Rh3BG216000

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
OG0000155
Physical Location & Seq
Forward (+)
19554504 .. 19557526
3023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG216000.1

Sequence Viewer

Length: 1593 bp
ATGAAAAACAAACCGAGAACCCTGGAGAGTTTCAGTGATCTTCCTGACCAAGTTGCTCATCACATTCTTTCCTTTCTCACCATAAGAGACTTAACTCGGTTCGGTTCCACGTCCAAAAAATGCCGGGAGCTTTACCTATCAGCTCCATCATTGAACTTTAAGGTAGATGCCTCCTCTCGAAGATTCATGACCAAGCGAGCTAAGTTGCTCAACTCTGTGGAAAGGTACTTGCTTCAACGTGGTAATAATCCAATACTCTGCTTTCGCGTTTCTTGGGTTTTCCATGAAAGTGAAAGGGCAAGGTTGTGTGATGAGCAGTTCCGATTCGTCTCGTGGATCCAGAATGCTGTAAGGTGCAATGTCGAAGTAATCCAACTAGTTTTTGATCAAAGTCACACTGCAGTCCTGCCAGTCCGTAAGTTCCCATTGCCCTCATGCATCTGGATTTCTACTTCTCTGAGGTCCCTAGTGGTAGTCTCAAGTTTTGTGATTATTCAAGTGCCCTCCTTTTCTTTCTCATGTAAACTCTATTCCTTAAAGTTGAGAGGCGTAATAATAGAAGACGAGAATTTTTGCAAATGGATCTCATGTTCTTGCAAATGTCTTGAGGAATTATCGCTTGAAAATGTTCGTGGCGAAGGTTTGAAAAATTTTACTATTGAAAGCTCCTCTTTGCAATCGATCAGTTTGTTGAATAGTGGATTCTGCCATGTCAATGTCTTATGTGAGAAACTGGAAGATCTATATGTAAATTGCAGAATTTATTCTAGTGGGACATCGATGAATATTTCTGCTCCAAATCTCAAACACTTGAGGTGGTGGGGAAATTTGATGAATCATCTAAATGTTGGAAATTTAATGCGTTTAGAAAAAGTTGAGCTTTTTCTATCCCCTAAAGTAGATGACTTTGACAGCCTATTGGAGGTTCTTTCTGGTATTCGCAGGACTAAAGTTCTTATTCTAGATGGGAACACTATGGCTATGTTCAAGGAAGGTTCCATGCCATTACCATTAGATGAGATTAGTAATTTGGGCATTCATATTTACAGCTTGAAAGATGTCCTAGTCCCGGCAATGGTCTCTCTTCTCAGAGGAATGACTAATTTGAATACTCTCTGGATAACATCTGCCAATTTGCCAACCTATATGCACTTCCCTAAGGTTGATGCATCTTTGTTCAATATGGGTTTTTGGATATCACAAAGGCTTGCTTTAGTTTCTCAACTTAGGGAGGTGAGAATAGAGCTTGCAAATTATGGGACTAATGAGTTTGAGTTAGCAAGAAAAAGAGGCTTATCCCCTAAAGTAGATGACTTTGACAGCCTATTGGAGGTTCTTTCTGGTATCCGCAGGACTAAAGTTTTTAATCTTGATGGGATGACTATGAAGGCTGTGTTCAATGAAGGTTCCATGTCATTACCATTAGATGAGATTAGTAATTTGGGCATTCATATTTACAGCTTGGATGATGACCTAGTCCCGGCAATGGTCTCTCTTATCAGAGGAATGACTAATTTGAATACTCTCTGGATAACATCTGCCAGTTTGCCAGCCTATATGCGCTATTCTAAGGTTGATGTAAGTAATAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

530

Amino Acids

60.31

Weight (kDa)

8.69

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 44 8.6e-06 F-box domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 1 cut(s) 267
AciI CCGC 1 cut(s) 1348
AclWI GGATC 3 cut(s) 331, 344, 590
AcsI RAATTY 5 cut(s) 568, 649, 759, 826, 853
AfaI GTAC 1 cut(s) 227
AfiI CCNNNNNNNGG 6 cut(s) 922, 1069, 1075, 1330, 1480, 1486
AhlI ACTAGT 1 cut(s) 376
AjiI CACGTC 1 cut(s) 111
AjnI CCWGG 1 cut(s) 21
AloI GAACNNNNNNTCC 2 cut(s) 574, 606
AluBI AGCT 8 cut(s) 130, 143, 200, 666, 880, 1050, 1246, 1461
AluI AGCT 8 cut(s) 130, 143, 200, 666, 880, 1050, 1246, 1461
Alw26I GTCTC 5 cut(s) 81, 334, 481, 1084, 1495
AlwI GGATC 3 cut(s) 331, 344, 590
ApoI RAATTY 5 cut(s) 568, 649, 759, 826, 853
Asp700I GAANNNNTTC 2 cut(s) 627, 763
AspLEI GCGC 1 cut(s) 1563
AspS9I GGNCC 1 cut(s) 462
AsuC2I CCSGG 3 cut(s) 125, 1070, 1481
AsuHPI GGTGA 2 cut(s) 70, 1246
AvaII GGWCC 1 cut(s) 462
AxyI CCTNAGG 1 cut(s) 1158
BaeGI GKGCMC 1 cut(s) 504
BamHI GGATCC 1 cut(s) 336
BauI CACGAG 1 cut(s) 331
BbsI GAAGAC 1 cut(s) 567
BccI CCATC 3 cut(s) 154, 959, 1367
BciT130I CCWGG 1 cut(s) 23
BciVI GTATCC 1 cut(s) 1355
BclI TGATCA 1 cut(s) 385
BcnI CCSGG 3 cut(s) 125, 1070, 1481
BcoDI GTCTC 5 cut(s) 81, 334, 481, 1084, 1495
BcuI ACTAGT 1 cut(s) 376
BfaI CTAG 7 cut(s) 377, 467, 768, 962, 1064, 1475, 1591
BfmI CTRYAG 1 cut(s) 399
BfuI GTATCC 1 cut(s) 1355
BglII AGATCT 1 cut(s) 739
Bme1390I CCNGG 4 cut(s) 23, 125, 1070, 1481
Bme18I GGWCC 1 cut(s) 462
BmgBI CACGTC 1 cut(s) 111
BmgT120I GGNCC 1 cut(s) 462
BmiI GGNNCC 5 cut(s) 106, 338, 464, 997, 1408
BmrFI CCNGG 4 cut(s) 23, 125, 1070, 1481
BmsI GCATC 4 cut(s) 157, 447, 1156, 1178
BpiI GAAGAC 1 cut(s) 567
BpmI CTGGAG 1 cut(s) 44
BpuEI CTTGAG 3 cut(s) 463, 626, 832
BpuMI CCSGG 3 cut(s) 125, 1070, 1481
Bsa29I ATCGAT 2 cut(s) 680, 779
BsaI GGTCTC 2 cut(s) 1084, 1495
BsaJI CCNNGG 1 cut(s) 21
Bsc4I CCNNNNNNNGG 6 cut(s) 922, 1069, 1075, 1330, 1480, 1486
Bse1I ACTGG 3 cut(s) 410, 738, 1542
Bse21I CCTNAGG 1 cut(s) 1158
Bse3DI GCAATG 4 cut(s) 364, 425, 1080, 1491
BseBI CCWGG 1 cut(s) 23
BseCI ATCGAT 2 cut(s) 680, 779
BseDI CCNNGG 1 cut(s) 21
BseGI GGATG 2 cut(s) 1383, 1471
BseLI CCNNNNNNNGG 6 cut(s) 922, 1069, 1075, 1330, 1480, 1486
BseMI GCAATG 4 cut(s) 364, 425, 1080, 1491
BseMII CTCAG 2 cut(s) 449, 1102
BseNI ACTGG 3 cut(s) 410, 738, 1542
BseRI GAGGAG 2 cut(s) 163, 658
BseSI GKGCMC 1 cut(s) 504
Bsh1236I CGCG 1 cut(s) 267
BshVI ATCGAT 2 cut(s) 680, 779
BsiSI CCGG 3 cut(s) 124, 1070, 1481
BslFI GGGAC 5 cut(s) 448, 787, 1052, 1273, 1463
BslI CCNNNNNNNGG 6 cut(s) 922, 1069, 1075, 1330, 1480, 1486
BsmAI GTCTC 5 cut(s) 81, 334, 481, 1084, 1495
BsmBI CGTCTC 1 cut(s) 334
BsmFI GGGAC 5 cut(s) 448, 787, 1052, 1273, 1463
BsmI GAATGC 3 cut(s) 349, 1035, 1446
Bso31I GGTCTC 2 cut(s) 1084, 1495
Bsp1286I GDGCHC 1 cut(s) 504
Bsp143I GATC 6 cut(s) 37, 336, 385, 582, 681, 739
BspACI CCGC 1 cut(s) 1348
BspCNI CTCAG 2 cut(s) 450, 1101
BspDI ATCGAT 2 cut(s) 680, 779
BspFNI CGCG 1 cut(s) 267
BspHI TCATGA 1 cut(s) 186
BspLI GGNNCC 5 cut(s) 106, 338, 464, 997, 1408
BspMAI CTGCAG 1 cut(s) 403
BspPI GGATC 3 cut(s) 331, 344, 590
BspTNI GGTCTC 2 cut(s) 1084, 1495
BsrDI GCAATG 4 cut(s) 364, 425, 1080, 1491
BsrI ACTGG 3 cut(s) 410, 738, 1542
BssECI CCNNGG 1 cut(s) 21
BssMI GATC 6 cut(s) 37, 336, 385, 582, 681, 739
BssSI CACGAG 1 cut(s) 331
Bst2BI CACGAG 1 cut(s) 331
Bst2UI CCWGG 1 cut(s) 23
Bst6I CTCTTC 1 cut(s) 1089
BstC8I GCNNGC 4 cut(s) 198, 1209, 1248, 1551
BstDEI CTNAG 6 cut(s) 201, 458, 1088, 1158, 1226, 1569
BstENI CCTNNNNNAGG 2 cut(s) 920, 1328
BstF5I GGATG 2 cut(s) 1383, 1471
BstFNI CGCG 1 cut(s) 267
BstHHI GCGC 1 cut(s) 1563
BstKTI GATC 6 cut(s) 40, 339, 388, 585, 684, 742
BstMAI GTCTC 5 cut(s) 81, 334, 481, 1084, 1495
BstMBI GATC 6 cut(s) 37, 336, 385, 582, 681, 739
BstNI CCWGG 1 cut(s) 23
BstSCI CCNGG 4 cut(s) 21, 123, 1068, 1479
BstSFI CTRYAG 1 cut(s) 399
BstSLI GKGCMC 1 cut(s) 504
BstUI CGCG 1 cut(s) 267
BstV2I GAAGAC 1 cut(s) 567
BstX2I RGATCY 3 cut(s) 336, 582, 739
BstYI RGATCY 3 cut(s) 336, 582, 739
Bsu15I ATCGAT 2 cut(s) 680, 779
Bsu36I CCTNAGG 1 cut(s) 1158
BsuI GTATCC 1 cut(s) 1355
BsuTUI ATCGAT 2 cut(s) 680, 779
BtrI CACGTC 1 cut(s) 111
BtsCI GGATG 2 cut(s) 1383, 1471
BtsI GCAGTG 1 cut(s) 396
BtsIMutI CAGTG 2 cut(s) 40, 396
Cac8I GCNNGC 4 cut(s) 198, 1209, 1248, 1551
CciI TCATGA 1 cut(s) 186
CfoI GCGC 1 cut(s) 1563
Cfr13I GGNCC 1 cut(s) 462
ClaI ATCGAT 2 cut(s) 680, 779
Csp6I GTAC 1 cut(s) 226
CviAII CATG 8 cut(s) 187, 284, 435, 519, 588, 710, 1000, 1411
CviQI GTAC 1 cut(s) 226
DdeI CTNAG 6 cut(s) 201, 458, 1088, 1158, 1226, 1569
DpnI GATC 6 cut(s) 39, 338, 387, 584, 683, 741
DpnII GATC 6 cut(s) 37, 336, 385, 582, 681, 739
Eam1104I CTCTTC 1 cut(s) 1089
EarI CTCTTC 1 cut(s) 1089
Eco31I GGTCTC 2 cut(s) 1084, 1495
Eco32I GATATC 1 cut(s) 1197
Eco47I GGWCC 1 cut(s) 462
Eco81I CCTNAGG 1 cut(s) 1158
EcoNI CCTNNNNNAGG 2 cut(s) 920, 1328
EcoO109I RGGNCCY 1 cut(s) 462
EcoRII CCWGG 1 cut(s) 21
EcoRV GATATC 1 cut(s) 1197
EcoT22I ATGCAT 2 cut(s) 440, 1171
Esp3I CGTCTC 1 cut(s) 334
FaeI CATG 8 cut(s) 190, 287, 438, 522, 591, 713, 1003, 1414
FalI AAGNNNNNCTT 6 cut(s) 655, 687, 864, 896, 1195, 1227
FaqI GGGAC 5 cut(s) 448, 787, 1052, 1273, 1463
FatI CATG 8 cut(s) 186, 283, 434, 518, 587, 709, 999, 1410
FbaI TGATCA 1 cut(s) 385
FokI GGATG 2 cut(s) 1390, 1478
FspBI CTAG 7 cut(s) 377, 467, 768, 962, 1064, 1475, 1591
GlaI GCGC 1 cut(s) 1562
GsuI CTGGAG 1 cut(s) 44
HapII CCGG 3 cut(s) 124, 1070, 1481
HhaI GCGC 1 cut(s) 1563
Hin1II CATG 8 cut(s) 190, 287, 438, 522, 591, 713, 1003, 1414
Hin6I GCGC 1 cut(s) 1561
HinP1I GCGC 1 cut(s) 1561
HinfI GANTC 4 cut(s) 183, 324, 702, 835
HpaII CCGG 3 cut(s) 124, 1070, 1481
HphI GGTGA 2 cut(s) 70, 1246
Hpy166II GTNNAC 1 cut(s) 524
Hpy188I TCNGA 4 cut(s) 323, 459, 1091, 1502
Hpy8I GTNNAC 1 cut(s) 524
HpyAV CCTTC 4 cut(s) 632, 986, 1381, 1397
HpyCH4IV ACGT 2 cut(s) 110, 238
HpyF3I CTNAG 6 cut(s) 201, 458, 1088, 1158, 1226, 1569
HpySE526I ACGT 2 cut(s) 110, 238
Hsp92II CATG 8 cut(s) 190, 287, 438, 522, 591, 713, 1003, 1414
HspAI GCGC 1 cut(s) 1561
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 6 cut(s) 37, 336, 385, 582, 681, 739
LmnI GCTCC 4 cut(s) 127, 148, 671, 799
LweI GCATC 4 cut(s) 157, 447, 1156, 1178
MaeI CTAG 7 cut(s) 377, 467, 768, 962, 1064, 1475, 1591
MaeII ACGT 2 cut(s) 110, 238
MaeIII GTNAC 1 cut(s) 392
MalI GATC 6 cut(s) 39, 338, 387, 584, 683, 741
MboI GATC 6 cut(s) 37, 336, 385, 582, 681, 739
MboII GAAGA 5 cut(s) 32, 192, 572, 749, 1076
MflI RGATCY 3 cut(s) 336, 582, 739
MhlI GDGCHC 1 cut(s) 504
MmeI TCCRAC 2 cut(s) 397, 829
Mph1103I ATGCAT 2 cut(s) 440, 1171
MroXI GAANNNNTTC 2 cut(s) 627, 763
MseI TTAA 5 cut(s) 92, 159, 536, 857, 1365
MslI CAYNNNNRTG 3 cut(s) 288, 714, 843
MspI CCGG 3 cut(s) 124, 1070, 1481
MspR9I CCNGG 4 cut(s) 23, 125, 1070, 1481
Mva1269I GAATGC 3 cut(s) 349, 1035, 1446
MvaI CCWGG 1 cut(s) 23
MvnI CGCG 1 cut(s) 267
NciI CCSGG 3 cut(s) 125, 1070, 1481
NdeII GATC 6 cut(s) 37, 336, 385, 582, 681, 739
NlaIII CATG 8 cut(s) 190, 287, 438, 522, 591, 713, 1003, 1414
NlaIV GGNNCC 5 cut(s) 106, 338, 464, 997, 1408
NmuCI GTSAC 1 cut(s) 392
NsiI ATGCAT 2 cut(s) 440, 1171
PagI TCATGA 1 cut(s) 186
PctI GAATGC 3 cut(s) 349, 1035, 1446
PdmI GAANNNNTTC 2 cut(s) 627, 763
PfeI GAWTC 4 cut(s) 183, 324, 702, 835
PflFI GACNNNGTC 1 cut(s) 1475
PpuMI RGGWCCY 1 cut(s) 462
Psp5II RGGWCCY 1 cut(s) 462
Psp6I CCWGG 1 cut(s) 21
PspGI CCWGG 1 cut(s) 21
PspN4I GGNNCC 5 cut(s) 106, 338, 464, 997, 1408
PspPI GGNCC 1 cut(s) 462
PspPPI RGGWCCY 1 cut(s) 462
PstI CTGCAG 1 cut(s) 403
PsuI RGATCY 3 cut(s) 336, 582, 739
PsyI GACNNNGTC 1 cut(s) 1475
RsaI GTAC 1 cut(s) 227
RsaNI GTAC 1 cut(s) 226
RseI CAYNNNNRTG 3 cut(s) 288, 714, 843
SaqAI TTAA 5 cut(s) 92, 159, 536, 857, 1365
Sau3AI GATC 6 cut(s) 37, 336, 385, 582, 681, 739
Sau96I GGNCC 1 cut(s) 462
ScrFI CCNGG 4 cut(s) 23, 125, 1070, 1481
SduI GDGCHC 1 cut(s) 504
SfaNI GCATC 4 cut(s) 157, 447, 1156, 1178
SfcI CTRYAG 1 cut(s) 399
SinI GGWCC 1 cut(s) 462
SmiMI CAYNNNNRTG 3 cut(s) 288, 714, 843
SmlI CTYRAG 3 cut(s) 478, 605, 811
SmoI CTYRAG 3 cut(s) 478, 605, 811
SpeI ACTAGT 1 cut(s) 376
SsiI CCGC 1 cut(s) 1348
SspI AATATT 1 cut(s) 787
SspMI CTAG 7 cut(s) 377, 467, 768, 962, 1064, 1475, 1591
StyD4I CCNGG 4 cut(s) 21, 123, 1068, 1479
TaiI ACGT 2 cut(s) 113, 241
TaqI TCGA 4 cut(s) 178, 363, 680, 779
TfiI GAWTC 4 cut(s) 183, 324, 702, 835
Tru1I TTAA 5 cut(s) 92, 159, 536, 857, 1365
Tru9I TTAA 5 cut(s) 92, 159, 536, 857, 1365
TscAI CASTG 2 cut(s) 40, 403
TseFI GTSAC 1 cut(s) 392
Tsp45I GTSAC 1 cut(s) 392
TspDTI ATGAA 9 cut(s) 17, 175, 300, 797, 848, 1028, 1400, 1416, 1439
TspGWI ACGGA 1 cut(s) 404
TspRI CASTG 2 cut(s) 40, 403
Tth111I GACNNNGTC 1 cut(s) 1475
VpaK11BI GGWCC 1 cut(s) 462
XagI CCTNNNNNAGG 2 cut(s) 920, 1328
XapI RAATTY 5 cut(s) 568, 649, 759, 826, 853
XbaI TCTAGA 1 cut(s) 961
XmnI GAANNNNTTC 2 cut(s) 627, 763
XspI CTAG 7 cut(s) 377, 467, 768, 962, 1064, 1475, 1591
Zsp2I ATGCAT 2 cut(s) 440, 1171
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.