Rw7G011480

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
OG0000155
Physical Location & Seq
Reverse (-)
10774275 .. 10776079
1805 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G011480.1

Sequence Viewer

Length: 1293 bp
ATGGAACGCCAGCATAGGGTATTGGCAACTACAAGTAATCAAGGCCAAGGTGCTAGCATTGTCTGTCACATTCTTTCCTATCTCAATGCATTGGATCTCATTCGAGCGAGCAGTGTGTCAAAACGATGCAGAATGTTATATGTTTCAGTCCCGGGATTAAATTTCGATGTAAATACGCTGCCCGGAGGGAAATGCTGGTGGAAGCGATCAAAATTGTTGAATCATTTGGATAGGTTATTGATTCAACGCGAGGGTAGCAAGATAGAAAGGTTTCGTATCAGTTGGGTTATTGAAGGAGTAACTGCATGTAACTGTGAGGAGCATTGTCGAGTGATCACATGGATCTATACTGCTGTGAAGTGTAATGGAAATTTAGAGTCGCCATGTTGCACCTTCCGTTGTTCATCTTTGAGGTCCCTAACGCTGGACTTGAAGTTCTGTGTTCTTAAAGCGCCCTCAATCACCATTTGCACTAATCTCCAATCCTTACTATTAAGAAGTGTTATCATTGAGGAGGATTTTTTTAAATGGATATCGAGTTCATGCCAATGCATCAAGGAGTTAACTAGTGACTGTGTTCTAAGGCCGAACAGTATCAGCATTGAGAGCCCATCTTTGGAATCCATTCATTTTGTGTTTGTGGGTAGACGTCAACAATACGAAGACATTGATGCTCTTAGCATTTCTGGTGAAAATCTTCATCGTATACATATTGAGAATATTGACCTGAGATCTTCAGCACGCCACCATTCATTATATATTGCGGCTCCAAATCTCAAATATTTGAATTTAACTGGGAATGTTGCTCGTGGTCTATCTGTGGAGAAATTCATACATTCAGAAGAAGCTATGATATTTCTCAACCCGGGGAAGATGGTTTTGACAAAGTATTTGAAGTGGTTAGCTGCTCTATTCAAATTTGGGGAGGGATCCATGCCAGGACTATTTTACAATATCCGTCACCTCTATATCCATACCAAGGGCTTGGAGAATGACCAAGTCTCAGCACTGGTCTCTCTTCCAAGTGAAATGCCAAATTTGAGTACTTTAAACATGAAGTGTGAGCCGAATACTAGGCAATTAAAATCTGTGGAACCGACTCGTGTATCTGTGGGTAAAAAGTGGAAAGCCCTAAGCGTGGCTTGTATTGACCAACTTAAGGCGGCGACATTAGAGATTTCCTATGGAAATAATGAATTGGAGTTGGCGAGGTTCTTGTTGAAGGATGCTAAGAAGGCAGTAAACGAAGACAAGATTAATTCTACTGCCACAATTGTCTTTGAGGCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD

Protein Analysis

430

Amino Acids

48.49

Weight (kDa)

8.88

Isoelectric Point (pI)

48.33

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 124 - 283 5.9e-10 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 652
AccI GTMKAC 2 cut(s) 646, 706
AccII CGCG 1 cut(s) 249
AciI CCGC 2 cut(s) 764, 1163
AclWI GGATC 4 cut(s) 102, 350, 924, 937
AcsI RAATTY 6 cut(s) 160, 370, 787, 827, 917, 1036
AcuI CTGAAG 1 cut(s) 720
AcyI GRCGYC 1 cut(s) 649
AfaI GTAC 1 cut(s) 1045
AfiI CCNNNNNNNGG 6 cut(s) 16, 424, 616, 979, 1138, 1159
AflII CTTAAG 1 cut(s) 1157
AgsI TTSAA 8 cut(s) 220, 245, 293, 433, 787, 895, 916, 1222
AhlI ACTAGT 1 cut(s) 566
AjnI CCWGG 1 cut(s) 937
AloI GAACNNNNNNTCC 4 cut(s) 419, 451, 523, 555
AluBI AGCT 2 cut(s) 848, 905
AluI AGCT 2 cut(s) 848, 905
Alw26I GTCTC 2 cut(s) 1006, 1018
AlwI GGATC 4 cut(s) 102, 350, 924, 937
Ama87I CYCGRG 2 cut(s) 151, 865
AoxI GGCC 2 cut(s) 43, 584
ApeKI GCWGC 3 cut(s) 178, 905, 1286
ApoI RAATTY 6 cut(s) 160, 370, 787, 827, 917, 1036
ArsI GACNNNNNNTTYG 2 cut(s) 874, 906
AseI ATTAAT 1 cut(s) 1257
Asp700I GAANNNNTTC 3 cut(s) 270, 624, 696
AspLEI GCGC 1 cut(s) 454
AspS9I GGNCC 1 cut(s) 414
AsuC2I CCSGG 5 cut(s) 152, 153, 183, 866, 867
AsuHPI GGTGA 3 cut(s) 454, 701, 953
AsuNHI GCTAGC 1 cut(s) 53
AvaI CYCGRG 2 cut(s) 151, 865
AvaII GGWCC 1 cut(s) 414
BaeI ACNNNNGTAYC 2 cut(s) 1089, 1122
BamHI GGATCC 1 cut(s) 929
BanII GRGCYC 1 cut(s) 611
BauI CACGAG 2 cut(s) 807, 1101
BbsI GAAGAC 2 cut(s) 669, 1254
BbvI GCAGC 3 cut(s) 165, 892, 1273
BccI CCATC 2 cut(s) 619, 868
BciT130I CCWGG 1 cut(s) 939
BclI TGATCA 1 cut(s) 333
BcnI CCSGG 5 cut(s) 152, 153, 183, 866, 867
BcoDI GTCTC 2 cut(s) 1006, 1018
BcuI ACTAGT 1 cut(s) 566
BfaI CTAG 3 cut(s) 54, 567, 1074
BfoI RGCGCY 1 cut(s) 455
BfrI CTTAAG 1 cut(s) 1157
BglII AGATCT 1 cut(s) 731
BisI GCNGC 5 cut(s) 179, 765, 906, 1164, 1287
BlsI GCNGC 5 cut(s) 180, 766, 907, 1165, 1288
BmcAI AGTACT 1 cut(s) 1045
Bme1390I CCNGG 6 cut(s) 152, 153, 183, 866, 867, 939
Bme18I GGWCC 1 cut(s) 414
BmeT110I CYCGRG 2 cut(s) 151, 865
BmgT120I GGNCC 1 cut(s) 414
BmiI GGNNCC 4 cut(s) 416, 768, 931, 1095
BmrFI CCNGG 6 cut(s) 152, 153, 183, 866, 867, 939
BmrI ACTGGG 1 cut(s) 804
BmsI GCATC 4 cut(s) 116, 561, 661, 1216
BmtI GCTAGC 1 cut(s) 57
BmuI ACTGGG 1 cut(s) 804
BpiI GAAGAC 2 cut(s) 669, 1254
Bpu10I CCTNAGC 1 cut(s) 1133
BpuMI CCSGG 5 cut(s) 152, 153, 183, 866, 867
BsaHI GRCGYC 1 cut(s) 649
BsaI GGTCTC 1 cut(s) 1018
BsaJI CCNNGG 5 cut(s) 46, 151, 865, 866, 978
Bsc4I CCNNNNNNNGG 6 cut(s) 16, 424, 616, 979, 1138, 1159
Bse1I ACTGG 2 cut(s) 799, 1014
BseBI CCWGG 1 cut(s) 939
BseDI CCNNGG 5 cut(s) 46, 151, 865, 866, 978
BseGI GGATG 1 cut(s) 1231
BseLI CCNNNNNNNGG 6 cut(s) 16, 424, 616, 979, 1138, 1159
BseMII CTCAG 2 cut(s) 719, 1017
BseNI ACTGG 2 cut(s) 799, 1014
BseRI GAGGAG 2 cut(s) 332, 527
BseXI GCAGC 3 cut(s) 165, 892, 1273
Bsh1236I CGCG 1 cut(s) 249
BshFI GGCC 2 cut(s) 45, 586
BsiHKCI CYCGRG 2 cut(s) 151, 865
BsiSI CCGG 3 cut(s) 152, 183, 866
BslFI GGGAC 2 cut(s) 134, 400
BslI CCNNNNNNNGG 6 cut(s) 16, 424, 616, 979, 1138, 1159
BsmAI GTCTC 2 cut(s) 1006, 1018
BsmFI GGGAC 2 cut(s) 134, 400
BsnI GGCC 2 cut(s) 45, 586
Bso31I GGTCTC 1 cut(s) 1018
BsoBI CYCGRG 2 cut(s) 151, 865
Bsp1286I GDGCHC 1 cut(s) 611
Bsp143I GATC 6 cut(s) 94, 206, 333, 342, 731, 929
BspACI CCGC 2 cut(s) 764, 1163
BspANI GGCC 2 cut(s) 45, 586
BspCNI CTCAG 2 cut(s) 720, 1016
BspFNI CGCG 1 cut(s) 249
BspLI GGNNCC 4 cut(s) 416, 768, 931, 1095
BspOI GCTAGC 1 cut(s) 57
BspPI GGATC 4 cut(s) 102, 350, 924, 937
BspTI CTTAAG 1 cut(s) 1157
BspTNI GGTCTC 1 cut(s) 1018
BsrI ACTGG 2 cut(s) 799, 1014
BssECI CCNNGG 5 cut(s) 46, 151, 865, 866, 978
BssMI GATC 6 cut(s) 94, 206, 333, 342, 731, 929
BssNAI GTATAC 1 cut(s) 707
BssNI GRCGYC 1 cut(s) 649
BssSI CACGAG 2 cut(s) 807, 1101
BssT1I CCWWGG 2 cut(s) 46, 978
Bst1107I GTATAC 1 cut(s) 707
Bst2BI CACGAG 2 cut(s) 807, 1101
Bst2UI CCWGG 1 cut(s) 939
Bst4CI ACNGT 3 cut(s) 314, 575, 593
Bst6I CTCTTC 1 cut(s) 1023
BstACI GRCGYC 1 cut(s) 649
BstAFI CTTAAG 1 cut(s) 1157
BstC8I GCNNGC 4 cut(s) 11, 55, 109, 742
BstDEI CTNAG 6 cut(s) 581, 677, 728, 1003, 1133, 1230
BstF5I GGATG 1 cut(s) 1231
BstFNI CGCG 1 cut(s) 249
BstH2I RGCGCY 1 cut(s) 455
BstHHI GCGC 1 cut(s) 454
BstKTI GATC 6 cut(s) 97, 209, 336, 345, 734, 932
BstMAI GTCTC 2 cut(s) 1006, 1018
BstMBI GATC 6 cut(s) 94, 206, 333, 342, 731, 929
BstMWI GCNNNNNNNGC 3 cut(s) 255, 606, 1235
BstNI CCWGG 1 cut(s) 939
BstNSI RCATGY 1 cut(s) 309
BstSCI CCNGG 6 cut(s) 150, 151, 181, 864, 865, 937
BstUI CGCG 1 cut(s) 249
BstV1I GCAGC 3 cut(s) 165, 892, 1273
BstV2I GAAGAC 2 cut(s) 669, 1254
BstX2I RGATCY 4 cut(s) 94, 342, 731, 929
BstXI CCANNNNNNTGG 1 cut(s) 985
BstYI RGATCY 4 cut(s) 94, 342, 731, 929
BstZ17I GTATAC 1 cut(s) 707
BsuRI GGCC 2 cut(s) 45, 586
BtsCI GGATG 1 cut(s) 1231
BtsI GCAGTG 1 cut(s) 118
BtsIMutI CAGTG 2 cut(s) 118, 1007
Cac8I GCNNGC 4 cut(s) 11, 55, 109, 742
CfoI GCGC 1 cut(s) 454
Cfr13I GGNCC 1 cut(s) 414
Cfr9I CCCGGG 2 cut(s) 151, 865
Csp6I GTAC 1 cut(s) 1044
CviAII CATG 6 cut(s) 306, 339, 384, 543, 934, 1054
CviQI GTAC 1 cut(s) 1044
DdeI CTNAG 6 cut(s) 581, 677, 728, 1003, 1133, 1230
DpnI GATC 6 cut(s) 96, 208, 335, 344, 733, 931
DpnII GATC 6 cut(s) 94, 206, 333, 342, 731, 929
DraI TTTAAA 2 cut(s) 526, 1050
Eam1104I CTCTTC 1 cut(s) 1023
EarI CTCTTC 1 cut(s) 1023
Eco130I CCWWGG 2 cut(s) 46, 978
Eco24I GRGCYC 1 cut(s) 611
Eco31I GGTCTC 1 cut(s) 1018
Eco32I GATATC 1 cut(s) 534
Eco47I GGWCC 1 cut(s) 414
Eco57I CTGAAG 1 cut(s) 720
Eco88I CYCGRG 2 cut(s) 151, 865
EcoO109I RGGNCCY 1 cut(s) 414
EcoRII CCWGG 1 cut(s) 937
EcoRV GATATC 1 cut(s) 534
EcoT14I CCWWGG 2 cut(s) 46, 978
EcoT22I ATGCAT 2 cut(s) 91, 554
EcoT38I GRGCYC 1 cut(s) 611
ErhI CCWWGG 2 cut(s) 46, 978
FaeI CATG 6 cut(s) 309, 342, 387, 546, 937, 1057
FalI AAGNNNNNCTT 2 cut(s) 1126, 1158
FaqI GGGAC 2 cut(s) 134, 400
FatI CATG 6 cut(s) 305, 338, 383, 542, 933, 1053
FbaI TGATCA 1 cut(s) 333
FblI GTMKAC 2 cut(s) 646, 706
Fnu4HI GCNGC 5 cut(s) 179, 765, 906, 1164, 1287
FokI GGATG 1 cut(s) 1238
FriOI GRGCYC 1 cut(s) 611
Fsp4HI GCNGC 5 cut(s) 179, 765, 906, 1164, 1287
FspBI CTAG 3 cut(s) 54, 567, 1074
GlaI GCGC 1 cut(s) 453
GluI GCNGC 5 cut(s) 179, 765, 906, 1164, 1287
HaeII RGCGCY 1 cut(s) 455
HaeIII GGCC 2 cut(s) 45, 586
HapII CCGG 3 cut(s) 152, 183, 866
HhaI GCGC 1 cut(s) 454
Hin1I GRCGYC 1 cut(s) 649
Hin1II CATG 6 cut(s) 309, 342, 387, 546, 937, 1057
Hin6I GCGC 1 cut(s) 452
HinP1I GCGC 1 cut(s) 452
HincII GTYRAC 2 cut(s) 564, 653
HindII GTYRAC 2 cut(s) 564, 653
HinfI GANTC 5 cut(s) 220, 241, 377, 620, 1099
HpaI GTTAAC 1 cut(s) 564
HpaII CCGG 3 cut(s) 152, 183, 866
HphI GGTGA 3 cut(s) 454, 701, 953
Hpy166II GTNNAC 5 cut(s) 564, 647, 653, 707, 1243
Hpy188I TCNGA 1 cut(s) 841
Hpy8I GTNNAC 5 cut(s) 564, 647, 653, 707, 1243
HpyAV CCTTC 4 cut(s) 287, 403, 1216, 1228
HpyCH4III ACNGT 3 cut(s) 314, 575, 593
HpyCH4IV ACGT 1 cut(s) 649
HpyCH4V TGCA 6 cut(s) 89, 129, 305, 390, 471, 552
HpyF10VI GCNNNNNNNGC 3 cut(s) 255, 606, 1235
HpyF3I CTNAG 6 cut(s) 581, 677, 728, 1003, 1133, 1230
HpySE526I ACGT 1 cut(s) 649
Hsp92I GRCGYC 1 cut(s) 649
Hsp92II CATG 6 cut(s) 309, 342, 387, 546, 937, 1057
HspAI GCGC 1 cut(s) 452
Ksp22I TGATCA 1 cut(s) 333
KspAI GTTAAC 1 cut(s) 564
Kzo9I GATC 6 cut(s) 94, 206, 333, 342, 731, 929
LmnI GCTCC 2 cut(s) 319, 772
Lsp1109I GCAGC 3 cut(s) 165, 892, 1273
LweI GCATC 4 cut(s) 116, 561, 661, 1216
MaeI CTAG 3 cut(s) 54, 567, 1074
MaeII ACGT 1 cut(s) 649
MaeIII GTNAC 5 cut(s) 65, 298, 308, 569, 959
MalI GATC 6 cut(s) 96, 208, 335, 344, 733, 931
MboI GATC 6 cut(s) 94, 206, 333, 342, 731, 929
MboII GAAGA 7 cut(s) 674, 689, 726, 854, 883, 1010, 1259
MfeI CAATTG 1 cut(s) 1272
MflI RGATCY 4 cut(s) 94, 342, 731, 929
MhlI GDGCHC 1 cut(s) 611
MlyI GAGTC 2 cut(s) 386, 1093
Mph1103I ATGCAT 2 cut(s) 91, 554
MroXI GAANNNNTTC 3 cut(s) 270, 624, 696
MslI CAYNNNNRTG 1 cut(s) 547
MspCI CTTAAG 1 cut(s) 1157
MspI CCGG 3 cut(s) 152, 183, 866
MspR9I CCNGG 6 cut(s) 152, 153, 183, 866, 867, 939
MunI CAATTG 1 cut(s) 1272
MvaI CCWGG 1 cut(s) 939
MvnI CGCG 1 cut(s) 249
MwoI GCNNNNNNNGC 3 cut(s) 255, 606, 1235
NciI CCSGG 5 cut(s) 152, 153, 183, 866, 867
NdeII GATC 6 cut(s) 94, 206, 333, 342, 731, 929
NheI GCTAGC 1 cut(s) 53
NlaIII CATG 6 cut(s) 309, 342, 387, 546, 937, 1057
NlaIV GGNNCC 4 cut(s) 416, 768, 931, 1095
NmuCI GTSAC 3 cut(s) 65, 569, 959
NsiI ATGCAT 2 cut(s) 91, 554
NspI RCATGY 1 cut(s) 309
PdmI GAANNNNTTC 3 cut(s) 270, 624, 696
PfeI GAWTC 3 cut(s) 220, 241, 620
PflFI GACNNNGTC 1 cut(s) 998
PkrI GCNGC 5 cut(s) 180, 766, 907, 1165, 1288
PleI GAGTC 2 cut(s) 385, 1093
PpsI GAGTC 2 cut(s) 385, 1093
PpuMI RGGWCCY 1 cut(s) 414
PshBI ATTAAT 1 cut(s) 1257
Psp5II RGGWCCY 1 cut(s) 414
Psp6I CCWGG 1 cut(s) 937
PspGI CCWGG 1 cut(s) 937
PspN4I GGNNCC 4 cut(s) 416, 768, 931, 1095
PspPI GGNCC 1 cut(s) 414
PspPPI RGGWCCY 1 cut(s) 414
PsuI RGATCY 4 cut(s) 94, 342, 731, 929
PsyI GACNNNGTC 1 cut(s) 998
RsaI GTAC 1 cut(s) 1045
RsaNI GTAC 1 cut(s) 1044
RseI CAYNNNNRTG 1 cut(s) 547
SatI GCNGC 5 cut(s) 179, 765, 906, 1164, 1287
Sau3AI GATC 6 cut(s) 94, 206, 333, 342, 731, 929
Sau96I GGNCC 1 cut(s) 414
ScaI AGTACT 1 cut(s) 1045
SchI GAGTC 2 cut(s) 386, 1093
ScrFI CCNGG 6 cut(s) 152, 153, 183, 866, 867, 939
SduI GDGCHC 1 cut(s) 611
SfaNI GCATC 4 cut(s) 116, 561, 661, 1216
SinI GGWCC 1 cut(s) 414
SmaI CCCGGG 2 cut(s) 153, 867
SmiMI CAYNNNNRTG 1 cut(s) 547
SmlI CTYRAG 1 cut(s) 1157
SmoI CTYRAG 1 cut(s) 1157
SpeI ACTAGT 1 cut(s) 566
SsiI CCGC 2 cut(s) 764, 1163
SspI AATATT 2 cut(s) 721, 782
SspMI CTAG 3 cut(s) 54, 567, 1074
StyD4I CCNGG 6 cut(s) 150, 151, 181, 864, 865, 937
StyI CCWWGG 2 cut(s) 46, 978
TaaI ACNGT 3 cut(s) 314, 575, 593
TaiI ACGT 1 cut(s) 652
TaqI TCGA 4 cut(s) 103, 165, 328, 536
TatI WGTACW 1 cut(s) 1043
TauI GCSGC 2 cut(s) 767, 1166
TfiI GAWTC 3 cut(s) 220, 241, 620
TscAI CASTG 2 cut(s) 118, 1014
TseFI GTSAC 3 cut(s) 65, 569, 959
TseI GCWGC 3 cut(s) 178, 905, 1286
Tsp45I GTSAC 3 cut(s) 65, 569, 959
TspDTI ATGAA 8 cut(s) 393, 531, 617, 689, 741, 820, 1070, 1209
TspGWI ACGGA 2 cut(s) 386, 947
TspMI CCCGGG 2 cut(s) 151, 865
TspRI CASTG 2 cut(s) 118, 1014
Tth111I GACNNNGTC 1 cut(s) 998
Vha464I CTTAAG 1 cut(s) 1157
VpaK11BI GGWCC 1 cut(s) 414
VspI ATTAAT 1 cut(s) 1257
XapI RAATTY 6 cut(s) 160, 370, 787, 827, 917, 1036
XceI RCATGY 1 cut(s) 309
XmaI CCCGGG 2 cut(s) 151, 865
XmiI GTMKAC 2 cut(s) 646, 706
XmnI GAANNNNTTC 3 cut(s) 270, 624, 696
XspI CTAG 3 cut(s) 54, 567, 1074
ZraI GACGTC 1 cut(s) 650
ZrmI AGTACT 1 cut(s) 1045
Zsp2I ATGCAT 2 cut(s) 91, 554
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.