNNCTG 2 cut(s) 518, 1000
PsuI RGATCY 1 cut(s) 2087
PsyI GACNNNGTC 1 cut(s) 1301
PvuII CAGCTG 1 cut(s) 464
RsaI GTAC 5 cut(s) 61, 186, 571, 1061, 1470
RsaNI GTAC 5 cut(s) 60, 185, 570, 1060, 1469
RseI CAYNNNNRTG 2 cut(s) 561, 928
SalI GTCGAC 1 cut(s) 656
SaqAI TTAA 6 cut(s) 159, 663, 740, 905, 1209, 1746
SatI GCNGC 4 cut(s) 6, 869, 1233, 1423
Sau3AI GATC 8 cut(s) 33, 359, 493, 679, 1183, 1627, 2064, 2087
Sau96I GGNCC 4 cut(s) 7, 47, 874, 1081
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 3 cut(s) 146, 959, 1517
SduI GDGCHC 2 cut(s) 824, 1656
SfaNI GCATC 2 cut(s) 595, 2110
SfcI CTRYAG 1 cut(s) 1533
SinI GGWCC 1 cut(s) 1081
SmiMI CAYNNNNRTG 2 cut(s) 561, 928
SmlI CTYRAG 2 cut(s) 533, 1306
SmoI CTYRAG 2 cut(s) 533, 1306
SpeI ACTAGT 1 cut(s) 1721
Sse9I AATT 6 cut(s) 121, 129, 219, 278, 1097, 1780
SsiI CCGC 3 cut(s) 5, 215, 2040
SspMI CTAG 2 cut(s) 1722, 1902
TaaI ACNGT 2 cut(s) 1169, 1796
TaiI ACGT 3 cut(s) 288, 750, 1055
TaqI TCGA 8 cut(s) 64, 113, 362, 427, 496, 657, 1726, 2010
TasI AATT 6 cut(s) 121, 129, 219, 278, 1097, 1780
TatI WGTACW 2 cut(s) 59, 569
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 2 cut(s) 66, 115
Tru1I TTAA 6 cut(s) 159, 663, 740, 905, 1209, 1746
Tru9I TTAA 6 cut(s) 159, 663, 740, 905, 1209, 1746
TscAI CASTG 4 cut(s) 172, 258, 1941, 2084
TseFI GTSAC 5 cut(s) 487, 611, 1163, 1740, 1790
TseI GCWGC 3 cut(s) 868, 1232, 1422
Tsp45I GTSAC 5 cut(s) 487, 611, 1163, 1740, 1790
TspGWI ACGGA 1 cut(s) 1770
TspRI CASTG 4 cut(s) 172, 258, 1941, 2084
Tth111I GACNNNGTC 1 cut(s) 1301
Van91I CCANNNNNTGG 2 cut(s) 1090, 1957
VpaK11BI GGWCC 1 cut(s) 1081
VspI ATTAAT 1 cut(s) 1209
XapI RAATTY 1 cut(s) 121
XceI RCATGY 3 cut(s) 570, 1888, 2077
XmiI GTMKAC 1 cut(s) 657
XmnI GAANNNNTTC 1 cut(s) 1143
XspI CTAG 2 cut(s) 1722, 1902
ZrmI AGTACT 1 cut(s) 61
Zsp2I ATGCAT 1 cut(s) 568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.