Rh3DG214100

LRR-repeat protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0000155
Physical Location & Seq
Forward (+)
19765411 .. 19767706
2296 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG214100.1

Sequence Viewer

Length: 1584 bp
ATGTTGGCTTGTATAGTAGAAACTGAAATCGACTTTTCGTGCAAGCACAAAAGGATACGAGTTAGTTTCATGGAAGACAGGGGGAAGCGTAAGTTATTGGCTACTACTGCAAGTCGTCAAGGCCAAGCAGTTAGAGCTGCTACCGAGGGTTTGATTGATAGGCTGAGTAATCTTCCGGACCATGTGGCTCATCACATTCTTTCGTTCCTTGCTATTAAAGACCTTACTTGTTTCGGCTGTGTGTCCAAAAGATGCCGAGAATTTTATCTGTCAACTCCGTCATTGAATTTTGATGGATTTTCCTGGAAGGACTTACGGACTTATGATAAGAGGTTGAGGTTGTGGAGTTATTTGGATAGGTACTTGTTTCATCGTGGGGTTAATAGGATAGAGCGCTTTTGTATTTACTGGGAACTTTACTATGCGGACCAACAACAAAGCTTACGTGAAGATGAGAGATTTCGTTTGGACAAATGGATCTACAATGCCATAAGGTATAATGTTGAATTCCTTGACATCAAGTATTTGGGTTGGGAGGCACTGCCCTTTCCTCCTTGCGTCTTACTTAGTGGATCTTTGAAATCTCTGTCTGTGCATATGAATGGTATGATTTTTAAAGCACCCTCACTCGCTTCTTTCTCTAATCTGGAATGCTTGAAGTTGCGAGGTGTTATTCTAGTAGATGAGGGGCTTTTCAAATGGATCTCGTGTTCATGCAAATGCATTAAGGAATTGTCTCTTAAATATGTTTGTGGGAAGGGGACAAAGAATTTCACTATTGAAAGCACATCTTTGGAATCATTGTGCATTGAATGGGTTTCTAGTATCTGTTATCTTTACATTACCGGTGAGAAGCTTAGAAAAATAACTATCGACTGGAGATTTGGCTTACTTACAGACAAACCACATACAGATAAATCATTAAATATCTGTGCTCCGAATCTCAACAGTTTAAACTGGACCGGGAGTTTGATGAATCAGCCTAACCTTGGAAGATTAGAATGTTTAGAAGAAGCTAAGATTTGTCTTCTGCCTAGTGATGATGATTTTGTCTATGTATCTGAGGTTCTTTCCTGCTTATCCAGTGCTAAAGTTCTTACACTGAACGACGAGACTACGATGGTTCTGTTCAAGGGAGGTTCCATGCCATTGCTAAAGAATGTTTGTTATTTGTGTATTCATATTGAAGGCTTTCTTGATAATCTAGTCCCTGCAATGACCTCCCTTTTGGGAGGAATGTCTAAGTTGAGTACATTAATCATAAAGTCTGATTCATTCTTCTGTGGCCCTAAAGCTGATTGTCGTGGGTTTAATATGGGATACTGGAAGATGCAAAACACTGCTTTTATTTATCAGCTCAAGGAGGTTACCGTAGAGCTTACCCATGGGTCTAATGGAATCGAGTTTGCAAGATATATCCTTGAACACGCTCAGAATTTGAATAAAATGACACTTGTGCATCCACCACAGCTCTCTAATGCTATGAGGAAGTTAAAGAAAAGCAAGATGGCTTCCAACATCACACTGGACTTTCAGGAAGATCAAGAAAGAGGACCTCAGAAACGAAGAAGAAGGGTTGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
F-box F-box-like FBD

Protein Analysis

527

Amino Acids

60.56

Weight (kDa)

8.86

Isoelectric Point (pI)

41.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box PF00646 55 - 87 5.7e-07 F-box domain
LRR_At5g56370 PF24758 156 - 319 1.1e-06 FBD-associated F-box protein At5g56370, LRR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000155)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g20530 FvH4_5g20530 FvH4_5g20611 FvH4_5g20621 FvH4_5g26390 FvH4_5g26400 FvH4_5g26410 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_5g29160 FvH4_6g18920 FvH4_6g18920 FvH4_6g18920 FvH4_6g33960
malus_domestica MD04G1058800.v1.1 MD12G1025400.v1.1 MD14G1024100.v1.1 MD14G1026000.v1.1 MD14G1026300.v1.1 MD14G1026400.v1.1 MD14G1026600.v1.1
prunus_persica Prupe.7G107300_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108600_v2.0.a1 Prupe.7G108700_v2.0.a1
pyrus_communis pycom04g05270 pycom12g02490 pycom12g02500 pycom14g02340 pycom14g02540
rosa_chinensis RchiOBHm_Chr3g0473911 RchiOBHm_Chr3g0473951 RchiOBHm_Chr3g0473961 RchiOBHm_Chr3g0474091 RchiOBHm_Chr3g0474151 RchiOBHm_Chr3g0474171 RchiOBHm_Chr3g0475381 RchiOBHm_Chr3g0475391 RchiOBHm_Chr7g0193261 RchiOBHm_Chr7g0205891 RchiOBHm_Chr7g0205901 RchiOBHm_Chr7g0205931 RchiOBHm_Chr7g0205941 RchiOBHm_Chr7g0205961 RchiOBHm_Chr7g0217271 RchiOBHm_Chr7g0217281
rosa_laevigata RLG00000002499 RLG00000003343 RLG00000003344 RLG00000003345 RLG00000003348 RLG00000004282 RLG00000023847 RLG00000023943 RLG00000023945 RLG00000023951 RLG00000023964 RLG00000023965 RLG00000023969 RLG00000023971
rosa_multiflora Rmu_co8482831.1_g000001 Rmu_sc0000076.1_g000028 Rmu_sc0000076.1_g000030 Rmu_sc0000076.1_g000032 Rmu_sc0000076.1_g000033 Rmu_sc0002414.1_g000019 Rmu_sc0002414.1_g000037 Rmu_sc0003170.1_g000001 Rmu_sc0003170.1_g000026 Rmu_sc0004084.1_g000005 Rmu_sc0004084.1_g000006 Rmu_sc0004084.1_g000014 Rmu_sc0004507.1_g000027 Rmu_sc0005137.1_g000001 Rmu_sc0005137.1_g000022 Rmu_sc0005137.1_g000038 Rmu_sc0007659.1_g000002 Rmu_sc0010415.1_g000002 Rmu_sc0013923.1_g000002 Rmu_sc0015051.1_g000001 Rmu_sc0016637.1_g000001 Rmu_sc0016637.1_g000003 Rmu_sc0018174.1_g000001 Rmu_sc0033900.1_g000001
rosa_roxburghii Rroxscaffold_3G00242480 Rroxscaffold_3G00251850 Rroxscaffold_3G00251880 Rroxscaffold_3G00251890 Rroxscaffold_3G00262240 Rroxscaffold_6G00406350 Rroxscaffold_6G00407490 Rroxscaffold_6G00407590 Rroxscaffold_6G00407650
rosa_rugosa Rorug03G0136900 Rorug03G0136900 Rorug03G0136900 Rorug03G0137000 Rorug03G0137200 Rorug03G0137400 Rorug03G0138400 Rorug03G0138700 Rorug03G0138700 Rorug03G0139000 Rorug03G0139100 Rorug03G0148300 Rorug03G0148400 Rorug03G0148500 Rorug07G0008600 Rorug07G0093700 Rorug07G0093800 Rorug07G0093900 Rorug07G0094000 Rorug07G0167300
rosa_samantha Rh3AG187100 Rh3AG187500 Rh3AG188600 Rh3AG189500 Rh3AG198400 Rh3AG198500 Rh3AG198600 Rh3BG215700 Rh3BG215800 Rh3BG216000 Rh3BG218100 Rh3BG218700 Rh3BG228400 Rh3BG228500 Rh3BG228600 Rh3CG212400 Rh3CG212600 Rh3CG213800 Rh3CG214300 Rh3CG222900 Rh3DG211600 Rh3DG211900 Rh3DG212100 Rh3DG213900 Rh3DG214100 Rh3DG223700 Rh3DG223900 Rh7AG134200 Rh7AG225400 Rh7AG225500 Rh7AG225600 Rh7AG225700 Rh7AG306800 Rh7BG135200 Rh7BG221300 Rh7BG221400 Rh7BG221500 Rh7BG221700 Rh7BG221900 Rh7BG222300 Rh7BG225100 Rh7BG225200 Rh7BG297700 Rh7CG138200 Rh7CG239000 Rh7CG239200 Rh7CG239500 Rh7CG239800 Rh7CG240100 Rh7CG325900 Rh7DG232100 Rh7DG232300 Rh7DG306500
rosa_wichuraiana Rw0G012880 Rw0G012890 Rw3G017130 Rw3G017180 Rw3G017300 Rw3G017310 Rw3G018020 Rw7G011480 Rw7G019440 Rw7G019450 Rw7G019470 Rw7G026050

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccIII TCCGGA 1 cut(s) 175
AciI CCGC 1 cut(s) 425
AclWI GGATC 3 cut(s) 485, 580, 710
AcsI RAATTY 5 cut(s) 260, 286, 506, 769, 1435
AfaI GTAC 2 cut(s) 362, 1252
AfeI AGCGCT 1 cut(s) 395
AfiI CCNNNNNNNGG 1 cut(s) 989
AgeI ACCGGT 1 cut(s) 845
AjnI CCWGG 1 cut(s) 302
AloI GAACNNNNNNTCC 2 cut(s) 694, 726
AluBI AGCT 8 cut(s) 137, 441, 856, 1016, 1295, 1357, 1378, 1471
AluI AGCT 8 cut(s) 137, 441, 856, 1016, 1295, 1357, 1378, 1471
Alw21I GWGCWC 1 cut(s) 937
Alw26I GTCTC 2 cut(s) 741, 1106
AlwI GGATC 3 cut(s) 485, 580, 710
Aor13HI TCCGGA 1 cut(s) 175
Aor51HI AGCGCT 1 cut(s) 395
AoxI GGCC 2 cut(s) 121, 1285
ApeKI GCWGC 1 cut(s) 137
ApoI RAATTY 5 cut(s) 260, 286, 506, 769, 1435
ArsI GACNNNNNNTTYG 6 cut(s) 866, 898, 952, 984, 1210, 1242
AseI ATTAAT 1 cut(s) 1256
AsiGI ACCGGT 1 cut(s) 845
Asp700I GAANNNNTTC 1 cut(s) 1191
AspLEI GCGC 1 cut(s) 396
AspS9I GGNCC 5 cut(s) 178, 427, 960, 1286, 1553
AsuC2I CCSGG 1 cut(s) 964
AsuHPI GGTGA 1 cut(s) 860
AvaII GGWCC 4 cut(s) 178, 427, 960, 1553
BauI CACGAG 1 cut(s) 706
BbsI GAAGAC 2 cut(s) 81, 1019
Bbv12I GWGCWC 1 cut(s) 937
BbvI GCAGC 1 cut(s) 124
BccI CCATC 3 cut(s) 287, 1114, 1501
BciT130I CCWGG 1 cut(s) 304
BciVI GTATCC 2 cut(s) 48, 1313
BcnI CCSGG 1 cut(s) 964
BcoDI GTCTC 2 cut(s) 741, 1106
BfaI CTAG 4 cut(s) 677, 822, 1035, 1205
BfoI RGCGCY 1 cut(s) 397
BfuI GTATCC 2 cut(s) 48, 1313
BisI GCNGC 1 cut(s) 138
BlsI GCNGC 1 cut(s) 139
Bme1390I CCNGG 2 cut(s) 304, 964
Bme18I GGWCC 4 cut(s) 178, 427, 960, 1553
BmgT120I GGNCC 5 cut(s) 178, 427, 960, 1286, 1553
BmiI GGNNCC 1 cut(s) 1141
BmrFI CCNGG 2 cut(s) 304, 964
BmrI ACTGGG 1 cut(s) 418
BmsI GCATC 3 cut(s) 242, 1320, 1468
BmuI ACTGGG 1 cut(s) 418
BpiI GAAGAC 2 cut(s) 81, 1019
BpmI CTGGAG 1 cut(s) 898
BpuEI CTTGAG 1 cut(s) 1343
BpuMI CCSGG 1 cut(s) 964
BsaAI YACGTR 1 cut(s) 446
BsaJI CCNNGG 3 cut(s) 144, 988, 1384
BsaWI WCCGGW 2 cut(s) 175, 845
Bsc4I CCNNNNNNNGG 1 cut(s) 989
Bse118I RCCGGY 1 cut(s) 845
Bse1I ACTGG 6 cut(s) 413, 881, 962, 1083, 1328, 1530
Bse3DI GCAATG 2 cut(s) 1148, 1221
BseAI TCCGGA 1 cut(s) 175
BseBI CCWGG 1 cut(s) 304
BseDI CCNNGG 3 cut(s) 144, 988, 1384
BseGI GGATG 1 cut(s) 1459
BseLI CCNNNNNNNGG 1 cut(s) 989
BseMI GCAATG 2 cut(s) 1148, 1221
BseMII CTCAG 4 cut(s) 155, 1053, 1445, 1571
BseNI ACTGG 6 cut(s) 413, 881, 962, 1083, 1328, 1530
BseXI GCAGC 1 cut(s) 124
BshFI GGCC 2 cut(s) 123, 1287
BshTI ACCGGT 1 cut(s) 845
BsiHKAI GWGCWC 1 cut(s) 937
BsiSI CCGG 3 cut(s) 176, 846, 963
BslFI GGGAC 2 cut(s) 775, 1193
BslI CCNNNNNNNGG 1 cut(s) 989
BsmAI GTCTC 2 cut(s) 741, 1106
BsmFI GGGAC 2 cut(s) 775, 1193
BsmI GAATGC 1 cut(s) 656
BsnI GGCC 2 cut(s) 123, 1287
Bsp1286I GDGCHC 1 cut(s) 937
Bsp13I TCCGGA 1 cut(s) 175
Bsp143I GATC 4 cut(s) 477, 572, 702, 1540
Bsp19I CCATGG 1 cut(s) 1384
BspACI CCGC 1 cut(s) 425
BspANI GGCC 2 cut(s) 123, 1287
BspCNI CTCAG 4 cut(s) 156, 1054, 1444, 1570
BspEI TCCGGA 1 cut(s) 175
BspLI GGNNCC 1 cut(s) 1141
BspPI GGATC 3 cut(s) 485, 580, 710
BsrDI GCAATG 2 cut(s) 1148, 1221
BsrFI RCCGGY 1 cut(s) 845
BsrI ACTGG 6 cut(s) 413, 881, 962, 1083, 1328, 1530
BssAI RCCGGY 1 cut(s) 845
BssECI CCNNGG 3 cut(s) 144, 988, 1384
BssMI GATC 4 cut(s) 477, 572, 702, 1540
BssSI CACGAG 1 cut(s) 706
BssT1I CCWWGG 2 cut(s) 988, 1384
Bst2BI CACGAG 1 cut(s) 706
Bst2UI CCWGG 1 cut(s) 304
Bst4CI ACNGT 2 cut(s) 950, 1372
BstBAI YACGTR 1 cut(s) 446
BstC8I GCNNGC 1 cut(s) 44
BstDEI CTNAG 8 cut(s) 164, 566, 857, 1017, 1062, 1242, 1431, 1557
BstDSI CCRYGG 1 cut(s) 1384
BstEII GGTNACC 1 cut(s) 1366
BstF5I GGATG 1 cut(s) 1459
BstH2I RGCGCY 1 cut(s) 397
BstHHI GCGC 1 cut(s) 396
BstKTI GATC 4 cut(s) 480, 575, 705, 1543
BstMAI GTCTC 2 cut(s) 741, 1106
BstMBI GATC 4 cut(s) 477, 572, 702, 1540
BstMWI GCNNNNNNNGC 2 cut(s) 107, 134
BstNI CCWGG 1 cut(s) 304
BstPI GGTNACC 1 cut(s) 1366
BstSCI CCNGG 2 cut(s) 302, 962
BstV1I GCAGC 1 cut(s) 124
BstV2I GAAGAC 2 cut(s) 81, 1019
BstX2I RGATCY 3 cut(s) 477, 572, 702
BstYI RGATCY 3 cut(s) 477, 572, 702
BsuI GTATCC 2 cut(s) 48, 1313
BsuRI GGCC 2 cut(s) 123, 1287
BtgI CCRYGG 1 cut(s) 1384
BtsCI GGATG 1 cut(s) 1459
BtsI GCAGTG 2 cut(s) 539, 1338
BtsIMutI CAGTG 5 cut(s) 539, 1090, 1100, 1338, 1523
Cac8I GCNNGC 1 cut(s) 44
CfoI GCGC 1 cut(s) 396
Cfr10I RCCGGY 1 cut(s) 845
Cfr13I GGNCC 5 cut(s) 178, 427, 960, 1286, 1553
CseI GACGC 1 cut(s) 547
Csp6I GTAC 2 cut(s) 361, 1251
CspAI ACCGGT 1 cut(s) 845
CviAII CATG 5 cut(s) 70, 182, 714, 1144, 1385
CviQI GTAC 2 cut(s) 361, 1251
DdeI CTNAG 8 cut(s) 164, 566, 857, 1017, 1062, 1242, 1431, 1557
DpnI GATC 4 cut(s) 479, 574, 704, 1542
DpnII GATC 4 cut(s) 477, 572, 702, 1540
DraI TTTAAA 2 cut(s) 616, 954
Eco130I CCWWGG 2 cut(s) 988, 1384
Eco47I GGWCC 4 cut(s) 178, 427, 960, 1553
Eco47III AGCGCT 1 cut(s) 395
Eco91I GGTNACC 1 cut(s) 1366
EcoO109I RGGNCCY 1 cut(s) 1553
EcoO65I GGTNACC 1 cut(s) 1366
EcoRI GAATTC 1 cut(s) 506
EcoRII CCWGG 1 cut(s) 302
EcoT14I CCWWGG 2 cut(s) 988, 1384
EcoT22I ATGCAT 1 cut(s) 725
ErhI CCWWGG 2 cut(s) 988, 1384
FaeI CATG 5 cut(s) 73, 185, 717, 1147, 1388
FalI AAGNNNNNCTT 4 cut(s) 775, 807, 1179, 1211
FaqI GGGAC 2 cut(s) 775, 1193
FatI CATG 5 cut(s) 69, 181, 713, 1143, 1384
FauNDI CATATG 1 cut(s) 597
Fnu4HI GCNGC 1 cut(s) 138
FokI GGATG 1 cut(s) 1446
Fsp4HI GCNGC 1 cut(s) 138
FspBI CTAG 4 cut(s) 677, 822, 1035, 1205
GlaI GCGC 1 cut(s) 395
GluI GCNGC 1 cut(s) 138
GsuI CTGGAG 1 cut(s) 898
HaeII RGCGCY 1 cut(s) 397
HaeIII GGCC 2 cut(s) 123, 1287
HapII CCGG 3 cut(s) 176, 846, 963
HgaI GACGC 1 cut(s) 547
HhaI GCGC 1 cut(s) 396
Hin1II CATG 5 cut(s) 73, 185, 717, 1147, 1388
Hin6I GCGC 1 cut(s) 394
HinP1I GCGC 1 cut(s) 394
HincII GTYRAC 1 cut(s) 273
HindII GTYRAC 1 cut(s) 273
HindIII AAGCTT 2 cut(s) 439, 854
HinfI GANTC 5 cut(s) 797, 940, 976, 1271, 1398
HpaII CCGG 3 cut(s) 176, 846, 963
HphI GGTGA 1 cut(s) 860
Hpy166II GTNNAC 1 cut(s) 273
Hpy188I TCNGA 6 cut(s) 939, 1063, 1270, 1434, 1560, 1583
Hpy188III TCNNGA 5 cut(s) 176, 647, 1196, 1535, 1544
Hpy8I GTNNAC 1 cut(s) 273
Hpy99I CGWCG 1 cut(s) 1112
HpyAV CCTTC 4 cut(s) 301, 751, 1181, 1566
HpyCH4III ACNGT 2 cut(s) 950, 1372
HpyCH4IV ACGT 1 cut(s) 445
HpyF10VI GCNNNNNNNGC 2 cut(s) 107, 134
HpyF3I CTNAG 8 cut(s) 164, 566, 857, 1017, 1062, 1242, 1431, 1557
HpySE526I ACGT 1 cut(s) 445
Hsp92II CATG 5 cut(s) 73, 185, 717, 1147, 1388
HspAI GCGC 1 cut(s) 394
Kpn2I TCCGGA 1 cut(s) 175
Kzo9I GATC 4 cut(s) 477, 572, 702, 1540
LmnI GCTCC 1 cut(s) 940
Lsp1109I GCAGC 1 cut(s) 124
LweI GCATC 3 cut(s) 242, 1320, 1468
MaeI CTAG 4 cut(s) 677, 822, 1035, 1205
MaeII ACGT 1 cut(s) 445
MaeIII GTNAC 1 cut(s) 1366
MalI GATC 4 cut(s) 479, 574, 704, 1542
MboI GATC 4 cut(s) 477, 572, 702, 1540
MflI RGATCY 3 cut(s) 477, 572, 702
MhlI GDGCHC 1 cut(s) 937
MluCI AATT 6 cut(s) 260, 286, 506, 731, 769, 1435
MmeI TCCRAC 1 cut(s) 1539
Mph1103I ATGCAT 1 cut(s) 725
MroI TCCGGA 1 cut(s) 175
MroXI GAANNNNTTC 1 cut(s) 1191
MslI CAYNNNNRTG 2 cut(s) 600, 718
MspI CCGG 3 cut(s) 176, 846, 963
MspR9I CCNGG 2 cut(s) 304, 964
MssI GTTTAAAC 1 cut(s) 954
Mva1269I GAATGC 1 cut(s) 656
MvaI CCWGG 1 cut(s) 304
MwoI GCNNNNNNNGC 2 cut(s) 107, 134
NciI CCSGG 1 cut(s) 964
NcoI CCATGG 1 cut(s) 1384
NdeI CATATG 1 cut(s) 597
NdeII GATC 4 cut(s) 477, 572, 702, 1540
NlaIII CATG 5 cut(s) 73, 185, 717, 1147, 1388
NlaIV GGNNCC 1 cut(s) 1141
NmeAIII GCCGAG 1 cut(s) 281
NsiI ATGCAT 1 cut(s) 725
PctI GAATGC 1 cut(s) 656
PdmI GAANNNNTTC 1 cut(s) 1191
PfeI GAWTC 5 cut(s) 797, 940, 976, 1271, 1398
PfoI TCCNGGA 1 cut(s) 302
PinAI ACCGGT 1 cut(s) 845
PkrI GCNGC 1 cut(s) 139
PmeI GTTTAAAC 1 cut(s) 954
Ppu21I YACGTR 1 cut(s) 446
PpuMI RGGWCCY 1 cut(s) 1553
PshBI ATTAAT 1 cut(s) 1256
Psp5II RGGWCCY 1 cut(s) 1553
Psp6I CCWGG 1 cut(s) 302
PspEI GGTNACC 1 cut(s) 1366
PspGI CCWGG 1 cut(s) 302
PspN4I GGNNCC 1 cut(s) 1141
PspPI GGNCC 5 cut(s) 178, 427, 960, 1286, 1553
PspPPI RGGWCCY 1 cut(s) 1553
PsrI GAACNNNNNNTAC 2 cut(s) 1050, 1082
PsuI RGATCY 3 cut(s) 477, 572, 702
RsaI GTAC 2 cut(s) 362, 1252
RsaNI GTAC 2 cut(s) 361, 1251
RseI CAYNNNNRTG 2 cut(s) 600, 718
SatI GCNGC 1 cut(s) 138
Sau3AI GATC 4 cut(s) 477, 572, 702, 1540
Sau96I GGNCC 5 cut(s) 178, 427, 960, 1286, 1553
ScrFI CCNGG 2 cut(s) 304, 964
SduI GDGCHC 1 cut(s) 937
SfaNI GCATC 3 cut(s) 242, 1320, 1468
SinI GGWCC 4 cut(s) 178, 427, 960, 1553
SmiMI CAYNNNNRTG 2 cut(s) 600, 718
SmlI CTYRAG 1 cut(s) 1358
SmoI CTYRAG 1 cut(s) 1358
Sse9I AATT 6 cut(s) 260, 286, 506, 731, 769, 1435
SsiI CCGC 1 cut(s) 425
SspMI CTAG 4 cut(s) 677, 822, 1035, 1205
StyD4I CCNGG 2 cut(s) 302, 962
StyI CCWWGG 2 cut(s) 988, 1384
TaaI ACNGT 2 cut(s) 950, 1372
TaiI ACGT 1 cut(s) 448
TaqI TCGA 3 cut(s) 30, 873, 1401
TasI AATT 6 cut(s) 260, 286, 506, 731, 769, 1435
TatI WGTACW 1 cut(s) 1250
TfiI GAWTC 5 cut(s) 797, 940, 976, 1271, 1398
TscAI CASTG 5 cut(s) 546, 1090, 1107, 1345, 1530
TseI GCWGC 1 cut(s) 137
TspDTI ATGAA 7 cut(s) 58, 359, 614, 702, 989, 1169, 1263
TspGWI ACGGA 2 cut(s) 267, 331
TspRI CASTG 5 cut(s) 546, 1090, 1107, 1345, 1530
VpaK11BI GGWCC 4 cut(s) 178, 427, 960, 1553
VspI ATTAAT 1 cut(s) 1256
XapI RAATTY 5 cut(s) 260, 286, 506, 769, 1435
XcmI CCANNNNNNNNNTGG 2 cut(s) 1391, 1522
XmnI GAANNNNTTC 1 cut(s) 1191
XspI CTAG 4 cut(s) 677, 822, 1035, 1205
Zsp2I ATGCAT 1 cut(s) 725
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.