Rorug03G0137400

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000003
OG0000155
Physical Location & Seq
Forward (+)
11283568 .. 11285541
1974 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug03G0137400.1

Sequence Viewer

Length: 1323 bp
ATGAAAGCTTGCATTTTCTGCAACTCCAAACCAAACCCATGTCTAAAGTTCCAGTCTTTCCTCCTACTTCTCACTCTCACTCTCACTTCCACTCTCTGTTCCTCTCAGAGCCCCTCACTTATTTTGCCCCTCAAAACCCAGGAAATTCCCTCTGGGTCCTTCCCGAAGTCCCCAAACAAGCTCCCATTTCACCACAATGTGACCCTCACCGTCTCCGTCACCGTGGGCACGCCTCCCCAGAACGTCTCCATGGTCATCGACACCGGAAGCGAGCTCTCCTGGCTTAACTGCAACAGAACCCGAAACTTCACGTTCGACCCGACCCGGTCCAGTTCCTACAAGCCCATCCCGTGCTCCTCGCCCACCTGCACGACCCGGACCCGGGACCTATCCATACCCGCCTCCTGCGACTCCAACAAGCTCTGCCACGCCACGCTTACCTACGCCGACTTCTCGTCGTCGGAGGGATGCCTCGCCGCCGACGCGTTCTCCATCGGTAGCTCCGGAACTTCGGGTCTGGTCTTCGGGTGCATGGACTCGATCTTCGACCCGAACTCCGACGAAGACTCCAAGAACACCGGGTTAATGGGCATGAACCGCGGCTCGCTCTCTTTCGTTTCCCAAATGGCCTTTACCAAATTCTCGTACTGCATCTCGGGCTCCGATTTCTCGGGAGTCTTGCTTCTCGGGGACGCCAATTTCTCGTGGGTCGCGCCGTTGAACTACACCCCGTTGATCCAAATCTCGACGCCGTTGCCGTACTTCGACCGCGTAGCCTACACCGTCCAGCTCGAAGGCATTAAGGTCGCGAACAAGCTCCTCCCGATTCCGAAATCCGACTTCGAACCGGACCATACCGGGGCGGGTCAGACCATGGTCGACTCGGGCACCCAGTTCACTTTCCTTCTCGGGCCGGTTTACACCGCACTCCGAACCGAGTTCTTGAACCAAACCGCCCACATTCTTCGGGTTTATGAGGATCCGAACTTCGTTTTCCAAGGAGCTATGGATTTGTGTTACCGGGTCGGGTTGAACCAATCCAAACTGCCACAGTTACCTTCCGTGACGCTAATGTTTCGGGGCGCCGAGATGAAAGTGTCGGGTAATCAGTTACTGTATCGGGTACGGGGCGAGGTCAGAGGGAGTGATTCGCTGTGCTGCTTCACATTTGGAAACTCCGACCTTTTGGGTGTTGAGGCGTTTGTGATTGGTCACCATCACCAGCAGAACGTGTGGATGGAATTTGACCTCCATAACTCTCGGATCGGATTGGCTGAGGTGCAGTGTGATTTGGCGGGTCAGAAATTTGGGCTCAATGTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

440

Amino Acids

48.09

Weight (kDa)

6.14

Isoelectric Point (pI)

36.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TAXi_N PF14543 70 - 231 1.7e-38 Xylanase inhibitor N-terminal
Asp PF00026 72 - 427 2.1e-18 Eukaryotic aspartyl protease
TAXi_C PF14541 259 - 424 3.5e-33 Xylanase inhibitor C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 374
Acc36I ACCTGC 1 cut(s) 374
AccB1I GGYRCC 2 cut(s) 887, 1082
AccI GTMKAC 1 cut(s) 879
AccII CGCG 5 cut(s) 485, 600, 713, 771, 809
AccIII TCCGGA 1 cut(s) 503
AciI CCGC 9 cut(s) 399, 477, 598, 600, 769, 863, 924, 954, 1295
AclWI GGATC 4 cut(s) 730, 974, 987, 1271
AcsI RAATTY 4 cut(s) 144, 638, 1241, 1304
AcyI GRCGYC 3 cut(s) 693, 749, 1083
AdeI CACNNNGTG 1 cut(s) 199
AfaI GTAC 3 cut(s) 647, 761, 1125
AfiI CCNNNNNNNGG 3 cut(s) 381, 382, 859
AflIII ACRYGT 2 cut(s) 483, 1230
AgsI TTSAA 3 cut(s) 721, 946, 1033
AhdI GACNNNNNGTC 1 cut(s) 454
AjnI CCWGG 2 cut(s) 138, 278
AluBI AGCT 8 cut(s) 8, 181, 274, 421, 501, 790, 817, 1004
AluI AGCT 8 cut(s) 8, 181, 274, 421, 501, 790, 817, 1004
Alw21I GWGCWC 2 cut(s) 276, 356
Alw26I GTCTC 2 cut(s) 217, 250
AlwI GGATC 4 cut(s) 730, 974, 987, 1271
AlwNI CAGNNNCTG 1 cut(s) 1114
Ama87I CYCGRG 6 cut(s) 381, 655, 670, 686, 883, 908
Aor13HI TCCGGA 1 cut(s) 503
AoxI GGCC 2 cut(s) 627, 911
ApeKI GCWGC 1 cut(s) 1158
ApoI RAATTY 4 cut(s) 144, 638, 1241, 1304
ArsI GACNNNNNNTTYG 2 cut(s) 527, 559
AspLEI GCGC 2 cut(s) 715, 1085
AspS9I GGNCC 6 cut(s) 156, 327, 378, 385, 850, 911
AsuC2I CCSGG 7 cut(s) 325, 376, 382, 383, 580, 859, 1022
AsuHPI GGTGA 5 cut(s) 182, 199, 211, 1205, 1211
AsuII TTCGAA 1 cut(s) 843
AvaI CYCGRG 6 cut(s) 381, 655, 670, 686, 883, 908
AvaII GGWCC 5 cut(s) 156, 327, 378, 385, 850
BaeGI GKGCMC 2 cut(s) 230, 890
BamHI GGATCC 1 cut(s) 979
BanI GGYRCC 2 cut(s) 887, 1082
BanII GRGCYC 4 cut(s) 113, 276, 662, 1314
BauI CACGAG 1 cut(s) 703
BbsI GAAGAC 2 cut(s) 514, 570
Bbv12I GWGCWC 2 cut(s) 276, 356
BbvCI CCTCAGC 1 cut(s) 1275
BbvI GCAGC 1 cut(s) 1145
BccI CCATC 4 cut(s) 353, 500, 1224, 1231
BceAI ACGGC 3 cut(s) 700, 736, 742
BcgI CGANNNNNNTGC 4 cut(s) 736, 770, 787, 821
BciT130I CCWGG 2 cut(s) 140, 280
BcnI CCSGG 7 cut(s) 325, 376, 382, 383, 580, 859, 1022
BcoDI GTCTC 2 cut(s) 217, 250
BfoI RGCGCY 1 cut(s) 1086
BfuAI ACCTGC 1 cut(s) 374
BisI GCNGC 3 cut(s) 477, 601, 1159
BlsI GCNGC 3 cut(s) 478, 602, 1160
Bme1390I CCNGG 9 cut(s) 140, 280, 325, 376, 382, 383, 580, 859, 1022
Bme18I GGWCC 5 cut(s) 156, 327, 378, 385, 850
BmeRI GACNNNNNGTC 1 cut(s) 454
BmeT110I CYCGRG 6 cut(s) 381, 655, 670, 686, 883, 908
BmgT120I GGNCC 6 cut(s) 156, 327, 378, 385, 850, 911
BmiI GGNNCC 7 cut(s) 157, 380, 386, 661, 889, 981, 1084
BmrFI CCNGG 9 cut(s) 140, 280, 325, 376, 382, 383, 580, 859, 1022
BmrI ACTGGG 1 cut(s) 886
BmsI GCATC 2 cut(s) 458, 660
BmuI ACTGGG 1 cut(s) 886
BoxI GACNNNNGTC 1 cut(s) 875
BpiI GAAGAC 2 cut(s) 514, 570
Bpu10I CCTNAGC 1 cut(s) 1275
Bpu14I TTCGAA 1 cut(s) 843
BpuMI CCSGG 7 cut(s) 325, 376, 382, 383, 580, 859, 1022
BsaBI GATNNNNATC 1 cut(s) 740
BsaHI GRCGYC 3 cut(s) 693, 749, 1083
BsaJI CCNNGG 8 cut(s) 138, 222, 249, 381, 598, 858, 873, 997
BsaWI WCCGGW 3 cut(s) 263, 503, 847
BsaXI ACNNNNNCTCC 6 cut(s) 473, 503, 539, 551, 569, 581
Bsc4I CCNNNNNNNGG 3 cut(s) 381, 382, 859
Bse118I RCCGGY 1 cut(s) 913
Bse1I ACTGG 3 cut(s) 52, 330, 892
Bse8I GATNNNNATC 1 cut(s) 740
BseAI TCCGGA 1 cut(s) 503
BseBI CCWGG 2 cut(s) 140, 280
BseDI CCNNGG 8 cut(s) 138, 222, 249, 381, 598, 858, 873, 997
BseGI GGATG 3 cut(s) 345, 473, 1242
BseJI GATNNNNATC 1 cut(s) 740
BseLI CCNNNNNNNGG 3 cut(s) 381, 382, 859
BseMII CTCAG 2 cut(s) 119, 1266
BseNI ACTGG 3 cut(s) 52, 330, 892
BseRI GAGGAG 2 cut(s) 346, 809
BseSI GKGCMC 2 cut(s) 230, 890
BseXI GCAGC 1 cut(s) 1145
BsgI GTGCAG 2 cut(s) 352, 1301
Bsh1236I CGCG 5 cut(s) 485, 600, 713, 771, 809
Bsh1285I CGRYCG 1 cut(s) 769
BshFI GGCC 2 cut(s) 629, 913
BshNI GGYRCC 2 cut(s) 887, 1082
BsiEI CGRYCG 1 cut(s) 769
BsiHKAI GWGCWC 2 cut(s) 276, 356
BsiHKCI CYCGRG 6 cut(s) 381, 655, 670, 686, 883, 908
BslFI GGGAC 3 cut(s) 154, 398, 704
BslI CCNNNNNNNGG 3 cut(s) 381, 382, 859
BsmAI GTCTC 2 cut(s) 217, 250
BsmBI CGTCTC 2 cut(s) 217, 250
BsmFI GGGAC 3 cut(s) 154, 398, 704
BsnI GGCC 2 cut(s) 629, 913
BsoBI CYCGRG 6 cut(s) 381, 655, 670, 686, 883, 908
Bsp119I TTCGAA 1 cut(s) 843
Bsp1286I GDGCHC 7 cut(s) 113, 230, 276, 356, 662, 890, 1314
Bsp13I TCCGGA 1 cut(s) 503
Bsp143I GATC 4 cut(s) 540, 735, 979, 1263
Bsp19I CCATGG 2 cut(s) 249, 873
Bsp68I TCGCGA 1 cut(s) 809
BspACI CCGC 9 cut(s) 399, 477, 598, 600, 769, 863, 924, 954, 1295
BspANI GGCC 2 cut(s) 629, 913
BspCNI CTCAG 2 cut(s) 118, 1267
BspEI TCCGGA 1 cut(s) 503
BspFNI CGCG 5 cut(s) 485, 600, 713, 771, 809
BspLI GGNNCC 7 cut(s) 157, 380, 386, 661, 889, 981, 1084
BspMI ACCTGC 1 cut(s) 374
BspPI GGATC 4 cut(s) 730, 974, 987, 1271
BspT104I TTCGAA 1 cut(s) 843
BspT107I GGYRCC 2 cut(s) 887, 1082
BsrFI RCCGGY 1 cut(s) 913
BsrI ACTGG 3 cut(s) 52, 330, 892
BssAI RCCGGY 1 cut(s) 913
BssECI CCNNGG 8 cut(s) 138, 222, 249, 381, 598, 858, 873, 997
BssMI GATC 4 cut(s) 540, 735, 979, 1263
BssNI GRCGYC 3 cut(s) 693, 749, 1083
BssSI CACGAG 1 cut(s) 703
BssT1I CCWWGG 3 cut(s) 249, 873, 997
Bst2BI CACGAG 1 cut(s) 703
Bst2UI CCWGG 2 cut(s) 140, 280
Bst4CI ACNGT 5 cut(s) 211, 223, 784, 1053, 1116
BstACI GRCGYC 3 cut(s) 693, 749, 1083
BstAPI GCANNNNNTGC 1 cut(s) 18
BstBI TTCGAA 1 cut(s) 843
BstC8I GCNNGC 4 cut(s) 10, 230, 272, 605
BstDEI CTNAG 2 cut(s) 105, 1275
BstDSI CCRYGG 4 cut(s) 222, 249, 598, 873
BstEII GGTNACC 1 cut(s) 1211
BstF5I GGATG 3 cut(s) 345, 473, 1242
BstFNI CGCG 5 cut(s) 485, 600, 713, 771, 809
BstH2I RGCGCY 1 cut(s) 1086
BstHHI GCGC 2 cut(s) 715, 1085
BstKTI GATC 4 cut(s) 543, 738, 982, 1266
BstMAI GTCTC 2 cut(s) 217, 250
BstMBI GATC 4 cut(s) 540, 735, 979, 1263
BstMCI CGRYCG 1 cut(s) 769
BstMWI GCNNNNNNNGC 5 cut(s) 18, 280, 482, 597, 657
BstNI CCWGG 2 cut(s) 140, 280
BstPAI GACNNNNGTC 1 cut(s) 875
BstPI GGTNACC 1 cut(s) 1211
BstSCI CCNGG 9 cut(s) 138, 278, 323, 374, 380, 381, 578, 857, 1020
BstSLI GKGCMC 2 cut(s) 230, 890
BstUI CGCG 5 cut(s) 485, 600, 713, 771, 809
BstV1I GCAGC 1 cut(s) 1145
BstV2I GAAGAC 2 cut(s) 514, 570
BstX2I RGATCY 1 cut(s) 979
BstYI RGATCY 1 cut(s) 979
BsuRI GGCC 2 cut(s) 629, 913
BtgI CCRYGG 4 cut(s) 222, 249, 598, 873
BtsCI GGATG 3 cut(s) 345, 473, 1242
BtsI GCAGTG 1 cut(s) 1289
BtsIMutI CAGTG 1 cut(s) 1289
BtuMI TCGCGA 1 cut(s) 809
BveI ACCTGC 1 cut(s) 374
Cac8I GCNNGC 4 cut(s) 10, 230, 272, 605
CaiI CAGNNNCTG 1 cut(s) 1114
CfoI GCGC 2 cut(s) 715, 1085
Cfr10I RCCGGY 1 cut(s) 913
Cfr13I GGNCC 6 cut(s) 156, 327, 378, 385, 850, 911
Cfr42I CCGCGG 1 cut(s) 601
Cfr9I CCCGGG 1 cut(s) 381
CseI GACGC 4 cut(s) 491, 701, 757, 1075
Csp6I GTAC 3 cut(s) 646, 760, 1124
CviAII CATG 5 cut(s) 39, 250, 532, 592, 874
CviQI GTAC 3 cut(s) 646, 760, 1124
DdeI CTNAG 2 cut(s) 105, 1275
DinI GGCGCC 1 cut(s) 1084
DpnI GATC 4 cut(s) 542, 737, 981, 1265
DpnII GATC 4 cut(s) 540, 735, 979, 1263
DraIII CACNNNGTG 1 cut(s) 199
DriI GACNNNNNGTC 1 cut(s) 454
Eam1105I GACNNNNNGTC 1 cut(s) 454
Ecl136II GAGCTC 1 cut(s) 274
Eco130I CCWWGG 3 cut(s) 249, 873, 997
Eco24I GRGCYC 4 cut(s) 113, 276, 662, 1314
Eco47I GGWCC 5 cut(s) 156, 327, 378, 385, 850
Eco53kI GAGCTC 1 cut(s) 274
Eco88I CYCGRG 6 cut(s) 381, 655, 670, 686, 883, 908
Eco91I GGTNACC 1 cut(s) 1211
EcoICRI GAGCTC 1 cut(s) 274
EcoO109I RGGNCCY 2 cut(s) 156, 385
EcoO65I GGTNACC 1 cut(s) 1211
EcoRII CCWGG 2 cut(s) 138, 278
EcoT14I CCWWGG 3 cut(s) 249, 873, 997
EcoT38I GRGCYC 4 cut(s) 113, 276, 662, 1314
EgeI GGCGCC 1 cut(s) 1084
EheI GGCGCC 1 cut(s) 1084
ErhI CCWWGG 3 cut(s) 249, 873, 997
Esp3I CGTCTC 2 cut(s) 217, 250
FaeI CATG 5 cut(s) 42, 253, 535, 595, 877
FaqI GGGAC 3 cut(s) 154, 398, 704
FatI CATG 5 cut(s) 38, 249, 531, 591, 873
FauI CCCGC 3 cut(s) 406, 856, 1288
FblI GTMKAC 1 cut(s) 879
Fnu4HI GCNGC 3 cut(s) 477, 601, 1159
FokI GGATG 3 cut(s) 332, 480, 1249
FriOI GRGCYC 4 cut(s) 113, 276, 662, 1314
Fsp4HI GCNGC 3 cut(s) 477, 601, 1159
GlaI GCGC 2 cut(s) 714, 1084
GluI GCNGC 3 cut(s) 477, 601, 1159
HaeII RGCGCY 1 cut(s) 1086
HaeIII GGCC 2 cut(s) 629, 913
HgaI GACGC 4 cut(s) 491, 701, 757, 1075
HhaI GCGC 2 cut(s) 715, 1085
Hin1I GRCGYC 3 cut(s) 693, 749, 1083
Hin1II CATG 5 cut(s) 42, 253, 535, 595, 877
Hin6I GCGC 2 cut(s) 713, 1083
HinP1I GCGC 2 cut(s) 713, 1083
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HindIII AAGCTT 1 cut(s) 6
HinfI GANTC 7 cut(s) 410, 536, 566, 675, 826, 881, 1148
HphI GGTGA 5 cut(s) 182, 199, 211, 1205, 1211
Hpy166II GTNNAC 3 cut(s) 880, 897, 919
Hpy188III TCNNGA 7 cut(s) 163, 504, 672, 745, 808, 823, 943
Hpy8I GTNNAC 3 cut(s) 880, 897, 919
Hpy99I CGWCG 5 cut(s) 460, 463, 485, 563, 751
HpyAV CCTTC 4 cut(s) 169, 788, 914, 1068
HpyCH4III ACNGT 5 cut(s) 211, 223, 784, 1053, 1116
HpyCH4IV ACGT 3 cut(s) 243, 311, 1230
HpyCH4V TGCA 7 cut(s) 12, 21, 291, 369, 531, 651, 1282
HpyF10VI GCNNNNNNNGC 5 cut(s) 18, 280, 482, 597, 657
HpyF3I CTNAG 2 cut(s) 105, 1275
HpySE526I ACGT 3 cut(s) 243, 311, 1230
Hsp92I GRCGYC 3 cut(s) 693, 749, 1083
Hsp92II CATG 5 cut(s) 42, 253, 535, 595, 877
HspAI GCGC 2 cut(s) 713, 1083
KasI GGCGCC 1 cut(s) 1082
Kpn2I TCCGGA 1 cut(s) 503
KspI CCGCGG 1 cut(s) 601
Kzo9I GATC 4 cut(s) 540, 735, 979, 1263
LmnI GCTCC 6 cut(s) 186, 359, 506, 665, 822, 1001
Lsp1109I GCAGC 1 cut(s) 1145
LweI GCATC 2 cut(s) 458, 660
MaeII ACGT 3 cut(s) 243, 311, 1230
MaeIII GTNAC 7 cut(s) 199, 217, 1016, 1053, 1063, 1110, 1211
MalI GATC 4 cut(s) 542, 737, 981, 1265
MboI GATC 4 cut(s) 540, 735, 979, 1263
MboII GAAGA 4 cut(s) 514, 535, 575, 956
MflI RGATCY 1 cut(s) 979
MhlI GDGCHC 7 cut(s) 113, 230, 276, 356, 662, 890, 1314
MluCI AATT 5 cut(s) 144, 638, 697, 1241, 1304
MluI ACGCGT 1 cut(s) 483
Mly113I GGCGCC 1 cut(s) 1083
MlyI GAGTC 5 cut(s) 404, 530, 560, 684, 875
MmeI TCCRAC 5 cut(s) 438, 441, 582, 861, 1203
MroI TCCGGA 1 cut(s) 503
MseI TTAA 3 cut(s) 285, 584, 801
MslI CAYNNNNRTG 1 cut(s) 195
MspA1I CMGCKG 1 cut(s) 600
MspR9I CCNGG 9 cut(s) 140, 280, 325, 376, 382, 383, 580, 859, 1022
MvaI CCWGG 2 cut(s) 140, 280
MvnI CGCG 5 cut(s) 485, 600, 713, 771, 809
MwoI GCNNNNNNNGC 5 cut(s) 18, 280, 482, 597, 657
NarI GGCGCC 1 cut(s) 1083
NciI CCSGG 7 cut(s) 325, 376, 382, 383, 580, 859, 1022
NcoI CCATGG 2 cut(s) 249, 873
NdeII GATC 4 cut(s) 540, 735, 979, 1263
NlaIII CATG 5 cut(s) 42, 253, 535, 595, 877
NlaIV GGNNCC 7 cut(s) 157, 380, 386, 661, 889, 981, 1084
NmeAIII GCCGAG 1 cut(s) 1111
NmuCI GTSAC 4 cut(s) 199, 217, 1063, 1211
NruI TCGCGA 1 cut(s) 809
NspV TTCGAA 1 cut(s) 843
PaqCI CACCTGC 1 cut(s) 374
PcsI WCGNNNNNNNCGW 2 cut(s) 317, 755
PfeI GAWTC 2 cut(s) 826, 1148
PflFI GACNNNGTC 1 cut(s) 325
PkrI GCNGC 3 cut(s) 478, 602, 1160
PleI GAGTC 5 cut(s) 404, 530, 560, 683, 875
PluTI GGCGCC 1 cut(s) 1086
PpsI GAGTC 5 cut(s) 404, 530, 560, 683, 875
PpuMI RGGWCCY 2 cut(s) 156, 385
PshAI GACNNNNGTC 1 cut(s) 875
Psp124BI GAGCTC 1 cut(s) 276
Psp5II RGGWCCY 2 cut(s) 156, 385
Psp6I CCWGG 2 cut(s) 138, 278
PspEI GGTNACC 1 cut(s) 1211
PspGI CCWGG 2 cut(s) 138, 278
PspN4I GGNNCC 7 cut(s) 157, 380, 386, 661, 889, 981, 1084
PspPI GGNCC 6 cut(s) 156, 327, 378, 385, 850, 911
PspPPI RGGWCCY 2 cut(s) 156, 385
PstNI CAGNNNCTG 1 cut(s) 1114
PsuI RGATCY 1 cut(s) 979
PsyI GACNNNGTC 1 cut(s) 325
RruI TCGCGA 1 cut(s) 809
RsaI GTAC 3 cut(s) 647, 761, 1125
RsaNI GTAC 3 cut(s) 646, 760, 1124
RseI CAYNNNNRTG 1 cut(s) 195
SacI GAGCTC 1 cut(s) 276
SacII CCGCGG 1 cut(s) 601
SalI GTCGAC 1 cut(s) 878
SaqAI TTAA 3 cut(s) 285, 584, 801
SatI GCNGC 3 cut(s) 477, 601, 1159
Sau3AI GATC 4 cut(s) 540, 735, 979, 1263
Sau96I GGNCC 6 cut(s) 156, 327, 378, 385, 850, 911
SchI GAGTC 5 cut(s) 404, 530, 560, 684, 875
ScrFI CCNGG 9 cut(s) 140, 280, 325, 376, 382, 383, 580, 859, 1022
SduI GDGCHC 7 cut(s) 113, 230, 276, 356, 662, 890, 1314
SfaNI GCATC 2 cut(s) 458, 660
SfoI GGCGCC 1 cut(s) 1084
Sfr303I CCGCGG 1 cut(s) 601
SfuI TTCGAA 1 cut(s) 843
SgrBI CCGCGG 1 cut(s) 601
SinI GGWCC 5 cut(s) 156, 327, 378, 385, 850
SmaI CCCGGG 1 cut(s) 383
SmiMI CAYNNNNRTG 1 cut(s) 195
Sse9I AATT 5 cut(s) 144, 638, 697, 1241, 1304
SsiI CCGC 9 cut(s) 399, 477, 598, 600, 769, 863, 924, 954, 1295
SspDI GGCGCC 1 cut(s) 1082
SstI GAGCTC 1 cut(s) 276
StyD4I CCNGG 9 cut(s) 138, 278, 323, 374, 380, 381, 578, 857, 1020
StyI CCWWGG 3 cut(s) 249, 873, 997
TaaI ACNGT 5 cut(s) 211, 223, 784, 1053, 1116
TaiI ACGT 3 cut(s) 246, 314, 1233
TaqI TCGA 9 cut(s) 258, 315, 539, 546, 746, 765, 792, 843, 879
TasI AATT 5 cut(s) 144, 638, 697, 1241, 1304
TauI GCSGC 2 cut(s) 479, 603
TfiI GAWTC 2 cut(s) 826, 1148
Tru1I TTAA 3 cut(s) 285, 584, 801
Tru9I TTAA 3 cut(s) 285, 584, 801
TscAI CASTG 1 cut(s) 1289
TseFI GTSAC 4 cut(s) 199, 217, 1063, 1211
TseI GCWGC 1 cut(s) 1158
Tsp45I GTSAC 4 cut(s) 199, 217, 1063, 1211
TspDTI ATGAA 3 cut(s) 17, 608, 1106
TspGWI ACGGA 2 cut(s) 205, 1051
TspMI CCCGGG 1 cut(s) 381
TspRI CASTG 1 cut(s) 1289
Tth111I GACNNNGTC 1 cut(s) 325
VpaK11BI GGWCC 5 cut(s) 156, 327, 378, 385, 850
XapI RAATTY 4 cut(s) 144, 638, 1241, 1304
XmaI CCCGGG 1 cut(s) 381
XmiI GTMKAC 1 cut(s) 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.