MD04G1058800.v1.1

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr04
OG0000155
Physical Location & Seq
Forward (+)
7655291 .. 7658913
3623 bp
Loading structure...
UTR
Exon/CDS
Intron
MD04G1058800.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGCTATCATTCCTCAATTTTAAGGAACTCATTCGAGTGGGCAGCGTTTCCAAAAGATGCAGAGAGCTCTTTCTATCCACCCCTTCATTGGTAATTTGTTCACCAGACTCAGGAAACAAGCAGAAGCATTTGAACTTACTGGACTCTTTTGATAGATTCTTGCTTCATCGTGGGGATAGTAAGATACAACGCCTTTCTATTAGTTGGTGTATCAGTTCAGGCCTCGCCAACAAGATTTTTCGTATGATCACGTGGATCCATATTGCGGCAAGGTGTAATGTCGAAGTGCTTGATTTTGCGTTGAATGGCAAGCATATACCTGGGACATTAGAACTCCCAGCTTGCGTCTTTCTTTGTGGATCTTTGAGGTCACTATTGGTGCACATGGATACAATTCTTAAAGCGCCCTCATTTGCTTGCTCAAGTAATCTCCAATGCTTAACGTTAAAAAGTGTTACGATGGATGAAGGGTTTTGCAAATGGATCTCAAGTTCCTGCAAATGCATTAAGAAATTGCAGCTTAGTTATGTTTCAATAGAAAATATCATCATTGAAAGCTCATCTTTGGAATCATTTAGTTTGGTGGGTTCCTCTTTACGTGGCATTCGCTTATGCCATCTTAACATTTCATGTGAGAAGCTTGTAGATATACATATAGAGTTTTATAAATTTGACAGCAGCAGCAAGTCAATGAATATTTTTGCTCCAAATCTGAAGTATTTGACATGGATCGGAAGTATACTGAATTACCATAATCTTGGGAAATTAACGTGTTTAGAAAAAGCTGAGATTTTTCTGAAGCGTAAGAAAGATGACTATGACTTTGAGAAAATATTTGAGGTTCTGTGCAGCATCTGCAAGGTTAAAGATCTTATTCTAAGTGAAGATACCACACAGGCACTGTTCAGGGAAGGTTCCATGCAACTACAGTTCGATGATATTTCTTACTTGAGCTTGCATGCTGGGGGCGTGTTTGATGACCTTGTCCCGGCTATGGTCTCTCTTTTGAGAGGAATGCCTAACTTGAAAACTTTGCACATAAACTCTTACCCTCGATTCTTTGGCTCAAAATCATGCAAGTTTAATAGGAAATATTGGAAATCCCAAAACTTGGACTTTGTTCATTGTCTCGAGGTGGTCAAAATAGAGCTTTCCAACGGGTACAATGGAATGGAGTTTGCAAGGTATATTCTCGAGCATGCTCAGAATTTGAAGAAAATGGTCATACATTATCCACCTAAGCAATCATATGTTGAAAGGAGGTTACGTAAAAGCAAGATGATTTCTACTACCTCCATTGACTATCAGAAAAGAGATCTGCATAATCTACAAAGCTGGTCTGAATCTGGTACTTACTATAAGTATTTGAATCAGGGAAAGTCGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box

Protein Analysis

463

Amino Acids

52.93

Weight (kDa)

9.09

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_At5g56370 PF24758 84 - 203 3e-09 FBD-associated F-box protein At5g56370, LRR repeats
FBD PF08387 375 - 409 1.6e-06 FBD
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 666
AccB7I CCANNNNNTGG 1 cut(s) 1111
AccI GTMKAC 1 cut(s) 739
AciI CCGC 1 cut(s) 266
AclI AACGTT 1 cut(s) 443
AclWI GGATC 5 cut(s) 250, 263, 367, 491, 737
AcsI RAATTY 2 cut(s) 668, 1207
AcuI CTGAAG 2 cut(s) 734, 818
AcvI CACGTG 1 cut(s) 252
AfaI GTAC 2 cut(s) 1163, 1351
AfiI CCNNNNNNNGG 6 cut(s) 88, 110, 265, 988, 994, 1111
AflIII ACRYGT 1 cut(s) 770
AgsI TTSAA 8 cut(s) 133, 304, 534, 554, 1027, 1213, 1256, 1369
AjnI CCWGG 1 cut(s) 319
AloI GAACNNNNNNTCC 2 cut(s) 475, 507
AluBI AGCT 9 cut(s) 67, 341, 520, 558, 640, 785, 954, 1150, 1335
AluI AGCT 9 cut(s) 67, 341, 520, 558, 640, 785, 954, 1150, 1335
Alw21I GWGCWC 2 cut(s) 69, 384
Alw26I GTCTC 2 cut(s) 1003, 1133
Alw44I GTGCAC 1 cut(s) 380
AlwI GGATC 5 cut(s) 250, 263, 367, 491, 737
AlwNI CAGNNNCTG 2 cut(s) 855, 901
Ama87I CYCGRG 2 cut(s) 1130, 1193
AoxI GGCC 2 cut(s) 220, 1383
ApaLI GTGCAC 1 cut(s) 380
ApeKI GCWGC 5 cut(s) 42, 517, 678, 681, 849
ApoI RAATTY 2 cut(s) 668, 1207
ArsI GACNNNNNNTTYG 2 cut(s) 806, 838
Asp700I GAANNNNTTC 1 cut(s) 30
AspLEI GCGC 1 cut(s) 406
AsuC2I CCSGG 1 cut(s) 989
AsuHPI GGTGA 1 cut(s) 93
AvaI CYCGRG 2 cut(s) 1130, 1193
BaeGI GKGCMC 1 cut(s) 384
BamHI GGATCC 1 cut(s) 255
BanII GRGCYC 1 cut(s) 69
BbrPI CACGTG 1 cut(s) 252
Bbv12I GWGCWC 2 cut(s) 69, 384
BbvI GCAGC 5 cut(s) 54, 529, 690, 693, 861
BccI CCATC 2 cut(s) 454, 624
BciT130I CCWGG 1 cut(s) 321
BciVI GTATCC 1 cut(s) 382
BclI TGATCA 1 cut(s) 246
BcnI CCSGG 1 cut(s) 989
BcoDI GTCTC 2 cut(s) 1003, 1133
BfmI CTRYAG 1 cut(s) 926
BfoI RGCGCY 1 cut(s) 407
BfuI GTATCC 1 cut(s) 382
BglII AGATCT 2 cut(s) 868, 1315
BisI GCNGC 6 cut(s) 43, 267, 518, 679, 682, 850
BlsI GCNGC 6 cut(s) 44, 268, 519, 680, 683, 851
Bme1390I CCNGG 2 cut(s) 321, 989
BmeT110I CYCGRG 2 cut(s) 1130, 1193
BmiI GGNNCC 3 cut(s) 257, 589, 916
BmrFI CCNGG 2 cut(s) 321, 989
BmsI GCATC 2 cut(s) 47, 861
Bpu10I CCTNAGC 1 cut(s) 1239
BpuEI CTTGAG 3 cut(s) 406, 472, 970
BpuMI CCSGG 1 cut(s) 989
BsaAI YACGTR 3 cut(s) 252, 599, 1268
BsaI GGTCTC 1 cut(s) 1003
BsaJI CCNNGG 1 cut(s) 320
BsaXI ACNNNNNCTCC 2 cut(s) 1252, 1282
Bsc4I CCNNNNNNNGG 6 cut(s) 88, 110, 265, 988, 994, 1111
Bse1I ACTGG 1 cut(s) 144
BseBI CCWGG 1 cut(s) 321
BseDI CCNNGG 1 cut(s) 320
BseGI GGATG 1 cut(s) 469
BseLI CCNNNNNNNGG 6 cut(s) 88, 110, 265, 988, 994, 1111
BseMII CTCAG 3 cut(s) 123, 777, 1217
BseNI ACTGG 1 cut(s) 144
BseSI GKGCMC 1 cut(s) 384
BseXI GCAGC 5 cut(s) 54, 529, 690, 693, 861
BseYI CCCAGC 2 cut(s) 337, 962
BsgI GTGCAG 1 cut(s) 868
BshFI GGCC 2 cut(s) 222, 1385
BsiHKAI GWGCWC 2 cut(s) 69, 384
BsiHKCI CYCGRG 2 cut(s) 1130, 1193
BsiSI CCGG 1 cut(s) 989
BslFI GGGAC 2 cut(s) 337, 971
BslI CCNNNNNNNGG 6 cut(s) 88, 110, 265, 988, 994, 1111
BsmAI GTCTC 2 cut(s) 1003, 1133
BsmFI GGGAC 2 cut(s) 337, 971
BsmI GAATGC 2 cut(s) 603, 1020
BsnI GGCC 2 cut(s) 222, 1385
Bso31I GGTCTC 1 cut(s) 1003
BsoBI CYCGRG 2 cut(s) 1130, 1193
Bsp1286I GDGCHC 2 cut(s) 69, 384
Bsp143I GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
BspACI CCGC 1 cut(s) 266
BspANI GGCC 2 cut(s) 222, 1385
BspCNI CTCAG 3 cut(s) 122, 778, 1216
BspLI GGNNCC 3 cut(s) 257, 589, 916
BspPI GGATC 5 cut(s) 250, 263, 367, 491, 737
BspTNI GGTCTC 1 cut(s) 1003
BsrI ACTGG 1 cut(s) 144
BssECI CCNNGG 1 cut(s) 320
BssMI GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
BssNAI GTATAC 1 cut(s) 740
Bst1107I GTATAC 1 cut(s) 740
Bst2UI CCWGG 1 cut(s) 321
Bst4CI ACNGT 2 cut(s) 903, 930
BstAPI GCANNNNNTGC 1 cut(s) 855
BstBAI YACGTR 3 cut(s) 252, 599, 1268
BstC8I GCNNGC 6 cut(s) 311, 343, 418, 956, 960, 1200
BstDEI CTNAG 6 cut(s) 109, 521, 786, 878, 1203, 1239
BstF5I GGATG 1 cut(s) 469
BstH2I RGCGCY 1 cut(s) 407
BstHHI GCGC 1 cut(s) 406
BstKTI GATC 7 cut(s) 249, 258, 362, 486, 732, 871, 1318
BstMAI GTCTC 2 cut(s) 1003, 1133
BstMBI GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
BstMWI GCNNNNNNNGC 1 cut(s) 855
BstNI CCWGG 1 cut(s) 321
BstNSI RCATGY 2 cut(s) 962, 1202
BstSCI CCNGG 2 cut(s) 319, 987
BstSFI CTRYAG 1 cut(s) 926
BstSLI GKGCMC 1 cut(s) 384
BstSNI TACGTA 1 cut(s) 1268
BstV1I GCAGC 5 cut(s) 54, 529, 690, 693, 861
BstX2I RGATCY 5 cut(s) 255, 359, 483, 868, 1315
BstXI CCANNNNNNTGG 1 cut(s) 758
BstYI RGATCY 5 cut(s) 255, 359, 483, 868, 1315
BstZ17I GTATAC 1 cut(s) 740
BsuI GTATCC 1 cut(s) 382
BsuRI GGCC 2 cut(s) 222, 1385
BtsCI GGATG 1 cut(s) 469
BtsIMutI CAGTG 1 cut(s) 899
Cac8I GCNNGC 6 cut(s) 311, 343, 418, 956, 960, 1200
CaiI CAGNNNCTG 2 cut(s) 855, 901
CfoI GCGC 1 cut(s) 406
CseI GACGC 1 cut(s) 334
Csp6I GTAC 2 cut(s) 1162, 1350
CviAII CATG 7 cut(s) 385, 630, 726, 919, 959, 1074, 1199
CviQI GTAC 2 cut(s) 1162, 1350
DdeI CTNAG 6 cut(s) 109, 521, 786, 878, 1203, 1239
DpnI GATC 7 cut(s) 248, 257, 361, 485, 731, 870, 1317
DpnII GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
Ecl136II GAGCTC 1 cut(s) 67
Eco105I TACGTA 1 cut(s) 1268
Eco147I AGGCCT 1 cut(s) 222
Eco24I GRGCYC 1 cut(s) 69
Eco31I GGTCTC 1 cut(s) 1003
Eco53kI GAGCTC 1 cut(s) 67
Eco57I CTGAAG 2 cut(s) 734, 818
Eco72I CACGTG 1 cut(s) 252
Eco88I CYCGRG 2 cut(s) 1130, 1193
EcoICRI GAGCTC 1 cut(s) 67
EcoRII CCWGG 1 cut(s) 319
EcoT22I ATGCAT 1 cut(s) 506
EcoT38I GRGCYC 1 cut(s) 69
FaeI CATG 7 cut(s) 388, 633, 729, 922, 962, 1077, 1202
FalI AAGNNNNNCTT 2 cut(s) 547, 579
FaqI GGGAC 2 cut(s) 337, 971
FatI CATG 7 cut(s) 384, 629, 725, 918, 958, 1073, 1198
FauNDI CATATG 1 cut(s) 1249
FbaI TGATCA 1 cut(s) 246
FblI GTMKAC 1 cut(s) 739
Fnu4HI GCNGC 6 cut(s) 43, 267, 518, 679, 682, 850
FokI GGATG 1 cut(s) 476
FriOI GRGCYC 1 cut(s) 69
Fsp4HI GCNGC 6 cut(s) 43, 267, 518, 679, 682, 850
GlaI GCGC 1 cut(s) 405
GluI GCNGC 6 cut(s) 43, 267, 518, 679, 682, 850
GsaI CCCAGC 2 cut(s) 341, 966
HaeII RGCGCY 1 cut(s) 407
HaeIII GGCC 2 cut(s) 222, 1385
HapII CCGG 1 cut(s) 989
HgaI GACGC 1 cut(s) 334
HhaI GCGC 1 cut(s) 406
Hin1II CATG 7 cut(s) 388, 633, 729, 922, 962, 1077, 1202
Hin6I GCGC 1 cut(s) 404
HinP1I GCGC 1 cut(s) 404
HindIII AAGCTT 1 cut(s) 638
HinfI GANTC 7 cut(s) 107, 143, 156, 569, 1056, 1343, 1369
HpaII CCGG 1 cut(s) 989
HphI GGTGA 1 cut(s) 93
Hpy166II GTNNAC 3 cut(s) 101, 382, 740
Hpy188I TCNGA 6 cut(s) 714, 734, 798, 1206, 1308, 1342
Hpy188III TCNNGA 3 cut(s) 111, 1130, 1193
Hpy8I GTNNAC 3 cut(s) 101, 382, 740
HpyAV CCTTC 3 cut(s) 93, 461, 905
HpyCH4III ACNGT 2 cut(s) 903, 930
HpyCH4IV ACGT 5 cut(s) 251, 443, 598, 770, 1267
HpyF10VI GCNNNNNNNGC 1 cut(s) 855
HpyF3I CTNAG 6 cut(s) 109, 521, 786, 878, 1203, 1239
HpySE526I ACGT 5 cut(s) 251, 443, 598, 770, 1267
Hsp92II CATG 7 cut(s) 388, 633, 729, 922, 962, 1077, 1202
HspAI GCGC 1 cut(s) 404
Ksp22I TGATCA 1 cut(s) 246
Kzo9I GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
LmnI GCTCC 1 cut(s) 709
Lsp1109I GCAGC 5 cut(s) 54, 529, 690, 693, 861
LweI GCATC 2 cut(s) 47, 861
MaeII ACGT 5 cut(s) 251, 443, 598, 770, 1267
MaeIII GTNAC 3 cut(s) 369, 454, 1263
MalI GATC 7 cut(s) 248, 257, 361, 485, 731, 870, 1317
MboI GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
MboII GAAGA 2 cut(s) 896, 1225
MflI RGATCY 5 cut(s) 255, 359, 483, 868, 1315
MhlI GDGCHC 2 cut(s) 69, 384
MluCI AATT 8 cut(s) 16, 93, 393, 512, 668, 745, 764, 1207
MlyI GAGTC 2 cut(s) 101, 137
MmeI TCCRAC 1 cut(s) 1179
Mph1103I ATGCAT 1 cut(s) 506
MroXI GAANNNNTTC 1 cut(s) 30
MseI TTAA 9 cut(s) 21, 399, 440, 446, 507, 621, 767, 864, 1083
MslI CAYNNNNRTG 1 cut(s) 35
MspI CCGG 1 cut(s) 989
MspR9I CCNGG 2 cut(s) 321, 989
Mva1269I GAATGC 2 cut(s) 603, 1020
MvaI CCWGG 1 cut(s) 321
MwoI GCNNNNNNNGC 1 cut(s) 855
NciI CCSGG 1 cut(s) 989
NdeI CATATG 1 cut(s) 1249
NdeII GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
NlaIII CATG 7 cut(s) 388, 633, 729, 922, 962, 1077, 1202
NlaIV GGNNCC 3 cut(s) 257, 589, 916
NmuCI GTSAC 1 cut(s) 369
NsiI ATGCAT 1 cut(s) 506
NspI RCATGY 2 cut(s) 962, 1202
PaeI GCATGC 2 cut(s) 962, 1202
PaeR7I CTCGAG 2 cut(s) 1130, 1193
PceI AGGCCT 1 cut(s) 222
PctI GAATGC 2 cut(s) 603, 1020
PdmI GAANNNNTTC 1 cut(s) 30
PfeI GAWTC 5 cut(s) 156, 569, 1056, 1343, 1369
PflFI GACNNNGTC 1 cut(s) 983
PflMI CCANNNNNTGG 1 cut(s) 1111
PkrI GCNGC 6 cut(s) 44, 268, 519, 680, 683, 851
PleI GAGTC 2 cut(s) 101, 137
PmaCI CACGTG 1 cut(s) 252
PmlI CACGTG 1 cut(s) 252
PpsI GAGTC 2 cut(s) 101, 137
Ppu21I YACGTR 3 cut(s) 252, 599, 1268
PsiI TTATAA 1 cut(s) 666
Psp124BI GAGCTC 1 cut(s) 69
Psp1406I AACGTT 1 cut(s) 443
Psp6I CCWGG 1 cut(s) 319
PspCI CACGTG 1 cut(s) 252
PspFI CCCAGC 2 cut(s) 337, 962
PspGI CCWGG 1 cut(s) 319
PspN4I GGNNCC 3 cut(s) 257, 589, 916
PstNI CAGNNNCTG 2 cut(s) 855, 901
PsuI RGATCY 5 cut(s) 255, 359, 483, 868, 1315
PsyI GACNNNGTC 1 cut(s) 983
RsaI GTAC 2 cut(s) 1163, 1351
RsaNI GTAC 2 cut(s) 1162, 1350
RseI CAYNNNNRTG 1 cut(s) 35
SacI GAGCTC 1 cut(s) 69
SaqAI TTAA 9 cut(s) 21, 399, 440, 446, 507, 621, 767, 864, 1083
SatI GCNGC 6 cut(s) 43, 267, 518, 679, 682, 850
Sau3AI GATC 7 cut(s) 246, 255, 359, 483, 729, 868, 1315
SchI GAGTC 2 cut(s) 101, 137
ScrFI CCNGG 2 cut(s) 321, 989
SduI GDGCHC 2 cut(s) 69, 384
SfaNI GCATC 2 cut(s) 47, 861
SfcI CTRYAG 1 cut(s) 926
Sfr274I CTCGAG 2 cut(s) 1130, 1193
SlaI CTCGAG 2 cut(s) 1130, 1193
SmiMI CAYNNNNRTG 1 cut(s) 35
SmlI CTYRAG 5 cut(s) 421, 487, 949, 1130, 1193
SmoI CTYRAG 5 cut(s) 421, 487, 949, 1130, 1193
SnaBI TACGTA 1 cut(s) 1268
SphI GCATGC 2 cut(s) 962, 1202
Sse9I AATT 8 cut(s) 16, 93, 393, 512, 668, 745, 764, 1207
SseBI AGGCCT 1 cut(s) 222
SsiI CCGC 1 cut(s) 266
SspI AATATT 3 cut(s) 697, 834, 1094
SstI GAGCTC 1 cut(s) 69
StuI AGGCCT 1 cut(s) 222
StyD4I CCNGG 2 cut(s) 319, 987
TaaI ACNGT 2 cut(s) 903, 930
TaiI ACGT 5 cut(s) 254, 446, 601, 773, 1270
TaqI TCGA 6 cut(s) 34, 282, 933, 1054, 1131, 1194
TasI AATT 8 cut(s) 16, 93, 393, 512, 668, 745, 764, 1207
TauI GCSGC 1 cut(s) 269
TfiI GAWTC 5 cut(s) 156, 569, 1056, 1343, 1369
Tru1I TTAA 9 cut(s) 21, 399, 440, 446, 507, 621, 767, 864, 1083
Tru9I TTAA 9 cut(s) 21, 399, 440, 446, 507, 621, 767, 864, 1083
TscAI CASTG 1 cut(s) 906
TseFI GTSAC 1 cut(s) 369
TseI GCWGC 5 cut(s) 42, 517, 678, 681, 849
Tsp45I GTSAC 1 cut(s) 369
TspDTI ATGAA 6 cut(s) 75, 155, 480, 618, 707, 1112
TspRI CASTG 1 cut(s) 906
Tth111I GACNNNGTC 1 cut(s) 983
Van91I CCANNNNNTGG 1 cut(s) 1111
VneI GTGCAC 1 cut(s) 380
XapI RAATTY 2 cut(s) 668, 1207
XceI RCATGY 2 cut(s) 962, 1202
XcmI CCANNNNNNNNNTGG 1 cut(s) 85
XhoI CTCGAG 2 cut(s) 1130, 1193
XmiI GTMKAC 1 cut(s) 739
XmnI GAANNNNTTC 1 cut(s) 30
Zsp2I ATGCAT 1 cut(s) 506
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.