Rw3G017180

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0000155
Physical Location & Seq
Forward (+)
18601533 .. 18604130
2598 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G017180.1

Sequence Viewer

Length: 1422 bp
ATGAAAAAGAAATTTAGAACCCTGGAGAGGTTCAGTGATCTTCCTGACCAAGTTGCTCATCACATTCTTTCCTTTCTCACCATAAGAGACTTAACTCGGTTCGGTTCCACGTCCAAAAAATGCAGAGAGCTTTACCTGTCAGCTCCATCATTGAACTTTAAGGTAGATGCCTCCTTACGAAGCTTCATGACCAAGCGAGCTAAGTTGCTCAACTCTGTGGAAAGATACTTGCTTCAACGTGGTAATAATCCAATACTCTGCTTTCGCGTTTCTTGGGATTTCTATGAAAGTGTAAGGGCACGGTTGTGTGATGAGCAGTTTCGATTCGCCTCGTGGATCCAGAATGCTGTAAGGTGCAATGTCCAAGTGATCGAACTAGTTTTTGATCAAAATCACACTGCAGTCCGTAAGTTCCCATTGCCCTCATGCATCTGGATTTCTACTTCTCTGAGGTCCCTATTGGTAGTCTCAAGTTATGTGATTATTCAAGTGCCCTCCTTTTCTTTCTCATGTAATCTTTATTCCTTAAAGTTGAGAGGCGTAATAATAGAAGACGAGAATTTTAGCAAATGGATCTCATGTTCGTGCAAATGTCTTGAGGAATTATCGCTTGAAAATGTTCGTGGCGGAGGGTTGAAAAATCTCACTATTGAAAGCTCCTCTTTGCAATCGATCAGTTTGTTGGATAGTGGATTCTGCCATCTCAATGTCTTATGTGAGAAACTTGAAGATCTATATGTAAGTTGCAGAATTTATTCTAGTGGGACATCGTTGAATATTTCTGCTCCAAATCTCAAACACTTAAGGTGGAGGCGAATTTTGATGAATCATGCAAATGTTGGAAATTTAACGCGTTTAGAAAAAGTTGAGCTTTTTCAAGTTTTTCTATCTCCTGAAGTAGATGACTTTGACAGCCTATTGGAGGTTCTTTCTGGTATCCGCAGGGCTAAAGTTTTTAATCTAGATGGGATGACTATGAAGGCTGTGTTCAAGGAAGGTTCCATGCCATTACCATTAGATGAGATTAGTAATTTGGGCATTCATATTTACAGCTTGGATGATGACCTAGTCCCGGCAATGGTCTCTCTTCTCAGAGGAATGACTAATTTGAATACTCTCTGGATAACATCTGCCAATTTGCCAGCCAATATGCTCTACTCCAAGGTTGATGTATCTGGGTTTAATATGGGTTTTTGGAAATCCCAAGGGCTTGCTTTCGTTTCTCAACTTAAGGAGGTAAGAATAGAGCTTGCAAATGGGAGTAATGAGATCGAGTTAGCAAGGTATTTGCTGAAGCATGCTCATAATTTGAAGGAAATGGTCCTACTTTATCCGCCACAGCAGTCCCATCTTTTAAAGAAGATTATCAGAGAGAAGATTGTTTCTACTGCCAGGCTTGTCTTGCAGGAAAAGAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

473

Amino Acids

54.09

Weight (kDa)

9.2

Isoelectric Point (pI)

44.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 11 - 44 7.5e-06 F-box domain
LRR_At5g56370 PF24758 110 - 268 3.6e-11 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccII CGCG 2 cut(s) 267, 853
AciI CCGC 3 cut(s) 627, 940, 1334
AclWI GGATC 3 cut(s) 331, 344, 581
AcsI RAATTY 5 cut(s) 11, 559, 750, 816, 844
AcuI CTGAAG 2 cut(s) 915, 1313
AfiI CCNNNNNNNGG 4 cut(s) 27, 922, 1072, 1078
AflII CTTAAG 2 cut(s) 802, 1229
AflIII ACRYGT 1 cut(s) 851
AhlI ACTAGT 1 cut(s) 376
AjiI CACGTC 1 cut(s) 111
AjnI CCWGG 2 cut(s) 21, 1391
AleI CACNNNNGTG 1 cut(s) 304
AloI GAACNNNNNNTCC 2 cut(s) 565, 597
AluBI AGCT 8 cut(s) 130, 143, 183, 200, 657, 871, 1053, 1249
AluI AGCT 8 cut(s) 130, 143, 183, 200, 657, 871, 1053, 1249
Alw26I GTCTC 3 cut(s) 81, 472, 1087
AlwI GGATC 3 cut(s) 331, 344, 581
ApoI RAATTY 5 cut(s) 11, 559, 750, 816, 844
Asp700I GAANNNNTTC 2 cut(s) 618, 754
AspS9I GGNCC 2 cut(s) 453, 1321
AsuC2I CCSGG 1 cut(s) 1073
AsuHPI GGTGA 1 cut(s) 70
AvaII GGWCC 2 cut(s) 453, 1321
BaeGI GKGCMC 2 cut(s) 301, 495
BamHI GGATCC 1 cut(s) 336
BauI CACGAG 1 cut(s) 331
BbsI GAAGAC 1 cut(s) 558
BccI CCATC 4 cut(s) 154, 708, 959, 1356
BciT130I CCWGG 2 cut(s) 23, 1393
BciVI GTATCC 1 cut(s) 947
BclI TGATCA 1 cut(s) 385
BcnI CCSGG 1 cut(s) 1073
BcoDI GTCTC 3 cut(s) 81, 472, 1087
BcuI ACTAGT 1 cut(s) 376
BfaI CTAG 4 cut(s) 377, 759, 962, 1067
BfmI CTRYAG 1 cut(s) 399
BfrI CTTAAG 2 cut(s) 802, 1229
BfuI GTATCC 1 cut(s) 947
BglII AGATCT 1 cut(s) 730
Bme1390I CCNGG 3 cut(s) 23, 1073, 1393
Bme18I GGWCC 2 cut(s) 453, 1321
BmgBI CACGTC 1 cut(s) 111
BmgT120I GGNCC 2 cut(s) 453, 1321
BmiI GGNNCC 4 cut(s) 106, 338, 455, 1000
BmrFI CCNGG 3 cut(s) 23, 1073, 1393
BmsI GCATC 2 cut(s) 157, 438
BpiI GAAGAC 1 cut(s) 558
BpmI CTGGAG 1 cut(s) 44
BpuEI CTTGAG 2 cut(s) 454, 617
BpuMI CCSGG 1 cut(s) 1073
Bsa29I ATCGAT 1 cut(s) 671
BsaBI GATNNNNATC 1 cut(s) 390
BsaI GGTCTC 1 cut(s) 1087
BsaJI CCNNGG 3 cut(s) 21, 1161, 1204
Bsc4I CCNNNNNNNGG 4 cut(s) 27, 922, 1072, 1078
Bse3DI GCAATG 3 cut(s) 364, 416, 1083
Bse8I GATNNNNATC 1 cut(s) 390
BseBI CCWGG 2 cut(s) 23, 1393
BseCI ATCGAT 1 cut(s) 671
BseDI CCNNGG 3 cut(s) 21, 1161, 1204
BseGI GGATG 2 cut(s) 975, 1063
BseJI GATNNNNATC 1 cut(s) 390
BseLI CCNNNNNNNGG 4 cut(s) 27, 922, 1072, 1078
BseMI GCAATG 3 cut(s) 364, 416, 1083
BseMII CTCAG 2 cut(s) 440, 1105
BseRI GAGGAG 1 cut(s) 649
BseSI GKGCMC 2 cut(s) 301, 495
Bsh1236I CGCG 2 cut(s) 267, 853
BshVI ATCGAT 1 cut(s) 671
BsiSI CCGG 1 cut(s) 1073
BslFI GGGAC 4 cut(s) 439, 778, 1055, 1330
BslI CCNNNNNNNGG 4 cut(s) 27, 922, 1072, 1078
BsmAI GTCTC 3 cut(s) 81, 472, 1087
BsmFI GGGAC 4 cut(s) 439, 778, 1055, 1330
BsmI GAATGC 2 cut(s) 349, 1038
Bso31I GGTCTC 1 cut(s) 1087
Bsp1286I GDGCHC 2 cut(s) 301, 495
Bsp143I GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
BspACI CCGC 3 cut(s) 627, 940, 1334
BspCNI CTCAG 2 cut(s) 441, 1104
BspDI ATCGAT 1 cut(s) 671
BspFNI CGCG 2 cut(s) 267, 853
BspHI TCATGA 1 cut(s) 186
BspLI GGNNCC 4 cut(s) 106, 338, 455, 1000
BspMAI CTGCAG 1 cut(s) 403
BspPI GGATC 3 cut(s) 331, 344, 581
BspTI CTTAAG 2 cut(s) 802, 1229
BspTNI GGTCTC 1 cut(s) 1087
BsrDI GCAATG 3 cut(s) 364, 416, 1083
BssECI CCNNGG 3 cut(s) 21, 1161, 1204
BssMI GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
BssSI CACGAG 1 cut(s) 331
BssT1I CCWWGG 2 cut(s) 1161, 1204
Bst2BI CACGAG 1 cut(s) 331
Bst2UI CCWGG 2 cut(s) 23, 1393
Bst4CI ACNGT 1 cut(s) 303
Bst6I CTCTTC 1 cut(s) 1092
BstAFI CTTAAG 2 cut(s) 802, 1229
BstC8I GCNNGC 5 cut(s) 198, 1143, 1212, 1251, 1299
BstDEI CTNAG 3 cut(s) 201, 449, 1091
BstENI CCTNNNNNAGG 1 cut(s) 920
BstF5I GGATG 2 cut(s) 975, 1063
BstFNI CGCG 2 cut(s) 267, 853
BstKTI GATC 8 cut(s) 40, 339, 372, 388, 576, 675, 733, 1272
BstMAI GTCTC 3 cut(s) 81, 472, 1087
BstMBI GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
BstMWI GCNNNNNNNGC 1 cut(s) 1402
BstNI CCWGG 2 cut(s) 23, 1393
BstNSI RCATGY 1 cut(s) 1301
BstSCI CCNGG 3 cut(s) 21, 1071, 1391
BstSFI CTRYAG 1 cut(s) 399
BstSLI GKGCMC 2 cut(s) 301, 495
BstUI CGCG 2 cut(s) 267, 853
BstV2I GAAGAC 1 cut(s) 558
BstX2I RGATCY 3 cut(s) 336, 573, 730
BstYI RGATCY 3 cut(s) 336, 573, 730
Bsu15I ATCGAT 1 cut(s) 671
BsuI GTATCC 1 cut(s) 947
BsuTUI ATCGAT 1 cut(s) 671
BtrI CACGTC 1 cut(s) 111
BtsCI GGATG 2 cut(s) 975, 1063
BtsI GCAGTG 1 cut(s) 396
BtsIMutI CAGTG 2 cut(s) 40, 396
Cac8I GCNNGC 5 cut(s) 198, 1143, 1212, 1251, 1299
CciI TCATGA 1 cut(s) 186
Cfr13I GGNCC 2 cut(s) 453, 1321
ClaI ATCGAT 1 cut(s) 671
CviAII CATG 7 cut(s) 187, 426, 510, 579, 830, 1003, 1298
DdeI CTNAG 3 cut(s) 201, 449, 1091
DpnI GATC 8 cut(s) 39, 338, 371, 387, 575, 674, 732, 1271
DpnII GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
DraI TTTAAA 1 cut(s) 1356
Eam1104I CTCTTC 1 cut(s) 1092
EarI CTCTTC 1 cut(s) 1092
EciI GGCGGA 2 cut(s) 642, 1323
Eco130I CCWWGG 2 cut(s) 1161, 1204
Eco31I GGTCTC 1 cut(s) 1087
Eco47I GGWCC 2 cut(s) 453, 1321
Eco57I CTGAAG 2 cut(s) 915, 1313
EcoNI CCTNNNNNAGG 1 cut(s) 920
EcoO109I RGGNCCY 1 cut(s) 453
EcoRII CCWGG 2 cut(s) 21, 1391
EcoT14I CCWWGG 2 cut(s) 1161, 1204
EcoT22I ATGCAT 1 cut(s) 431
ErhI CCWWGG 2 cut(s) 1161, 1204
FaeI CATG 7 cut(s) 190, 429, 513, 582, 833, 1006, 1301
FalI AAGNNNNNCTT 4 cut(s) 646, 678, 855, 887
FaqI GGGAC 4 cut(s) 439, 778, 1055, 1330
FatI CATG 7 cut(s) 186, 425, 509, 578, 829, 1002, 1297
FbaI TGATCA 1 cut(s) 385
FokI GGATG 2 cut(s) 982, 1070
FspBI CTAG 4 cut(s) 377, 759, 962, 1067
GsuI CTGGAG 1 cut(s) 44
HapII CCGG 1 cut(s) 1073
Hin1II CATG 7 cut(s) 190, 429, 513, 582, 833, 1006, 1301
HindIII AAGCTT 1 cut(s) 181
HinfI GANTC 3 cut(s) 324, 693, 826
HpaII CCGG 1 cut(s) 1073
HphI GGTGA 1 cut(s) 70
Hpy188I TCNGA 3 cut(s) 450, 1094, 1370
Hpy188III TCNNGA 8 cut(s) 44, 187, 340, 433, 596, 893, 962, 1120
HpyAV CCTTC 3 cut(s) 973, 989, 1306
HpyCH4III ACNGT 1 cut(s) 303
HpyCH4IV ACGT 2 cut(s) 110, 238
HpyF10VI GCNNNNNNNGC 1 cut(s) 1402
HpyF3I CTNAG 3 cut(s) 201, 449, 1091
HpySE526I ACGT 2 cut(s) 110, 238
Hsp92II CATG 7 cut(s) 190, 429, 513, 582, 833, 1006, 1301
Ksp22I TGATCA 1 cut(s) 385
Kzo9I GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
LmnI GCTCC 3 cut(s) 148, 662, 790
LweI GCATC 2 cut(s) 157, 438
MaeI CTAG 4 cut(s) 377, 759, 962, 1067
MaeII ACGT 2 cut(s) 110, 238
MalI GATC 8 cut(s) 39, 338, 371, 387, 575, 674, 732, 1271
MboI GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
MboII GAAGA 6 cut(s) 32, 563, 740, 1079, 1372, 1387
MflI RGATCY 3 cut(s) 336, 573, 730
MhlI GDGCHC 2 cut(s) 301, 495
MluI ACGCGT 1 cut(s) 851
MmeI TCCRAC 2 cut(s) 663, 820
Mph1103I ATGCAT 1 cut(s) 431
MroXI GAANNNNTTC 2 cut(s) 618, 754
MseI TTAA 9 cut(s) 92, 159, 527, 803, 848, 957, 1182, 1230, 1355
MslI CAYNNNNRTG 4 cut(s) 304, 583, 705, 834
MspCI CTTAAG 2 cut(s) 802, 1229
MspI CCGG 1 cut(s) 1073
MspR9I CCNGG 3 cut(s) 23, 1073, 1393
Mva1269I GAATGC 2 cut(s) 349, 1038
MvaI CCWGG 2 cut(s) 23, 1393
MvnI CGCG 2 cut(s) 267, 853
MwoI GCNNNNNNNGC 1 cut(s) 1402
NciI CCSGG 1 cut(s) 1073
NdeII GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
NlaIII CATG 7 cut(s) 190, 429, 513, 582, 833, 1006, 1301
NlaIV GGNNCC 4 cut(s) 106, 338, 455, 1000
NsiI ATGCAT 1 cut(s) 431
NspI RCATGY 1 cut(s) 1301
OliI CACNNNNGTG 1 cut(s) 304
PaeI GCATGC 1 cut(s) 1301
PagI TCATGA 1 cut(s) 186
PctI GAATGC 2 cut(s) 349, 1038
PdmI GAANNNNTTC 2 cut(s) 618, 754
PfeI GAWTC 3 cut(s) 324, 693, 826
PflFI GACNNNGTC 1 cut(s) 1067
PpuMI RGGWCCY 1 cut(s) 453
Psp5II RGGWCCY 1 cut(s) 453
Psp6I CCWGG 2 cut(s) 21, 1391
PspGI CCWGG 2 cut(s) 21, 1391
PspN4I GGNNCC 4 cut(s) 106, 338, 455, 1000
PspPI GGNCC 2 cut(s) 453, 1321
PspPPI RGGWCCY 1 cut(s) 453
PstI CTGCAG 1 cut(s) 403
PsuI RGATCY 3 cut(s) 336, 573, 730
PsyI GACNNNGTC 1 cut(s) 1067
RseI CAYNNNNRTG 4 cut(s) 304, 583, 705, 834
SaqAI TTAA 9 cut(s) 92, 159, 527, 803, 848, 957, 1182, 1230, 1355
Sau3AI GATC 8 cut(s) 37, 336, 369, 385, 573, 672, 730, 1269
Sau96I GGNCC 2 cut(s) 453, 1321
ScrFI CCNGG 3 cut(s) 23, 1073, 1393
SduI GDGCHC 2 cut(s) 301, 495
SfaNI GCATC 2 cut(s) 157, 438
SfcI CTRYAG 1 cut(s) 399
SinI GGWCC 2 cut(s) 453, 1321
SmiMI CAYNNNNRTG 4 cut(s) 304, 583, 705, 834
SmlI CTYRAG 4 cut(s) 469, 596, 802, 1229
SmoI CTYRAG 4 cut(s) 469, 596, 802, 1229
SpeI ACTAGT 1 cut(s) 376
SphI GCATGC 1 cut(s) 1301
SsiI CCGC 3 cut(s) 627, 940, 1334
SspI AATATT 1 cut(s) 778
SspMI CTAG 4 cut(s) 377, 759, 962, 1067
StyD4I CCNGG 3 cut(s) 21, 1071, 1391
StyI CCWWGG 2 cut(s) 1161, 1204
TaaI ACNGT 1 cut(s) 303
TaiI ACGT 2 cut(s) 113, 241
TaqI TCGA 4 cut(s) 322, 372, 671, 1272
TfiI GAWTC 3 cut(s) 324, 693, 826
Tru1I TTAA 9 cut(s) 92, 159, 527, 803, 848, 957, 1182, 1230, 1355
Tru9I TTAA 9 cut(s) 92, 159, 527, 803, 848, 957, 1182, 1230, 1355
TscAI CASTG 2 cut(s) 40, 403
TspDTI ATGAA 6 cut(s) 17, 175, 300, 839, 992, 1031
TspGWI ACGGA 1 cut(s) 395
TspRI CASTG 2 cut(s) 40, 403
Tth111I GACNNNGTC 1 cut(s) 1067
Vha464I CTTAAG 2 cut(s) 802, 1229
VpaK11BI GGWCC 2 cut(s) 453, 1321
XagI CCTNNNNNAGG 1 cut(s) 920
XapI RAATTY 5 cut(s) 11, 559, 750, 816, 844
XbaI TCTAGA 1 cut(s) 961
XceI RCATGY 1 cut(s) 1301
XmnI GAANNNNTTC 2 cut(s) 618, 754
XspI CTAG 4 cut(s) 377, 759, 962, 1067
Zsp2I ATGCAT 1 cut(s) 431
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.