Rroxscaffold_3G00242480

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0000155
Physical Location & Seq
Forward (+)
34788314 .. 34791165
2852 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00242480.1

Sequence Viewer

Length: 1431 bp
ATGGAAAACAAGCATAAGTTATTGGCAACTGCAAGTTCTCAAGATCAAGGAGTGTGTCATGATACTATAAGAGATAGATTCAGTACTCTTCCGGATGAAATTGCTCATCATATACTCTCAATGGTGGATTTAAGAGATCTCACTCGTGTAGGTGCCGTGTCAAAGAGATGCTATGAGTTTTATCTCTCAACGCCATCATTCTGCTTTGACGCGCATTATGGTAACATGCAGTGGAAATCAAACAAGATGAATTGTTTCGATCAGTTCTTGCATCGTCGTGGGAATAATAAGATACATCATTTTGGTATTGATTTGAGTTTACCGGCAAGCCTCTCCTGCAAGGTATTCCAAGTTATGACGTGGATTGATAATGCAGCAAGGTGCAGTGTTGAAGTGCTTAATCTTCAGTTGACCATGCGATCCAAGGGGAATATGGTAGGATTGCCATCTTCCATATTTCGTTGTGGATCTTTGAGGTCACTATTGGTGAAAATGGAGGAGATTTTCAAAGTTCCATCCTTTCCTTGTCCCAATAATCTCAAATGCTTGAACTTGAGCTACGTTAGAATAAATGAGGAGTTTTCCAAATGGATCTCAAGTTCCTGCAAATGCATTAAGGAAATAAAGCTCTTAATGGTTAGTACGGATAATTTAACCATTGAGAACTCATCTTTGGAATCATTTACTTTTGTGGCCTGTTCCGACCTCTGCTGTCTTAACATCTCAGGTGAGAAACTTGAAATTATACATATAAAGTGGAAATTCTTTAACCCAGGCAGCAGATCATTACATATTTGTGCTCCAAATCTAAAATATTTGAAGTGGGTTGGGGATTTGGTGAGTCATCCAAAACTGGAGAAATTATTATGTTTAGTAAAGGCTGAGATTTTTCTGGAGGCCAAGTCAATCTGTGTCTGTGACTTTCACAACGCATTCGAGTTGCTTTGCAGTATTTGCAGGGTTAAAGAACTTATTCTAAGTGACAAGACCATTAAGGCTTTGTTCAGGGAAGGTTCCATGGCTGCACCTATCTTTGATACTTCTTACTTGCGTATAAATATTGCGAACCTGAATAACACTCTAGTCCCAGCAATGGTCTCTCTTATGAGAGGAATGTCAAATTTGAATACTTTGGACATAAAGTCTGACCCTTCCTTATTCTTCCTCGAACCAAAAGCATGCGGATTTAATGGGAAATACTGGAAATCCCAAAACCTGGATTTTGTAAACCAGCTTAAGGAGGTAACAATAGAACTTTCAAATGGTAACAATGCATGGCAATTGGCAAGGTTTATTCTCGAGCATGCTCAGAATTTGAAGAAGATGACCATATTTTATTTACCCAGAAAATTACATGTCATTGATAAGGTAAGAAACAGCAAGAAGGTCTCCTCTGCCACAATTGACTTTCATGAGAAACAATGGGGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box-like FBD

Protein Analysis

476

Amino Acids

54.35

Weight (kDa)

8.91

Isoelectric Point (pI)

41.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 27 - 59 1e-06 F-box-like
LRR_At5g56370 PF24758 120 - 276 1.2e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 152
AccB7I CCANNNNNTGG 1 cut(s) 1216
AccII CGCG 1 cut(s) 212
AccIII TCCGGA 1 cut(s) 91
AciI CCGC 1 cut(s) 1182
AclWI GGATC 3 cut(s) 414, 475, 599
AcsI RAATTY 3 cut(s) 761, 1120, 1312
AcuI CTGAAG 1 cut(s) 389
AfaI GTAC 2 cut(s) 85, 643
AfiI CCNNNNNNNGG 3 cut(s) 1093, 1216, 1237
AflII CTTAAG 1 cut(s) 1235
AflIII ACRYGT 1 cut(s) 1354
AgsI TTSAA 8 cut(s) 392, 508, 550, 740, 820, 1126, 1260, 1318
AhdI GACNNNNNGTC 1 cut(s) 1141
AjiI CACGTC 1 cut(s) 360
AjnI CCWGG 2 cut(s) 772, 1215
AjuI GAANNNNNNNTTGG 2 cut(s) 656, 688
AloI GAACNNNNNNTCC 2 cut(s) 583, 615
AluBI AGCT 3 cut(s) 558, 628, 1234
AluI AGCT 3 cut(s) 558, 628, 1234
Alw21I GWGCWC 1 cut(s) 802
Alw26I GTCTC 2 cut(s) 1102, 1393
AlwI GGATC 3 cut(s) 414, 475, 599
Ama87I CYCGRG 1 cut(s) 1298
Aor13HI TCCGGA 1 cut(s) 91
AoxI GGCC 2 cut(s) 693, 897
ApeKI GCWGC 3 cut(s) 374, 777, 1022
ApoI RAATTY 3 cut(s) 761, 1120, 1312
Asp700I GAANNNNTTC 2 cut(s) 254, 972
AspLEI GCGC 1 cut(s) 214
AsuHPI GGTGA 3 cut(s) 499, 740, 850
AvaI CYCGRG 1 cut(s) 1298
BanI GGYRCC 1 cut(s) 152
BauI CACGAG 1 cut(s) 144
Bbv12I GWGCWC 1 cut(s) 802
BbvI GCAGC 3 cut(s) 386, 789, 1009
BccI CCATC 3 cut(s) 202, 454, 523
BceAI ACGGC 1 cut(s) 140
BciT130I CCWGG 2 cut(s) 774, 1217
BcoDI GTCTC 2 cut(s) 1102, 1393
BfaI CTAG 1 cut(s) 1082
BfrI CTTAAG 1 cut(s) 1235
BglII AGATCT 1 cut(s) 136
BisI GCNGC 3 cut(s) 375, 778, 1023
BlsI GCNGC 3 cut(s) 376, 779, 1024
BmcAI AGTACT 1 cut(s) 85
Bme1390I CCNGG 2 cut(s) 774, 1217
BmeRI GACNNNNNGTC 1 cut(s) 1141
BmeT110I CYCGRG 1 cut(s) 1298
BmgBI CACGTC 1 cut(s) 360
BmiI GGNNCC 2 cut(s) 154, 1015
BmrFI CCNGG 2 cut(s) 774, 1217
BmsI GCATC 2 cut(s) 158, 280
BpmI CTGGAG 2 cut(s) 875, 914
BpuEI CTTGAG 3 cut(s) 24, 574, 580
BsaBI GATNNNNATC 1 cut(s) 445
BsaI GGTCTC 2 cut(s) 1102, 1393
BsaJI CCNNGG 3 cut(s) 423, 772, 1017
BsaWI WCCGGW 1 cut(s) 91
BsaXI ACNNNNNCTCC 2 cut(s) 887, 917
Bsc4I CCNNNNNNNGG 3 cut(s) 1093, 1216, 1237
Bse118I RCCGGY 1 cut(s) 322
Bse1I ACTGG 2 cut(s) 858, 1205
Bse3DI GCAATG 1 cut(s) 1098
Bse8I GATNNNNATC 1 cut(s) 445
BseAI TCCGGA 1 cut(s) 91
BseBI CCWGG 2 cut(s) 774, 1217
BseDI CCNNGG 3 cut(s) 423, 772, 1017
BseGI GGATG 3 cut(s) 100, 515, 844
BseJI GATNNNNATC 1 cut(s) 445
BseLI CCNNNNNNNGG 3 cut(s) 1093, 1216, 1237
BseMI GCAATG 1 cut(s) 1098
BseMII CTCAG 3 cut(s) 738, 873, 1322
BseNI ACTGG 2 cut(s) 858, 1205
BseRI GAGGAG 3 cut(s) 512, 590, 1381
BseXI GCAGC 3 cut(s) 386, 789, 1009
BseYI CCCAGC 1 cut(s) 1087
BsgI GTGCAG 2 cut(s) 403, 1008
Bsh1236I CGCG 1 cut(s) 212
BshFI GGCC 2 cut(s) 695, 899
BshNI GGYRCC 1 cut(s) 152
BsiHKAI GWGCWC 1 cut(s) 802
BsiHKCI CYCGRG 1 cut(s) 1298
BsiSI CCGG 2 cut(s) 92, 323
BslFI GGGAC 2 cut(s) 513, 1070
BslI CCNNNNNNNGG 3 cut(s) 1093, 1216, 1237
BsmAI GTCTC 2 cut(s) 1102, 1393
BsmFI GGGAC 2 cut(s) 513, 1070
BsmI GAATGC 1 cut(s) 932
BsnI GGCC 2 cut(s) 695, 899
Bso31I GGTCTC 2 cut(s) 1102, 1393
BsoBI CYCGRG 1 cut(s) 1298
Bsp1286I GDGCHC 1 cut(s) 802
Bsp13I TCCGGA 1 cut(s) 91
Bsp143I GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
Bsp19I CCATGG 1 cut(s) 1017
BspACI CCGC 1 cut(s) 1182
BspANI GGCC 2 cut(s) 695, 899
BspCNI CTCAG 3 cut(s) 737, 874, 1321
BspEI TCCGGA 1 cut(s) 91
BspFNI CGCG 1 cut(s) 212
BspHI TCATGA 2 cut(s) 58, 1411
BspLI GGNNCC 2 cut(s) 154, 1015
BspPI GGATC 3 cut(s) 414, 475, 599
BspT107I GGYRCC 1 cut(s) 152
BspTI CTTAAG 1 cut(s) 1235
BspTNI GGTCTC 2 cut(s) 1102, 1393
BsrDI GCAATG 1 cut(s) 1098
BsrFI RCCGGY 1 cut(s) 322
BsrI ACTGG 2 cut(s) 858, 1205
BssAI RCCGGY 1 cut(s) 322
BssECI CCNNGG 3 cut(s) 423, 772, 1017
BssMI GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
BssSI CACGAG 1 cut(s) 144
BssT1I CCWWGG 2 cut(s) 423, 1017
Bst2BI CACGAG 1 cut(s) 144
Bst2UI CCWGG 2 cut(s) 774, 1217
Bst6I CTCTTC 1 cut(s) 93
BstAFI CTTAAG 1 cut(s) 1235
BstAPI GCANNNNNTGC 1 cut(s) 954
BstC8I GCNNGC 3 cut(s) 328, 1180, 1305
BstDEI CTNAG 4 cut(s) 724, 882, 977, 1308
BstDSI CCRYGG 1 cut(s) 1017
BstF5I GGATG 3 cut(s) 100, 515, 844
BstFNI CGCG 1 cut(s) 212
BstHHI GCGC 1 cut(s) 214
BstKTI GATC 7 cut(s) 46, 139, 262, 422, 470, 594, 785
BstMAI GTCTC 2 cut(s) 1102, 1393
BstMBI GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
BstMWI GCNNNNNNNGC 2 cut(s) 336, 954
BstNI CCWGG 2 cut(s) 774, 1217
BstNSI RCATGY 4 cut(s) 229, 1182, 1307, 1358
BstSCI CCNGG 2 cut(s) 772, 1215
BstUI CGCG 1 cut(s) 212
BstV1I GCAGC 3 cut(s) 386, 789, 1009
BstX2I RGATCY 3 cut(s) 136, 467, 591
BstYI RGATCY 3 cut(s) 136, 467, 591
BsuRI GGCC 2 cut(s) 695, 899
BtgI CCRYGG 1 cut(s) 1017
BtrI CACGTC 1 cut(s) 360
BtsCI GGATG 3 cut(s) 100, 515, 844
BtsI GCAGTG 2 cut(s) 236, 391
BtsIMutI CAGTG 2 cut(s) 236, 391
Cac8I GCNNGC 3 cut(s) 328, 1180, 1305
CciI TCATGA 2 cut(s) 58, 1411
CfoI GCGC 1 cut(s) 214
Cfr10I RCCGGY 1 cut(s) 322
CseI GACGC 1 cut(s) 218
Csp6I GTAC 2 cut(s) 84, 642
CviAII CATG 9 cut(s) 59, 226, 415, 1018, 1179, 1275, 1304, 1355, 1412
CviJI RGCY 9 cut(s) 330, 558, 628, 695, 881, 899, 998, 1022, 1234
CviKI_1 RGCY 9 cut(s) 330, 558, 628, 695, 881, 899, 998, 1022, 1234
CviQI GTAC 2 cut(s) 84, 642
DdeI CTNAG 4 cut(s) 724, 882, 977, 1308
DpnI GATC 7 cut(s) 45, 138, 261, 421, 469, 593, 784
DpnII GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
DriI GACNNNNNGTC 1 cut(s) 1141
Eam1104I CTCTTC 1 cut(s) 93
Eam1105I GACNNNNNGTC 1 cut(s) 1141
EarI CTCTTC 1 cut(s) 93
Eco130I CCWWGG 2 cut(s) 423, 1017
Eco31I GGTCTC 2 cut(s) 1102, 1393
Eco57I CTGAAG 1 cut(s) 389
Eco88I CYCGRG 1 cut(s) 1298
EcoRII CCWGG 2 cut(s) 772, 1215
EcoT14I CCWWGG 2 cut(s) 423, 1017
EcoT22I ATGCAT 2 cut(s) 614, 1276
ErhI CCWWGG 2 cut(s) 423, 1017
FaeI CATG 9 cut(s) 62, 229, 418, 1021, 1182, 1278, 1307, 1358, 1415
FaqI GGGAC 2 cut(s) 513, 1070
FatI CATG 9 cut(s) 58, 225, 414, 1017, 1178, 1274, 1303, 1354, 1411
Fnu4HI GCNGC 3 cut(s) 375, 778, 1023
FokI GGATG 3 cut(s) 107, 502, 831
Fsp4HI GCNGC 3 cut(s) 375, 778, 1023
FspBI CTAG 1 cut(s) 1082
GlaI GCGC 1 cut(s) 213
GluI GCNGC 3 cut(s) 375, 778, 1023
GsaI CCCAGC 1 cut(s) 1091
GsuI CTGGAG 2 cut(s) 875, 914
HaeIII GGCC 2 cut(s) 695, 899
HapII CCGG 2 cut(s) 92, 323
HgaI GACGC 1 cut(s) 218
HhaI GCGC 1 cut(s) 214
Hin1II CATG 9 cut(s) 62, 229, 418, 1021, 1182, 1278, 1307, 1358, 1415
Hin6I GCGC 1 cut(s) 212
HinP1I GCGC 1 cut(s) 212
HincII GTYRAC 1 cut(s) 411
HindII GTYRAC 1 cut(s) 411
HinfI GANTC 3 cut(s) 78, 677, 841
HpaII CCGG 2 cut(s) 92, 323
HphI GGTGA 3 cut(s) 499, 740, 850
Hpy166II GTNNAC 3 cut(s) 320, 411, 1228
Hpy188I TCNGA 3 cut(s) 703, 1147, 1311
Hpy188III TCNNGA 6 cut(s) 41, 59, 92, 893, 1298, 1412
Hpy8I GTNNAC 3 cut(s) 320, 411, 1228
Hpy99I CGWCG 1 cut(s) 279
HpyAV CCTTC 3 cut(s) 1004, 1161, 1378
HpyCH4IV ACGT 2 cut(s) 359, 561
HpyF10VI GCNNNNNNNGC 2 cut(s) 336, 954
HpyF3I CTNAG 4 cut(s) 724, 882, 977, 1308
HpySE526I ACGT 2 cut(s) 359, 561
Hsp92II CATG 9 cut(s) 62, 229, 418, 1021, 1182, 1278, 1307, 1358, 1415
HspAI GCGC 1 cut(s) 212
Kpn2I TCCGGA 1 cut(s) 91
Kzo9I GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
LmnI GCTCC 1 cut(s) 805
Lsp1109I GCAGC 3 cut(s) 386, 789, 1009
LweI GCATC 2 cut(s) 158, 280
MaeI CTAG 1 cut(s) 1082
MaeII ACGT 2 cut(s) 359, 561
MaeIII GTNAC 6 cut(s) 221, 477, 917, 980, 1243, 1265
MalI GATC 7 cut(s) 45, 138, 261, 421, 469, 593, 784
MboI GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
MboII GAAGA 6 cut(s) 80, 395, 441, 1153, 1330, 1333
MfeI CAATTG 2 cut(s) 1280, 1401
MflI RGATCY 3 cut(s) 136, 467, 591
MhlI GDGCHC 1 cut(s) 802
MlyI GAGTC 1 cut(s) 850
MmeI TCCRAC 1 cut(s) 726
Mph1103I ATGCAT 2 cut(s) 614, 1276
MroI TCCGGA 1 cut(s) 91
MroXI GAANNNNTTC 2 cut(s) 254, 972
MslI CAYNNNNRTG 2 cut(s) 276, 795
MspCI CTTAAG 1 cut(s) 1235
MspI CCGG 2 cut(s) 92, 323
MspR9I CCNGG 2 cut(s) 774, 1217
MunI CAATTG 2 cut(s) 1280, 1401
Mva1269I GAATGC 1 cut(s) 932
MvaI CCWGG 2 cut(s) 774, 1217
MvnI CGCG 1 cut(s) 212
MwoI GCNNNNNNNGC 2 cut(s) 336, 954
NcoI CCATGG 1 cut(s) 1017
NdeII GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
NlaIII CATG 9 cut(s) 62, 229, 418, 1021, 1182, 1278, 1307, 1358, 1415
NlaIV GGNNCC 2 cut(s) 154, 1015
NmuCI GTSAC 3 cut(s) 477, 917, 980
NsiI ATGCAT 2 cut(s) 614, 1276
NspI RCATGY 4 cut(s) 229, 1182, 1307, 1358
PaeI GCATGC 2 cut(s) 1182, 1307
PaeR7I CTCGAG 1 cut(s) 1298
PagI TCATGA 2 cut(s) 58, 1411
PciI ACATGT 1 cut(s) 1354
PctI GAATGC 1 cut(s) 932
PdmI GAANNNNTTC 2 cut(s) 254, 972
PfeI GAWTC 2 cut(s) 78, 677
PflMI CCANNNNNTGG 1 cut(s) 1216
PkrI GCNGC 3 cut(s) 376, 779, 1024
PleI GAGTC 1 cut(s) 849
PpsI GAGTC 1 cut(s) 849
PscI ACATGT 1 cut(s) 1354
Psp6I CCWGG 2 cut(s) 772, 1215
PspFI CCCAGC 1 cut(s) 1087
PspGI CCWGG 2 cut(s) 772, 1215
PspN4I GGNNCC 2 cut(s) 154, 1015
PsrI GAACNNNNNNTAC 2 cut(s) 542, 574
PsuI RGATCY 3 cut(s) 136, 467, 591
RsaI GTAC 2 cut(s) 85, 643
RsaNI GTAC 2 cut(s) 84, 642
RseI CAYNNNNRTG 2 cut(s) 276, 795
SatI GCNGC 3 cut(s) 375, 778, 1023
Sau3AI GATC 7 cut(s) 43, 136, 259, 419, 467, 591, 782
ScaI AGTACT 1 cut(s) 85
SchI GAGTC 1 cut(s) 850
ScrFI CCNGG 2 cut(s) 774, 1217
SduI GDGCHC 1 cut(s) 802
SfaNI GCATC 2 cut(s) 158, 280
Sfr274I CTCGAG 1 cut(s) 1298
SlaI CTCGAG 1 cut(s) 1298
SmiMI CAYNNNNRTG 2 cut(s) 276, 795
SmlI CTYRAG 5 cut(s) 39, 553, 595, 1235, 1298
SmoI CTYRAG 5 cut(s) 39, 553, 595, 1235, 1298
SphI GCATGC 2 cut(s) 1182, 1307
SsiI CCGC 1 cut(s) 1182
SspI AATATT 2 cut(s) 815, 1060
SspMI CTAG 1 cut(s) 1082
StyD4I CCNGG 2 cut(s) 772, 1215
StyI CCWWGG 2 cut(s) 423, 1017
TaiI ACGT 2 cut(s) 362, 564
TaqI TCGA 4 cut(s) 258, 936, 1167, 1299
TatI WGTACW 1 cut(s) 83
TfiI GAWTC 2 cut(s) 78, 677
TscAI CASTG 2 cut(s) 236, 391
TseFI GTSAC 3 cut(s) 477, 917, 980
TseI GCWGC 3 cut(s) 374, 777, 1022
Tsp45I GTSAC 3 cut(s) 477, 917, 980
TspDTI ATGAA 3 cut(s) 111, 263, 1400
TspGWI ACGGA 1 cut(s) 659
TspRI CASTG 2 cut(s) 236, 391
Van91I CCANNNNNTGG 1 cut(s) 1216
Vha464I CTTAAG 1 cut(s) 1235
XapI RAATTY 3 cut(s) 761, 1120, 1312
XceI RCATGY 4 cut(s) 229, 1182, 1307, 1358
XcmI CCANNNNNNNNNTGG 1 cut(s) 430
XhoI CTCGAG 1 cut(s) 1298
XmnI GAANNNNTTC 2 cut(s) 254, 972
XspI CTAG 1 cut(s) 1082
ZrmI AGTACT 1 cut(s) 85
Zsp2I ATGCAT 2 cut(s) 614, 1276
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.