FvH4_6g33960

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0000155
Physical Location & Seq
Forward (+)
26879064 .. 26881115
2052 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g33960.t1

Sequence Viewer

Length: 1515 bp
ATGGAAGACGGGAGGAAGCGCAAGTTATTGGCCACTGCAAGTTGTCAAGGTCTTGCTAGTGATTGTTTGATGGATAGACTGAGTGAACTTCCGGAAGAAGTTGCTCATCACATTCTTTCTTTCCTTGAAATTAAAGACCTTACTTGTTTTGGTTGTGTGTCCAAAAGATGCCGAAAACTTTACCTGTCCACTCCGTCATTGAAATTTGATGGATTTTTTAGCAAGCAGTTACAGAGATATGATGAGAGGTTGAGATTGTGGAGTTATTTGGATAACTACTTGTTTCATCGTTGGGTTAGTAGGATCCAGCGCTTTCATTTTCACTGGGTACTTCACAGTTATGGCAGCCAACAAATCTTACAGGAAGATGAGAAGTTTCGTTTGGATAAATTTATCTGCAATGCCATCAAATGTAATGTTGAAGTCCTTGATATTAAAATCAAGAGCTGGGGCTCAGGGGCACCCTTACCTACTTGCGTCTTACATAGTGGATCTTTGAAATCTCTGTCGGTGTATATCTATGGTAGGATTATTAAAGCACCCTCACTCGCTTCTTTCTCTAATCTGGAATGCCTCAAGTTGGAAGGTACTGTTCTAGTAGATGACGGGCTTTTCAATTGGATCTCGTGTTCATGCAAATGCATCAAGGAATTATCCCTTAAATCAGTCTCCATGTATAATGCAACGTCATCCTGCAATGTCACCATTGAAAGCTCATCTTTGGAATCACTGTGCATTGAAAGGCTTAGTTTTATCCATCATCTTTACATTGCCGGTGAGAAACTTGAACAGATAATTATCGACTGGCGTTTTGGCTTTAGGTCAGACAAACCACATACGGATAAATCATTAGGTATCTGTGCACCAAATCTCAACAGTTTAAACTGGAGGGGGAGTTTGATGAATCAACCTAACCTTGGAAGATTAGAATGTTTAGAAGAAGCTAGTATCTGTCTTCTGCCTAGTGTTGATGAGTTTGTCTATGTATCCGAGGTTCTTTCCTGCTTATCAAGTGCTAAAGTTCTTACACTGAACAAAGAGACCACGATGGCTCTGTTCAAGGGAGGTTCCATGCCATTGCTAGAGAATGTTTGGTACCTGTGTATTCATATTGAAGGCTTTCTTGATTTTCAAGTCCCGGCAATGGCCTCTCTTTTGGGAGGAATGTCTAAGTTGAATACGTTAATCATAAAGTCGGACTCATTCTTCCGTGGCCCTAAAGCTGAATGCTGTGGGTTTAATATAGGATACTGGAAGCTCCAAAACGCTGCTTTTATTTATCAGCTCAAGGAGGTTACCGTAGAGCTTTCTCATGGATCAAACGGAATTGAGTTTGACAGATATATCCTTGACCATGCTCAGAATTTGAATAAAATGACAATTGTGCATTCACCACAGCAGTCCAGTGCTATGAGTGAGTTAAAGAAAAGCAAGATGGCTTCCAACATCACACTTGTCTTTCAGGAAGATCAAGAAAGAGGACCCCAGAATCGAACAAGAAGAAGGGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

505

Amino Acids

57.32

Weight (kDa)

8.27

Isoelectric Point (pI)

48.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 27 - 60 1.2e-07 F-box domain
F-box-like PF12937 28 - 60 2.5e-06 F-box-like
LRR_At5g56370 PF24758 136 - 295 1.2e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1095
AccB1I GGYRCC 2 cut(s) 460, 1095
AccIII TCCGGA 1 cut(s) 91
AclWI GGATC 5 cut(s) 298, 311, 499, 629, 1324
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 3 cut(s) 203, 389, 1363
AfaI GTAC 3 cut(s) 330, 589, 1097
AfeI AGCGCT 1 cut(s) 311
AfiI CCNNNNNNNGG 3 cut(s) 580, 917, 1144
AjuI GAANNNNNNNTTGG 2 cut(s) 365, 397
AloI GAACNNNNNNTCC 2 cut(s) 613, 645
AluBI AGCT 7 cut(s) 447, 714, 944, 1223, 1258, 1285, 1306
AluI AGCT 7 cut(s) 447, 714, 944, 1223, 1258, 1285, 1306
Alw21I GWGCWC 1 cut(s) 865
Alw26I GTCTC 2 cut(s) 673, 1034
Alw44I GTGCAC 1 cut(s) 861
AlwI GGATC 5 cut(s) 298, 311, 499, 629, 1324
Aor13HI TCCGGA 1 cut(s) 91
Aor51HI AGCGCT 1 cut(s) 311
AoxI GGCC 3 cut(s) 30, 1146, 1213
ApaLI GTGCAC 1 cut(s) 861
ApeKI GCWGC 2 cut(s) 345, 1268
ApoI RAATTY 3 cut(s) 203, 389, 1363
ArsI GACNNNNNNTTYG 2 cut(s) 794, 826
Asp700I GAANNNNTTC 1 cut(s) 1119
Asp718I GGTACC 1 cut(s) 1095
AspLEI GCGC 2 cut(s) 21, 312
AspS9I GGNCC 2 cut(s) 1214, 1481
AsuC2I CCSGG 1 cut(s) 1139
AsuHPI GGTGA 3 cut(s) 694, 788, 1383
AvaII GGWCC 1 cut(s) 1481
BaeGI GKGCMC 2 cut(s) 463, 865
BaeI ACNNNNGTAYC 2 cut(s) 1087, 1120
BalI TGGCCA 1 cut(s) 32
BamHI GGATCC 1 cut(s) 303
BanI GGYRCC 2 cut(s) 460, 1095
BanII GRGCYC 1 cut(s) 455
BauI CACGAG 1 cut(s) 625
BbsI GAAGAC 2 cut(s) 12, 947
Bbv12I GWGCWC 1 cut(s) 865
BbvI GCAGC 2 cut(s) 357, 1255
BccI CCATC 6 cut(s) 64, 203, 413, 765, 1042, 1429
BciVI GTATCC 2 cut(s) 997, 1241
BcnI CCSGG 1 cut(s) 1139
BcoDI GTCTC 2 cut(s) 673, 1034
BfaI CTAG 5 cut(s) 57, 596, 945, 963, 1082
BfoI RGCGCY 1 cut(s) 313
BfuI GTATCC 2 cut(s) 997, 1241
BisI GCNGC 2 cut(s) 346, 1269
BlsI GCNGC 2 cut(s) 347, 1270
Bme1390I CCNGG 1 cut(s) 1139
Bme18I GGWCC 1 cut(s) 1481
BmgT120I GGNCC 2 cut(s) 1214, 1481
BmiI GGNNCC 5 cut(s) 305, 462, 1069, 1097, 1483
BmrFI CCNGG 1 cut(s) 1139
BmrI ACTGGG 1 cut(s) 334
BmsI GCATC 2 cut(s) 158, 651
BmuI ACTGGG 1 cut(s) 334
BpiI GAAGAC 2 cut(s) 12, 947
BpmI CTGGAG 1 cut(s) 907
Bpu10I CCTNAGC 1 cut(s) 454
BpuEI CTTGAG 2 cut(s) 560, 1271
BpuMI CCSGG 1 cut(s) 1139
BsaBI GATNNNNATC 1 cut(s) 797
BsaI GGTCTC 1 cut(s) 1034
BsaJI CCNNGG 3 cut(s) 916, 990, 1210
BsaWI WCCGGW 1 cut(s) 91
BsaXI ACNNNNNCTCC 2 cut(s) 880, 910
Bsc4I CCNNNNNNNGG 3 cut(s) 580, 917, 1144
Bse118I RCCGGY 1 cut(s) 773
Bse1I ACTGG 5 cut(s) 329, 809, 890, 1256, 1404
Bse3DI GCAATG 5 cut(s) 406, 703, 768, 1076, 1149
Bse8I GATNNNNATC 1 cut(s) 797
BseAI TCCGGA 1 cut(s) 91
BseDI CCNNGG 3 cut(s) 916, 990, 1210
BseGI GGATG 1 cut(s) 689
BseJI GATNNNNATC 1 cut(s) 797
BseLI CCNNNNNNNGG 3 cut(s) 580, 917, 1144
BseMI GCAATG 5 cut(s) 406, 703, 768, 1076, 1149
BseMII CTCAG 3 cut(s) 71, 468, 1373
BseNI ACTGG 5 cut(s) 329, 809, 890, 1256, 1404
BseSI GKGCMC 2 cut(s) 463, 865
BseXI GCAGC 2 cut(s) 357, 1255
BseYI CCCAGC 1 cut(s) 447
BshFI GGCC 3 cut(s) 32, 1148, 1215
BshNI GGYRCC 2 cut(s) 460, 1095
BsiHKAI GWGCWC 1 cut(s) 865
BsiSI CCGG 3 cut(s) 92, 774, 1139
BslFI GGGAC 1 cut(s) 1121
BslI CCNNNNNNNGG 3 cut(s) 580, 917, 1144
BsmAI GTCTC 2 cut(s) 673, 1034
BsmFI GGGAC 1 cut(s) 1121
BsmI GAATGC 3 cut(s) 575, 1232, 1387
BsnI GGCC 3 cut(s) 32, 1148, 1215
Bso31I GGTCTC 1 cut(s) 1034
Bsp1286I GDGCHC 3 cut(s) 455, 463, 865
Bsp13I TCCGGA 1 cut(s) 91
Bsp143I GATC 5 cut(s) 303, 491, 621, 1316, 1468
BspANI GGCC 3 cut(s) 32, 1148, 1215
BspCNI CTCAG 3 cut(s) 72, 467, 1372
BspEI TCCGGA 1 cut(s) 91
BspLI GGNNCC 5 cut(s) 305, 462, 1069, 1097, 1483
BspPI GGATC 5 cut(s) 298, 311, 499, 629, 1324
BspT107I GGYRCC 2 cut(s) 460, 1095
BspTNI GGTCTC 1 cut(s) 1034
BsrDI GCAATG 5 cut(s) 406, 703, 768, 1076, 1149
BsrFI RCCGGY 1 cut(s) 773
BsrI ACTGG 5 cut(s) 329, 809, 890, 1256, 1404
BssAI RCCGGY 1 cut(s) 773
BssECI CCNNGG 3 cut(s) 916, 990, 1210
BssMI GATC 5 cut(s) 303, 491, 621, 1316, 1468
BssSI CACGAG 1 cut(s) 625
BssT1I CCWWGG 1 cut(s) 916
Bst2BI CACGAG 1 cut(s) 625
Bst4CI ACNGT 5 cut(s) 338, 592, 732, 878, 1300
BstC8I GCNNGC 1 cut(s) 224
BstDEI CTNAG 5 cut(s) 80, 454, 746, 1170, 1359
BstDSI CCRYGG 1 cut(s) 1210
BstEII GGTNACC 1 cut(s) 1294
BstF5I GGATG 1 cut(s) 689
BstH2I RGCGCY 1 cut(s) 313
BstHHI GCGC 2 cut(s) 21, 312
BstKTI GATC 5 cut(s) 306, 494, 624, 1319, 1471
BstMAI GTCTC 2 cut(s) 673, 1034
BstMBI GATC 5 cut(s) 303, 491, 621, 1316, 1468
BstPI GGTNACC 1 cut(s) 1294
BstSCI CCNGG 1 cut(s) 1137
BstSLI GKGCMC 2 cut(s) 463, 865
BstV1I GCAGC 2 cut(s) 357, 1255
BstV2I GAAGAC 2 cut(s) 12, 947
BstX2I RGATCY 3 cut(s) 303, 491, 621
BstYI RGATCY 3 cut(s) 303, 491, 621
BsuI GTATCC 2 cut(s) 997, 1241
BsuRI GGCC 3 cut(s) 32, 1148, 1215
BtgI CCRYGG 1 cut(s) 1210
BtsCI GGATG 1 cut(s) 689
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 5 cut(s) 33, 322, 728, 1028, 1411
Cac8I GCNNGC 1 cut(s) 224
CfoI GCGC 2 cut(s) 21, 312
Cfr10I RCCGGY 1 cut(s) 773
Cfr13I GGNCC 2 cut(s) 1214, 1481
CseI GACGC 1 cut(s) 466
Csp6I GTAC 3 cut(s) 329, 588, 1096
CviAII CATG 5 cut(s) 633, 673, 1072, 1313, 1355
CviQI GTAC 3 cut(s) 329, 588, 1096
DdeI CTNAG 5 cut(s) 80, 454, 746, 1170, 1359
DpnI GATC 5 cut(s) 305, 493, 623, 1318, 1470
DpnII GATC 5 cut(s) 303, 491, 621, 1316, 1468
DraI TTTAAA 1 cut(s) 882
EaeI YGGCCR 1 cut(s) 30
Eco130I CCWWGG 1 cut(s) 916
Eco24I GRGCYC 1 cut(s) 455
Eco31I GGTCTC 1 cut(s) 1034
Eco47I GGWCC 1 cut(s) 1481
Eco47III AGCGCT 1 cut(s) 311
Eco91I GGTNACC 1 cut(s) 1294
EcoO109I RGGNCCY 1 cut(s) 1481
EcoO65I GGTNACC 1 cut(s) 1294
EcoT14I CCWWGG 1 cut(s) 916
EcoT22I ATGCAT 1 cut(s) 644
EcoT38I GRGCYC 1 cut(s) 455
ErhI CCWWGG 1 cut(s) 916
FaeI CATG 5 cut(s) 636, 676, 1075, 1316, 1358
FalI AAGNNNNNCTT 4 cut(s) 703, 735, 1107, 1139
FaqI GGGAC 1 cut(s) 1121
FatI CATG 5 cut(s) 632, 672, 1071, 1312, 1354
Fnu4HI GCNGC 2 cut(s) 346, 1269
FokI GGATG 1 cut(s) 676
FriOI GRGCYC 1 cut(s) 455
Fsp4HI GCNGC 2 cut(s) 346, 1269
FspBI CTAG 5 cut(s) 57, 596, 945, 963, 1082
GlaI GCGC 2 cut(s) 20, 311
GluI GCNGC 2 cut(s) 346, 1269
GsaI CCCAGC 1 cut(s) 451
GsuI CTGGAG 1 cut(s) 907
HaeII RGCGCY 1 cut(s) 313
HaeIII GGCC 3 cut(s) 32, 1148, 1215
HapII CCGG 3 cut(s) 92, 774, 1139
HgaI GACGC 1 cut(s) 466
HhaI GCGC 2 cut(s) 21, 312
Hin1II CATG 5 cut(s) 636, 676, 1075, 1316, 1358
Hin6I GCGC 2 cut(s) 19, 310
HinP1I GCGC 2 cut(s) 19, 310
HinfI GANTC 4 cut(s) 725, 904, 1199, 1489
HpaII CCGG 3 cut(s) 92, 774, 1139
HphI GGTGA 3 cut(s) 694, 788, 1383
Hpy166II GTNNAC 3 cut(s) 86, 189, 863
Hpy188I TCNGA 5 cut(s) 826, 991, 1198, 1362, 1514
Hpy188III TCNNGA 6 cut(s) 92, 442, 566, 1124, 1463, 1472
Hpy8I GTNNAC 3 cut(s) 86, 189, 863
HpyAV CCTTC 3 cut(s) 578, 1109, 1497
HpyCH4III ACNGT 5 cut(s) 338, 592, 732, 878, 1300
HpyCH4IV ACGT 2 cut(s) 686, 1181
HpyCH4V TGCA 9 cut(s) 38, 399, 636, 642, 683, 696, 735, 863, 1387
HpyF3I CTNAG 5 cut(s) 80, 454, 746, 1170, 1359
HpySE526I ACGT 2 cut(s) 686, 1181
Hsp92II CATG 5 cut(s) 636, 676, 1075, 1316, 1358
HspAI GCGC 2 cut(s) 19, 310
Kpn2I TCCGGA 1 cut(s) 91
KpnI GGTACC 1 cut(s) 1099
Kzo9I GATC 5 cut(s) 303, 491, 621, 1316, 1468
LmnI GCTCC 1 cut(s) 1263
Lsp1109I GCAGC 2 cut(s) 357, 1255
LweI GCATC 2 cut(s) 158, 651
MaeI CTAG 5 cut(s) 57, 596, 945, 963, 1082
MaeII ACGT 2 cut(s) 686, 1181
MaeIII GTNAC 3 cut(s) 228, 700, 1294
MalI GATC 5 cut(s) 305, 493, 623, 1318, 1470
MboI GATC 5 cut(s) 303, 491, 621, 1316, 1468
MboII GAAGA 9 cut(s) 17, 107, 377, 933, 947, 950, 1198, 1478, 1512
MfeI CAATTG 2 cut(s) 616, 1380
MflI RGATCY 3 cut(s) 303, 491, 621
MhlI GDGCHC 3 cut(s) 455, 463, 865
MlsI TGGCCA 1 cut(s) 32
MluCI AATT 9 cut(s) 129, 203, 389, 616, 650, 795, 1326, 1363, 1380
MluNI TGGCCA 1 cut(s) 32
MlyI GAGTC 1 cut(s) 1193
MmeI TCCRAC 3 cut(s) 561, 1176, 1467
Mox20I TGGCCA 1 cut(s) 32
Mph1103I ATGCAT 1 cut(s) 644
MroI TCCGGA 1 cut(s) 91
MroXI GAANNNNTTC 1 cut(s) 1119
MscI TGGCCA 1 cut(s) 32
MseI TTAA 8 cut(s) 132, 435, 534, 660, 881, 1184, 1239, 1421
MslI CAYNNNNRTG 2 cut(s) 339, 637
Msp20I TGGCCA 1 cut(s) 32
MspI CCGG 3 cut(s) 92, 774, 1139
MspR9I CCNGG 1 cut(s) 1139
MssI GTTTAAAC 1 cut(s) 882
MunI CAATTG 2 cut(s) 616, 1380
Mva1269I GAATGC 3 cut(s) 575, 1232, 1387
NciI CCSGG 1 cut(s) 1139
NdeII GATC 5 cut(s) 303, 491, 621, 1316, 1468
NlaIII CATG 5 cut(s) 636, 676, 1075, 1316, 1358
NlaIV GGNNCC 5 cut(s) 305, 462, 1069, 1097, 1483
NmuCI GTSAC 1 cut(s) 700
NsiI ATGCAT 1 cut(s) 644
PctI GAATGC 3 cut(s) 575, 1232, 1387
PdmI GAANNNNTTC 1 cut(s) 1119
PfeI GAWTC 3 cut(s) 725, 904, 1489
PkrI GCNGC 2 cut(s) 347, 1270
PleI GAGTC 1 cut(s) 1193
PmeI GTTTAAAC 1 cut(s) 882
PpsI GAGTC 1 cut(s) 1193
PpuMI RGGWCCY 1 cut(s) 1481
Psp5II RGGWCCY 1 cut(s) 1481
PspEI GGTNACC 1 cut(s) 1294
PspFI CCCAGC 1 cut(s) 447
PspN4I GGNNCC 5 cut(s) 305, 462, 1069, 1097, 1483
PspPI GGNCC 2 cut(s) 1214, 1481
PspPPI RGGWCCY 1 cut(s) 1481
PsrI GAACNNNNNNTAC 2 cut(s) 978, 1010
PsuI RGATCY 3 cut(s) 303, 491, 621
RsaI GTAC 3 cut(s) 330, 589, 1097
RsaNI GTAC 3 cut(s) 329, 588, 1096
RseI CAYNNNNRTG 2 cut(s) 339, 637
SaqAI TTAA 8 cut(s) 132, 435, 534, 660, 881, 1184, 1239, 1421
SatI GCNGC 2 cut(s) 346, 1269
Sau3AI GATC 5 cut(s) 303, 491, 621, 1316, 1468
Sau96I GGNCC 2 cut(s) 1214, 1481
SchI GAGTC 1 cut(s) 1193
ScrFI CCNGG 1 cut(s) 1139
SduI GDGCHC 3 cut(s) 455, 463, 865
SfaNI GCATC 2 cut(s) 158, 651
SinI GGWCC 1 cut(s) 1481
SmiMI CAYNNNNRTG 2 cut(s) 339, 637
SmlI CTYRAG 2 cut(s) 575, 1286
SmoI CTYRAG 2 cut(s) 575, 1286
Sse9I AATT 9 cut(s) 129, 203, 389, 616, 650, 795, 1326, 1363, 1380
SspMI CTAG 5 cut(s) 57, 596, 945, 963, 1082
StyD4I CCNGG 1 cut(s) 1137
StyI CCWWGG 1 cut(s) 916
TaaI ACNGT 5 cut(s) 338, 592, 732, 878, 1300
TaiI ACGT 2 cut(s) 689, 1184
TaqI TCGA 2 cut(s) 801, 1492
TasI AATT 9 cut(s) 129, 203, 389, 616, 650, 795, 1326, 1363, 1380
TfiI GAWTC 3 cut(s) 725, 904, 1489
Tru1I TTAA 8 cut(s) 132, 435, 534, 660, 881, 1184, 1239, 1421
Tru9I TTAA 8 cut(s) 132, 435, 534, 660, 881, 1184, 1239, 1421
TscAI CASTG 5 cut(s) 40, 329, 735, 1035, 1411
TseFI GTSAC 1 cut(s) 700
TseI GCWGC 2 cut(s) 345, 1268
Tsp45I GTSAC 1 cut(s) 700
TspDTI ATGAA 5 cut(s) 275, 305, 621, 917, 1097
TspGWI ACGGA 4 cut(s) 183, 854, 1199, 1338
TspRI CASTG 5 cut(s) 40, 329, 735, 1035, 1411
VneI GTGCAC 1 cut(s) 861
VpaK11BI GGWCC 1 cut(s) 1481
XapI RAATTY 3 cut(s) 203, 389, 1363
XmnI GAANNNNTTC 1 cut(s) 1119
XspI CTAG 5 cut(s) 57, 596, 945, 963, 1082
Zsp2I ATGCAT 1 cut(s) 644
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.