MD12G1025400.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000155
Physical Location & Seq
Forward (+)
2707953 .. 2709905
1953 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1025400.v1.1.491

Sequence Viewer

Length: 1494 bp
ATGGAACACAAACGTAAGTCATTGGCAACTGCAATTTCTCAATCTCAAGGTCCTCGTCACGAGAGATTAATAGACAGATTTAGTAATCTTCCAGAAGAAGTTGCTCATCACATTCTTTCCTCCCTCACTTTAAGAGATATCTGCCGAGTGGGCTGTGTGTCAAAAAGGTGCATGCAGTTTTATTTATCCACTCCGTCTTTGAACTTTGATGTAAGGACTTTCAGTAGGCAGAAGAGATTGAAGTTGTTAGGTTATTTGGATAGGTTCTTGAGTCAACGTGGCGATAATAAGATACAACATTTTCGTATACGTTGGTTATGTCGAGATGATGATGCAAGCAGCTATTATGATGAGTATTTTCGAGTGATCAACTGGATGTATACAGCTGCAAGTTGTAATGTTGAAGTACTTGATCTTTACTTTCCAGGTAAATATGAGCTAGGGAGACCAGTACTAGAATTACCGTCTTGCATCTTTCTCTGTCAATCTTTGAGGTCACTAATGGTGGATTTGCACGGGGATAAGCTTCTTAAAACTCCCTCCTTTGCTTGTTTCACTACTCTACAATGCCTAAAATTGAGCAGTGTTACGATAGATGAGGAGTTTTGCAAATGGATTTCATGTTCATGTAAATGCATTAAAGAGTTAGGGCTTGAATCCGTTGTTGGGATAGAAAAAATATGCATTGAAAGCTCATCTTTAGAATCATTTCGATTTGTGCCTAGTTACCGTCATGTTTGCCATCTCAATATCTCCGGGGAAAAACTTGAAAATATACAAATGTACTGGATTTATCAATCAAGCAAGCTAAATATTTTCGCTCCCAATCTTAAAAGTTTGAAATGGAAAGGGAGGGTGGCAAGTCACCTAAATCTGGAGAAGGTCATGTGTTTGGAAAAAGCTGAGATTTTTCTCCAGCCTAGGATAAGGGCTGATTTTGGCAATTTATTTGAGGCGTTTTGCAGTATTCAGAGAGTTGAAGTTCTTATGCTAAATGTAGCGACCATGAAGGCTCTAATTTGGAAGGGTTCCATGCCGGGATTATTAGCTCATGTTGGTCACTTTTGTGTGCGTGACATGAGTTTGACGGATCACCTAGTCAAAGTAATGACCTCTCTGCTTAAACGAATGCCTAACTTGCATACTTTGCACGTTGTAACCTCAAAATCTGTTTGCTGTGAATCTGGAAAGTTTGGTAGCAAATATTGGAAGCTCAAAAACCTAGCTTGTATTAATCAGCTTAAAGAAGTAACATTTGAGATTTCCAATAATGGGATGAATGAATGGGAGTTAGCAAGGTATATCATCGAGAATGCTAAGAATTTGAAGAAACTGTTCATATATTATTTGCCCAATCAGTTTACTCTCTTTAGGGAGATAACTGAAAGCGCGACGAACTCCCCAGCTACAGTTGAGTTTAAGGTATATGATAAATCCAGAAGAGTTTACAATGATGATCTTATTAGTCCTGATGTACAACAGAAGACCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box FBD

Protein Analysis

498

Amino Acids

57.61

Weight (kDa)

8.98

Isoelectric Point (pI)

45.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 27 - 59 1.1e-06 F-box domain
F-box-like PF12937 27 - 56 3.5e-07 F-box-like
LRR_At5g56370 PF24758 124 - 241 8.5e-09 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 2 cut(s) 307, 380
AccII CGCG 1 cut(s) 1391
AclWI GGATC 1 cut(s) 1098
AcsI RAATTY 1 cut(s) 1321
AfaI GTAC 4 cut(s) 408, 453, 785, 1476
AfiI CCNNNNNNNGG 3 cut(s) 666, 874, 1272
AgsI TTSAA 9 cut(s) 202, 241, 404, 656, 689, 770, 841, 980, 1327
AjnI CCWGG 1 cut(s) 424
AjuI GAANNNNNNNTTGG 2 cut(s) 648, 680
AleI CACNNNNGTG 1 cut(s) 1065
AloI GAACNNNNNNTCC 2 cut(s) 607, 639
Alw26I GTCTC 1 cut(s) 439
AlwI GGATC 1 cut(s) 1098
ApeKI GCWGC 2 cut(s) 339, 386
ApoI RAATTY 1 cut(s) 1321
AseI ATTAAT 2 cut(s) 68, 1233
Asp700I GAANNNNTTC 2 cut(s) 708, 1334
AspA2I CCTAGG 1 cut(s) 920
AspLEI GCGC 1 cut(s) 1391
AspS9I GGNCC 1 cut(s) 50
AsuC2I CCSGG 2 cut(s) 757, 1038
AsuHPI GGTGA 2 cut(s) 857, 1085
AvaII GGWCC 1 cut(s) 50
AvrII CCTAGG 1 cut(s) 920
BauI CACGAG 1 cut(s) 59
BbsI GAAGAC 1 cut(s) 1490
BbvI GCAGC 2 cut(s) 351, 373
BccI CCATC 1 cut(s) 750
BciT130I CCWGG 1 cut(s) 426
BclI TGATCA 1 cut(s) 366
BcnI CCSGG 2 cut(s) 757, 1038
BcoDI GTCTC 1 cut(s) 439
BfaI CTAG 6 cut(s) 440, 455, 723, 921, 1097, 1223
BfmI CTRYAG 1 cut(s) 1407
BglI GCCNNNNNGGC 1 cut(s) 150
BisI GCNGC 2 cut(s) 340, 387
BlnI CCTAGG 1 cut(s) 920
BlsI GCNGC 2 cut(s) 341, 388
BmcAI AGTACT 2 cut(s) 408, 453
Bme1390I CCNGG 3 cut(s) 426, 757, 1038
Bme18I GGWCC 1 cut(s) 50
BmgT120I GGNCC 1 cut(s) 50
BmiI GGNNCC 1 cut(s) 1030
BmrFI CCNGG 3 cut(s) 426, 757, 1038
BmsI GCATC 2 cut(s) 322, 480
BpiI GAAGAC 1 cut(s) 1490
BpmI CTGGAG 2 cut(s) 896, 899
BpuEI CTTGAG 2 cut(s) 30, 289
BpuMI CCSGG 2 cut(s) 757, 1038
BsaI GGTCTC 1 cut(s) 439
BsaJI CCNNGG 2 cut(s) 756, 920
Bsc4I CCNNNNNNNGG 3 cut(s) 666, 874, 1272
Bse1I ACTGG 3 cut(s) 377, 449, 791
BseBI CCWGG 1 cut(s) 426
BseDI CCNNGG 2 cut(s) 756, 920
BseGI GGATG 2 cut(s) 381, 1281
BseLI CCNNNNNNNGG 3 cut(s) 666, 874, 1272
BseMII CTCAG 1 cut(s) 894
BseNI ACTGG 3 cut(s) 377, 449, 791
BseRI GAGGAG 1 cut(s) 614
BseXI GCAGC 2 cut(s) 351, 373
BseYI CCCAGC 1 cut(s) 1402
Bsh1236I CGCG 1 cut(s) 1391
BsiSI CCGG 2 cut(s) 756, 1037
BslI CCNNNNNNNGG 3 cut(s) 666, 874, 1272
BsmAI GTCTC 1 cut(s) 439
BsmI GAATGC 2 cut(s) 1134, 1318
Bso31I GGTCTC 1 cut(s) 439
Bsp1407I TGTACA 1 cut(s) 1474
Bsp143I GATC 4 cut(s) 366, 412, 1090, 1456
BspCNI CTCAG 1 cut(s) 895
BspFNI CGCG 1 cut(s) 1391
BspLI GGNNCC 1 cut(s) 1030
BspPI GGATC 1 cut(s) 1098
BspTNI GGTCTC 1 cut(s) 439
BsrGI TGTACA 1 cut(s) 1474
BsrI ACTGG 3 cut(s) 377, 449, 791
BssECI CCNNGG 2 cut(s) 756, 920
BssMI GATC 4 cut(s) 366, 412, 1090, 1456
BssNAI GTATAC 2 cut(s) 308, 381
BssSI CACGAG 1 cut(s) 59
BssT1I CCWWGG 1 cut(s) 920
Bst1107I GTATAC 2 cut(s) 308, 381
Bst2BI CACGAG 1 cut(s) 59
Bst2UI CCWGG 1 cut(s) 426
Bst4CI ACNGT 4 cut(s) 465, 731, 1335, 1411
Bst6I CTCTTC 2 cut(s) 227, 1435
BstAPI GCANNNNNTGC 1 cut(s) 1147
BstAUI TGTACA 1 cut(s) 1474
BstC8I GCNNGC 3 cut(s) 173, 337, 806
BstDEI CTNAG 2 cut(s) 903, 1317
BstF5I GGATG 2 cut(s) 381, 1281
BstFNI CGCG 1 cut(s) 1391
BstHHI GCGC 1 cut(s) 1391
BstKTI GATC 4 cut(s) 369, 415, 1093, 1459
BstMAI GTCTC 1 cut(s) 439
BstMBI GATC 4 cut(s) 366, 412, 1090, 1456
BstMWI GCNNNNNNNGC 4 cut(s) 150, 690, 1138, 1147
BstNI CCWGG 1 cut(s) 426
BstNSI RCATGY 1 cut(s) 175
BstSCI CCNGG 3 cut(s) 424, 755, 1036
BstSFI CTRYAG 1 cut(s) 1407
BstUI CGCG 1 cut(s) 1391
BstV1I GCAGC 2 cut(s) 351, 373
BstV2I GAAGAC 1 cut(s) 1490
BstZ17I GTATAC 2 cut(s) 308, 381
BtsCI GGATG 2 cut(s) 381, 1281
BtsI GCAGTG 1 cut(s) 589
BtsIMutI CAGTG 1 cut(s) 589
Cac8I GCNNGC 3 cut(s) 173, 337, 806
CfoI GCGC 1 cut(s) 1391
Cfr13I GGNCC 1 cut(s) 50
Csp6I GTAC 4 cut(s) 407, 452, 784, 1475
CviAII CATG 9 cut(s) 172, 621, 627, 734, 886, 1006, 1033, 1052, 1078
CviQI GTAC 4 cut(s) 407, 452, 784, 1475
DdeI CTNAG 2 cut(s) 903, 1317
DpnI GATC 4 cut(s) 368, 414, 1092, 1458
DpnII GATC 4 cut(s) 366, 412, 1090, 1456
Eam1104I CTCTTC 2 cut(s) 227, 1435
EarI CTCTTC 2 cut(s) 227, 1435
Eco130I CCWWGG 1 cut(s) 920
Eco31I GGTCTC 1 cut(s) 439
Eco32I GATATC 1 cut(s) 139
Eco47I GGWCC 1 cut(s) 50
EcoO109I RGGNCCY 1 cut(s) 50
EcoRII CCWGG 1 cut(s) 424
EcoRV GATATC 1 cut(s) 139
EcoT14I CCWWGG 1 cut(s) 920
EcoT22I ATGCAT 2 cut(s) 638, 686
ErhI CCWWGG 1 cut(s) 920
FaeI CATG 9 cut(s) 175, 624, 630, 737, 889, 1009, 1036, 1055, 1081
FalI AAGNNNNNCTT 2 cut(s) 682, 714
FatI CATG 9 cut(s) 171, 620, 626, 733, 885, 1005, 1032, 1051, 1077
FbaI TGATCA 1 cut(s) 366
FblI GTMKAC 2 cut(s) 307, 380
Fnu4HI GCNGC 2 cut(s) 340, 387
FokI GGATG 2 cut(s) 388, 1288
Fsp4HI GCNGC 2 cut(s) 340, 387
FspBI CTAG 6 cut(s) 440, 455, 723, 921, 1097, 1223
GlaI GCGC 1 cut(s) 1390
GluI GCNGC 2 cut(s) 340, 387
GsaI CCCAGC 1 cut(s) 1406
GsuI CTGGAG 2 cut(s) 896, 899
HapII CCGG 2 cut(s) 756, 1037
HhaI GCGC 1 cut(s) 1391
Hin1II CATG 9 cut(s) 175, 624, 630, 737, 889, 1009, 1036, 1055, 1081
Hin6I GCGC 1 cut(s) 1389
HinP1I GCGC 1 cut(s) 1389
HincII GTYRAC 1 cut(s) 275
HindII GTYRAC 1 cut(s) 275
HindIII AAGCTT 1 cut(s) 524
HinfI GANTC 4 cut(s) 271, 656, 704, 1181
HpaII CCGG 2 cut(s) 756, 1037
HphI GGTGA 2 cut(s) 857, 1085
Hpy166II GTNNAC 5 cut(s) 275, 308, 381, 1362, 1447
Hpy188I TCNGA 1 cut(s) 972
Hpy188III TCNNGA 9 cut(s) 59, 92, 268, 323, 875, 1185, 1309, 1437, 1469
Hpy8I GTNNAC 5 cut(s) 275, 308, 381, 1362, 1447
Hpy99I CGWCG 1 cut(s) 1396
HpyAV CCTTC 3 cut(s) 874, 1003, 1018
HpyCH4III ACNGT 4 cut(s) 465, 731, 1335, 1411
HpyCH4IV ACGT 4 cut(s) 13, 277, 310, 1152
HpyF10VI GCNNNNNNNGC 4 cut(s) 150, 690, 1138, 1147
HpyF3I CTNAG 2 cut(s) 903, 1317
HpySE526I ACGT 4 cut(s) 13, 277, 310, 1152
Hsp92II CATG 9 cut(s) 175, 624, 630, 737, 889, 1009, 1036, 1055, 1081
HspAI GCGC 1 cut(s) 1389
Ksp22I TGATCA 1 cut(s) 366
Kzo9I GATC 4 cut(s) 366, 412, 1090, 1456
LmnI GCTCC 1 cut(s) 826
Lsp1109I GCAGC 2 cut(s) 351, 373
LweI GCATC 2 cut(s) 322, 480
MaeI CTAG 6 cut(s) 440, 455, 723, 921, 1097, 1223
MaeII ACGT 4 cut(s) 13, 277, 310, 1152
MaeIII GTNAC 9 cut(s) 56, 495, 586, 725, 863, 1058, 1073, 1156, 1249
MalI GATC 4 cut(s) 368, 414, 1092, 1458
MboI GATC 4 cut(s) 366, 412, 1090, 1456
MboII GAAGA 5 cut(s) 80, 107, 244, 1339, 1452
MfeI CAATTG 1 cut(s) 1489
MluCI AATT 7 cut(s) 33, 458, 575, 943, 1017, 1321, 1489
MlyI GAGTC 1 cut(s) 280
Mph1103I ATGCAT 2 cut(s) 638, 686
MroXI GAANNNNTTC 2 cut(s) 708, 1334
MseI TTAA 9 cut(s) 68, 131, 531, 639, 831, 1122, 1233, 1242, 1419
MslI CAYNNNNRTG 3 cut(s) 625, 631, 1065
MspA1I CMGCKG 1 cut(s) 386
MspI CCGG 2 cut(s) 756, 1037
MspR9I CCNGG 3 cut(s) 426, 757, 1038
MunI CAATTG 1 cut(s) 1489
Mva1269I GAATGC 2 cut(s) 1134, 1318
MvaI CCWGG 1 cut(s) 426
MvnI CGCG 1 cut(s) 1391
MwoI GCNNNNNNNGC 4 cut(s) 150, 690, 1138, 1147
NciI CCSGG 2 cut(s) 757, 1038
NdeII GATC 4 cut(s) 366, 412, 1090, 1456
NlaIII CATG 9 cut(s) 175, 624, 630, 737, 889, 1009, 1036, 1055, 1081
NlaIV GGNNCC 1 cut(s) 1030
NmeAIII GCCGAG 1 cut(s) 170
NmuCI GTSAC 5 cut(s) 56, 495, 863, 1058, 1073
NsiI ATGCAT 2 cut(s) 638, 686
NspI RCATGY 1 cut(s) 175
OliI CACNNNNGTG 1 cut(s) 1065
PaeI GCATGC 1 cut(s) 175
PctI GAATGC 2 cut(s) 1134, 1318
PdmI GAANNNNTTC 2 cut(s) 708, 1334
PfeI GAWTC 3 cut(s) 656, 704, 1181
PkrI GCNGC 2 cut(s) 341, 388
PleI GAGTC 1 cut(s) 279
PpsI GAGTC 1 cut(s) 279
PpuMI RGGWCCY 1 cut(s) 50
PshBI ATTAAT 2 cut(s) 68, 1233
Psp5II RGGWCCY 1 cut(s) 50
Psp6I CCWGG 1 cut(s) 424
PspFI CCCAGC 1 cut(s) 1402
PspGI CCWGG 1 cut(s) 424
PspN4I GGNNCC 1 cut(s) 1030
PspPI GGNCC 1 cut(s) 50
PspPPI RGGWCCY 1 cut(s) 50
PvuII CAGCTG 1 cut(s) 386
RsaI GTAC 4 cut(s) 408, 453, 785, 1476
RsaNI GTAC 4 cut(s) 407, 452, 784, 1475
RseI CAYNNNNRTG 3 cut(s) 625, 631, 1065
SaqAI TTAA 9 cut(s) 68, 131, 531, 639, 831, 1122, 1233, 1242, 1419
SatI GCNGC 2 cut(s) 340, 387
Sau3AI GATC 4 cut(s) 366, 412, 1090, 1456
Sau96I GGNCC 1 cut(s) 50
ScaI AGTACT 2 cut(s) 408, 453
SchI GAGTC 1 cut(s) 280
ScrFI CCNGG 3 cut(s) 426, 757, 1038
SfaNI GCATC 2 cut(s) 322, 480
SfcI CTRYAG 1 cut(s) 1407
SinI GGWCC 1 cut(s) 50
SmiMI CAYNNNNRTG 3 cut(s) 625, 631, 1065
SmlI CTYRAG 2 cut(s) 45, 268
SmoI CTYRAG 2 cut(s) 45, 268
SphI GCATGC 1 cut(s) 175
Sse9I AATT 7 cut(s) 33, 458, 575, 943, 1017, 1321, 1489
SspI AATATT 2 cut(s) 814, 1205
SspMI CTAG 6 cut(s) 440, 455, 723, 921, 1097, 1223
StyD4I CCNGG 3 cut(s) 424, 755, 1036
StyI CCWWGG 1 cut(s) 920
TaaI ACNGT 4 cut(s) 465, 731, 1335, 1411
TaiI ACGT 4 cut(s) 16, 280, 313, 1155
TaqI TCGA 4 cut(s) 322, 361, 712, 1308
TasI AATT 7 cut(s) 33, 458, 575, 943, 1017, 1321, 1489
TatI WGTACW 4 cut(s) 406, 451, 783, 1474
TfiI GAWTC 3 cut(s) 656, 704, 1181
Tru1I TTAA 9 cut(s) 68, 131, 531, 639, 831, 1122, 1233, 1242, 1419
Tru9I TTAA 9 cut(s) 68, 131, 531, 639, 831, 1122, 1233, 1242, 1419
TscAI CASTG 1 cut(s) 589
TseFI GTSAC 5 cut(s) 56, 495, 863, 1058, 1073
TseI GCWGC 2 cut(s) 339, 386
Tsp45I GTSAC 5 cut(s) 56, 495, 863, 1058, 1073
TspDTI ATGAA 6 cut(s) 609, 615, 1022, 1292, 1296, 1327
TspGWI ACGGA 3 cut(s) 183, 649, 1103
TspRI CASTG 1 cut(s) 589
VpaK11BI GGWCC 1 cut(s) 50
VspI ATTAAT 2 cut(s) 68, 1233
XapI RAATTY 1 cut(s) 1321
XceI RCATGY 1 cut(s) 175
XmaJI CCTAGG 1 cut(s) 920
XmiI GTMKAC 2 cut(s) 307, 380
XmnI GAANNNNTTC 2 cut(s) 708, 1334
XspI CTAG 6 cut(s) 440, 455, 723, 921, 1097, 1223
ZrmI AGTACT 2 cut(s) 408, 453
Zsp2I ATGCAT 2 cut(s) 638, 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.