LRR-repeat protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 97 | 8.6e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 180 - 350 | 4.6e-35 | NB-ARC domain |
| NACHT | PF05729 | 199 - 340 | 1.4e-06 | NACHT domain |
| WHD_DRP | PF23559 | 436 - 510 | 1.9e-23 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 528 - 800 | 8.2e-32 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 645 - 769 | 4.9e-36 | R13L1/DRL21 LRRs |
| LRR_RPS2 | PF23247 | 925 - 1049 | 7.4e-07 | Plant disease resistance protein RPS2-like, leucine-rich repeats |
| LRR_14 | PF23598 | 930 - 1172 | 2.7e-11 | Leucine-rich repeat region |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1761 |
| Acc65I | GGTACC | 1 cut(s) | 4100 |
| AccB1I | GGYRCC | 3 cut(s) | 2174, 3951, 4100 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2264 |
| AccBSI | CCGCTC | 3 cut(s) | 62, 3412, 3780 |
| AccI | GTMKAC | 2 cut(s) | 2080, 3382 |
| AciI | CCGC | 9 cut(s) | 60, 161, 946, 1963, 2132, 3177, 3343, 3410, 3780 |
| AclWI | GGATC | 2 cut(s) | 1055, 3220 |
| AcoI | YGGCCR | 2 cut(s) | 600, 2266 |
| AcyI | GRCGYC | 1 cut(s) | 268 |
| AfaI | GTAC | 8 cut(s) | 653, 777, 1122, 2262, 2774, 2815, 3223, 4102 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 271, 735, 1405, 1963, 2264, 3113, 3349, 4114 |
| AflIII | ACRYGT | 3 cut(s) | 1534, 1618, 1993 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1972 |
| AjiI | CACGTC | 1 cut(s) | 3186 |
| AjnI | CCWGG | 2 cut(s) | 27, 1398 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 620, 652 |
| Alw21I | GWGCWC | 2 cut(s) | 2542, 3465 |
| AlwI | GGATC | 2 cut(s) | 1055, 3220 |
| Ama87I | CYCGRG | 1 cut(s) | 487 |
| AoxI | GGCC | 7 cut(s) | 600, 2266, 2917, 3115, 3524, 3781, 3791 |
| ApeKI | GCWGC | 9 cut(s) | 23, 425, 446, 770, 2125, 2592, 2778, 3345, 4054 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 662, 694 |
| AseI | ATTAAT | 1 cut(s) | 3509 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 2112, 3552 |
| Asp718I | GGTACC | 1 cut(s) | 4100 |
| AspS9I | GGNCC | 2 cut(s) | 1345, 3782 |
| AsuC2I | CCSGG | 1 cut(s) | 2469 |
| AsuHPI | GGTGA | 6 cut(s) | 125, 208, 553, 1925, 3470, 3706 |
| AsuII | TTCGAA | 1 cut(s) | 717 |
| AvaI | CYCGRG | 1 cut(s) | 487 |
| AvaII | GGWCC | 1 cut(s) | 1345 |
| AxyI | CCTNAGG | 2 cut(s) | 2315, 4000 |
| BalI | TGGCCA | 2 cut(s) | 602, 2268 |
| BanI | GGYRCC | 3 cut(s) | 2174, 3951, 4100 |
| BanII | GRGCYC | 1 cut(s) | 3465 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 963, 995 |
| BbsI | GAAGAC | 4 cut(s) | 635, 2387, 3152, 3935 |
| Bbv12I | GWGCWC | 2 cut(s) | 2542, 3465 |
| BbvI | GCAGC | 9 cut(s) | 10, 412, 458, 757, 2112, 2604, 2765, 3357, 4041 |
| BceAI | ACGGC | 3 cut(s) | 2185, 3130, 3190 |
| BciT130I | CCWGG | 2 cut(s) | 29, 1400 |
| BclI | TGATCA | 6 cut(s) | 558, 888, 2347, 2514, 3973, 4075 |
| BcnI | CCSGG | 1 cut(s) | 2469 |
| BfaI | CTAG | 8 cut(s) | 429, 623, 2438, 2544, 2858, 2891, 3152, 3305 |
| BfmI | CTRYAG | 3 cut(s) | 771, 783, 1754 |
| BfuAI | ACCTGC | 1 cut(s) | 1761 |
| BglII | AGATCT | 1 cut(s) | 3798 |
| BmcAI | AGTACT | 2 cut(s) | 2262, 2774 |
| Bme1390I | CCNGG | 3 cut(s) | 29, 1400, 2469 |
| Bme18I | GGWCC | 1 cut(s) | 1345 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1972 |
| BmeT110I | CYCGRG | 1 cut(s) | 487 |
| BmgBI | CACGTC | 1 cut(s) | 3186 |
| BmgT120I | GGNCC | 2 cut(s) | 1345, 3782 |
| BmiI | GGNNCC | 4 cut(s) | 2176, 3953, 4006, 4102 |
| BmrFI | CCNGG | 3 cut(s) | 29, 1400, 2469 |
| BmrI | ACTGGG | 2 cut(s) | 2252, 3381 |
| BmsI | GCATC | 8 cut(s) | 139, 433, 1494, 3413, 3647, 3744, 3755, 3836 |
| BmuI | ACTGGG | 2 cut(s) | 2252, 3381 |
| BoxI | GACNNNNGTC | 1 cut(s) | 3939 |
| BpiI | GAAGAC | 4 cut(s) | 635, 2387, 3152, 3935 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 2524, 2556, 2885, 2917 |
| BpmI | CTGGAG | 3 cut(s) | 1421, 2741, 3900 |
| Bpu10I | CCTNAGC | 1 cut(s) | 3528 |
| Bpu14I | TTCGAA | 1 cut(s) | 717 |
| BpuMI | CCSGG | 1 cut(s) | 2469 |
| BsaAI | YACGTR | 2 cut(s) | 1619, 2999 |
| BsaBI | GATNNNNATC | 2 cut(s) | 1180, 3734 |
| BsaHI | GRCGYC | 1 cut(s) | 268 |
| BsaI | GGTCTC | 1 cut(s) | 3641 |
| BsaJI | CCNNGG | 6 cut(s) | 27, 983, 1480, 2761, 3208, 3947 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 168, 198, 521, 551, 2244, 2274 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 271, 735, 1405, 1963, 2264, 3113, 3349, 4114 |
| Bse1I | ACTGG | 9 cut(s) | 1049, 1927, 2258, 2527, 2967, 3387, 3731, 3883, 3904 |
| Bse21I | CCTNAGG | 2 cut(s) | 2315, 4000 |
| Bse3DI | GCAATG | 4 cut(s) | 119, 1554, 2411, 2626 |
| Bse8I | GATNNNNATC | 2 cut(s) | 1180, 3734 |
| BseBI | CCWGG | 2 cut(s) | 29, 1400 |
| BseDI | CCNNGG | 6 cut(s) | 27, 983, 1480, 2761, 3208, 3947 |
| BseJI | GATNNNNATC | 2 cut(s) | 1180, 3734 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 271, 735, 1405, 1963, 2264, 3113, 3349, 4114 |
| BseMI | GCAATG | 4 cut(s) | 119, 1554, 2411, 2626 |
| BseMII | CTCAG | 7 cut(s) | 453, 2025, 2066, 2322, 2813, 3746, 4014 |
| BseNI | ACTGG | 9 cut(s) | 1049, 1927, 2258, 2527, 2967, 3387, 3731, 3883, 3904 |
| BseRI | GAGGAG | 4 cut(s) | 1931, 2438, 2516, 3788 |
| BseXI | GCAGC | 9 cut(s) | 10, 412, 458, 757, 2112, 2604, 2765, 3357, 4041 |
| BseYI | CCCAGC | 2 cut(s) | 109, 1859 |
| Bsh1285I | CGRYCG | 2 cut(s) | 2795, 3111 |
| BshFI | GGCC | 7 cut(s) | 602, 2268, 2919, 3117, 3526, 3783, 3793 |
| BshNI | GGYRCC | 3 cut(s) | 2174, 3951, 4100 |
| BsiEI | CGRYCG | 2 cut(s) | 2795, 3111 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2542, 3465 |
| BsiHKCI | CYCGRG | 1 cut(s) | 487 |
| BsiSI | CCGG | 3 cut(s) | 265, 2469, 2681 |
| BslFI | GGGAC | 5 cut(s) | 1435, 1979, 2240, 3172, 3732 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 271, 735, 1405, 1963, 2264, 3113, 3349, 4114 |
| BsmBI | CGTCTC | 2 cut(s) | 2562, 3271 |
| BsmFI | GGGAC | 5 cut(s) | 1435, 1979, 2240, 3172, 3732 |
| BsmI | GAATGC | 1 cut(s) | 2134 |
| BsnI | GGCC | 7 cut(s) | 602, 2268, 2919, 3117, 3526, 3783, 3793 |
| Bso31I | GGTCTC | 1 cut(s) | 3641 |
| BsoBI | CYCGRG | 1 cut(s) | 487 |
| Bsp119I | TTCGAA | 1 cut(s) | 717 |
| Bsp1286I | GDGCHC | 2 cut(s) | 2542, 3465 |
| Bsp19I | CCATGG | 3 cut(s) | 1480, 2761, 3208 |
| BspACI | CCGC | 9 cut(s) | 60, 161, 946, 1963, 2132, 3177, 3343, 3410, 3780 |
| BspANI | GGCC | 7 cut(s) | 602, 2268, 2919, 3117, 3526, 3783, 3793 |
| BspCNI | CTCAG | 7 cut(s) | 452, 2026, 2067, 2323, 2814, 3747, 4013 |
| BspLI | GGNNCC | 4 cut(s) | 2176, 3953, 4006, 4102 |
| BspMAI | CTGCAG | 2 cut(s) | 775, 1758 |
| BspMI | ACCTGC | 1 cut(s) | 1761 |
| BspPI | GGATC | 2 cut(s) | 1055, 3220 |
| BspQI | GCTCTTC | 2 cut(s) | 3425, 3817 |
| BspT104I | TTCGAA | 1 cut(s) | 717 |
| BspT107I | GGYRCC | 3 cut(s) | 2174, 3951, 4100 |
| BspTNI | GGTCTC | 1 cut(s) | 3641 |
| BsrBI | CCGCTC | 3 cut(s) | 62, 3412, 3780 |
| BsrDI | GCAATG | 4 cut(s) | 119, 1554, 2411, 2626 |
| BsrI | ACTGG | 9 cut(s) | 1049, 1927, 2258, 2527, 2967, 3387, 3731, 3883, 3904 |
| BssECI | CCNNGG | 6 cut(s) | 27, 983, 1480, 2761, 3208, 3947 |
| BssNI | GRCGYC | 1 cut(s) | 268 |
| BssT1I | CCWWGG | 4 cut(s) | 1480, 2761, 3208, 3947 |
| Bst2UI | CCWGG | 2 cut(s) | 29, 1400 |
| Bst4CI | ACNGT | 4 cut(s) | 2888, 2915, 2954, 3076 |
| Bst6I | CTCTTC | 9 cut(s) | 984, 1384, 1779, 2793, 3108, 3258, 3276, 3425, 3817 |
| BstACI | GRCGYC | 1 cut(s) | 268 |
| BstBAI | YACGTR | 2 cut(s) | 1619, 2999 |
| BstBI | TTCGAA | 1 cut(s) | 717 |
| BstC8I | GCNNGC | 2 cut(s) | 2597, 3636 |
| BstDSI | CCRYGG | 3 cut(s) | 1480, 2761, 3208 |
| BstMCI | CGRYCG | 2 cut(s) | 2795, 3111 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 265, 2021, 2030, 2131, 4063 |
| BstNI | CCWGG | 2 cut(s) | 29, 1400 |
| BstNSI | RCATGY | 5 cut(s) | 770, 1997, 2599, 2692, 2982 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 3939 |
| BstSCI | CCNGG | 3 cut(s) | 27, 1398, 2467 |
| BstSFI | CTRYAG | 3 cut(s) | 771, 783, 1754 |
| BstV1I | GCAGC | 9 cut(s) | 10, 412, 458, 757, 2112, 2604, 2765, 3357, 4041 |
| BstV2I | GAAGAC | 4 cut(s) | 635, 2387, 3152, 3935 |
| BstX2I | RGATCY | 2 cut(s) | 3212, 3798 |
| BstYI | RGATCY | 2 cut(s) | 3212, 3798 |
| Bsu36I | CCTNAGG | 2 cut(s) | 2315, 4000 |
| BsuRI | GGCC | 7 cut(s) | 602, 2268, 2919, 3117, 3526, 3783, 3793 |
| BtgI | CCRYGG | 3 cut(s) | 1480, 2761, 3208 |
| BtgZI | GCGATG | 1 cut(s) | 2976 |
| BtrI | CACGTC | 1 cut(s) | 3186 |
| BtsI | GCAGTG | 2 cut(s) | 197, 955 |
| BtsIMutI | CAGTG | 4 cut(s) | 197, 909, 955, 3394 |
| BveI | ACCTGC | 1 cut(s) | 1761 |
| Cac8I | GCNNGC | 2 cut(s) | 2597, 3636 |
| Cfr13I | GGNCC | 2 cut(s) | 1345, 3782 |
| CseI | GACGC | 2 cut(s) | 257, 4029 |
| Csp6I | GTAC | 8 cut(s) | 652, 776, 1121, 2261, 2773, 2814, 3222, 4101 |
| CviQI | GTAC | 8 cut(s) | 652, 776, 1121, 2261, 2773, 2814, 3222, 4101 |
| DraI | TTTAAA | 1 cut(s) | 496 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1972 |
| EaeI | YGGCCR | 2 cut(s) | 600, 2266 |
| Eam1104I | CTCTTC | 9 cut(s) | 984, 1384, 1779, 2793, 3108, 3258, 3276, 3425, 3817 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1972 |
| EarI | CTCTTC | 9 cut(s) | 984, 1384, 1779, 2793, 3108, 3258, 3276, 3425, 3817 |
| Ecl136II | GAGCTC | 1 cut(s) | 3463 |
| Eco130I | CCWWGG | 4 cut(s) | 1480, 2761, 3208, 3947 |
| Eco24I | GRGCYC | 1 cut(s) | 3465 |
| Eco31I | GGTCTC | 1 cut(s) | 3641 |
| Eco32I | GATATC | 2 cut(s) | 742, 3817 |
| Eco47I | GGWCC | 1 cut(s) | 1345 |
| Eco53kI | GAGCTC | 1 cut(s) | 3463 |
| Eco81I | CCTNAGG | 2 cut(s) | 2315, 4000 |
| Eco88I | CYCGRG | 1 cut(s) | 487 |
| EcoICRI | GAGCTC | 1 cut(s) | 3463 |
| EcoRII | CCWGG | 2 cut(s) | 27, 1398 |
| EcoRV | GATATC | 2 cut(s) | 742, 3817 |
| EcoT14I | CCWWGG | 4 cut(s) | 1480, 2761, 3208, 3947 |
| EcoT22I | ATGCAT | 1 cut(s) | 3770 |
| EcoT38I | GRGCYC | 1 cut(s) | 3465 |
| ErhI | CCWWGG | 4 cut(s) | 1480, 2761, 3208, 3947 |
| Esp3I | CGTCTC | 2 cut(s) | 2562, 3271 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1356, 1388, 2100, 2132 |
| FaqI | GGGAC | 5 cut(s) | 1435, 1979, 2240, 3172, 3732 |
| FauI | CCCGC | 3 cut(s) | 953, 1956, 3417 |
| FbaI | TGATCA | 6 cut(s) | 558, 888, 2347, 2514, 3973, 4075 |
| FblI | GTMKAC | 2 cut(s) | 2080, 3382 |
| FriOI | GRGCYC | 1 cut(s) | 3465 |
| FspBI | CTAG | 8 cut(s) | 429, 623, 2438, 2544, 2858, 2891, 3152, 3305 |
| GsaI | CCCAGC | 2 cut(s) | 113, 1863 |
| GsuI | CTGGAG | 3 cut(s) | 1421, 2741, 3900 |
| HaeIII | GGCC | 7 cut(s) | 602, 2268, 2919, 3117, 3526, 3783, 3793 |
| HapII | CCGG | 3 cut(s) | 265, 2469, 2681 |
| HgaI | GACGC | 2 cut(s) | 257, 4029 |
| Hin1I | GRCGYC | 1 cut(s) | 268 |
| HincII | GTYRAC | 5 cut(s) | 1742, 2058, 2508, 2745, 4125 |
| HindII | GTYRAC | 5 cut(s) | 1742, 2058, 2508, 2745, 4125 |
| HindIII | AAGCTT | 4 cut(s) | 203, 1719, 3632, 4024 |
| HpaI | GTTAAC | 2 cut(s) | 2058, 2745 |
| HpaII | CCGG | 3 cut(s) | 265, 2469, 2681 |
| HphI | GGTGA | 6 cut(s) | 125, 208, 553, 1925, 3470, 3706 |
| Hpy166II | GTNNAC | 9 cut(s) | 652, 1121, 1742, 2058, 2081, 2508, 2745, 3383, 4125 |
| Hpy8I | GTNNAC | 9 cut(s) | 652, 1121, 1742, 2058, 2081, 2508, 2745, 3383, 4125 |
| Hpy99I | CGWCG | 1 cut(s) | 3116 |
| HpyCH4III | ACNGT | 4 cut(s) | 2888, 2915, 2954, 3076 |
| HpyCH4IV | ACGT | 4 cut(s) | 1534, 1618, 2998, 3185 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 265, 2021, 2030, 2131, 4063 |
| HpySE526I | ACGT | 4 cut(s) | 1534, 1618, 2998, 3185 |
| Hsp92I | GRCGYC | 1 cut(s) | 268 |
| KpnI | GGTACC | 1 cut(s) | 4104 |
| Ksp22I | TGATCA | 6 cut(s) | 558, 888, 2347, 2514, 3973, 4075 |
| KspAI | GTTAAC | 2 cut(s) | 2058, 2745 |
| LguI | GCTCTTC | 2 cut(s) | 3425, 3817 |
| LmnI | GCTCC | 3 cut(s) | 2545, 2761, 4037 |
| Lsp1109I | GCAGC | 9 cut(s) | 10, 412, 458, 757, 2112, 2604, 2765, 3357, 4041 |
| LweI | GCATC | 8 cut(s) | 139, 433, 1494, 3413, 3647, 3744, 3755, 3836 |
| MaeI | CTAG | 8 cut(s) | 429, 623, 2438, 2544, 2858, 2891, 3152, 3305 |
| MaeII | ACGT | 4 cut(s) | 1534, 1618, 2998, 3185 |
| MaeIII | GTNAC | 8 cut(s) | 100, 907, 937, 1394, 1418, 2522, 2948, 3076 |
| MbiI | CCGCTC | 3 cut(s) | 62, 3412, 3780 |
| MfeI | CAATTG | 5 cut(s) | 1185, 1665, 1734, 3197, 3371 |
| MflI | RGATCY | 2 cut(s) | 3212, 3798 |
| MhlI | GDGCHC | 2 cut(s) | 2542, 3465 |
| MlsI | TGGCCA | 2 cut(s) | 602, 2268 |
| MluNI | TGGCCA | 2 cut(s) | 602, 2268 |
| MmeI | TCCRAC | 6 cut(s) | 219, 1153, 1372, 2229, 2673, 3188 |
| Mox20I | TGGCCA | 2 cut(s) | 602, 2268 |
| Mph1103I | ATGCAT | 1 cut(s) | 3770 |
| MroXI | GAANNNNTTC | 2 cut(s) | 2112, 3552 |
| MscI | TGGCCA | 2 cut(s) | 602, 2268 |
| MslI | CAYNNNNRTG | 1 cut(s) | 681 |
| Msp20I | TGGCCA | 2 cut(s) | 602, 2268 |
| MspI | CCGG | 3 cut(s) | 265, 2469, 2681 |
| MspR9I | CCNGG | 3 cut(s) | 29, 1400, 2469 |
| MunI | CAATTG | 5 cut(s) | 1185, 1665, 1734, 3197, 3371 |
| Mva1269I | GAATGC | 1 cut(s) | 2134 |
| MvaI | CCWGG | 2 cut(s) | 29, 1400 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 265, 2021, 2030, 2131, 4063 |
| NciI | CCSGG | 1 cut(s) | 2469 |
| NcoI | CCATGG | 3 cut(s) | 1480, 2761, 3208 |
| NlaIV | GGNNCC | 4 cut(s) | 2176, 3953, 4006, 4102 |
| NmuCI | GTSAC | 2 cut(s) | 907, 937 |
| NsiI | ATGCAT | 1 cut(s) | 3770 |
| NspI | RCATGY | 5 cut(s) | 770, 1997, 2599, 2692, 2982 |
| NspV | TTCGAA | 1 cut(s) | 717 |
| PaeI | GCATGC | 1 cut(s) | 2599 |
| PciI | ACATGT | 1 cut(s) | 1993 |
| PciSI | GCTCTTC | 2 cut(s) | 3425, 3817 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2797, 3748 |
| PctI | GAATGC | 1 cut(s) | 2134 |
| PdmI | GAANNNNTTC | 2 cut(s) | 2112, 3552 |
| PfeI | GAWTC | 8 cut(s) | 87, 116, 134, 801, 866, 1230, 1475, 3503 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2264 |
| Ple19I | CGATCG | 1 cut(s) | 3111 |
| Ppu21I | YACGTR | 2 cut(s) | 1619, 2999 |
| PscI | ACATGT | 1 cut(s) | 1993 |
| PshAI | GACNNNNGTC | 1 cut(s) | 3939 |
| PshBI | ATTAAT | 1 cut(s) | 3509 |
| Psp124BI | GAGCTC | 1 cut(s) | 3465 |
| Psp6I | CCWGG | 2 cut(s) | 27, 1398 |
| PspFI | CCCAGC | 2 cut(s) | 109, 1859 |
| PspGI | CCWGG | 2 cut(s) | 27, 1398 |
| PspN4I | GGNNCC | 4 cut(s) | 2176, 3953, 4006, 4102 |
| PspPI | GGNCC | 2 cut(s) | 1345, 3782 |
| PstI | CTGCAG | 2 cut(s) | 775, 1758 |
| PsuI | RGATCY | 2 cut(s) | 3212, 3798 |
| PvuI | CGATCG | 1 cut(s) | 3111 |
| RsaI | GTAC | 8 cut(s) | 653, 777, 1122, 2262, 2774, 2815, 3223, 4102 |
| RsaNI | GTAC | 8 cut(s) | 652, 776, 1121, 2261, 2773, 2814, 3222, 4101 |
| RseI | CAYNNNNRTG | 1 cut(s) | 681 |
| SacI | GAGCTC | 1 cut(s) | 3465 |
| SapI | GCTCTTC | 2 cut(s) | 3425, 3817 |
| Sau96I | GGNCC | 2 cut(s) | 1345, 3782 |
| ScaI | AGTACT | 2 cut(s) | 2262, 2774 |
| ScrFI | CCNGG | 3 cut(s) | 29, 1400, 2469 |
| SduI | GDGCHC | 2 cut(s) | 2542, 3465 |
| SfaNI | GCATC | 8 cut(s) | 139, 433, 1494, 3413, 3647, 3744, 3755, 3836 |
| SfcI | CTRYAG | 3 cut(s) | 771, 783, 1754 |
| SfuI | TTCGAA | 1 cut(s) | 717 |
| SinI | GGWCC | 1 cut(s) | 1345 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 681 |
| SphI | GCATGC | 1 cut(s) | 2599 |
| SsiI | CCGC | 9 cut(s) | 60, 161, 946, 1963, 2132, 3177, 3343, 3410, 3780 |
| SspI | AATATT | 3 cut(s) | 1427, 1435, 1489 |
| SspMI | CTAG | 8 cut(s) | 429, 623, 2438, 2544, 2858, 2891, 3152, 3305 |
| SstI | GAGCTC | 1 cut(s) | 3465 |
| StyD4I | CCNGG | 3 cut(s) | 27, 1398, 2467 |
| StyI | CCWWGG | 4 cut(s) | 1480, 2761, 3208, 3947 |
| TaaI | ACNGT | 4 cut(s) | 2888, 2915, 2954, 3076 |
| TaiI | ACGT | 4 cut(s) | 1537, 1621, 3001, 3188 |
| TaqI | TCGA | 6 cut(s) | 717, 2646, 3111, 3465, 3742, 3870 |
| TaqII | GACCGA | 1 cut(s) | 2781 |
| TatI | WGTACW | 4 cut(s) | 775, 2260, 2772, 2813 |
| TauI | GCSGC | 3 cut(s) | 62, 3180, 3783 |
| TfiI | GAWTC | 8 cut(s) | 87, 116, 134, 801, 866, 1230, 1475, 3503 |
| TscAI | CASTG | 4 cut(s) | 197, 916, 955, 3394 |
| TseFI | GTSAC | 2 cut(s) | 907, 937 |
| TseI | GCWGC | 9 cut(s) | 23, 425, 446, 770, 2125, 2592, 2778, 3345, 4054 |
| Tsp45I | GTSAC | 2 cut(s) | 907, 937 |
| TspGWI | ACGGA | 5 cut(s) | 2544, 2921, 2936, 3182, 4076 |
| TspRI | CASTG | 4 cut(s) | 197, 916, 955, 3394 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2264 |
| VpaK11BI | GGWCC | 1 cut(s) | 1345 |
| VspI | ATTAAT | 1 cut(s) | 3509 |
| XbaI | TCTAGA | 4 cut(s) | 2857, 2890, 3151, 3304 |
| XceI | RCATGY | 5 cut(s) | 770, 1997, 2599, 2692, 2982 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 610, 1396, 4111 |
| XmiI | GTMKAC | 2 cut(s) | 2080, 3382 |
| XmnI | GAANNNNTTC | 2 cut(s) | 2112, 3552 |
| XspI | CTAG | 8 cut(s) | 429, 623, 2438, 2544, 2858, 2891, 3152, 3305 |
| ZrmI | AGTACT | 2 cut(s) | 2262, 2774 |
| Zsp2I | ATGCAT | 1 cut(s) | 3770 |