FvH4_5g29160

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000155
Physical Location & Seq
Reverse (-)
20223375 .. 20227461
4087 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g29160.t3

Sequence Viewer

Length: 1530 bp
ATGGAGCGCCATCATAAGGCTTTGGCAACTACAAGTCATCAATCTCAAGGTGCTGGCAGTTACAGTTTAGTTGACAGATTTAGTAGTCTTCCTGATGCGGTTGTTTCTCACATTCTTTCATACCTCAATGCATTCGATCTCATTCAAGTGAGCAGTGTGTCCAAAAAATGTGGGGAACTAAGTGTTTCAGTCTCGGGATTAGACTTTGATGTAAATGCAATGCCTGGAGGGAAAGTCTGGTGGATGCGATCAAAACTGTTGAATTATTTGGATAGGCTCTGGATGCGACGCGAGAATATCAACATAGATAGGTTCCGTGTCTGTTGGGTTTTTGAAGGAGTGACTTCACGTACCTGTGAGGAGCATTGTCGAGTGATCTCATGGATCTATGCTGCTGTGAGGTGCAATGTTGAAAAGTTAGATCTTCAGATCACTCTGAACTACAAAGAGAAACCTACAAGTTTAGAGTTGCCAGGTTGCACCTTCCGTTGTGCATCTTTGACGTCCCTAACACTAGACTTGAAGTTCTGTATTCTTAAAACTCCCTCAGTCTCCAGTTGCACTAATCTCCAATCCTTACTGTTAAGAAGTGTTTGCATAGAGAAGGATTTTTTTGAATGGATCTCAAGTTCGTGCCAATGCATCAAGGAGTTAACCATTGACTGTGTTCTTAGTTCGACAATTATCTGCATTGAGATTCCATCTTTGGAATTCATTCATTTCGTGTTTGTGGGTAGGCGTCAACTATACACAGACATTGATGCTCTTAGCATTTCTGGTGAAAATCTCCAACATATACATGTTGAGCATATTGACTTGAGATCATCAGCTTGTCACTATAAATTAAGTATTACGGCTCCAAATGTGAAGTATTTGAAATTAAATGGGAATGTCGCTCATCGTCTATCTGTGGAAAAATTCATACATTCAGAAGAAGCTGTGATTTTTCTTAATCCGGGGGAAGGTGGATTTGACAAGGTGGTATTTGATGTGGTTAGCTGTATACTTGGGGTTAAAGTTCTTCGTTTGAACGCAACGACCATAAAGGCTCTGTTCAAATATGAGGGATCCATGCTCGGACAATTTGACAATATCCGTCAGCTCTATATCCATACCAAGGGTTTGGAGAAAGACCTAATTGCGGCAGTGGTTTCTCTTCTAAGTGGAATGCCTACTTTGAGTTCTTTAAACATAAAGTCTGAGCCAAATAACAGGCAATTAAAATGTGTGGAACCAACTAGTGTATCTGTGGGTAAAAAGTGGAGAGCCCAAAGAATGGCTTGTATTGACCAACTTAAGGAGGTGACAATAGAGATTTCCAATGGGAACAAGGAATTGGAGTTGGCAAGATTCTTGTTGGAGGATGCTAAGAATTTGAAGAAGATGGTCTTACAGTTGAGTGACTGGTCATACTCTCCAAAGAAAGTATTGCTAGCAAGGAAGTTGTCGTCGTATTCATCAAATCTTAATATGGCAGCAAACATAGACCATATCAATTCTACTGCCACAATTGTCTTTGAGGCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

510

Amino Acids

57.25

Weight (kDa)

8.44

Isoelectric Point (pI)

48.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 27 - 63 4.7e-07 F-box domain
LRR_At5g56370 PF24758 127 - 309 2.8e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 506
AccB7I CCANNNNNTGG 1 cut(s) 1276
AccI GTMKAC 1 cut(s) 1003
AccII CGCG 1 cut(s) 291
AciI CCGC 2 cut(s) 98, 1142
AclWI GGATC 4 cut(s) 392, 629, 1062, 1075
AcsI RAATTY 3 cut(s) 710, 917, 1372
AcuI CTGAAG 1 cut(s) 410
AcyI GRCGYC 2 cut(s) 503, 739
AfaI GTAC 1 cut(s) 352
AfiI CCNNNNNNNGG 6 cut(s) 16, 962, 1117, 1141, 1276, 1297
AflII CTTAAG 1 cut(s) 1295
AflIII ACRYGT 1 cut(s) 799
AhlI ACTAGT 1 cut(s) 1238
AjnI CCWGG 2 cut(s) 223, 472
AjuI GAANNNNNNNTTGG 2 cut(s) 1319, 1351
AloI GAACNNNNNNTCC 2 cut(s) 613, 645
AluBI AGCT 4 cut(s) 830, 938, 999, 1102
AluI AGCT 4 cut(s) 830, 938, 999, 1102
Alw26I GTCTC 2 cut(s) 196, 556
AlwI GGATC 4 cut(s) 392, 629, 1062, 1075
Ama87I CYCGRG 1 cut(s) 193
ApeKI GCWGC 3 cut(s) 392, 1475, 1523
ApoI RAATTY 3 cut(s) 710, 917, 1372
Asp700I GAANNNNTTC 1 cut(s) 714
AspLEI GCGC 1 cut(s) 9
AsuC2I CCSGG 1 cut(s) 957
AsuHPI GGTGA 2 cut(s) 791, 1315
AsuNHI GCTAGC 1 cut(s) 1432
AvaI CYCGRG 1 cut(s) 193
BaeI ACNNNNGTAYC 2 cut(s) 1227, 1260
BamHI GGATCC 1 cut(s) 1067
BanII GRGCYC 1 cut(s) 1270
BbsI GAAGAC 1 cut(s) 80
BbvI GCAGC 3 cut(s) 379, 1487, 1510
BccI CCATC 3 cut(s) 18, 709, 1378
BceAI ACGGC 1 cut(s) 870
BciT130I CCWGG 2 cut(s) 225, 474
BcnI CCSGG 1 cut(s) 957
BcoDI GTCTC 2 cut(s) 196, 556
BcuI ACTAGT 1 cut(s) 1238
BfaI CTAG 3 cut(s) 515, 1239, 1433
BfoI RGCGCY 1 cut(s) 10
BfrI CTTAAG 1 cut(s) 1295
BglII AGATCT 1 cut(s) 421
BisI GCNGC 4 cut(s) 393, 1143, 1476, 1524
BlsI GCNGC 4 cut(s) 394, 1144, 1477, 1525
Bme1390I CCNGG 3 cut(s) 225, 474, 957
BmeT110I CYCGRG 1 cut(s) 193
BmiI GGNNCC 4 cut(s) 314, 858, 1069, 1233
BmrFI CCNGG 3 cut(s) 225, 474, 957
BmsI GCATC 7 cut(s) 85, 234, 273, 503, 651, 751, 1354
BmtI GCTAGC 1 cut(s) 1436
BpiI GAAGAC 1 cut(s) 80
BpmI CTGGAG 2 cut(s) 246, 538
BpuEI CTTGAG 3 cut(s) 30, 610, 838
BpuMI CCSGG 1 cut(s) 957
BsaAI YACGTR 1 cut(s) 350
BsaHI GRCGYC 2 cut(s) 503, 739
BsaJI CCNNGG 2 cut(s) 956, 1116
BsaXI ACNNNNNCTCC 2 cut(s) 219, 249
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 962, 1117, 1141, 1276, 1297
Bse1I ACTGG 2 cut(s) 555, 1409
Bse3DI GCAATG 2 cut(s) 225, 412
BseBI CCWGG 2 cut(s) 225, 474
BseDI CCNNGG 2 cut(s) 956, 1116
BseGI GGATG 3 cut(s) 249, 288, 1369
BseLI CCNNNNNNNGG 6 cut(s) 16, 962, 1117, 1141, 1276, 1297
BseMI GCAATG 2 cut(s) 225, 412
BseMII CTCAG 2 cut(s) 561, 1191
BseNI ACTGG 2 cut(s) 555, 1409
BseRI GAGGAG 1 cut(s) 374
BseXI GCAGC 3 cut(s) 379, 1487, 1510
Bsh1236I CGCG 1 cut(s) 291
BsiHKCI CYCGRG 1 cut(s) 193
BsiSI CCGG 1 cut(s) 956
BslFI GGGAC 1 cut(s) 490
BslI CCNNNNNNNGG 6 cut(s) 16, 962, 1117, 1141, 1276, 1297
BsmAI GTCTC 2 cut(s) 196, 556
BsmFI GGGAC 1 cut(s) 490
BsmI GAATGC 2 cut(s) 131, 1173
BsoBI CYCGRG 1 cut(s) 193
Bsp1286I GDGCHC 1 cut(s) 1270
Bsp143I GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
BspACI CCGC 2 cut(s) 98, 1142
BspCNI CTCAG 2 cut(s) 560, 1192
BspFNI CGCG 1 cut(s) 291
BspLI GGNNCC 4 cut(s) 314, 858, 1069, 1233
BspOI GCTAGC 1 cut(s) 1436
BspPI GGATC 4 cut(s) 392, 629, 1062, 1075
BspTI CTTAAG 1 cut(s) 1295
BsrDI GCAATG 2 cut(s) 225, 412
BsrI ACTGG 2 cut(s) 555, 1409
BssECI CCNNGG 2 cut(s) 956, 1116
BssMI GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
BssNAI GTATAC 1 cut(s) 1004
BssNI GRCGYC 2 cut(s) 503, 739
BssT1I CCWWGG 1 cut(s) 1116
Bst1107I GTATAC 1 cut(s) 1004
Bst2UI CCWGG 2 cut(s) 225, 474
Bst4CI ACNGT 5 cut(s) 65, 258, 582, 665, 1395
Bst6I CTCTTC 1 cut(s) 1161
BstACI GRCGYC 2 cut(s) 503, 739
BstAFI CTTAAG 1 cut(s) 1295
BstBAI YACGTR 1 cut(s) 350
BstC8I GCNNGC 2 cut(s) 55, 1434
BstDEI CTNAG 7 cut(s) 179, 547, 671, 767, 1160, 1200, 1368
BstF5I GGATG 3 cut(s) 249, 288, 1369
BstFNI CGCG 1 cut(s) 291
BstH2I RGCGCY 1 cut(s) 10
BstHHI GCGC 1 cut(s) 9
BstKTI GATC 9 cut(s) 139, 251, 378, 387, 424, 432, 624, 824, 1070
BstMAI GTCTC 2 cut(s) 196, 556
BstMBI GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
BstMWI GCNNNNNNNGC 1 cut(s) 283
BstNI CCWGG 2 cut(s) 225, 474
BstNSI RCATGY 1 cut(s) 803
BstSCI CCNGG 3 cut(s) 223, 472, 955
BstUI CGCG 1 cut(s) 291
BstV1I GCAGC 3 cut(s) 379, 1487, 1510
BstV2I GAAGAC 1 cut(s) 80
BstX2I RGATCY 4 cut(s) 384, 421, 621, 1067
BstXI CCANNNNNNTGG 1 cut(s) 1123
BstYI RGATCY 4 cut(s) 384, 421, 621, 1067
BstZ17I GTATAC 1 cut(s) 1004
BtsCI GGATG 3 cut(s) 249, 288, 1369
BtsI GCAGTG 2 cut(s) 160, 1152
BtsIMutI CAGTG 2 cut(s) 160, 1152
Cac8I GCNNGC 2 cut(s) 55, 1434
CfoI GCGC 1 cut(s) 9
CseI GACGC 2 cut(s) 297, 728
Csp6I GTAC 1 cut(s) 351
CspCI CAANNNNNGTGG 2 cut(s) 151, 186
CviAII CATG 3 cut(s) 381, 800, 1072
CviQI GTAC 1 cut(s) 351
DdeI CTNAG 7 cut(s) 179, 547, 671, 767, 1160, 1200, 1368
DpnI GATC 9 cut(s) 138, 250, 377, 386, 423, 431, 623, 823, 1069
DpnII GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
DraI TTTAAA 1 cut(s) 1188
Eam1104I CTCTTC 1 cut(s) 1161
EarI CTCTTC 1 cut(s) 1161
Eco130I CCWWGG 1 cut(s) 1116
Eco24I GRGCYC 1 cut(s) 1270
Eco57I CTGAAG 1 cut(s) 410
Eco88I CYCGRG 1 cut(s) 193
EcoRI GAATTC 1 cut(s) 710
EcoRII CCWGG 2 cut(s) 223, 472
EcoT14I CCWWGG 1 cut(s) 1116
EcoT22I ATGCAT 2 cut(s) 133, 644
EcoT38I GRGCYC 1 cut(s) 1270
ErhI CCWWGG 1 cut(s) 1116
FaeI CATG 3 cut(s) 384, 803, 1075
FalI AAGNNNNNCTT 4 cut(s) 1264, 1296, 1373, 1405
FaqI GGGAC 1 cut(s) 490
FatI CATG 3 cut(s) 380, 799, 1071
FblI GTMKAC 1 cut(s) 1003
Fnu4HI GCNGC 4 cut(s) 393, 1143, 1476, 1524
FokI GGATG 3 cut(s) 256, 295, 1376
FriOI GRGCYC 1 cut(s) 1270
Fsp4HI GCNGC 4 cut(s) 393, 1143, 1476, 1524
FspBI CTAG 3 cut(s) 515, 1239, 1433
GlaI GCGC 1 cut(s) 8
GluI GCNGC 4 cut(s) 393, 1143, 1476, 1524
GsuI CTGGAG 2 cut(s) 246, 538
HaeII RGCGCY 1 cut(s) 10
HapII CCGG 1 cut(s) 956
HgaI GACGC 2 cut(s) 297, 728
HhaI GCGC 1 cut(s) 9
Hin1I GRCGYC 2 cut(s) 503, 739
Hin1II CATG 3 cut(s) 384, 803, 1075
Hin6I GCGC 1 cut(s) 7
HinP1I GCGC 1 cut(s) 7
HincII GTYRAC 3 cut(s) 73, 654, 743
HindII GTYRAC 3 cut(s) 73, 654, 743
HinfI GANTC 2 cut(s) 697, 1350
HpaI GTTAAC 1 cut(s) 654
HpaII CCGG 1 cut(s) 956
HphI GGTGA 2 cut(s) 791, 1315
Hpy166II GTNNAC 4 cut(s) 73, 654, 743, 1004
Hpy188I TCNGA 5 cut(s) 429, 438, 931, 1079, 1201
Hpy188III TCNNGA 3 cut(s) 92, 195, 280
Hpy8I GTNNAC 4 cut(s) 73, 654, 743, 1004
Hpy99I CGWCG 2 cut(s) 291, 1453
HpyAV CCTTC 4 cut(s) 329, 493, 598, 956
HpyCH4III ACNGT 5 cut(s) 65, 258, 582, 665, 1395
HpyCH4IV ACGT 2 cut(s) 349, 503
HpyCH4V TGCA 9 cut(s) 131, 218, 405, 480, 494, 561, 597, 642, 690
HpyF10VI GCNNNNNNNGC 1 cut(s) 283
HpyF3I CTNAG 7 cut(s) 179, 547, 671, 767, 1160, 1200, 1368
HpySE526I ACGT 2 cut(s) 349, 503
Hsp92I GRCGYC 2 cut(s) 503, 739
Hsp92II CATG 3 cut(s) 384, 803, 1075
HspAI GCGC 1 cut(s) 7
KspAI GTTAAC 1 cut(s) 654
Kzo9I GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
LmnI GCTCC 3 cut(s) 4, 361, 862
Lsp1109I GCAGC 3 cut(s) 379, 1487, 1510
LweI GCATC 7 cut(s) 85, 234, 273, 503, 651, 751, 1354
MaeI CTAG 3 cut(s) 515, 1239, 1433
MaeII ACGT 2 cut(s) 349, 503
MaeIII GTNAC 5 cut(s) 59, 340, 833, 1303, 1400
MalI GATC 9 cut(s) 138, 250, 377, 386, 423, 431, 623, 823, 1069
MboI GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
MboII GAAGA 7 cut(s) 80, 416, 944, 1013, 1148, 1390, 1393
MfeI CAATTG 1 cut(s) 1509
MflI RGATCY 4 cut(s) 384, 421, 621, 1067
MhlI GDGCHC 1 cut(s) 1270
MmeI TCCRAC 2 cut(s) 814, 1338
MnlI CCTC 9 cut(s) 134, 221, 352, 393, 556, 1057, 1294, 1354, 1513
Mph1103I ATGCAT 2 cut(s) 133, 644
MroXI GAANNNNTTC 1 cut(s) 714
MslI CAYNNNNRTG 2 cut(s) 146, 798
MspCI CTTAAG 1 cut(s) 1295
MspI CCGG 1 cut(s) 956
MspR9I CCNGG 3 cut(s) 225, 474, 957
MunI CAATTG 1 cut(s) 1509
Mva1269I GAATGC 2 cut(s) 131, 1173
MvaI CCWGG 2 cut(s) 225, 474
MvnI CGCG 1 cut(s) 291
MwoI GCNNNNNNNGC 1 cut(s) 283
NciI CCSGG 1 cut(s) 957
NdeII GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
NheI GCTAGC 1 cut(s) 1432
NlaIII CATG 3 cut(s) 384, 803, 1075
NlaIV GGNNCC 4 cut(s) 314, 858, 1069, 1233
NmuCI GTSAC 4 cut(s) 340, 833, 1303, 1400
NsiI ATGCAT 2 cut(s) 133, 644
NspI RCATGY 1 cut(s) 803
PciI ACATGT 1 cut(s) 799
PctI GAATGC 2 cut(s) 131, 1173
PdmI GAANNNNTTC 1 cut(s) 714
PfeI GAWTC 2 cut(s) 697, 1350
PflMI CCANNNNNTGG 1 cut(s) 1276
PkrI GCNGC 4 cut(s) 394, 1144, 1477, 1525
Ppu21I YACGTR 1 cut(s) 350
PscI ACATGT 1 cut(s) 799
Psp6I CCWGG 2 cut(s) 223, 472
PspGI CCWGG 2 cut(s) 223, 472
PspN4I GGNNCC 4 cut(s) 314, 858, 1069, 1233
PsuI RGATCY 4 cut(s) 384, 421, 621, 1067
RsaI GTAC 1 cut(s) 352
RsaNI GTAC 1 cut(s) 351
RseI CAYNNNNRTG 2 cut(s) 146, 798
SatI GCNGC 4 cut(s) 393, 1143, 1476, 1524
Sau3AI GATC 9 cut(s) 136, 248, 375, 384, 421, 429, 621, 821, 1067
ScrFI CCNGG 3 cut(s) 225, 474, 957
SduI GDGCHC 1 cut(s) 1270
SfaNI GCATC 7 cut(s) 85, 234, 273, 503, 651, 751, 1354
SmiMI CAYNNNNRTG 2 cut(s) 146, 798
SmlI CTYRAG 4 cut(s) 45, 625, 817, 1295
SmoI CTYRAG 4 cut(s) 45, 625, 817, 1295
SpeI ACTAGT 1 cut(s) 1238
SsiI CCGC 2 cut(s) 98, 1142
SspMI CTAG 3 cut(s) 515, 1239, 1433
StyD4I CCNGG 3 cut(s) 223, 472, 955
StyI CCWWGG 1 cut(s) 1116
TaaI ACNGT 5 cut(s) 65, 258, 582, 665, 1395
TaiI ACGT 2 cut(s) 352, 506
TaqI TCGA 3 cut(s) 135, 370, 677
TauI GCSGC 1 cut(s) 1145
TfiI GAWTC 2 cut(s) 697, 1350
TscAI CASTG 2 cut(s) 160, 1152
TseFI GTSAC 4 cut(s) 340, 833, 1303, 1400
TseI GCWGC 3 cut(s) 392, 1475, 1523
Tsp45I GTSAC 4 cut(s) 340, 833, 1303, 1400
TspDTI ATGAA 5 cut(s) 108, 703, 707, 910, 1446
TspGWI ACGGA 3 cut(s) 305, 476, 1085
TspRI CASTG 2 cut(s) 160, 1152
Van91I CCANNNNNTGG 1 cut(s) 1276
Vha464I CTTAAG 1 cut(s) 1295
XapI RAATTY 3 cut(s) 710, 917, 1372
XceI RCATGY 1 cut(s) 803
XmiI GTMKAC 1 cut(s) 1003
XmnI GAANNNNTTC 1 cut(s) 714
XspI CTAG 3 cut(s) 515, 1239, 1433
ZraI GACGTC 1 cut(s) 504
Zsp2I ATGCAT 2 cut(s) 133, 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.