Rmu_sc0000076.1_g000028

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000076.1
OG0000155
Physical Location & Seq
Reverse (-)
110470 .. 116499
6030 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000076.1_g000028.1.cds

Sequence Viewer

Length: 1455 bp
atgaataagtcattggcaactgcaagttcccaagccgaaggagtttctgctgactacacagtagacagattgagtaatgctccaccggaagttgctcatcatattcttgcatttcttgattttagggatctcattcgactgggaagtgtgtccaaaatgtgcagagttttttctctatcagctccatcattggaagtttcttcatctgaggcaggaaacaggcggcaacaactcaacttgttgaattctatagataggtacatgattcatcgaggggatgataaaattaagcactttcttgttgattggagtttcagtgcaggcatttctgaagaggttttccggatgatgacatggatccttattgcagtgaggtgtaatgttgaagtgcttgaacttaggttatgggcgcctgaattgaataggattgaatcggatgggacggtgcttgaattgccatcttgcgtctatcgttgtgaatctttaaggtctctattgatcaagacacagacaattctgaaagcaccctctgttacttgttccaataatctccaatacttgaagttgacaaatgtcagaatggaagatggctttggaaaatggatctcccactcatgcaaatgcattaaggaattattgttatttgatgttcgtgtgctaagtttcaccgtggaaagctcgtctttggaatcatttagctttgtctctatgtataacaatgacctctgccatattggcatctcaggtgagaagcttacaaagataagaatagagtgggaattctataaaactagcagcggcactaccagatcattaaacgtttctgctccaaatcttaaatatttgaagtggattgggaatttgttgaattaccaaaatctggggaaatttatgtgtttagagaaagctcacatttttctgaagcacaagggagatgactatgactttgacaatgcatttgaggttctttgcagtttgtgcagggttaaagttcttattctgagtgaagagaccgctaaggttttgctcagggaaggtctagtgcatgcaccattggatgatattacttacttgagtatgcatattatgagcttgactgatgacctagtccctgcaatggtttctcttctgagaggaatgcctaatttgagtactttgtacataaagtcttacccttccttgcacattggtaaaccgaaagcatgtggatttaagagtaaatactggaaatcccagaagctggattgtgttcatcagcttcaggatgtatctatagcgctttccactggttatattaacaatgccttggatttacaagttggtgattgcaacatcacctggggcgccatcaccatgatggacgctatccatggcgtgatggatatggactacgccagccctaggctgatggtggatggaggcggtgccctaggcaatagcgtcggtcacacttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD

Protein Analysis

484

Amino Acids

54.31

Weight (kDa)

6.7

Isoelectric Point (pI)

41.08

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 3 cut(s) 409, 1343, 1424
AccB7I CCANNNNNTGG 2 cut(s) 880, 1240
AccI GTMKAC 1 cut(s) 63
AccIII TCCGGA 1 cut(s) 342
AciI CCGC 4 cut(s) 223, 798, 1014, 1422
AclI AACGTT 1 cut(s) 819
AclWI GGATC 4 cut(s) 135, 352, 365, 611
AcsI RAATTY 4 cut(s) 244, 779, 859, 887
AcuI CTGAAG 3 cut(s) 351, 941, 1244
AcyI GRCGYC 2 cut(s) 410, 1344
AfaI GTAC 3 cut(s) 260, 1153, 1160
AfeI AGCGCT 1 cut(s) 1278
AfiI CCNNNNNNNGG 4 cut(s) 880, 1117, 1240, 1401
AgsI TTSAA 9 cut(s) 244, 386, 395, 421, 431, 452, 562, 847, 868
AjnI CCWGG 1 cut(s) 1337
AjuI GAANNNNNNNTTGG 3 cut(s) 28, 576, 608
AluBI AGCT 8 cut(s) 182, 678, 699, 754, 908, 1092, 1240, 1258
AluI AGCT 8 cut(s) 182, 678, 699, 754, 908, 1092, 1240, 1258
Alw26I GTCTC 3 cut(s) 495, 709, 1004
AlwI GGATC 4 cut(s) 135, 352, 365, 611
AlwNI CAGNNNCTG 1 cut(s) 1240
Aor13HI TCCGGA 1 cut(s) 342
Aor51HI AGCGCT 1 cut(s) 1278
ApeKI GCWGC 1 cut(s) 795
ApoI RAATTY 4 cut(s) 244, 779, 859, 887
ArsI GACNNNNNNTTYG 4 cut(s) 929, 941, 961, 973
AspA2I CCTAGG 2 cut(s) 1400, 1429
AspLEI GCGC 3 cut(s) 412, 1279, 1346
AsuHPI GGTGA 5 cut(s) 658, 758, 1327, 1334, 1342
AvrII CCTAGG 2 cut(s) 1400, 1429
BaeGI GKGCMC 1 cut(s) 1429
BamHI GGATCC 1 cut(s) 357
BanI GGYRCC 3 cut(s) 409, 1343, 1424
BbvI GCAGC 1 cut(s) 807
BccI CCATC 9 cut(s) 193, 431, 466, 581, 1351, 1355, 1372, 1402, 1409
BcgI CGANNNNNNTGC 1 cut(s) 1423
BciT130I CCWGG 1 cut(s) 1339
BclI TGATCA 1 cut(s) 498
BcoDI GTCTC 3 cut(s) 495, 709, 1004
BfaI CTAG 5 cut(s) 792, 1040, 1106, 1401, 1430
BfmI CTRYAG 2 cut(s) 249, 1272
BfoI RGCGCY 3 cut(s) 413, 1280, 1347
BglI GCCNNNNNGGC 1 cut(s) 735
BisI GCNGC 3 cut(s) 224, 796, 799
BlnI CCTAGG 2 cut(s) 1400, 1429
BlsI GCNGC 3 cut(s) 225, 797, 800
BmcAI AGTACT 1 cut(s) 1153
Bme1390I CCNGG 1 cut(s) 1339
BmiI GGNNCC 4 cut(s) 359, 411, 1345, 1426
BmrFI CCNGG 1 cut(s) 1339
BmrI ACTGGG 1 cut(s) 149
BmsI GCATC 1 cut(s) 747
BmuI ACTGGG 1 cut(s) 149
BoxI GACNNNNGTC 1 cut(s) 572
BplI GAGNNNNNCTC 2 cut(s) 64, 96
Bpu10I CCTNAGC 2 cut(s) 1017, 1028
BpuEI CTTGAG 1 cut(s) 1093
BsaHI GRCGYC 2 cut(s) 410, 1344
BsaI GGTCTC 2 cut(s) 495, 1004
BsaJI CCNNGG 6 cut(s) 669, 1305, 1338, 1369, 1400, 1429
BsaWI WCCGGW 2 cut(s) 85, 342
BsaXI ACNNNNNCTCC 2 cut(s) 301, 331
Bsc4I CCNNNNNNNGG 4 cut(s) 880, 1117, 1240, 1401
Bse1I ACTGG 3 cut(s) 144, 1229, 1291
Bse3DI GCAATG 1 cut(s) 1122
BseAI TCCGGA 1 cut(s) 342
BseBI CCWGG 1 cut(s) 1339
BseDI CCNNGG 6 cut(s) 669, 1305, 1338, 1369, 1400, 1429
BseGI GGATG 6 cut(s) 283, 351, 442, 1063, 1270, 1420
BseLI CCNNNNNNNGG 4 cut(s) 880, 1117, 1240, 1401
BseMI GCAATG 1 cut(s) 1122
BseMII CTCAG 5 cut(s) 198, 756, 992, 1042, 1121
BseNI ACTGG 3 cut(s) 144, 1229, 1291
BseSI GKGCMC 1 cut(s) 1429
BseXI GCAGC 1 cut(s) 807
BsgI GTGCAG 3 cut(s) 181, 339, 1000
BshNI GGYRCC 3 cut(s) 409, 1343, 1424
BsiSI CCGG 2 cut(s) 86, 343
BslFI GGGAC 2 cut(s) 454, 1094
BslI CCNNNNNNNGG 4 cut(s) 880, 1117, 1240, 1401
BsmAI GTCTC 3 cut(s) 495, 709, 1004
BsmFI GGGAC 2 cut(s) 454, 1094
BsmI GAATGC 1 cut(s) 1143
Bso31I GGTCTC 2 cut(s) 495, 1004
Bsp1286I GDGCHC 1 cut(s) 1429
Bsp13I TCCGGA 1 cut(s) 342
Bsp1407I TGTACA 1 cut(s) 1158
Bsp143I GATC 5 cut(s) 127, 357, 498, 603, 809
Bsp19I CCATGG 1 cut(s) 1369
BspACI CCGC 4 cut(s) 223, 798, 1014, 1422
BspCNI CTCAG 5 cut(s) 199, 755, 993, 1041, 1122
BspEI TCCGGA 1 cut(s) 342
BspLI GGNNCC 4 cut(s) 359, 411, 1345, 1426
BspPI GGATC 4 cut(s) 135, 352, 365, 611
BspT107I GGYRCC 3 cut(s) 409, 1343, 1424
BspTNI GGTCTC 2 cut(s) 495, 1004
BsrDI GCAATG 1 cut(s) 1122
BsrGI TGTACA 1 cut(s) 1158
BsrI ACTGG 3 cut(s) 144, 1229, 1291
BssECI CCNNGG 6 cut(s) 669, 1305, 1338, 1369, 1400, 1429
BssMI GATC 5 cut(s) 127, 357, 498, 603, 809
BssNI GRCGYC 2 cut(s) 410, 1344
BssT1I CCWWGG 4 cut(s) 1305, 1369, 1400, 1429
Bst2UI CCWGG 1 cut(s) 1339
Bst4CI ACNGT 3 cut(s) 61, 445, 670
Bst6I CTCTTC 3 cut(s) 327, 1002, 1131
BstACI GRCGYC 2 cut(s) 410, 1344
BstAPI GCANNNNNTGC 1 cut(s) 978
BstAUI TGTACA 1 cut(s) 1158
BstC8I GCNNGC 3 cut(s) 322, 1047, 1396
BstDEI CTNAG 9 cut(s) 207, 398, 659, 742, 1001, 1017, 1028, 1130, 1452
BstDSI CCRYGG 2 cut(s) 669, 1369
BstF5I GGATG 6 cut(s) 283, 351, 442, 1063, 1270, 1420
BstH2I RGCGCY 3 cut(s) 413, 1280, 1347
BstHHI GCGC 3 cut(s) 412, 1279, 1346
BstKTI GATC 5 cut(s) 130, 360, 501, 606, 812
BstMAI GTCTC 3 cut(s) 495, 709, 1004
BstMBI GATC 5 cut(s) 127, 357, 498, 603, 809
BstMWI GCNNNNNNNGC 3 cut(s) 454, 735, 978
BstNI CCWGG 1 cut(s) 1339
BstNSI RCATGY 2 cut(s) 1049, 1206
BstPAI GACNNNNGTC 1 cut(s) 572
BstSCI CCNGG 1 cut(s) 1337
BstSFI CTRYAG 2 cut(s) 249, 1272
BstSLI GKGCMC 1 cut(s) 1429
BstV1I GCAGC 1 cut(s) 807
BstX2I RGATCY 3 cut(s) 127, 357, 603
BstYI RGATCY 3 cut(s) 127, 357, 603
BtgI CCRYGG 2 cut(s) 669, 1369
BtsCI GGATG 6 cut(s) 283, 351, 442, 1063, 1270, 1420
BtsI GCAGTG 1 cut(s) 375
BtsIMutI CAGTG 3 cut(s) 322, 375, 1284
Cac8I GCNNGC 3 cut(s) 322, 1047, 1396
CaiI CAGNNNCTG 1 cut(s) 1240
CfoI GCGC 3 cut(s) 412, 1279, 1346
CseI GACGC 3 cut(s) 454, 1370, 1429
Csp6I GTAC 3 cut(s) 259, 1152, 1159
CviAII CATG 7 cut(s) 262, 354, 615, 1046, 1203, 1354, 1370
CviQI GTAC 3 cut(s) 259, 1152, 1159
DdeI CTNAG 9 cut(s) 207, 398, 659, 742, 1001, 1017, 1028, 1130, 1452
DinI GGCGCC 2 cut(s) 411, 1345
DpnI GATC 5 cut(s) 129, 359, 500, 605, 811
DpnII GATC 5 cut(s) 127, 357, 498, 603, 809
Eam1104I CTCTTC 3 cut(s) 327, 1002, 1131
EarI CTCTTC 3 cut(s) 327, 1002, 1131
Eco130I CCWWGG 4 cut(s) 1305, 1369, 1400, 1429
Eco31I GGTCTC 2 cut(s) 495, 1004
Eco47III AGCGCT 1 cut(s) 1278
Eco57I CTGAAG 3 cut(s) 351, 941, 1244
EcoRI GAATTC 2 cut(s) 244, 779
EcoRII CCWGG 1 cut(s) 1337
EcoT14I CCWWGG 4 cut(s) 1305, 1369, 1400, 1429
EcoT22I ATGCAT 3 cut(s) 626, 958, 1083
EgeI GGCGCC 2 cut(s) 411, 1345
EheI GGCGCC 2 cut(s) 411, 1345
ErhI CCWWGG 4 cut(s) 1305, 1369, 1400, 1429
FaeI CATG 7 cut(s) 265, 357, 618, 1049, 1206, 1357, 1373
FalI AAGNNNNNCTT 2 cut(s) 667, 699
FaqI GGGAC 2 cut(s) 454, 1094
FatI CATG 7 cut(s) 261, 353, 614, 1045, 1202, 1353, 1369
FbaI TGATCA 1 cut(s) 498
FblI GTMKAC 1 cut(s) 63
Fnu4HI GCNGC 3 cut(s) 224, 796, 799
FokI GGATG 6 cut(s) 290, 358, 449, 1070, 1277, 1427
Fsp4HI GCNGC 3 cut(s) 224, 796, 799
FspBI CTAG 5 cut(s) 792, 1040, 1106, 1401, 1430
GlaI GCGC 3 cut(s) 411, 1278, 1345
GluI GCNGC 3 cut(s) 224, 796, 799
HaeII RGCGCY 3 cut(s) 413, 1280, 1347
HapII CCGG 2 cut(s) 86, 343
HgaI GACGC 3 cut(s) 454, 1370, 1429
HhaI GCGC 3 cut(s) 412, 1279, 1346
Hin1I GRCGYC 2 cut(s) 410, 1344
Hin1II CATG 7 cut(s) 265, 357, 618, 1049, 1206, 1357, 1373
Hin6I GCGC 3 cut(s) 410, 1277, 1344
HinP1I GCGC 3 cut(s) 410, 1277, 1344
HincII GTYRAC 1 cut(s) 567
HindII GTYRAC 1 cut(s) 567
HindIII AAGCTT 1 cut(s) 752
HinfI GANTC 4 cut(s) 265, 431, 479, 689
HpaII CCGG 2 cut(s) 86, 343
HphI GGTGA 5 cut(s) 658, 758, 1327, 1334, 1342
Hpy166II GTNNAC 3 cut(s) 64, 567, 1193
Hpy188I TCNGA 8 cut(s) 208, 331, 436, 519, 578, 921, 1002, 1131
Hpy188III TCNNGA 4 cut(s) 116, 343, 502, 1262
Hpy8I GTNNAC 3 cut(s) 64, 567, 1193
Hpy99I CGWCG 1 cut(s) 1445
HpyAV CCTTC 3 cut(s) 32, 1028, 1185
HpyCH4III ACNGT 3 cut(s) 61, 445, 670
HpyCH4IV ACGT 1 cut(s) 819
HpyF10VI GCNNNNNNNGC 3 cut(s) 454, 735, 978
HpyF3I CTNAG 9 cut(s) 207, 398, 659, 742, 1001, 1017, 1028, 1130, 1452
HpySE526I ACGT 1 cut(s) 819
Hsp92I GRCGYC 2 cut(s) 410, 1344
Hsp92II CATG 7 cut(s) 265, 357, 618, 1049, 1206, 1357, 1373
HspAI GCGC 3 cut(s) 410, 1277, 1344
KasI GGCGCC 2 cut(s) 409, 1343
Kpn2I TCCGGA 1 cut(s) 342
Ksp22I TGATCA 1 cut(s) 498
Kzo9I GATC 5 cut(s) 127, 357, 498, 603, 809
LmnI GCTCC 3 cut(s) 85, 187, 832
Lsp1109I GCAGC 1 cut(s) 807
LweI GCATC 1 cut(s) 747
MaeI CTAG 5 cut(s) 792, 1040, 1106, 1401, 1430
MaeII ACGT 1 cut(s) 819
MaeIII GTNAC 2 cut(s) 532, 1445
MalI GATC 5 cut(s) 129, 359, 500, 605, 811
MboI GATC 5 cut(s) 127, 357, 498, 603, 809
MboII GAAGA 5 cut(s) 192, 344, 596, 1019, 1118
MflI RGATCY 3 cut(s) 127, 357, 603
MhlI GDGCHC 1 cut(s) 1429
Mly113I GGCGCC 2 cut(s) 410, 1344
MnlI CCTC 9 cut(s) 202, 266, 328, 366, 538, 734, 955, 1127, 1412
Mph1103I ATGCAT 3 cut(s) 626, 958, 1083
MroI TCCGGA 1 cut(s) 342
MseI TTAA 8 cut(s) 288, 485, 627, 815, 837, 987, 1212, 1296
MslI CAYNNNNRTG 3 cut(s) 619, 1352, 1355
MspA1I CMGCKG 1 cut(s) 798
MspI CCGG 2 cut(s) 86, 343
MspR9I CCNGG 1 cut(s) 1339
Mva1269I GAATGC 1 cut(s) 1143
MvaI CCWGG 1 cut(s) 1339
MwoI GCNNNNNNNGC 3 cut(s) 454, 735, 978
NarI GGCGCC 2 cut(s) 410, 1344
NcoI CCATGG 1 cut(s) 1369
NdeII GATC 5 cut(s) 127, 357, 498, 603, 809
NlaIII CATG 7 cut(s) 265, 357, 618, 1049, 1206, 1357, 1373
NlaIV GGNNCC 4 cut(s) 359, 411, 1345, 1426
NmuCI GTSAC 1 cut(s) 1445
NsiI ATGCAT 3 cut(s) 626, 958, 1083
NspI RCATGY 2 cut(s) 1049, 1206
PaeI GCATGC 1 cut(s) 1049
PctI GAATGC 1 cut(s) 1143
PfeI GAWTC 4 cut(s) 265, 431, 479, 689
PflFI GACNNNGTC 1 cut(s) 1106
PflMI CCANNNNNTGG 2 cut(s) 880, 1240
PkrI GCNGC 3 cut(s) 225, 797, 800
PluTI GGCGCC 2 cut(s) 413, 1347
PshAI GACNNNNGTC 1 cut(s) 572
Psp1406I AACGTT 1 cut(s) 819
Psp6I CCWGG 1 cut(s) 1337
PspGI CCWGG 1 cut(s) 1337
PspN4I GGNNCC 4 cut(s) 359, 411, 1345, 1426
PstNI CAGNNNCTG 1 cut(s) 1240
PsuI RGATCY 3 cut(s) 127, 357, 603
PsyI GACNNNGTC 1 cut(s) 1106
RsaI GTAC 3 cut(s) 260, 1153, 1160
RsaNI GTAC 3 cut(s) 259, 1152, 1159
RseI CAYNNNNRTG 3 cut(s) 619, 1352, 1355
SaqAI TTAA 8 cut(s) 288, 485, 627, 815, 837, 987, 1212, 1296
SatI GCNGC 3 cut(s) 224, 796, 799
Sau3AI GATC 5 cut(s) 127, 357, 498, 603, 809
ScaI AGTACT 1 cut(s) 1153
ScrFI CCNGG 1 cut(s) 1339
SduI GDGCHC 1 cut(s) 1429
SfaNI GCATC 1 cut(s) 747
SfcI CTRYAG 2 cut(s) 249, 1272
SfoI GGCGCC 2 cut(s) 411, 1345
SmiMI CAYNNNNRTG 3 cut(s) 619, 1352, 1355
SmlI CTYRAG 1 cut(s) 1072
SmoI CTYRAG 1 cut(s) 1072
SphI GCATGC 1 cut(s) 1049
SsiI CCGC 4 cut(s) 223, 798, 1014, 1422
SspDI GGCGCC 2 cut(s) 409, 1343
SspI AATATT 1 cut(s) 842
SspMI CTAG 5 cut(s) 792, 1040, 1106, 1401, 1430
StyD4I CCNGG 1 cut(s) 1337
StyI CCWWGG 4 cut(s) 1305, 1369, 1400, 1429
TaaI ACNGT 3 cut(s) 61, 445, 670
TaiI ACGT 1 cut(s) 822
TaqI TCGA 2 cut(s) 136, 271
TaqII GACCGA 1 cut(s) 1433
TatI WGTACW 2 cut(s) 1151, 1158
TauI GCSGC 2 cut(s) 226, 801
TfiI GAWTC 4 cut(s) 265, 431, 479, 689
Tru1I TTAA 8 cut(s) 288, 485, 627, 815, 837, 987, 1212, 1296
Tru9I TTAA 8 cut(s) 288, 485, 627, 815, 837, 987, 1212, 1296
TscAI CASTG 3 cut(s) 322, 375, 1291
TseFI GTSAC 1 cut(s) 1445
TseI GCWGC 1 cut(s) 795
Tsp45I GTSAC 1 cut(s) 1445
TspDTI ATGAA 4 cut(s) 17, 192, 257, 1241
TspRI CASTG 3 cut(s) 322, 375, 1291
Tth111I GACNNNGTC 1 cut(s) 1106
Van91I CCANNNNNTGG 2 cut(s) 880, 1240
XapI RAATTY 4 cut(s) 244, 779, 859, 887
XceI RCATGY 2 cut(s) 1049, 1206
XcmI CCANNNNNNNNNTGG 1 cut(s) 1354
XmaJI CCTAGG 2 cut(s) 1400, 1429
XmiI GTMKAC 1 cut(s) 63
XspI CTAG 5 cut(s) 792, 1040, 1106, 1401, 1430
ZrmI AGTACT 1 cut(s) 1153
Zsp2I ATGCAT 3 cut(s) 626, 958, 1083
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.